gi|00000000|ref|CP002730.1|  Escherichia coli UMNK88 plasmid pUMNK88_K88, complete sequence. 81883, gc%: 49.47%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(12819..13265)           PROPHAGE_Escher_EDL933: IS629 transposase; UMNK88_pK8816; phage(gi15803526)          2.48e-98            EscherichiacoliUMNK88MAFIIDVFAGVIVGWRVSSSMKTTFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYTQRLKDAELLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGQLGHIPPAEAEKAYYASIGNGDLAA
complement(13382..14740)           PHAGE_Pseudo_phi3_NC_030940: protector from prophage-induced early lysis; UMNK88_pK8817; phage(gi100001)     4.31e-48            EscherichiacoliUMNK88MNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEGDLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQAEAIREECRGVLEGSLKLRLNMDKTKITHVNDGFIFLGHRIIRKRSRYGEMRVVSTIPQEKARNFAASLTALLSGNYSESKVDMAEQLNRKLKGWAMFYQFVDFKAKVFSYIDRVVFWKLAHWLARKYRTGIASLMRWWCKSPKPGQSKTWVLFGKTNHGKLSGEILYRLVGQGKKLFRWRLPEGNPYLRTETRNTYTSRFTEVAMAFASI
complement(14938..15366)           PROPHAGE_Escher_MG1655: IS186 transposase; UMNK88_pK8818; phage(gi90111427)          7.27e-96            EscherichiacoliUMNK88MIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN
complement(15386..15994)           PROPHAGE_Escher_MG1655: IS186 transposase; UMNK88_pK8819; phage(gi90111427)          1.33e-142           EscherichiacoliUMNK88MPMNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLR
16147..16572                       conserved hypothetical protein; UMNK88_pK8820                                        N/A                 EscherichiacoliUMNK88MTAHVASLRCISLIIKGLHLVRSVNSRRKHIQTASLRHVMGFPHRGLLRKLRQPARHRSHAPLTSVADLPRFTCLDSGILRRLPVALFILACRKLAEVSNASVIDAAAPVFRIHVKTPSTGSAYVSLPVPPARPVRSRRPW
16824..17192                       conserved hypothetical protein; UMNK88_pK8821                                        N/A                 EscherichiacoliUMNK88MPALNSGHTIREVSHPQLVGAFCHELAVHPVTRSGFFPADCGADLFTPAHTGKPHHLHQPFYCASGYGHPLTQQLAPDLAHTVHAVVYIVHALYLRLQQVITLCPLTAFIRMPLMRTMPVIR
17132..18151                       PHAGE_Entero_If1_NC_001954: hypothetical protein; UMNK88_pK8822; phage(gi9630756)     2.56e-114           EscherichiacoliUMNK88MPADCVYPDAVDAHDAGNTLTGRQPARGIPVRPRAYHAGYPPEALFFPQAVELRLRKIRGSLAQDIVAAAQFAVFTLQFLQTLAFCGAQSAVTCTGIALILTQPGTQGLRRTADFRGDGADGRPLRVIVILAFDNHTNGSLTDLRGKAHIFSHPVYLSLKEFSLQDSRGDSQCLHSRIANIRRDYLHKVTTTISKNHAMIVIEDLKVSNMSKSTAGTVSQPGRNVRAKSGLNRSILDQGWYEMRRQLEYKQLWRGGQVLAVPPAYTSQRCACCGHTAKENRLTQSKFVCRACGYTANADVNGARNILAAGHAVLACGGTVQSGRPLKQEPDAEQSAVTH
18151..19164                       PHAGE_Stx2_c_1717_NC_011357: transposase; UMNK88_pK8823; phage(gi209447153)          5.19e-144           EscherichiacoliUMNK88MGIPLLSHEVRRWGRMSMYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYRYVMNTFKLHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLRPFRGILQADAFNGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHDIRGLPVSERLAVRQMQSRPLLTSMYKLMQEKEHTLSKKCRLGDAFRYIRKHWAALCNFCDDGLAEVDNNAAERALRAVCLGKKNYVFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVALTNK

