gi|00000000|ref|CP002697.1|  Buchnera aphidicola str. USDA (Myzus persicae), complete genome. 643504, gc%: 25.44%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
58405..59229                       PHAGE_Strept_9871_NC_031069: hypothetical protein; BUMPUSDA_CDS00535; phage(gi100019)     2.56e-09            MSFSESSKIWNKIVYQVSCSLKKEPILSDFYQNSVLQHNNLLDSLSYILANKLSTSSISEKKMQIIFHDIYIHNSSLLNFIVKDINAILSRDPVVTDYLTPLLYLKGFHALEAYRLSHHLWNTKKKSLSIYLQNRISTVFSVDIHPAACIGSGVMLDHATGIVIGESAIIEDNVSIFHSVTLGGTGKNNSKNRHPTIRKEVVIGAGAKILGNIEVGFGAKIGAGSIVVKNVPSNVTVVGIPARIVNSIGNNKFSSKEEKNNLFYIHGFQYGDGI
complement(59323..61164)           PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; BUMPUSDA_CDS00534; phage(gi331028036)     5.02e-38            MDQQNPQSQLKLLVTHGKEQGYLTYAEVNDHLPEEIIDSEQIDDIIQMINDMGIPVVEEAPDADDLILNEINTDTDEDAVEAATQVLSSVESELGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEEGINQVQCSVSEYPEAITYLLEQYDRIKTGQIRLSDIITGFVDPNAEEIFSPTAIHIGSELLDEEQSSEEDEENNQDDNEDDHSIDPELANEKFSELRIQYHNTNNTIKNKKRTHKDSLLEIYHLSEVFKQFRLVPKQFDHLVNNMRNMMERVRKQEKIIMKLCVEKCNMPKENFIKIFSGNEVNNSWFIKEQNKNQPWSKNLIKIKDSVLSSMQKLIEIEEETGLTIEQVKDINKRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEIGREPTPEELSEKMLIPEDKIRKVLKIAKEPISMETPVGDDDDSHLGDFIEDTTLELPLDSATSESLRSATHDVLSGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEILRSFLDD
complement(61290..63029)           PHAGE_Helico_phiHP33_NC_016568: DNA primase; BUMPUSDA_CDS00533; phage(gi371671350)     3.16e-37            MSGKIPKSFITELLFRTNIVELINTRIKLKKYGKNYQTNCPFHHDKTPSFTVSNEKQFYYCFGCNAHGNAIDFLINYEHLSFIESIEELSMIHGMQIPFENTKKNNHYNKKQNLYLLMEKMCKLYQKNIIFTNLAHQYLAKRGINKKMIDFFLIGFSSLQWKNFYKKLDISKKLEQKLLHYNIISISEKGYKYDRFQGRIIFPIQDHHGRIVGFGSRAINNIFPKYLNSPETDIFHKGKHIYGLYQVKKKCNQPKYLLVVEGYIDVITLTQYNINYVVSSLGTATTNEHIQILFQNTDVVIYCYDGDDAGKNAAWRILKKSLPHITDKKTLKFILLPNNEDPDSIIRKEGTEAFQKRIDNAITLPKFFFRCLLKNVNLSSNDDKFYLSSRALPLINNISSDTVRIYLRQILARMIGILDDHQFEKFLYEKEIKKNEQSKQFQIKRTSMRTLIALLIQNPILSKVAPSVIKFKNFKLKGLPIFLEILQTCINNPNISTGQLLELYRNSKIINILKILSSWDHMIVQEEIQNMFLDLLMNIYDRILQERQEYLISKERKTGLTLTEKKEIWSINKALSKNK
