gi|00000000|ref|CP002933.1|  Borrelia afzelii PKo, complete genome. 903609, gc%: 28.31%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(391006..392031)         PHAGE_Lactob_Ldl1_NC_026609: ATP binding cassette transporter; BafPKo_0381; phage(gi764162117)     2.02e-17            BorreliellaafzeliiPKoMRIAIFIFGILLTSCFSKNGIESGSSKIKISMLVDGVLDDKSFNSSANEALLRLKKDFPENIEKVFSSAVSGVYSSYVSDLDNLKMNGSGLIWLVGYMLADVSLSVSLENPEINYGIIDPIYGDDVQIPKNLIGVVFRIEQGAFLAGYIAAKKSVSSKIGFIGGVKGDIVDAFRYGYEAGAKYANKGIEIVSEYSNSFSDIDIARVMANKMYSKGIDIIHFAAGLAGVGVIEAAKELGDGYYVIGADQDQSHLAPKNFITSVIKNVGDALYLITSESLKNDNVWEGGKIVQMGLRDGVVGLSNANEFEYIKDLERKIINKEIIVPCNQEGYEIFIKQILKL
complement(392118..393137)         PHAGE_Lactob_Ldl1_NC_026609: ATP binding cassette transporter; BafPKo_0382; phage(gi764162117)     3.54e-31            BorreliellaafzeliiPKoMNKLLLLILFEGVIFLSCSGKSGLESGIPKVSLVIDGTFDDKSFNESALNGVKKLKEEFEIELVLKESSTNSYLSDLEGLKDAGSNLIWLIGYKFSDVAKAVSLQNSEMKYAIIDPVYSNEPIPANLVGMTFRAQEGAFLTGYIAAKVSKTGKIGFLGGIEGDIVDAFRYGYEAGAKYANKDIKIFSQYIGSFSDLEAGRSVATKMYSDGIDIIHHAAGLGGIGAIEVAKELGSGHYIIGVDEDQSYLAPNNVITSTTKDVGRSLNLFTSNYLKTNTFEGGKLINYGLKEGVVGFVRNPKMIPFEVEKEIDSLSSKIINKEVIVPYNKESYEKFLKEFI
complement(393181..393420)         basic membrane protein C; BafPKo_0383                                                N/A                 BorreliellaafzeliiPKoMLTDVSLSVSLDYIKNGVFKRRVVINQMLKEEVIEVVKDPDVLNNRLVDEVINLENKIINREIIVPDSEYAFDLFKSKL
393593..393790                     hypothetical protein; BafPKo_0384                                                    N/A                 BorreliellaafzeliiPKoMSSITPSTNIDILILLEPDSYSIPTQTRSQQNAEYKINPHTERFSISIIQTKIMCFLYLKIKNIN
complement(393799..394818)         PHAGE_Lactob_Ldl1_NC_026609: ATP binding cassette transporter; BafPKo_0385; phage(gi764162117)     2.33e-31            BorreliellaafzeliiPKoMSKLLLLILFEGIIFLSCSGKDGIENRIPKVSLIVDGTFDDKSFNESALNGVKKIKEEFEIELVLKESSTNSYLSDLEGLKDAGSNLIWLIGYRFSDVAKAVSLQNSEMKYAIIDPVYSNEPIPANLVGMTFRAQEGAFLTGYIAAKVSKTGKIGFLGGIEGDIVDAFRYGYEAGAKYANKDIKIFSQYIGSFSDIEAGRSVATKMYSDGIDIIHHAASLAGIGAIEVAKEFGSGHYIIGVDEDQSYLAPNNVITSTTKDVGRSLYLFTSNYLKTNTFEGGKSINYGLKEGVVGFVRNPNMIPFEVEKEIDSLSSKIINKEVIVPYNKESYEKFLEEFI
complement(394863..395924)         PHAGE_Lactob_Ldl1_NC_026609: ATP binding cassette transporter; BafPKo_0386; phage(gi764162117)     1.61e-18            BorreliellaafzeliiPKoMFKRFIFIALFLLVLACFQSNGKSAKSDKVVIGVLANGSFYDKGYNQSVYDGVVKLRDDFGVKLITKSLRPYPIEGKRLLTVNEAMTEDAYEVQKNPLNLFWLVGYQFSSLSVRLSYERPDICYGIIDAFDYGDIQVPKNSLAIKFRNEEAAFLAGYIAAKMSRKEKIGFLTGPTSEYLNDFKFGFKAGIFYANPKLRLVSKKAPSLFDKEKGKEMARFMYKEDKVGVILPIAGITSLGVYDAAKELGPKYYVIGLNQDQSYIAPQNVITSILKDIGKVIYSVSSDYIKNGVFKGGVVIDRGLKEGVIEVVKDPDVLNNRLVDEVINLENKIINGEIIVPDSEYAFDLFKSKL
