gi|00000000|ref|CP002874.1|  Brachyspira intermedia PWS/A, complete genome. 3304788, gc%: 27.22%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
74342..74353                       attL                                                                                 N/A                 CAAATGATGAAT
74721..76445                       PHAGE_Burkho_phiE255_NC_009237: gp40; Bint_0082; phage(gi134288809)                  4.18e-51            BrachyspiraintermediaPWSAMNEWVLKMQEAKTAKERKKIVEEYSRIIGRSVSFCYKELKKNGYDSKRAKRKDIGKKNIDDNTIKIVASLVKTGIRENGKKTMPVNVALDMLKRNGYDINIKTSRMREILKDSKIDADRLKKDSHNIRLRSEYPNQVHQVDPSVALIYFAPESEDGKSKMKIIEDSEYYKNKDFFNDAKDKKGKKIRRKKCLRYVLTDHYSGSICLRYYAAYGETAEYLYDFLLYAWSKKEREDYAFHGVPEILVWDKGSANTSKSVANALRSLKVKTIAHSTGNSRAKGQVENANNLIETHFECLFRLEAISSIEELNEAAERFCVEYNTKMKIKRMGQIINSRYLLWQKITLEQLRELPDIEVCKQIFSAGVLKRKVKSDLTISMYHAKAKRTLYYSLINLGVEKGDEINAQAVLFGDKYKAIIWFNRKNEYGESEELSYEIEPIEIDEAGFDINAAVIGKEYKQTKLTENENDIKEIENISEEIKRQEILKSHSLIQPDIKFIYQKEGEKINLDKNDNDSREILLSYVEVMEKVKSGLGYVPDDLAEELKKDYPNGVEYGYVDEIIRFWKNKEDKENENII
76727..77587                       PHAGE_Pseudo_B3_NC_006548: putative transposase B subunit; Bint_0083; phage(gi56692579)     6.91e-53            BrachyspiraintermediaPWSAMAINIKAFRKFGFKHDPFFGDIEKMEDVYLNGDMRFMTEFICQTAKQGGMVALIGESGSGKTTLRRYAIDTMEKENQRVKIIQCKIIDKTRLSVGAICDSIILDVSSESPKKSLEAKARQVERILTNSSRMGFAHVLIIEEAHDLSIATLKYLKRFWELEDGLKKLLSILLIGQTELAGKLDESKNYEAREIIRRMELLKIEPLSDPKDIKTYLQLKFAKAGVNIDDIITDKGIEAISSKLSSKLLKGTTISKAYPLSINNLMRRAINKAYDLKINKIDEHLIMSL
77618..77773                       hypothetical protein; Bint_0084                                                      N/A                 BrachyspiraintermediaPWSAMDKNKYKTLAIGIDKEIYAELDKYCKEKSITKSQFMRKIVNNILKRIIKNI
78386..78727                       hypothetical protein; Bint_0085                                                      N/A                 BrachyspiraintermediaPWSAMTVEELKEVLNSMNVAGAFACQRHASRGGTQGASSKNQKNENDKHFYVTYQDTKYLTEKQVKFIKGLWWKKSNNPSENTLKVFIKRITGKNSLSECGHKEANILITAIQEIKK
78735..79205                       hypothetical protein; Bint_0086                                                      N/A                 BrachyspiraintermediaPWSAMNNDFINSIKDSLLEAGISEELMIKTLRCFCRKYGGQKVYFSSSAESKRSNEIFNLIYDELDEENGKVEYGTSEKITRIFLENFYNISEYVPLEIKYFRKEIAAEILDEYNKSKDKNKTQFEICSKYNITFATFIKLKNQALKNIKIKSKPSKNLF
