gi|00000000|ref|CP002877.1|  Cupriavidus necator N-1 chromosome 1, complete sequence. 3872936, gc%: 66.49%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1206426..1207016                   PHAGE_Rhodob_RcRhea_NC_028954: minor tail protein; CNE_1c11850; phage(gi971760207)     5.28e-43            CupriavidusnecatorN1MLTVSVRHNIADVRKTLDNIAQKQMPFAIAKALTQTAKAVAGVESRALPRELDKPTPFTMRAFGTKPATKQRQIASVFIKPDQWKYLRYQVDGGERRPTKRAVVIPQGLRVNQYGNMPKGAIRKLLAKPGVFSGTVNGVPGIYQRKGRSVALLVKYVDKAGYKRRFDFAGIGQQAIAAEFGAIFGRALAGALATAR
1207124..1207642                   PHAGE_Entero_mEp237_NC_019704: terminase small subunit nu1; CNE_1c11860; phage(gi435439266)     3.71e-05            CupriavidusnecatorN1MTELLDDVDRTVTQAAFADLVGISQPAVSDLIGRGTLTRGASLRRWLVEYCENLREQAAGRASTGDLDLIQERAALAREQRIKIAMVNQQLQKELAPVSVLEAVLAKVGRQIATRLEAIPVQIKRRTTTLSAEDIDLITEEITKARNIAAAIKLEDLNDGPVGDSEGDYEGP
1207599..1209647                   PHAGE_Entero_lambda_NC_001416: DNA packaging protein; CNE_1c11870; phage(gi9626245)     2.83e-142           CupriavidusnecatorN1MDLSEIQKAITKGLSALAAPTPMSLSSWAAEHFYLSAESSYVEQKWQAFPYQVAILDAMSNDDIEEVVFIKSARVGYTKMILAAMGYFAHHKRRNQAVWQPTDEDADDFVKTEVDTMLRDVAAMATVFPAFMQRSKDNTMRKKGFLGSTLHIRGGKAAKNYRRLSVDVIYLDELDGFDSDVEKEGSPVVLSRKRIEGATFPKQILGSTPKLKGFSLIEGRSEQAEQRFSFRVPCPHCGGEHVVRWGGKDKPFGFKWQGDDPGTVLHYCPLCGEGYSQADYLTVWRRGRWVSETGMWIDLDGRFRSPEGEVVRAPRSVSFWVWTAYSEMTPWSQIVREFLSAQAKAKKGDTSELKTFVNTTLGETWEEDVEKADHEQLKARAEPYALRTLPMGVLAVTAGIDVQDDRFEIVVWGWGEGEESWPVDYQVLAANPASEASWDQLDAYLKTTYPHASGQVLGIEAAAIDTGGHFTHQVYNFVRTRGGQRLYAVRGEPAAGKPIKGRATKQDINYKGVMVKRGVRLWHVGTDTAKDLLFGRLKLSTPEPGQSMPGFVHFSDQLPVAFYEQLTAEVRVIQRTPRGEEHRWVKRKSGARNEVLDCTVYAMFAAYCLDLHRYTKPMWDRLRERVAPRQGDLLSDPLPGAIEQLLAVPAEAPATDSSVPEASVPTAHDDNWLGDTDGWLGR
1209660..1209881                   hypothetical protein; CNE_1c11880                                                    N/A                 CupriavidusnecatorN1MAFTLSQLEALEQAIASGELSVKYDGKEVTYRSMDDLTKAYNMVRGSLLATGQLTESSRTNRGPSSLAYFTRD
