gi|00000000|ref|CP002779.1|  Pyrococcus yayanosii CH1, complete genome. 1716818, gc%: 51.64%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
267765..268190                     PHAGE_Gordon_Sadboi_NC_048815: hypothetical protein; PYCH_03250; phage(gi100011)     2.19e-09            PyrococcusyayanosiiCH1MRLRIPAELLEEIVSAASESNVEVCGFLFGERRGDEWVVRKVTFVKNRLNSPTAFEMEPEDMVKALDDAEKENLEVVGIFHSHVSCPPRPSSKDVKGMTLWPVPWLIVTGHKVAAFMLEKGKPKEIELKIISRCQSSRTLP
complement(268156..268395)         hypothetical protein; PYCH_03260                                                     N/A                 PyrococcusyayanosiiCH1MTEIRHYKIGEDRFKISEDEVARRELKVTKVADDVIQIQEEIHGIIALVGATSTVNIKKDELKELIKIVREEFGWTDIC
268512..268587                     tRNA                                                                                 N/A                 CCGCCGTAGCTTAGCTGGTGGAGCGCCGGACTGTTAATCCGGCGGTCCCCGGTTCGAATCCGGGCGGCGGCGCCAG
268592..268669                     tRNA                                                                                 N/A                 GGCCCGTAGCTCAGCCTGGTCAGAGCGCGCGGCTCATAACCGCGTGGTCCGGGGTTCAAATCCCCGCGGGCCCACCAT
complement(268669..269421)         hypothetical protein; PYCH_03270                                                     N/A                 PyrococcusyayanosiiCH1MLLYASLTSLTVFTFAVLVKKPKGWNSLRKNLQSAILGFLNPFLYYLVLFNAYSILPAQEAQALNYTWPLILTVFAWLFLSQPLRVRGIFGVFMGFLGALIVSSKGSIGSLSLSNILGDLLALSSALIWASYWVLNLRDGRKAEVKMFWNFLFGSLYILTYVAWRGKLVLDALGIIGSVYVGLFEMGVTFLLWLRALEKEEASKVAGLVYLTPVLSLFFITTIVREPLRASTIVGLALILMGARIARGRG
269420..269539                     hypothetical protein; PYCH_03280                                                     N/A                 PyrococcusyayanosiiCH1MLAGLILERVSLNAEATVDQRRIASRALWFMGENRERSF
complement(269629..269829)         50S ribosomal protein L24e; PYCH_03290                                               N/A                 PyrococcusyayanosiiCH1MARWNICSYCGKPFEPGTGKMFVRNDGRVFFFCSRKCERYFFMGRNPRKLKWTKAYQEARLQRGKK
complement(269835..270050)         30S ribosomal protein S28e; PYCH_03300                                               N/A                 PyrococcusyayanosiiCH1MAEDEGYPAEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNVRGPVRVGDILILRETEREAREIKSRR
complement(270093..270464)         50S ribosomal protein L7Ae; PYCH_03310                                               N/A                 PyrococcusyayanosiiCH1MAKPSYVKFEVPKELAEKALEAVEIARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIEPGKAKELVEEIAMKVRELMK
270573..271169                     PROPHAGE_Escher_MG1655: rhomboid intramembrane serine protease; PYCH_03320; phage(gi49176353)     6.90e-05            PyrococcusyayanosiiCH1MGANLRNLVKYFPATAGLLTIIALVFIYELIVGFDTAIVQLAQINLLVFYAGQWWRLVTAIFVHMGFIHFALNTFWLFYLGMDLEGIVGSKRFLLVFFLSAIVGNVLSLFTLPLDVASGGASGGLFGIVGASLAIEGVLKRNMQKALMNAIILFLINSIFPGVNIVAHFGGLAAGLALGYIYGRWLRRKLMDMSYWFE