complement(63105..63320)           PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; BUMPUSDA_CDS00532; phage(gi460042545)     1.47e-05            MPIIKVRENEPFDVALRRFKRSCEKAGILAEIRRREFYEKPTTERKRAKASAVKRLAKKLTRENARRIRMY
63499..64503                       PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; BUMPUSDA_CDS00531; phage(gi16130960)     6.60e-143           MKILGIETSCDDTGIALYDSDKGLLINKIYNQKKLHNIYGGIVPELASREHMKAIISLLKQTFRKKNMIEDINLIAYTAGPGLVGSLLVGATFACSLGLSLNIPVLPVNHMEAHLLSPMLEFKSIKFPFIALLVSGKHTQIIAAYELGKYEILGNCLDDAAGEAFDKTANLLGLSYPGGVQLSKLASQGIKDYFYFPRPMINHPGLNFSFSGLKTFTAQIINKCGQSIQEKANIARAFEDAVIDILLIKTKKALKEKKWKRLIIAGGVSANYLLRKKSEQMMEKYFNGKVFYSSVKFCTDNGAMIAYLGFLRYLEARDSQLEILVKPKWSISDL
complement(64539..65177)           PHAGE_Synech_S_SKS1_NC_020851: 3,4-dihydroxy-2-butanone 4-phosphate synthase; BUMPUSDA_CDS00530; phage(gi472340887)     1.05e-43            MNQTLLYEFGTPIERIKKAIFALQSGQGIIILDDEKRENEGDLVFACENMTVEQMALTIRYGSGIVCLCITESRRKKLNLPMMVKKNTSKYRTGFTVTIEASKGVSTGVSAQDRLTTIKTAIADNAKPSDLNRPGHVFPLRADSGGILARAGHTEAAIEIVSLAGFKPAGVICELTNKDGTMARTNEIIKFSKNNNMQVLTIQDIIFYVKNT
complement(65419..66366)           PHAGE_Synech_S_CAM1_NC_020837: hypothetical protein; BUMPUSDA_CDS00529; phage(gi472339598)     5.79e-14            MKKKFIDFNNSLVLVVGDLILDCYWYSKNYSILSEKSIPIVKINKVKKQPGGAANVAKNIAEIGGSSKIIGFIGVDDEGLILKKLLHHIRIDCDLIPIKKNKTITKIRILSENKQLIRIDFQEKYIAKQNDLLYQKIINSLPYFKILILSDYEKGTLFHIKKIINLAKKMSIPILVDPKGIDFTKYSGASLLTPNLAEFEKIVGKCYKEQEILQRGIKLLSELKLSALLITRSHHGMTLFQNKKKPIHFPAISKTACDVTGAGDTVIAIIAASLAKGYSLEEACFYANIGASIVIKKIGTETLTINELNFKLCFK
66582..67820                       PHAGE_Cronob_vB_CsaM_GAP31_NC_019400: tRNA nucleotidyltransferase; BUMPUSDA_CDS00528; phage(gi414086769)     1.88e-61            MKIYLVGGAVRDSLLNLPIKDRDWVVVGATKQMLLEKNFQPVGKDFPVFLHPETHEEYALARKERKSGKGYTGFYTDSNSSVTLEDDLIRRDLTMNAIAEDQDGNHIDPFKGKKDIQCRLIRHVSEAFIEDPLRVLRTARFAASLIHLGFQIAKETMELMSIVVRKKELLYLTANRIWNETEKAFKTYNPHVYFQVLYSCKALQLFFPKMYFFYERDIFLKNNLLKKICNKDNILMGLAKISNFEKNVDIRFAYLCQFLSINQLFFFPSKIFYDTNSVSIVQSLCKSFHIPSSIRDIAVLNTGFYIFLKTIQSQSSKNIVRLFYKIDAWRKPDRIKKLAFLNDFNFLNQISTKLISFKSGCFLKKCFSIVKNVSIQLILDKGFKGNEIKDELMRIRIKKLQLWRLKNFKSHI