1209883..1211334                   PHAGE_Stenot_S1_NC_011589: putative portal protein; CNE_1c11890; phage(gi213163905)     3.07e-99            CupriavidusnecatorN1MNWLDNLVSYVSPLAGVRRAQARMALDTVRAYDAAKVGRRTDGWIAGGGSANAEIAPALHRVRQRCRDVVRNNEYAASALDKLVSNTVGTGFTAKAPNQAMWDAWCDYCDADGQLDFSGLMELAHRTRRESGEVIIRFRPRMPEDGFEVPLQLQVLEPDHIDSTKTGPMPNGNYAITGVEFDALGRRVAYWLFPQHPGEIAGFRLNSLESRRVPASEILHYYRKRRPAQVRGMPELGVSLLRLRDLADYEQAELVRKKIEACFVAFVRTDDANQQLGEAKQGASGQRQEKVAPGMIKYLSNAEGVEFGTPSAAGGYGDYTVTQLHAIAVGAGTTYEQMTGDLSRTSYSSMRGGLVEFRRLIGSEQWLALVPMVMKPIAQRFQVTAKLAGKQREAIAPFIWTPPKLEWVDPFKDVMATKEAIRAGMMSLSEAIRERGDDPARVFAEIKRERDELRAMGILSDADAAISERLIDASTAAQVMNQQ
1211399..1213453                   PHAGE_Stenot_S1_NC_011589: putative major head protein; CNE_1c11900; phage(gi213163906)     7.63e-86            CupriavidusnecatorN1MPTPQTPAAAPVAGERRDLPLMGRSAEVGTVDRDARTVDLVWTTGARVQRYDWWNERYYLEELSLDPAHVRMGRLQSGTANLLNTHSSYDLSDVLGVVTAASLDGDQGRASVRFSQRDDVQPYFQDVVDGIIRNVSVGYRIYKMERIAPAVDGDPWIYRAIDWEPYELSLVPVPADPGATTRSAEQGRQQRTFACEFFDQSTPAAAGNPTRKEPNMPGENTTTQPAATTTAATQTAPVVDQRALDAAREEGARAEAERQTGIREAVRLGGLDGAFADQLIGERSMSAADAGMAVLREQARRSAANPTRSAADIQTTRDETDARRAAMGDAIVLRANPRAFNDAARMDAARQFRGMDLMDMARQAIELGGGNCRGLSKREIAVMALNLDRDMQVRGGMSSTSDFPEILGNTVGRSLRQAYQVQTRTFLPFCRPSTAPDFKQVARTQLSEASALQKVNEGGEYKAISFGDSAEKYSLGKYGGIVSITWESLINDDLSAFDRMPMAIAAEAAALEGDIVYGILTGNPNMADGVALFHATHANLAGSGAAISEAALSAGRAAMLKQKGLKNRVLNVKPSFLVVGPDKEFEANKFTSANFVAAKSVDINPVYNTSLEVIVDARITGNLWHLIAEPGLIDTIEYTYLEGEEGLFTEQRRGFEVDGLQIKARHVFAAKAIDWRGLYQNPGA
1213537..1213869                   PHAGE_Shewan_1/44_NC_025463: minor capsid protein; CNE_1c11910; phage(gi712915945)     5.21e-08            CupriavidusnecatorN1MKNFVQKGDTLTLTPAAAVASGEAILVGKIFGVAVTAVAINTPGEFVTEGVFDITALSTDTASVGTVLYWDSTNKRLTTTSTSNTRVGVAVAAKANGDTTARIKLDETVA
1213869..1214171                   hypothetical protein; CNE_1c11920                                                    N/A                 CupriavidusnecatorN1MGFDTARFWPSFKRHGMLSAVSVAGSPDFDGRLDAPSGFFVDNMVQAGDVTLQYPADTPVTLSHGMTLQCKGRTYKVLSEEPERLQDGWLLQVKLKDITP
1214168..1214743                   hypothetical protein; CNE_1c11930                                                    N/A                 CupriavidusnecatorN1MTTTRKAIRHAVRDLLAAQPALTGRVFASRNYPVSEKKLPVVLVYTERDVSEQVTETQEQHTLDVVVRVVVPGDADEGADDQLDDLCTLVTATIAAAIYGWLTPMPTLTDLVENMVQRETNLAYRGDDGQQDLLAAEITFAASYSASPTAEFDQLGIVSVSFDMASPRNDPPTPIGPDGQIDARADIVLPT
1214764..1214952                   PHAGE_Entero_Mu_NC_000929: hypothetical protein; CNE_1c11940; phage(gi9633529)       3.67e-07            CupriavidusnecatorN1MKSITIKPVEGRLVRDPATGREIAEPTPVDGDDPFWIRRLADGDVAEVTNTAASGQPARGDK