complement(271170..271874)         PHAGE_Aeropy_1_NC_028268: hypothetical protein; PYCH_03330; phage(gi948298243)       4.09e-21            PyrococcusyayanosiiCH1MGKRGSGSLSPEGFAFEESWAEKKRRAEEIVRILKEVYPRERHVSGEPYRTLIKCIISQRNRDEVTDRVAEELFRKYPTINDIANASVEKMQEFLRSLKVGLWRSKGRWIVEVSRIILERYDGRVPDTLEELMKLPGIGRKCANIVLAYGFGKPAIPVDTHVNRVSKRLGLAPLEASPEKVEEYLKVLIPKEEWLYVNHAMVDHGKKVCRPIKPKCNECPVRNLCPKVGIKFGT
complement(271840..272271)         Cell division protein 48 (CDC48), domain 2; PYCH_03340                               N/A                 PyrococcusyayanosiiCH1MRLVLKPLFDVELPVGFEDILRAKLKGRVVKTGQEIEVDLLGKPLRFQVLYAEPEPLIVNDRTRVEITGGDTFILDIEFDEPVKGVIPFEKGFVIVFPKKVLILNQNGQKIYSDEFEELNEVSVSGDVVVIVHGEKRVRLIKP
complement(272272..272718)         transcription regulator; PYCH_03350                                                  N/A                 PyrococcusyayanosiiCH1MLDELDRGILQILQEDGRVSYAEIARKLGVPESTVRLRVRKLVERGVIRKFAALINPFKAGYEVVAVIAVDTEPSKVKKVAEELAKLPEVDVLGIATGAHDIFMQVTVRSLRELEEFLIEKLGKIDGVKSTETSILTSVKKWGYARVF
272837..274168                     PHAGE_Mycoba_Alice_NC_028986: gp185; PYCH_03360; phage(gi971763384)                  2.60e-10            PyrococcusyayanosiiCH1MDPEEVVAGYERVIAPANRTTYFPLVPVRAENARIWDVKGREYIDFLSDAAVQNVGHNNPRIVMAIKEQAERLLHASFIYAFPIEPLLLAEKLVQLVPIRNAKVSFGLSGADANDGAIKFARAYTGRLTILSYMRSFYGSTYGAMSITGLDFHVRALVGELSGVHYIPFPNCYRCPFGKESGKCRFECVEYLKEKFEGEVYAEGVAALFAEAIQGDAGMVVPPENYFKRIERILDEHGILLVVDEIQSGLGRTGKWFAIEHFGVEPDIITVAKPLGGGLPISATIGRAEIMDALPPLSHAFTLSGNPTAARAALAVIEEIEEKDLVKRAERLGEKAKRRLERMKARHELIGDVRGLGLMLGVELVKDRETKERALDETKKVVWRAFELGLIVAFLQGNVLRIQPPLTIEEELLEEGLERLEEAIEDVEAGKVPDDVVKKVRGW
274320..274775                     PHAGE_Bacill_0305phi8_36_NC_009760: predicted transcription regulator; PYCH_03370; phage(gi156564189)     8.32e-07            PyrococcusyayanosiiCH1MERPRLRGYLKLLILHMLRENPMHGYAIMSELEKRYGIPGPSAGAVYPVLSELKRLGLIEVTGQGKREKKVYSITQEGFEFLEENKGKLEEILRKVEAYKEFSKLGGRELAKTMKELLEKLPEMSEEEKEKIREEILEFTRKIRLILLGGD
274776..275762                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; PYCH_03380; phage(gi371496158)       4.92e-22            PyrococcusyayanosiiCH1MYAIEVENLVKKYGDFEAVRGISFKIKRGEIFAFLGPNGAGKTTTVHVLTTLLRPTSGRAIVAGHDVVEEPMEVRRKIGIVFQDPSVDRELTAWENMYIHGRIYGLGGRELRERIERLLKFVELWEFRDRPVKFFSGGMQRRLEIARALLHEPEVLFLDEPTIGLDPQTRAKIWEYIRTMKEEHDMTIFLTTHYMDEAEQLADRIAIMDHGKIIAEGAAEELKKLVGNDIIYLRLESPEEELKRLKAEFIRGCKLLPDGRVRLDVENAAEALPKLFELAQRSGVKILEVTYHRPTLNDVFLHLTGREIRDEGSDGNVARMIMRARMRR
275768..276535                     ABC type transporter permease component; PYCH_03390                                  N/A                 PyrococcusyayanosiiCH1MRVLTTMIYRELKRFLHSRARVVGSLLNPLIWLIFFGKGWAGAFKFPGANMLFGGVDYMTFMVPGIVAMTVFNMGFMQGITLIWDRQFGFLKELLVAPASRVEAIIGRSVGGALMAIIQGTIILALSFLIVDGLKLSGVFPTLALAFLVGVAVSGLGMAIGMRMTTMEGFQIIITMLMLPMTFLSGAFYPVSTMPDWMQFLAKLNPLTYAVDGARYYLAGIEPTFGIATDWAVLSTLAVVFVGIAALEFRKATID