#### region 2 ####
595030..595674                     PHAGE_Prochl_P_SSM2_NC_006883: orotate phosphoribosyltransferase; BUMPUSDA_CDS00046; phage(gi61805915)     9.89e-09            MNWKKEFIDFSFKKKALKFGSFILKSGRTSPYFFNSGLLSSGKDIIKIGVLYAHSIIDSKIEFDILFGAAYKGIPIVVATSIALKNFYNLNIPYVFNRKEKKKYGEKGDLIGQKIQNKKIIILDDVVTSGTAIHYSINILEEKKAHISSIFVLLDRKEKGKRNLHTIHHLKNKNSYKINSIITIEDLISYLLEENKLKKHVPELIKYREKYGIY
complement(595691..596149)         PHAGE_Salmon_SP_058_NC_021772: deoxyuridine 5'-triphosphate nucleotidohydrolase; BUMPUSDA_CDS00045; phage(gi526003472)     4.24e-54            MMNNIKVKILNLHGKKNFSLPTYSTSGSSGLDLRACLEKKIKLKANETILIPTGIAIYIENPYITAIILPRSGLGHKKGIVLGNLVGLIDSDYQGQLMVSLWNRSQKDFYVNPSDRVAQIVFIPIIKPCFSVVEEFDLTKRAEKGFGHSGVS
complement(596194..596943)         Cysq; BUMPUSDA_CDS00044                                                              N/A                 MLNKVCKLARHAGSVIMKFYNSKESINVAYKLDNTPITNVDHEAHNIIKKGLFSINPNIPIISEEEIYNLDFCRHWKRYWLIDPLDGTKEFLKKNGEFTVNISLIEDDIPVLGVIYAPFFDVLYSSYKQKAWKEKKIGIKEKITVSHSKYLVIITSRSHPDKELKDYLANIKDYQLKSLGSSLKFCLIAEGIGQIYPRFGNTNIWDTAAGHAIVVAAGGKVQTWQGVELNYSLSSRSSFLNPGFCVSVF
complement(596989..597441)         Rpli; BUMPUSDA_CDS00043                                                              N/A                 MEVILLCQIRKLGSSGSIINVKSGYARNFLIPKGKAILANKKNVESFEAQRIELEKENTSKLLIAQTRAEKIKNIKSITIFSKVGKEGKIFGSVGIRNILKEMISLGVKINKKEIRLPNGLLRKVGEHQVIFQPHNEIQVSFIVNIISKN
complement(597487..597714)         Rpsr; BUMPUSDA_CDS00042                                                              N/A                 MARYFRRRKFCRFTAENIQEIDYKDIAILKNYITESGKIVPSRITGTRAKYQRQLSRAIKRARYLALLPYTDQHH
complement(597819..598160)         Rpsf; BUMPUSDA_CDS00041                                                              N/A                 MRHYEIIFMIHPDQSDQVPSLIEKYKKIIHQNSGIVHRLEDWGRRQLSYSINKLHKAHYILMNIEVLPQTINILETEFRFNNFILRNIIICMKNAITELSPIMKLKDDKKEKK
complement(598332..600506)         PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; BUMPUSDA_CDS00040; phage(gi115304286)     7.22e-61            