1214952..1216433                   PHAGE_Entero_SfMu_NC_027382: tail sheath protein; CNE_1c11950; phage(gi849255269)     1.46e-130           CupriavidusnecatorN1MGQISFNQIPVNLLTPGAYVEFDNSKAVSGLVVMPNRILIIAQMLAAGTATANVPFQADNLAGVQARCGRGSHAALMFEAVLRITDSIETWILPVADSGGGVAATGTVALAGTPTAAGTLNLYVAADRIQVAVATTDTPTTVATALAAAINANADLPVTATSAAGNVTLTARNKGTLGNDIDLRLNYYPLSESTPAGLNVTITAMASGTGDPSIATAIAAMGETQYNTVLMGLSDASNMALIETELDARWGPLRQNDGRVHTAVRGTVGSLNTYASTRNSPHVVAWSVEQGGSPSPVWEHAAIWGAICAFYLGGIDPARPVQTLVGAGLLPASAEKRFTRAERNNLLSYGMATCIANPGGQLAAERAVTMYTQNASGIVDPSYRDVETMYTLSYLRYSVRARISQVYPRHKLANDGTVFDAGQAIATPTMIRAELIALFRDWEEAGLVEDFDQFKADLQVVRSGTDANRVDVLLPPNLVNQFRVFAAQIQFRL
1216482..1216847                   PHAGE_Escher_D108_NC_013594: tail tube protein; CNE_1c11960; phage(gi281199684)      5.37e-07            CupriavidusnecatorN1MAGKQVMGRAFITVAGQRLASVPGSAKLNTGGVERTPQVSDAGTVFYTEKPVQSEIECDILITADTDIIALNSTTDAVVLFQADSGQSYMVRNGAMASPLNPQAGDGKASVKMFGAPAEAV
1216847..1217176                   hypothetical protein; CNE_1c11970                                                    N/A                 CupriavidusnecatorN1MAALANIKVTLSEPIKLKGGGELTELVMARPKARHLRTMEMTAKPSMGMILDLAAELAGLTPEEIDDLEAADAMEVVTELGPFLVKDDGTKPLPSSPTPSTSPQTPSGT
1217256..1218977                   PHAGE_Synech_S_CBS1_NC_016164: tail tape measure protein; CNE_1c11980; phage(gi356870809)     2.58e-11            CupriavidusnecatorN1MADTNKAEIVITALDRASATLQRIGEKFDSVTKPVGRVQEAVGRFTDATGFSKMGGAVSGLTEKLKGLATVSVGLGVGYSVALGGIVATAKAAADAVDQVGDLSSRYGVASQDVQVFGGFVSEAGGNMDDAAKALGKLNKNMSLARAGSKEMQGAFASAGISMADLRSKTPAEVLFKMAEAAKASEKEGAKLATLEAVMGKSGSIMLDALNKGGDELKDRYKQMTADGALFTEEQISQADAFDKSWQRMSRTVEGVKNALGLKLANAMQPLVDRMQAWVVANRAMLESKVDKFAEALPGVLSDVVDVFEGLWNVAVKLGAAFKALKTAIGPTNAVLAVMAPILAPVALAVGQVVFAFGRFAWIMGNGLFIMLPKLIGLIRLVGAAFMANPILAVVGVLAAAAFLLWQNWDWVIGRLAAAWQWLADMASAYVNLVVGFWSGMGQALMAVFTGDWERLGQIVQGALDTIKGWFPGLYDVFVSVWDRIVAWFAPKMQALTSILPSWLTGGSVNVTARGVPAAPVAAQVIAGGQAQRQEVGGRIQIELSGAPAKVTDMRSNNPNVPLDVSSGMYAFG
1219041..1220204                   PHAGE_Entero_SfV_NC_003444: tail/DNA circulation protein; CNE_1c11990; phage(gi19549005)     1.65e-43            CupriavidusnecatorN1MSWRDELRPASFRGVAFETRGHELGGGRRLARHEYPQRDEPYLEDMGKKAREYKVQAFVIGPDYRAARDALLEALEQSGPGELVHPFFGRRSVVAGEFGLKESTEEGGMATFSLVFTEAGKLAEPDVDIDLPAELLASQETAFDEVANDFAESFDVSGLPAWSLDDIEAAINDFLSLDAFKAVANEVSGFVSRVADLVMRPVDFANSVIGLVRRLTDVSSILSTPYMPVRAWRTQSVQAETTTRGVVAKQQAAVNMLFHRAALVQETATLQATDGPTALETRQQVEAARQLVLEHFDTHDVTPGLPRPAPALAAALKALQVNTLVYLRRQSAALPQVYALQLLEATPAVVLAYDLYQNLRADEIVRRNAVRHPGFVPAGVPLEVTSQ