79377..80378                       PHAGE_Vibrio_12B12_NC_021070: I protein; Bint_0087; phage(gi481019166)               1.57e-29            BrachyspiraintermediaPWSAMDMKETVNAFELDYNKTIPKEIELIPSEEIFTGFDGRVFKARDKQAIISKTNSKLKYVVIDENHRIDYTAGTGQSTEAMGWMHDFFVKEDNSVWALVEWTESGSAKIKSKEYKYISPVYEVDKSGNIISILRAAITNNPNLRLTALNNKQNEFAESQLLGENSNKGDNMSKEINNALGINESASDSEAVNAINKTKNEIESLKLELNNERENKKSLIEKNTNLEKALNEVNKEFAELKKVNLEKDAQAAVEKAINDGKIAPSTKDVYLSLCMEDGGIEKFNKIMENTPKAGLFGETNIPNKTDNVSLNEADEEVARAMGYTKEEMLEMKKNEK
80415..81326                       PHAGE_Pseudo_FHA0480_NC_041851: hypothetical protein; Bint_0088; phage(gi100038)     5.37e-82            BrachyspiraintermediaPWSAMPVTVDSKLQSLKTVIKHEFNNAYGKLSPDSFCNKVCTQIASNSASNTYDLLGDFPEFKEWTSARQVKDMKEHSYTVSNKNYEATLGVKRMDLENDNIGTYRIKAARQAEAAIEFFNQSAADLLKNGESALCYDGQNFFDSDHPVYENSDGTGSNTPTSNIYGAGSSAAWYLLDLSKSLKPFIFQQREALKMEAITNPNSEYVFTNDAYMFGSSWRGAFCYGFWQQALISKEDLTAENFEKAYAQMRKVTKDGGRKMGIRATHIVIPPDLQSKAEGIFNVANNAAGAGNINYKKVEIIVCDWL
81345..81656                       hypothetical protein; Bint_0089                                                      N/A                 BrachyspiraintermediaPWSAMPKTKQNDIENKEDQGTENTNMNNKDEINDLQQDNTKQADLPDTESDNKSEKIKVFVKCNTGNNSYYRAGIKFFNVFREYQITKEVLKILKKDKHLIITDTLD
81781..82215                       PHAGE_Entero_SfMu_NC_027382: hypothetical protein; Bint_0090; phage(gi849255266)     4.97e-05            BrachyspiraintermediaPWSAMKSLISYEEFASRYSQDVLPELKDEGEPKEHVLQAINDATGIIVSHLFWIIDKEINDITENIPIQFESVLKTICCDIAFLRINDKVSSDEDSREKYKNAMNMLEKIDKEYRGLSGPNLQSSFIVDEKTDKDLFDNRFFKKGEFI
82218..82682                       PHAGE_Vibrio_12B12_NC_021070: phage virion morphogenesis protein; Bint_0091; phage(gi481019160)     1.39e-10            BrachyspiraintermediaPWSAMSAEVFITDIEEIKKLQDKLKSLKLSSSEERDILEAIGTEIKTQIEERFENQRDVSGNKWQDISQKTREYYNKKGIVGSILSRTRQLRDTIESQVNNSQLLTGATKVYAAVHNFGDDSRNIPQREFLGLSSDNYADIENIINEFLENSIKKANN
82705..83238                       hypothetical protein; Bint_0092                                                      N/A                 BrachyspiraintermediaPWSAMTYLDIRNNVENQIKKYFEDRKIKINVEASAGALNIDEIKRIFIKAPSIFVSMANINVEKEYIRFVNYVVVRANQKDKIYDSGLEITGALIACIKNIDSGSWGYDSKNISADCLYSGELDKINACLWGISWDLNVRSINIDGDINDVSGLDDFEGYDAEHKVEDKTAEDIVNIKDNS