#### region 2 ####
24496..25410                       PHAGE_Escher_ECML_117_NC_025441: putative 3-oxoacyl-(acyl-carrier-protein) reductase; UMNK88_pK8827; phage(gi725950210)     3.97e-07            EscherichiacoliUMNK88MFFFALCAKLSATYEVITNMDILVFIAVKYNYFTEWRNYSGYRKKVAIITGAGQGIGRAIARRLAKDGFRIGCLDFNEDTAQETVNLIEAEGGEALAVEVDVSCREQVFSAVDQVAVKFGRVDIMVNNAGLGPTTPLEDITPELYRKVFDVNVGGVYWGIQAVLKHIRKRTPQREGEIVGKIINASSQAGQVGNPDLAVYGATKFAIRGITQTAARDLAKSGITVNAYCPGIVRTPMMEGIARKVADENGQDLEWGLQQWAKNVALGRISEPDDVAACVSYLASADSDYMTDQSLIIDGGMVFN
26016..26663                       PHAGE_Stx2_c_1717_NC_011357: truncated transposase; UMNK88_pK8828; phage(gi209447151)     9.31e-20            EscherichiacoliUMNK88MNARKAVLADNPELILRVLQLRFDESLSYPRISAQTGISKTAIFSLVRRFHQVFTDWPLSGEYSCGQLARALFPGRYPSAPTVTQPVKAEKPRRNRFSPEFKWRLVQQTLLPGACVAQIARENGINDNLLFNWRHLWRNGGLQPPGEHETSLLPVTLTPEPDNKIPDPVQVEQINTPTDSLCCELVLPAGTLRLKGELTPALLQSLIREMKGSSH
26663..26974                       PHAGE_Stx2_c_1717_NC_011357: transposase; UMNK88_pK8829; phage(gi209447152)          4.02e-54            EscherichiacoliUMNK88MISLPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLFIFRGRRGDQIKVLWADSDGLCLFTKRLERGRFVWPVTRDGKVHLTPAQLSMLLEGINWV
27572..28495                       PHAGE_Pseudo_phi3_NC_030940: protector from prophage-induced early lysis; UMNK88_pK8830; phage(gi100001)     3.88e-114           EscherichiacoliUMNK88MSTHCRVSSATHGSHWHLINWRYCHRRVKKLQLRIAKATQEQQWRKVKALQRMLTRSFSAKALAVKRVTENTGRKTPGVDGEIWQHPESKWSAITRLKRSGYHPLPLRRIYIPKANGKFRALGIPTMLDRAMQALYLMALEPLSEITADHHSYGFRPMRSTADAIEQVFNACGKKASAEWILEGDIRGCFDNLSHEWLVSHIPMDRMVLRNWLKSGYCEGMSFYPTKGGTPQGGIISPTLMNMALDGLQSLLERRFPSTTVQGRKAKIHLVRYADDFVITGATAELLRNDVMPIVIDFLGDAANLLI
28828..29247                       PHAGE_Stx2_c_1717_NC_011357: truncated transposase; UMNK88_pK8831; phage(gi209447151)     5.20e-13            EscherichiacoliUMNK88MELQDWRKEPRKKYSNEFKLRMVELASQSGACVAQIARENGVNDNVIFKWLRLWQNEGRISRRLPVTTSSDTGVELLPVEITPDEPKEPVAALTPSLSTQTTVSASSCKMEFRHGNMTLENPSPELLTVLIRELTGRGR
complement(29259..29981)           hypothetical protein; UMNK88_pK8832                                                  N/A                 EscherichiacoliUMNK88MTRLSQLAGNLRVILTPAVTIAVLFASFQQGFSLFNFTTQFFRTGTEQHPAQFFHLGPQMLYFPLIFFDLFFGTCQRRTQEGLRLFNQTQLLVFLTEGFSLLREQPFQLSDPNEVFLTHDRFYNPAMTFLQHCQCVKTGCFGLTPVQLIEEHCQLRAGNGYLAVTHRRPDKLAFLQAFGEQAQTISISPQDFNRVTPSATEDEQVTGEGIIIQHMLYLFSQSVEGFTHIGNAGNEPDAGA
30106..31236                       PHAGE_Stx2_c_1717_NC_011357: transposase; UMNK88_pK8833; phage(gi209447153)          3.43e-176           EscherichiacoliUMNK88MSSALKVIRTERVKKACTKCDCIVEAPAPSRPIARGVAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYRYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHFRPFRGILQADAFNGYDRLFSAGREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHDIRGLPVSEHLAVRQMQSRPLLTSLYKLMQEKEHTLSKKCRLGDAFRYIRKHWAALCNFCDDGLAEVDNNAAERALRAVCLGKKNYVFFDSDHGGERGALLYGLIGTCRLNGIDPEAYLRHILGVLPEWPSNRVDELLPWNVALTNK