1220201..1221400                   PHAGE_Entero_phiP27_NC_003356: putative tail protein; CNE_1c12000; phage(gi18249913)     1.29e-50            CupriavidusnecatorN1MSEDRNKLTLRVGGQVFGGWTAVRIRHSIEQIAGTFDISYTERWPGQTDGWVIPAGEACEVRIGEHVVITGYVDKTSLSYDASSHTIRVTGRDRTGDLVDCSAPSQAFSGMTFKQLADTLCKPFSITVYDETVDEKKLTVSQKKAGKKGTPPKSARVGGALPKAACQNSESVFRILQRLAKNEGVLLVSDAEGGLLLTRAGRAGTISAPLELGVNILAAEYEHSQANLFSEITVKGQASMQDADSAGGKFENWISPKHTVSRGSGGTKTGNSEITRYRPLIIVAEAQADARRVKQRAEWEASNREAKSRTYKATVQGWYPSADDGDIWRINSLVRVRDPWARIDEDWLLAAVEFNLDEAGSRCTLELTSPKAFEELPELPQPAAGASGAGASGGKMEKW
1221400..1221963                   PHAGE_Entero_SfV_NC_003444: tail protein; CNE_1c12010; phage(gi19549007)             1.77e-49            CupriavidusnecatorN1MLEAIQTMLEPVKNKVGLMVGRCVLRAITDTGKLQRVQVQALADETHDDVERVQQYGFTSVPFAGAEGVVVFVGGNRDHGLVIAVDDRRYRLVGLSAGEVALYDDQGQKVHLTRTGIVVDGAGKDIHFVNAPTVFIPQDLHVGRDIIADRDISDQGGTKSMKGMRTAYNGHRHVETGSTTNTPDAGM
1221963..1222421                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; CNE_1c12020; phage(gi23505464)     5.39e-24            CupriavidusnecatorN1MDIELFWSTDLGRCEWRQRPDGQLAVDHDLKTAVLISLFTWRRAEADDILPDPRGPRRGWWGDLLAARPIGSRLWLLSREKQTAEVVRRAREYAEEALAWLLDDGVCASVEVITEIVQTGMLGLRCRFTRPDGTAVAYQFDFAWRNLSNVTS
1222423..1223475                   PHAGE_Entero_SfV_NC_003444: tail protein; CNE_1c12030; phage(gi19549009)             6.61e-60            CupriavidusnecatorN1MAYQRPELMDLRDAAYAAIEAIPGADARLRFAVLNALAVMTAGAADGLYGYQEWISKQILPDRAEKEFLDRYASLWLSGGRKQATGGAGLVTVSGTDGTVVPAGTLFIRSDGVQYASQADATVATGTASVSVLATTAGLSTNAVMGQSLTLVTPVPGLQSTAAVGVAGLTTGTDVESDDDLRARLLQRLQQPPDGGSAADYVQWALSVAGVTRAWVAPLELGPNTVVVRFVRDDDASIIPDAAEVAAVQAYIDSVRPVTAEVTVVAPVAMAVNFQIQLTPNTVAVRAAVEAELRDLITREAIPGGTILLSHINEAISLAAGETDHVLTSPSANVAAPVGQLAVFGSITWM
1223466..1224131                   PHAGE_Entero_SfV_NC_003444: tail protein; CNE_1c12040; phage(gi19548988)             6.59e-30            CupriavidusnecatorN1MDVTVTHYRQQLLRLLPQGPAWPQDEGDLAVRVLNALALTYLSVHKAAEQLHEESDPRATSALLDDWERNYGLPDLCLTPPVSVADRRARLVRKVVWGGGQSRAFFLGFLSSLGYPIEPGDPSGAAMDLDFVNQSYRTDGYVTITEFRPFRANSKCNAALNQGGWRYAWRVNVPSTATVRAMTAAARCNEPLGSWGDPGLYCLLAQHKPAHTVLYISYGSS