complement(396238..397263)         PHAGE_Lactob_Ldl1_NC_026609: ATP binding cassette transporter; BafPKo_0387; phage(gi764162117)     1.19e-28            BorreliellaafzeliiPKoMLKKVYYFLFFLFIIACSGSDDNKSESKTVSLIVDGTFDDKGFNESSSNAIRKLKTDFNINIIEKASTGNSYLGDISNLEDGNSNLIWGVGFRLSDMLLQRAGENVSINYAIIEGVYNEIQIPKNLLNISFRSEEVAFLAGYFAAKASKTGKIGFIGGVKGEVLESFMYGYEAGAKYANSNIKVVSQYVGTFGDFGLGRSTASNMYRDGVDIIFAAAGLSGIGVIEAAKELGSDHYIIGVDQDQAYLAPNNVLISAVKKVDSLMYSLTKKYLETGVWDGGKTMLFGLKEDGLGLVLNENLKSNYSEIYDESLKIGQSIINGIIKAPYDKASYDNFVLQIAN
complement(397364..397837)         ribosomal protein S7; BafPKo_0388                                                    N/A                 BorreliellaafzeliiPKoMSRKNKKIKKKIFVDTRYNSRIVAKFANRMMYDGKKSISESILYSSIDLLADKLEDSDKMAVFCKALDNIKPLVEVRSRRVGGATYQVPVEVREERREALAMKWIIFAARKASGRSMKEKLSNELLNAYNSTGAAFKKKEDTHRMAEANKAFTHYRW
complement(397862..398236)         ribosomal protein S12; BafPKo_0389                                                   N/A                 BorreliellaafzeliiPKoMPTINQLIRKPRKSQTEKTASPALQNCPQRRGICTRVMTVTPKKPNSALRKVARVRLSNGFEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGAKDTLGVNNRKKGRSKYGTKKPKA
complement(398304..402437)         PHAGE_Yersin_phiR1_37_NC_016163: RNA-polymerase beta-subunit RpoC, N-terminus; BafPKo_0390; phage(gi358356757)     1.10e-18            BorreliellaafzeliiPKoMKEIKDFEKIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKDGLFCERIFGTTKEWECYCGKFKSVRYKGIICDRCNVEVTHFKVRRERMGHIELAAPVAHIWYYKYIPSRIGLLLDITASSLNSILYYEKYVVIEPGDTDLKKMQLLNEDEYIEARERYGMSFNASMGAEAIKSLLENLDLDELSSKLRIQMIDKDDKTDKKLLRRLEIIENFKISGNKPEWMIMEVLPVIPPEIRPMVQLDGGRFATSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSHKRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPAKMALELFKPFVIRRLIESEAVFNIKRAKNLIEQEVDEVWQILDLVIKEHPILLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCHAYNADFDGDQMAVHVPLTPSAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLYYLTMEKKNTVGEGKKFLNFNNVILAINNRSLDYNASIYVKIDGKYKKTTAGRVIFNEALPNGIEFVNKTLSDLELQILISKVYVVHGSSTVIEMLDIIKELGFKYATKFGCTISMSDIIVPDEKKAYIDRANKEIAKIQNDYAKGVITGEERYNNVVSVWLKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQIRQLAGMRGLMAKTSGDIIELPIISNFKEGLSVIEFFISTNGARKGLADTALKTADAGYLTRRLVDIAQDVVVRIEDCGTINGIKVETVKNGEEILESLKEKAVGSYSIERIKNPITGEIVLDANEEISEAKIELLEKIGIEKLVIRSVLTCEAEHGVCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHIGGVAQAGSEDDKISLKNTFILNGIEGFNVRVENGILFTRKGTLKIINVFYEEKIKNIKEIKVSDSQRVIKGIPLFVNNKGVEILSSYIGYVKLRDDKFLIVSEEQEVSLKAGTKLEIEVGEYVESGKVIGTFDPFAEPIIAEVKGKIKFKDIILGTTLKEEINTETGNVEKRITDNVFESLDPRIFIIDSGGVEIASYVLPGDAYLQVEDGQNINIGDIIAKLSKGSEKTQDITGGLPRVNDLFETRIPKNLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGDIVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKHIGVIIKQMMKKVKIVAVGDTNFVYGQKVDKHTFYEQNRKVIEQGGEPAIASPILIGVTKTSLNIDSFISAASFQETTKVLTDASIAGKIDDLRGLKENVVIGHLIPTGTGMGLYKKIKVSENVNSEV