#### region 3 ####
32250..32660                       PHAGE_Lactob_Lj771_NC_010179: MazF-like protein; UMNK88_pK8835; phage(gi163932202)     7.85e-14            EscherichiacoliUMNK88MIQMLKYQLKNENGWMHRRLVRRKSDMERGEIWLVSLDPTAGHEQQGTRPVLIVTPAAFNRVTRLPVVVPVTSGGNFARTAGFAVSLDGVGIRTTGVVRCDQPRTIDMKARGGKRLERVPETIMNEVLGRLSTILT
32944..34716                       PHAGE_Entero_GEC_3S_NC_025425: hypothetical protein; UMNK88_pK8836; phage(gi754380789)     6.04e-09            EscherichiacoliUMNK88MANENLDIDSKTAEELYEWYLDDKLIINRRYQRKLVWSLEEKTALISSMTQQYPIPLLLFVSIDNKREILDGMQRLEALMSFIEQRFSLNGKYFNLDAIALTKQLKDSGKLQQKEPVLSRESSTLIARYRFAISEYSSTEDHIDEVFRRINSNGKILSKQELRSAGCVSNFSELVRKISTIIRGDTTHSDIMGLNKIHNISICNDGLDYGINIDNHFYIRNHIISRPSIRDSDDEELVANILGYIFLDDKPTSGSTSLDTFYGEGSTSHAIHTRTQLENYIQTNGADKIVNNYLFVYEMIQKLFDANNLNFRSHILGNASSSQECPRYYQAVFLALYELIINENMQLDDEQKFIAQLGDSVQRSMVQTEGGRWAASARQKSVEDLCALIRRYFKESENKFINHAWQTLIRTLLNNSRTEQPNYDFKQGLFILSGENKIDEECFINIVQTAVAINNIGRESNGYILVGVSDTKATADRVKALYGVTPIECNGYYINGIDHEAVIQSKNIDNYFLFIKQKIESFNFNEALKQQILKDISLCSYEGLHVLKIEIKSVGEVCHFENRYYIRQGTATHLITDGEAISSLHRLYYS
complement(34994..35719)           PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; UMNK88_pK8837; phage(gi557307613)     1.63e-119           EscherichiacoliUMNK88MMHELEVLLSRLKMEHLSYHVENLLEQAAKKELNYREFLCMALQQEWNGRHQRGMESRLKQARLPSVKTLEQFDFTFQPGIDRKVVRELAGLAFVERCENVILLGAPRVGKTHLAIALGVKAVDAGHRVLFMPLDRLIATLMKAKQENRLERQLQQLSYARVLILDEIGYLPMNREVENVVVKNTKVSTTNPESGFMHRDNSSFGVRNRTILYIYARKCTEVSQMVIGRSEHFVQPLRSVS
complement(35716..36888)           PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; UMNK88_pK8838; phage(gi557307612)     0.0                 EscherichiacoliUMNK88MLSREDFYMIKQMRQQGAYIVDIAAQIGCSERTVRRYLKYPEPPARKTRHKMVKLKPFMDYIDMRLAENVWNSEVIFAEIKAMGYTGGRSMLRYYIQPKRKMRPSKRTVRFETQPGYQLQHDWGEVEVEVAGQRCKVNFAVNTLGFSRRFHVFAAPKQDAEHTYESLVRAFRYFGGCVKTVLVDNQKAAVLKNNNGKVVFNSGFLLLADHYNFLPRACRPRRARTKGKVERMVKYLKENFFVRYRRFDSFTHVNQQLEQWIADVADKRELRQFKETPEQRFSLEQEHLQPLPDTDFDTSYFDIRHVSWDSYIEVGGNRYSVPEALCGQPVSIRISLDDELRIYSNEKLVASHRLCSASSGWQTVPEHHAPLWQQVSQVEHRPLSAYEELL
complement(36962..37447)           PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; UMNK88_pK8839; phage(gi26249446)     1.39e-106           EscherichiacoliUMNK88MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVHLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKTAVPPSKRAHTGKVAVKESNQRWCSDGFEFRCDNGEKLRVTFALDCCVSASDIRR
complement(37440..37817)           PROPHAGE_Escher_CFT073: transposase insC; UMNK88_pK8840; phage(gi26249447)           2.34e-75            EscherichiacoliUMNK88MIVLILVFRLVIGEQMIDVLEPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGMAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLRTKKRWKMNSSKKPLNMDGQKGG