1224156..1225352                   PHAGE_Rhodob_RcapMu_NC_016165: putative tail fiber protein; CNE_1c12050; phage(gi356870896)     4.91e-33            CupriavidusnecatorN1MLVNKAFSDLITFTRASPAWRFNASGILVQDAANTPRVDCDPLALQPRGLLLEEGRTNLITYSAGLENAAWSKSNCTVTPAAGVAPDGTTSACKVIGASGASARYLASAAATASNALVVGSIFAKAGEHSKFRLNLTNFASDSRGVYVDLATGAIYQTDTSGSDFTGISGSMTSVGGGWYRCVVLALKGAANSVVRLAIDPKDNSGAASGDGTSGIYAWGGQLELGAFPTSYVPTTSAAVARAADAASITDLTKIGLNPVQGTLYAEFVAPNMTVAANQSIFSLSDGTTANRIQPFINAGVLTTRVTTAGVAADFTSAISGASAVHKLAIGCAAGSAALSVDGGAAAQTSPTAFPAVSRLYLGSTFDGLGFFLNGYLRALRYYPRKLSNAELQALTAA
1225412..1226386                   PHAGE_Entero_SfV_NC_003444: hypothetical protein; CNE_1c12060; phage(gi19548989)     6.42e-17            CupriavidusnecatorN1MRRISTSTKVTDKFGAGKHGFTNGNAVGGIPATDLEDVWFDHAQEEICSPIEAAGLALDSNDRTQLLQAMQILSAPIVGLMRKARMSVTAASASATFLADQIVVATALGGKHYRLSGFSKTVNLATTGAGGMDTGSAPTSGYVALYAIYNQTSGASALLATNATSAVASHVYSGANMPAGYTASALVSVWPTNGSGQFTVGQQQDRDIYRNSTSVLSTTTSATSVPFTSLSISSAVPPNAVRVKGTRTITFTSATGCAPSFAFAPDSGGSGGNLMYVSGSTSSGPNWGMDFESLVVTQQTLYYAIGNSAAVSVTYAASIVGYSI
1226716..1227501                   hypothetical protein; CNE_1c12070                                                    N/A                 CupriavidusnecatorN1MPDNSHAAWREVRILVDFYRRGDHRNGSTGIFSPKFGLKTKVSGEQFLQFVREQRDADVWIINPFPTIAYYSYNVWMQGEINHPGLTERAQGLLDSCGIGWDLARVPRQTNAVLCYSNFWVGTSAFWEGYVGGVLDPIARYLEASPDTPVAKAVMGDTWHTDAAPFLPFIVERLFSTYLSLQPSVRIASYPIESILDYCLTDFERELVERMRPSVDAADRAGAFPKELAEMQGLLCSLYKRYAIEHFAVNAHPHSGKTVAA
1227589..1228230                   PHAGE_Cronob_ENT47670_NC_019927: putative endolysin; CNE_1c12080; phage(gi431810515)     1.10e-74            CupriavidusnecatorN1MDKQVFRQAAGLSSELAERWYPVVSAALFEFGILAPHRVTAWIAQVGTESAGFARLQESFDYSVDGLQRTFGSRMPPALASTLGRQPGERAVPAERQARIASIVYAKRFGNGEAASGDGWRYRGRGLKQITFADNYHDCGHALGVDLDSQPDLLATDDQLAARSAAWFWYAKGCNQLADLGDFEQLTRRINGGLNGLDDRRQRWQRAQQFIHA
1228253..1228549                   PHAGE_Burkho_KS9_NC_013055: holin gp22; CNE_1c12090; phage(gi255033753)              3.56e-25            CupriavidusnecatorN1MQEPEKSLFMLVVVGAMIGLGKLLASDEAITVRLVFARTVMGAAASMVAGMALIQFPELNPVALVGLGSAFGIVGAQALESYFKRRLRQSEGRHGKGT