MVVDPYQKREAKKYKNSIPSREYISSWLKKCQDLISQKKIERKFGIIHQEEKKALRRRLRAMERDGQIIYTKNRCYINPDNIKVVQGKVIGHKDGYGFLRIETSQDDLWLSSEQMKFCIHGDVILAYIVNSDRKGRNSAKFLKILKANDSLIVGRYFSKNKIKFVVPDDTRFNFKILIFSHRENISIGSIVVVKLKKHPTRNNKAEGLIVEVLGKEMGTNLAIDIALRKHSIPSFWSEDAQKQLSQISHKINLCDFKNRIDMRHIPFFTIDDEDARDFDDAVFCKKKNNSEEGWNLLVAIADVSYYVKPNTALDKAALERGTSVYFPSLVVPMLPEKISTDLCSLNPFKERLCLICEMNLSNTGELISYKHYEAVICSHGRFTYNEIFKIWNGDIFLRSKYKKFLKDIENLSYLQKVFNRDNISKKGIYFENIVAKFVLDSNLRIKNIYQDIRNDAHKFIESCMILANIASASFVQKYNHPVLFRNHNPPKKNNIVTFRSFLKELGLSLLGGEIPESIHYSNLLKNISNRPEYEMIQTILLRSMQQAVYSPNNCGHFGLSLYSYVHFTSPIRRYPDLVLHRVIKCLLSEKKSLSYKDCDSCLYNIFEMKKIGQHCSMTERRADEANRDVIDWLKCDFMYKKIGDIFTGVISNVTSFGFFVRLNQFFIEGLVRIASLEDDYYYFDALGLKLIGKSNKNTYCLGDILKVKVYSVNLNERKIELSLI
complement(600563..601852)         PHAGE_Mycoba_LinStu_NC_023714: gp260; BUMPUSDA_CDS00039; phage(gi593776966)          8.64e-22            MKKNIVILGTQWGDEGKGKIVDSLTQDSAYVVRYQGGHNAGHTLVVNGEKIILHLIPSGILHDNVIGIIANGVVVSPLELMKEIKMLEKRSISINNRLILSHASPLILQYHIDMDVAREKKLGINALGTTGRGIGPAYEDKVARRALRLSDLKDEKKLAIRLEKIVDYYNHQLVSFYHQKSIDYKIILRDLLPTIDFLYDMIQDTTAILHQAIADKKKIVFEGAQGSFLDIDHGTYPYVTSSNSTIGGVITGTGVGPKNLDYILGVTKAYSTRVGYGPFPSELFNNIDKHLSHKGNEFGSTTGRKRRTGWLDTVSLCRAVKINSLSALCITKLDVLDGLDEIKICISYKNNHTSEIIKYPSIDDWENITPIYEIHPGWKKKTLGIKKLEDLPYAARNYISRIEEITQIPIDLISTGPDRFDIIFINSYN
complement(601905..602834)         PROPHAGE_Escher_Sakai: FtsH protease regulator HflC; BUMPUSDA_CDS00038; phage(gi15834405)     9.13e-150           MRKVLICLSSILFFLFSSSFFIVKEGERGIVLQFGRVLRNNEQKTLVYTPGLHFKFPFLETVKMLDARIHTMDNQADRFVTKEKKDLIVDSYIKWRINDFSRYYLATGGGDIFQAEVLLKRKFSDRLRSEIGCLNVKEIVTDSRGRLTTDVLNSLNRGTINLENTSLINVNSMNALGIQVVDVRIKQINLPVEVSDAIYNRMRAEREAVARSQRSQGQEKAEKLRATADYKVSIILSEAKKEALIIKGKGEAKVTKIFAENFSKEPYFYYFIRSLRAYENSFKKNENLMLLSSDSEFFKYINKMIAIEK
complement(602837..604057)         PROPHAGE_Escher_Sakai: FtsH protease regulator HflK; BUMPUSDA_CDS00037; phage(gi15834404)     5.15e-146           MVWNKPNDNKPELDPWGDKNSDNKNRPDNKNQKKINRLDIKYFFCYIKNIFINTTHSSVPPKKSIHPLIIISCISFFIWSMSGFYTIKEAERGVVTSFGKFSYLVQPGLNWRPIFINEVKAVNVETVRELATSGVMLTSDENVVHVEMNVQYKITNPADYLFSVCYPDDSLRQATDSALRGVIGHSTMDRVLTEGRTLVRSDTQKVIEETIKPYKMGITILDVNFQTARPPEEVKAAFDDAIAARENREQYVREAEAYSNEVEPKAYGQAQRILEEARAYSSRIILEAQGEVDRFSKILPEYRKAKKITLKRLYIESMERLLSKNKKIFIDKKNSAIFFVTLDKFFSNMKSINKKTIKNITFNENNPYSVKKDKSIDYFPSLSPKSVLEQRRINSIRSDLKNSERK
