gi|00000000|ref|CP002731.1|  Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence. 90868, gc%: 50.34%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
10741..10753                       attL                                                                                 N/A                 GTTATGTGGCCTC
10900..11688                       PHAGE_Mycoba_Squirty_NC_026588: non-functional integrase; UMNK88_pIncI112; phage(gi764159894)     6.10e-07            EscherichiacoliUMNK88MSGPQLLSLPGSFLTPPATLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLRRKMLLATLWNTGARINEALALTRGDFSLTPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDAWYVSQLQTMVATLKIPMERRNKRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFSMPESDAVSMLKRIP
11835..12512                       PHAGE_Burkho_phiE12_2_NC_009236: gp12, partition protein; UMNK88_pIncI113; phage(gi134288738)     3.34e-07            EscherichiacoliUMNK88MGITCGFWRYTMPVIANTHPKGGVGKTTSSVNIVGEMKSDTVDLDTHTGLSIILGLRPEGKEISVKVPKTVDELIEIMTPYKNSDKTLLIDCGGFDSDLTRTAIAFADCVIVPSKDSLTERIGLMHFDGVLDEISSIMGTDITAHLYLCKVNPNKKKFPKLDAILPSFKHLKLMKSRISARAEFEDVIETGMGITESVHGRYSAGGKEVIALIEEINHLIENNKQ
12599..12907                       conserved hypothetical protein; UMNK88_pIncI114                                      N/A                 EscherichiacoliUMNK88MSKAKFSAQAEKLKNLVDSARLQTSSSAVTATAPSQPNEGAEEVSGRPVAARTKAKNLKAIPLSYFEAHAELKATSKTSLDFSSYIIEAIREKLERDGAIGQ
13267..14301                       PHAGE_Entero_P88_NC_026014: recombinase; UMNK88_pIncI115; phage(gi744692717)         5.18e-106           EscherichiacoliUMNK88MYEACLFFLFVYEQRRLVMKIFIDDGSTNIKLAWLEDGDVKTLISPNSFKPEWSFSLLDDAAPANYEIDGEKFSFDPLSADAVVTTETRYQYSDVNVVAIQHALQQTGLKAQPVDVIVTLPISEYLDANNQKNKQNIERKKKNVMREVRVQGSDAFVIRSVSVLPESIPAGFSVLAGLEDDESLLIVDLGGTTLDVSHVRSKMTGITKTWCDPNIGVSLITSGVKEQMAVHANTRVSSYQADNIIVHRNEPDYLSRRIYNAEQRESIINVINERQKLLIKRVNDVISRFTDYTHVMCVGGGAEIVAEAVKNLTKVPDERFYLSSSPQFDLVMGMIKMKGGVTNE
14294..14710                       putative plasmid partitioning and stability protein StbA; UMNK88_pIncI116            N/A                 EscherichiacoliUMNK88MSDENKSRRCSFELFPDERTGDKIADELIANEKLKERGRFMRAMLVTGAAFAAIDKRLPLLISELLTENTTLDDINKVISSVIPGAFSVEKKLLELLEKQSGLHTSVDCSTPLTEQSLSRNDGEDQTRRNAENMFGDD
complement(14712..15986)           PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; UMNK88_pIncI117; phage(gi431811050)     0.0                 EscherichiacoliUMNK88MFALADINSFYASCEKVFRPDLRNEPVIVLSNNDGCVIARSPEAKALGIRMGQPWFQVRQMRLEKKIHVFSSNYALYHSMSQRVMAVLESLSPAVEPYSIDEMFIDLRGINHCISPEVFGHQLREQVKSWTGLTMGVGIAPTKTLAKSAQWATKQWPQFSGVVALEAENRNRILKLLGLQPVGEVWGIGRRLTEKLNALGINTALQLAQANTAFIRKNFSVILERTVRELNGESCISLEEAPPAKQQIVCSRSFGERITDKDAMHQAVVQYAERAAEKLRGERQYCRQVTTFVRTSPFAVKEPCYSNAAVEKLPLPTQDSRDIIAAACRALNHVWREGYRYMKAGVMLADFTPSGIAQPGLFDEIQPRKNSEKLMKTLDELNQSGKGKLWFAGRGTAPEWQMKREMLSQCYTTKWRDIPLAKLG
complement(15986..16423)           PHAGE_Cronob_ENT39118_NC_019934: protein umuD; UMNK88_pIncI118; phage(gi431811072)     1.60e-26            EscherichiacoliUMNK88MSTVYHRPADPSGDDSYVRPLFADRCQAGFPSPATDYAEQELDLNSYCISRPAATFFLRASGESMNQAGVQNGDLLVVDRAEKPQHGDIVIAEIDGEFTVKRLLLRPRPALEPVSDSPEFRTLYPENICIFGVVTHVIHRTRELR
complement(16420..16668)           PHAGE_Sodali_phiSG1_NC_007902: ImpC protein; UMNK88_pIncI119; phage(gi89886014)      4.83e-21            EscherichiacoliUMNK88MIRIEILFDRQSTKNLKSGTLQALQNEIEQRLKPHYPEIWLRIDQGSAPSVSVTGARNDKDKERIMSLLEEIWQDDSWLPAA
17032..17883                       hypothetical protein; UMNK88_pIncI120                                                N/A                 EscherichiacoliUMNK88MEAACERRIPMPNWCSNRMHFSGEPAQIAEIKRLASGAVTPLYRRATNEGIQLFLAGSAGLLQITENIRSEQCPGVTAAGRGAVSTENIAFTRWLTHLQNSVLLDEQNCLMLHELWLQSGTGQRRWEGLPDDVRDTITALFTAKRGDWCGFWSNEDVSVWWNRLCDNVLPEKTMPFDLLTVLVGYEVNISSQGDNFIQVDFDTPWCQPESDVIAELSRRFSCTLEHWYAEQGCDFCGWQLYERGELVDVLWGELEWSSPTDDDELPEVTGPAWIVDNVAHYGG
17880..18191                       conserved hypothetical protein; UMNK88_pIncI121                                      N/A                 EscherichiacoliUMNK88MKYDGDGRETARFFSDKGCRRAPLFTAPADAARHKRCLWSVSRVRRARDGRFYRSRLASVTVYASPSPFSDERPSSRFRGITLPSERRRLRYSTVGLTRYRTR
18267..18950                       PHAGE_Staphy_Stau2_NC_030933: aerobic ribonucleotide reductase B subunit; UMNK88_pIncI122; phage(gi100063)     1.35e-28            EscherichiacoliUMNK88MSRFVLGNCIDVMARIPDNAIDFILTDPPYLVGFRDRSGRTIAGDKTDEWLQPACNEMFRVLKKDALMVSFYGWNRVDRFMAAWKNAGFSVVGHLVFTKNYTSKAAYVGYRHECAYILAKGRPRLPQNPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESFTHPNAIVLDPFAGSGSTCVAALQSGRRYIGIELLEQYHRAGQQRLAAVQRAMQQGAANDNWFMPEAA
20561..20573                       attR                                                                                 N/A                 GTTATGTGGCCTC