1228533..1229072                   PHAGE_Burkho_Bcep176_NC_007497: gp56; CNE_1c12100; phage(gi77864681)                 3.56e-17            CupriavidusnecatorN1MAKALEFLAAWKSRLVAAFLMVAVGAVLGGVLAWWLQGNRYERQLSECGRELAELHAEQARQVAEAVNAARLEEQRRTAAQTEIANAAIQQAEAARVDARAADTARRELLARATALANASRGPGDPATVGGGAPAATPVDLLADVLGRADARAGELAAALDASHGAGRTCERSYDALTP
complement(1229092..1229472)       hypothetical protein; CNE_1c12110                                                    N/A                 CupriavidusnecatorN1MATKELPRDLPALTEEELRDIGQRVRNQDVRDLLWEIARLRQTVQRAHYIAELLYSQGGVMADSWLRQLMEEPCIVEALEADYGSRTPGSRGWRGDVRTPEHEVRLATIQAEARGRIAKRRTRART
complement(1229477..1229725)       hypothetical protein; CNE_1c12120                                                    N/A                 CupriavidusnecatorN1MATTIFLEAHYFGEDREELRLPCDAVAAAAGGLVITGIELRPLQRLKWRPDHLSYWDDGQLLRLAVGPWVTLAPMTVRFTLR
complement(1229780..1230412)       PHAGE_Sinorh_phiLM21_NC_029046: ATP-dependent DNA ligase; CNE_1c12130; phage(gi981221107)     3.81e-25            CupriavidusnecatorN1MATRPSPPPDLTHFQPMLAERRLALPRSGSWHYEIKFDGYRMLAATGTPALRLRQGSDATTWFPELAADLARLPAGAVLDGEVCVLDDIGRPDFDRLHARALRRRWYPGADLVVLCAFDLLAYCGRDLRALPIEQRKAQLQQLLAGTTTGLLYVCAVEDGAWLYHQVLQLKLEGVVAKRAGSVYTAGLSPDWLKIKRPGAVPPGRFRRGG

#### region 2 ####
1361982..1362392                   PHAGE_Bacill_G_NC_023719: gp239; CNE_1c13360; phage(gi593777695)                     9.53e-17            CupriavidusnecatorN1MNDRDANSMTAAALGEMSDRQASSLDDAMPDNRATEVPTLTKAELAEMLFDQVGLNKRESKDMVEAFFDVIREALEQGDSVKLSGFGNFQLRDKPQRPGRNPKTGEVIPITARRVVTFHASQKLKGLVEERAGIAG
1362509..1362934                   transcriptional regulator MerR family; CNE_1c13370                                   N/A                 CupriavidusnecatorN1MSDKSSDRIALPPIPAKRYFTIGEVSELCAVKPHVLRYWEQEFTQLKPVKRRGNRRYYQHHEVLLIRRIRELLYEQGFTINGARNRLDEGRHHSGAAAAPEAAEVGEENAAALSVDISGLRNELVEVQHLLAQLREIAKHG
1362990..1363066                   tRNA                                                                                 N/A                 CGGGGCGTAGCGCAGCCTGGTAGCGTACCTGCATGGGGTGCAGGTGGTCGGAGGTTCAAATCCTCTCGCCCCGACCA
1363017..1363053                   attL                                                                                 N/A                 CCTGCATGGGGTGCAGGTGGTCGGAGGTTCAAATCCT