83298..84794                       PHAGE_Vibrio_12B12_NC_021070: tail sheath protein; Bint_0093; phage(gi481019157)     1.61e-37            BrachyspiraintermediaPWSAMSTINFSQIPDSLLVPGQYQEVDNSLAGTRTEIKRILLVGPFLATGTAKNGVIERITSTIKAGEKFGYGSILSVMCEQFLSVNKNDELYALPITDNGTAYSKTYKIALTEANQTGNIKITVNTTEINISVVKEDTAETIAGKIAASVNTMFNFFMNAVSGESANEDATWNITFNALNKGDYGIILNIESDNSKITFAEDSKTDAADSPVSDWKVYFDAIGETRYNYIINAFNDENTLKKFAEELESRYSATRQIGGRMFAYLKGEIGNTSENDSIVGKASKVNSPHICFIPIVQTSSSINTNEFPIIFLTKIAAAAITELINDPSSNTLGLEVAGITTNKSLLFEERQNLLTGGVATYNTDAQGNVLIERLVTSYTTNSEGARDTSYLDIQIVETIDAIRTYINNEAKTRFKGWKLSSTNEDFGAGAKVMNAEVWTSFLCELYQSVFMEERAWTQDFQSYKESITAQVKSGTKTWLEYVHKPILIGQFYIGAGLNQFK
84838..85191                       hypothetical protein; Bint_0094                                                      N/A                 BrachyspiraintermediaPWSAMELFKVYKVTSRLLGDLPLQANGTTFSPQSYSRETKIGETPNATGYVETNTVAELKLKLNAVLDPGVFSGVKNDTLTIYFKNGMVYMMANAWVTDKVELGQGEYEVTYNSKFSEKIK
85211..85684                       hypothetical protein; Bint_0095                                                      N/A                 BrachyspiraintermediaPWSAMNNEIVINLKYPITQGERTVTSLILPKNVLVRHIMAGDPYPQNTVSREVAMLSAMTGEPEIILQNMEITDWVICQAKLNELINNSISNTEEKDNKKNDEYVEEDYIDIINIFRTLILEVMIMSKGLSYDNLINMTIKEFLKWHKESLRIYKVIKGIF
85801..87408                       PHAGE_Vibrio_12B12_NC_021070: phage tail tape measure protein; Bint_0096; phage(gi481019154)     3.39e-26            BrachyspiraintermediaPWSAMSNITAGVLIKLKDQFSSGIDKASNKVNSFQSKMQGAFSAIGAYSAKIDGILNSTASNLATLGVSIGVGATINKMIAFEDRINKIGTVAKMNAKDIETAKRQMEGLSEAIYKAAMQSDVKIDANEIIDAMDQIMEKTGDMDFARANIDNIAKSIRAFNATGTDIGSLLSEFSKLGYTSEETSKLLDELYSQGNKGAFVAKDFASLGASIISAYSVIGTAPEDIKNVGASMQVLRQAVGSSDEAVTRLEAVMSELANPETQYALEQLGASLGKDFSVTDSNGKMKDLNTIMMQIVNAQKELGNGWGALRENKVFGSDMVYEALNAYKNYGSSLEKYLDLEDAKGMRDKAAAENAKSLAANIQNLQTAFDSFANKNVAPYLEKVTGILNNFAKNPERFDAVFKVIAAGFGIFMTAKLVSGVANTISSINSLKNMAKGNISSTLQADSRHIQGTGTPIPVFVTNMGQFFSNGNNSNTFKAGQSSSNIPNINNGKMTWKSLGKTAGAGAMGAAVTAIPMAISGFMAANDPSLSKKNKIK
87405..87833                       PHAGE_Mycoba_KayaCho_NC_022061: tape measure protein; Bint_0097; phage(gi530546065)     7.64e-06            BrachyspiraintermediaPWSAMKGEAVGGAVGSIAGTAIGASAGAATSAAIGAAIGSVVPGLGTAIGALVGAGVGIAGGYLGSKLGGKIGESLTKEDTLEKTITANNIQNNNAQVEMKGAANIGVDIKLTDERTYYKATPYNNNIPNINIQTGNINEIRNMAY
99055..99066                       attR                                                                                 N/A                 CAAATGATGAAT