37783..38091                       PROPHAGE_Shewan_MR-1: IS110 family transposase; UMNK88_pK8841; phage(gi24375433)     5.84e-08            EscherichiacoliUMNK88MTSLKTSIKTITYLSDIGCLEIQGASLITKAGDSYLRTLLAQGARSVLIGAEKRTDSFSRWVCTLVERRGYWRAVVAIAAKNARLCWTSLHYGDDFRLYSAS
complement(38192..38506)           conserved hypothetical protein; UMNK88_pK8842                                        N/A                 EscherichiacoliUMNK88MRKISPDRELTPATVIPQRPLSQATIPCELRTPRDRDGTFEPGVSLDIENYCTIRASPACQRRFYSFCLLVSKIKGRDCGTINGHDESLSIRALMKDAREVLVR
complement(38778..39851)           putative glycoporin RafY; UMNK88_pK8843                                              N/A                 EscherichiacoliUMNK88MEFNIDAASKSGQLVMINSGVNSDSVNERWDLNGRILLGFDGARKLDNGYFAGFSAQPLANIHGSVNIDDALLFFGKKDKWKVKVGRFEAYDMFPLNQDTFIEYSGNTANDIYADGRGYIYMMKEGRGRSNAGGNFLISKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMERQKNVAYLRPVIAWSPTEEFTVSAAMEANVVNNAYGYTDSKGNFVDQSDRTGYGMSITWNGLKTDPENGIVVNLNTAYLDANNEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCWIDDERSYTIHTIHASYRFANVMDMENFNIYLGTYYSILDSDKMYINDSSTESRYGVRVRFKYLF
complement(39894..40775)           PROPHAGE_Escher_CFT073: transposase insD; UMNK88_pK8844; phage(gi26251005)           5.95e-150           EscherichiacoliUMNK88MDSACALVTFGQGIAPVSRVLGVSRAQLTLRMKASDNKPDKRRQRRDETADAEVLSRILDIIGDMPAYGYRRVWAILRRQSRNEGLPFVNAKRVYRIMSENSLLLLHDKPSRRQREHKGRISVKESDQRWCSDGFEFGCDDGEKLRVTFVLDCCDREAIDWAASTGGYDKATVQDVMLGAIEKRFGDKVPEQSIQWLTDNGSAYRAHETRQFARELNLEPCTTAISSPQSNGMAERFVKTIKEDYIAFMPKPNVRTALHNLAVAIEHYNENHPHSALGYRSPREYRRQRVMLT
complement(40733..41128)           PROPHAGE_Escher_CFT073: transposase insC; UMNK88_pK8845; phage(gi26251004)           1.88e-63            EscherichiacoliUMNK88MSNTSSNFEMAGVLLGKEVRKRKTPQEKIAIIQQTMEPGMTVSHVARLHGIQPSLLFKWKKQYQEGSLTAVAAGEDVVPASELAAAIKQINQLQRLLGKKTMEVEILKEAVEYAQSRKWIAHVPLLPSDKE
complement(41191..41538)           putative glycoporin RafY; UMNK88_pK8846                                              N/A                 EscherichiacoliUMNK88MESKMNKLLSGLSVFLLLAHNECAAKKGGLTLEQRMALLEERLEVSEKRSEKAERMLKSFDIEQHSEIRQIRSEQDKKDVNRYAVAESTQEKISSPGVLLSGFNELKFYGDVEFN
complement(42126..43556)           PHAGE_Bacill_SP_10_NC_019487: levanase; UMNK88_pK8847; phage(gi418489513)            4.89e-28            EscherichiacoliUMNK88MKQRLSLAQSALEKLSARRGNTWYPIFHLAPPAGWMNDPNGLIYFNGRYHAFFQHHPASAYQGPMHWGHATSTDMLHWQHELVALAPGDKYDRDGCFSGSAVDDDGVLSLIYTGHICLEDRGNDSIIREVQCLATSHDGIRFEKQGCVLTPPEGIMHFRDPKVWHEDGSWWMVIGARDASDNGQVLLYRGTSLRDWHLEHVLAHSAAGESYMWECPDFFRCGNFHWLMFSPQGMNPSGYRFRNLFQSGVLAGNWKPGSVFALKGVFEELDYGHDFYAPQSMLAEDGRRIIMAWMNMWDSPVPTRSEAWAGCLTLPREVFERDGRLCQRPVREVESLRRKCQPLSPVRLHGVQLLTENVQAAELLVTWHTVDSHAEHYGIRLGEGLRFYVDNQAGRLILWRYYPEEGLDGYRSVELPDTEYLTLRIFLDRSSVEVFVNDGEATLSSRIYPQADSRQLSLYAAHGDAILTDGTLWMLT