1363195..1364499                   hypothetical protein; CNE_1c13390                                                    N/A                 CupriavidusnecatorN1MSDHDPAEDFINEHQAEIDTRVALFDKVKERCAAANLATSDDINLEDDGPALIVHMACGRGTREVKLEEASQAQSFLDMDFERYRFLPGYDAIFCPDTGELEALLRQLGSTLQQVSLVTRARLLGKSETRGRVRMQSLEVTGENSTKAILQPESSVLSALLARPSRVSLKISQPGLTSAEEFEKVLVKLSNALFFQVEHLSGIGLGLVRHRPQPAPRSKQSRTNLAEVIQFPTMEYDEAPISLYWYGRNASGIPLLQFLAYYQVLEYYYPVYSKAEANRRVRHVLKEPGFRADRDADVNRLLGVIQAARGGGFFDERAQLSATLKECLDEGELREFFAADEDRKAWFIKSEKQSVLKVRAIPLNDSRADLVSEVAERIYQIRCKIVHTKAEGGAGEVELLLPYSREAESLTHDIELVRYACQKVLICASVPFQL
complement(1364501..1365619)       PHAGE_Burkho_phiE125_NC_003309: putative site-specific integrase; CNE_1c13400; phage(gi17975195)     1.22e-94            CupriavidusnecatorN1MNARRRTKPDGLPSRVYIRYGSYFWVRNTDEKWIKLCRVDEGETRMFERLAEEKRKTDVDGDEGSMSRLVAIYMEQHAKHYAESFRDEWCRRGEDVRKAFKRHGIEEIDPGAVQDFLLGNWPDKLPTQTAMKGWLSKFFAWAVLRRHITINPCREVALKKPKMRKVYIPHGHFLAIRAALAAYKYKKAVRGEVQEVTAKVPTGPEMQVFVDLCYLTCQRSTDIRELRWSQVDRHAGVIHFVPSKTADSSGEAVDWPITPEIDEVLRRAKELRRSIKVQALADDFVLVDRSGKPKTAAACRDAWRDALVRAKLEGKDYTVKDIRAKALTDAKKAGYDIEALQVAGAHTDRATTEGYIKQRDVPVSTVRLSIPR
complement(1365616..1365912)       PHAGE_Burkho_phiE125_NC_003309: hypothetical protein; CNE_1c13410; phage(gi17975196)     9.66e-16            CupriavidusnecatorN1MTEEAQRIIAITRQHWEQQVDNRLMSEQDLQDVTGLKRRSLQVQWFQRHFGVTPVQRADGRVIMTWSAFEGLQAKRAGVLPGASAPTRTPLIPIRKAA
complement(1365909..1366433)       PHAGE_Gordon_BetterKatz_NC_031247: hypothetical protein; CNE_1c13420; phage(gi100069)     6.81e-28            CupriavidusnecatorN1MKRLIETTLDGEAGCILSDCEQYRYRLWRDWDRSTPGLGFIMLNPSTADHLVNDPTVTRCMQRALAGKYGRLEVVNLFPLRSTDPEGLLTHPAPLGDRPDRNECAIMDALDRCSLVICAWGAHKAAPARAAEVLRIIRMCGRGTLLHHLGLNKDGSPKHPLYIAASTKPQRFTA
complement(1366444..1366920)       hypothetical protein; CNE_1c13430                                                    N/A                 CupriavidusnecatorN1MGLGRGLQEAAMTDFILKPKRPAGTGWLLDSSDLAQEAIRRAGVGSWPCEVWLHRQHGICVFSAVEVAREAGQPDLGPEYHLSISQHGGRISAADALWVLAQFDLLDAKEDNHVPHGLVRNFWRPVADRLSGYECPCQGEEPAIREDKGDYVWRGVTK
complement(1366884..1367516)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; CNE_1c13440; phage(gi56692934)     5.15e-43            CupriavidusnecatorN1MKGRPILFSGAMVRAILDGRKTQTRRIVKPQPEVNEQGNLVGDWLAKPLDGLLLPRLQDITIHCPYGKPGDRLWVRETWAQPTAMDPGPTVYRADYPACVPADFTNIPPAEAITWKPSIHMPRAMCRLALEVTGVLVERLNDCSEADAAAEGVWRDCEVPFNGPWFASQDSHVGFADPRGAYQNLWDNIKGAGAWDSNPWVWVVDFRRLP