complement(276595..279756)         PHAGE_Staphy_S25_4_NC_022918: putative helicase with intein; PYCH_03400; phage(gi561133191)     1.41e-07            PyrococcusyayanosiiCH1MKRIRQPIIAVLGHVDHGKCLLPEERVVVPGLGSLTLEELFEIADEIVERDDEKEIRKLRIPLTAVDGNGAIAMVEGSYVWRLRHRGKIVRVKLKNWHSVSVTPEHPFLTTRGWKRADQLKPGDYVAVPRYIHGNESRERFMAFVYSKLSKRDGRYARLPRSDDEWRAFFYFAGVMFGDGSQKVTNDYAEVFERLESIEKLGVELKLLRVLFDYSDGIPDVLFLAPKDYVAEFLRGYFDVHGSLEDDRVEVTGASREFIEGLSLVLLRFGIVSKIYRSGYTTLVISGRRNLDAFRRHIGFTVREKAEMLKRAIDKSRGSEAYPIFEELKRLRLLFGFTRAELDSEVPFYSKYEESEAPSYETLMQILDAIERGSPTLAKKIAVLEGRAKDVNYLKALERDGLIKDGHLTELGRELLEVWRNREFDSRDVEYVRNIAESLVFIPVEAVEELDYDGYVYDLTTETHNFIANGVLVHNTTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRRYKTPFVVAANKIDRIRGWVIEEDEPFLVNIKKQDQRVVQELETKLWELIGKFYEMGFQANRFDRVQNFTRELAIVPISAKYGIGIPELLVLIAGLSQKYLEEKLRIEVEGPGRGTILEVREEPGLGTTIDVIIYDGTLRKDDIIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDQVEEVTAAAGVKIAAPDLEEALAGSPVIAARTEEEIERAKQEILSQIQSVVISTGKVGVIVKADTLGSLEALSKELQEKNIPIRKADVGNISKTDVMEALSVKEEEEKYGVVLGFNVKVNEDAEEVAKAKGVPIFVGNVIYKLIEDYEAWMKAEEEKKKRELLSRVTFPGVIRLYPDERYVFRRSNPAIVGIEVLEGRIKPGVTLIKQNGQKVGVIKSIKSRDEFLQEARKGQAVAIAIEGAIVGRHIHPGEILYVDIGRDDAIILLKQLRSELEDTDIKALKMTAEVKAKEDPFWRAI

#### region 2 ####
1579168..1580451                   PHAGE_Vibrio_vB_VchM_Kuja_NC_048827: pore-forming tail tip protein; PYCH_17660; phage(gi100139)     4.10e-40            PyrococcusyayanosiiCH1MKVSVVGSGYVGLVTGMGFVKLGNEVIFVDVDERKVKMINNAEPPIYEKGLEELMKEFRGKYRATKDYHEAVLNSDVTFIAVGTPSREDGSIDLKYVESAAKAIGEALKEKDSYHVIVVKSTVLPGTTEEVVKPLIEDHSGKKAFRDFGLAMNPEFLREGVALRDFLNPDRVVIGVQDERTKQVLEKLYKPIKAPKLITDIKTAEMIKYASNAFLATKISFANEIGNICKKLGIDSWKVFEGVGLDHRISPHFFRTGIGWGGSCFPKDVKALIKKAEEIGEEPLILKAVLEVNERQPLRLIELLKKHVPELEGKTVGVLGLAFKPGTDDVRETRAYPIIKKLLEEGARVIAYDPRAMENFRRFYPDVGEKITYANSSSEVLDATDVILIVTEWKEFEELDYSGKIVVDGRRVKAAEKTAKIYEGVCW
1580448..1581308                   PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; PYCH_17670; phage(gi100148)      4.00e-92            PyrococcusyayanosiiCH1MRIRKAVIPAAGLGTRMLPITKSMPKEMLPIVDKPVIHYVVEEAIKAGIDDILIITGKGKRTIEDYFDRSFELEYYLREKGKLDELRQVEEIGEMIDIYYVRQKKPLGLGDAILHAEKHVNGEPFAVLLGDDIIVSEKPGIGQLIEVTQKKNAPIIGVEKVPWDRVSRYGIIKGKEIGKGLYTVEDLIEKPSPNEAPSNIAIIGRYILPPEIFDVLKETPPGKDGEIQLTDALRLLVKDTNLLAKEIEGRRYDVGDKVEFIIANLELGLVRKDVRKHILEYLERFK
1581395..1582240                   PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; PYCH_17680; phage(gi30043988)     6.40e-09            PyrococcusyayanosiiCH1MLNQTFEDFELIVVDDASIDNTPKVIKEINDGRVRYIRLERNSGGPVARNTGIRRARGRYIALLDDDDEWLPQRLELQVKKMEEVGRNVGVIYGGFYYVSQDTGKIIGRRLPRYRGNIYEHLLRENFIGSPTLLIRRKCFKRAGLFDPKLKSSQDWDMWLRIAKYYEFEYVSEIVAKYYVHGRQITFNIKKYIPGRERFIRKHLDIYKNPKILSIHLSQMGLVLILGGNIEKGLKYLTKSFVIAPLNLDNYSMLIKLVFDSRSVEYAKKILISSINILKKT