1367552..1367800                   hypothetical protein; CNE_1c13450                                                    N/A                 CupriavidusnecatorN1MAPMTKFFDKKLEDELGTAAALQIAALGADVRATMDRMNAIRVAQGKPTLEQEMAELEAFEQEEIRSGRAKPEDFEWEPPLD
complement(1367803..1368867)       PHAGE_Burkho_phiE125_NC_003309: putative DNA cytosine methylase; CNE_1c13460; phage(gi17975218)     2.03e-143           CupriavidusnecatorN1MLTNHCYQGDCREVMRELIAAGVRVQCIVTSPPYWGLRDYGVHGQLGLEASLPEFLANMVEVFVLCRQLLADDGTLWLNMGDSYAGSRGAPWGPSPAATEARSMTASRRRDDTPIPRSDVRVEGLKPKDLVGQPWRLAFALQDSGWWLRQDIVWHKPNPMPESVHDRCTKAHEYVFLLTKSEKYFYDFEAMQEPVSGGAHARGAGVNPKAAPSGWDTSPGGHRQLKGRYSGTGVGFGRGYDKVVKPRVKQNASFSAAVTESVGTRNRRSVWTIPTQSFDGAHFATFPESLVEPCILAGSRPGDIVFDPFMGSGTVASVAQRLGRRWLGAELNPDYIALLAERTRQLGLVLESAA
complement(1368861..1369559)       hypothetical protein; CNE_1c13470                                                    N/A                 CupriavidusnecatorN1MIGMNSELLFDQVFAKTGIHAIDIVYVQLRSPRVSPRFEGFIGCMGALVLLLRFPQRLSKVGQGKRQVGHGKHDFRLSDLVERYRCHCASRLLDALHDCGNASKDERRRIDVEIGREQQTFRSDCSIYPSFGNCSDGVAHALGLSYLCLFLKSISGTLLTQSQEICPCNRRNRSGGLHPTCHKAGIVRLSHCRSGAKNRYRDDGNSAAKCPKHGLPPLHLFSSLLARGIVAC
complement(1369556..1371346)       PHAGE_Pseudo_phiCTX_NC_003278: hypothetical protein; CNE_1c13480; phage(gi17313261)     0.0                 CupriavidusnecatorN1MIRREYKTFGFCCGLGGGAKGFKKAASQVGNMVATWRCIGGIDVDPAAARDFETLVGVPCTVMDLFTRQQYTAFHGKEPPAGWREAMPSDIRRAASNERPNCVFISSPCKGASGLLSETLSRTPKYQALNELTLRCVWLMCEAWKDDPVELIVFENVPRLATRGRHLLDQINQILRHYGYAVNETTHDCGELGGLAQSRKRFLLVARHMERVPAFLYEPELRRLQGVGTVLGRMPQPGDAAGGPMHRVPSLQWKTWVRLAFVEAGSDWRSLNRLEVVNGHLRDYLIMPERRNGALGVLNWDEHAGAVAGESLPSNGTFSIADPRGPANAAQYQQYGVLRWGEASGTITAGTNPGQGTFSVADPRHAGPAKHNNEFRIVPWQQAAGAVTSAHGTGQCVQDPRASMGFEGAGKYRITGYDEPAGTVIARSDTGQGAYAVADPRPGMRRERGDNYLTGGHYGVVSWDQPSGAVSAAAGHDNGRWSVADPRLPAANDKLVAIIRALDGTWHRPFTTLELAAIQSLIEPEEYLELDGLSDQAWRERIGNAVPPDAAQAIAEVMGTTLLLAESGETFMLSATPVWVRPVAVALSVAQPAEVA
1381357..1381393                   attR                                                                                 N/A                 CCTGCATGGGGTGCAGGTGGTCGGAGGTTCAAATCCT