complement(1582347..1583204)       PHAGE_Entero_phi92_NC_023693: Phi92_gp064; PYCH_17690; phage(gi726646997)            2.41e-39            PyrococcusyayanosiiCH1MRVAVIGATGQLGSDIVEVLSEDPTFEVIPLTHDDVDVTIPESLKVIERIKPEVIINTAAYVRVDDSELYPEEAFKVNAIGALNVAKIAEKINAVNVYISTDYVFDGEKGKPYKEEDPPNPINVYGASKLMGEIFTRNYSSKHYVIRVASLYGRRGARGKGGNFVEWVIEKARRGEKLKIVNDQLMSPTYTKDVALALAKFLKIMPEYGVYHMTNDGFCSWYEFTKAIFEILGWDVEVEPISSEELGRLAKRPKFSALSVEKLRSIGIEMRHWKEALRDYLRLKL
complement(1583243..1583434)       hypothetical protein; PYCH_17700                                                     N/A                 PyrococcusyayanosiiCH1MVKRSVTVKLQPSKEQEKILFELAQATAIIWNKMAEDPARGVQGTLERVPDGDPSNLPANGEG
complement(1583428..1583589)       hypothetical protein; PYCH_17710                                                     N/A                 PyrococcusyayanosiiCH1MGKMTIVIDDELEKEFRKAVAKRYGVRKGALGIAISEAIKMWIKKVKETGEEW
complement(1583761..1584165)       nucleic acid-binding protein; PYCH_17720                                             N/A                 PyrococcusyayanosiiCH1MIVIDASSLAKYILREENWKKVREYLLDDPYSLTLALAEVSNAIWKHYVLYKVISNKEAGIMLEALKKLKEDVVIFEPFEDYLEDGMKISISENIPIYDALYLVQAKKYGSLLTSDEKQWKIAKKLGIKAEYVE
complement(1584152..1584373)       hypothetical protein; PYCH_17730                                                     N/A                 PyrococcusyayanosiiCH1MEVVSFRIPHELKKKMKEVDINWSEEIRKFIEAKVREYRKKKALEEIDIMLANLPKTEKGTARKYVREDRDSN
complement(1584428..1584985)       PHAGE_Entero_phi92_NC_023693: Phi92_gp065; PYCH_17740; phage(gi726646998)            1.22e-58            PyrococcusyayanosiiCH1MPFEFKKLEIPDVILIKPKVFEDERGFFMETYKKPDFEKAGIKGEFVQDNHSKSKYGVLRGLHFQREPYAQAKIVRCIRGVIYDVAVDLRKNSPTFGKYVGVILSEYNKYMLYIPRGFAHGFVVLSDVAEVVYKVDNVYAPDHEGGLIWNDPDVGIKWPIEDPIVSEKDRKWPTLRELIEKGELF
complement(1584996..1585223)       hypothetical protein; PYCH_17750                                                     N/A                 PyrococcusyayanosiiCH1MEPSPFRAGRRSVDERNIVVLPDYQEVSEWREVMKKYKLLPNDALIAITCKHYGINTLATLDEDFKRVDFLKVVP
complement(1585556..1585738)       hypothetical protein; PYCH_17760                                                     N/A                 PyrococcusyayanosiiCH1MPIIVEAIYENGVFKPLKKVKLKDGQKVRIRIELDVSKYYAAFGKASARELKELEEEVQM
complement(1585787..1586788)       PHAGE_Entero_phi92_NC_023693: Phi92_gp067; PYCH_17770; phage(gi726647000)            4.40e-95            PyrococcusyayanosiiCH1MKLLVTGGAGFIGSNFIHYILAKHKDWEVINLDKLGYGSNLANLKDIEDDPRYTFVKGDINDFELVKDIVKKVDGIVNLAAESHVDRSISNPQAFIESNVLGVYTLLEAIRKYNPDVRLVHISTDEVYGDILKGSFTEEDRLMPSSPYSATKAASDMLILGWARTYKLNASITRCTNNYGPYQFPEKLIPKTIIRAKLGLKIPIYGTGQNVRDWLYVEDHVRAIELVLLKGEAREVYNISAGEEKTNLEVVKTILKIMDKDEDLIEFVEDRPGHDLRYSLDSWKIMRDLKWRPKYSFEEGIKKTVEWYLENEWWWRPLVDEKVLHPTPWKLKW