#### region 2 ####
451837..452589                     PHAGE_Entero_EF62phi_NC_017732: chromosome partitioning ATPase; BafPKo_0443; phage(gi384519759)     1.12e-17            BorreliellaafzeliiPKoMKIISVINQKGGVGKTTSAINISYSMTLLNKKILLIDIDSQGNSTSGTNTSERITENSSYELINKKIKVKPLNHFKLDIIPSSIKLALLEKELINELSRENFLKNALTLYEKDKYDFIIIDCPPTLSILTINALIASNYLLIPIETEFFAFEGINQLIDTINTVKQINKTLEIAGVFINKYDIRNKTKEKYVSSLKKVFKEKLLNTKIRKNITISKSQEAKMPVYEYDKESNAAKDFLELSKEIINIIKE
452592..453305                     PHAGE_Strept_9871_NC_031069: hypothetical protein; BafPKo_0444; phage(gi100027)      1.09e-11            BorreliellaafzeliiPKoMSDNLETLMFLMGKKLETSSSNLENIEKKEIISIERKNFDYNKLDKDISDFLKTKQYEIFNIFNNTYTKIGKILKETQDKLKGNNQYNGLFYQWFKSMGFKKDKVYALISRYKLLVENSDKQLTIEKLPLSLSYEISKKSCPSILKTEVLNGKINSLKEFKIVYKKNFDLKDTHKSSLKKDEKYENDIKETLDFILKTIKEFKNIELNKLDQENLKLFFHSISEIKKKIKYIKNNLI
complement(453593..454375)         PHAGE_Gordon_Nyceirae_NC_031004: late promoter transcription; BafPKo_0445; phage(gi100046)     6.76e-09            BorreliellaafzeliiPKoMDGVFKMIDIQLLDIDNDQPRKSVSLVELEELSISIKENGILQPIIVCKVNERYKIIVGERRFRAAKLIQMTNIPVIEVNIKESCRDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLSEKIGKSRTYISNIVRILDLEQEILNAVHRKEISFGHAKVILSLKDKQDRYNLYLIILKKKFSVRDAEKYVKNFYKSITKKKEVEQDPFLSNIKEFLFDKIQTKIDIKGNQDKGKIEIEYFTAGDLRRIVSFFGHIN
complement(454493..456925)         PHAGE_Bacill_G_NC_023719: gp254; BafPKo_0446; phage(gi593777710)                     5.25e-115           BorreliellaafzeliiPKoMAVGENKEQILNVKIEDEIKTSYLNYAMSVIVSRALPDVRDGLKPVHRRILYSMYEMGLRSDKAFKKAGRIVGDVLGKYHPHGDQSIYDALVRLAQDFSLRYPVIRGQGNFGSIDGDPPAAMRYTEAKMARIAEYIVKDIDKETVNFKSNYDDSLSEPEIMPSSFPFLLVNGSSGIAVGMATNMAPHNLREICDAIVYMLDNENASIFDLLKIVKGPDFPTFGEIVYNDNLVKAYKTGKGSVVIRARYHIEERTEDRNAIIVTEIPYTVNKSALLMKVAFLAKEEKLEGLLDIRDESDREGIRIVLEVKRGFDPHVIMNLLYEYTEFKKHFSINNLALVDGIPKQLNLEELLFEFIEHRKNIIERRIEFDLRKAKEKAHVLEGLNIALNNIDEVIKIIKSSKLAKDAKERLVANFGLSEIQANSVLDMKLQKLTALEIFKLEEELNVLLSLIKDYEDILLNPVRIINIIREETINLGLKFGDERRTKIIYDEEVLKTSMSDLMQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIAIALCVNSHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGAQEEILTIKNSKDFTDDSYLLLTTASGKIARFESTDFKTVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLAVRENPYLLIISENGYGKRLSVSKISELKRGATGYTSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVAGKVSEQGKDARGIQVLFLDNDSLISVSKFIK
complement(456937..458841)         PHAGE_Bacill_PBS1_NC_043027: tail sheath stabilizer and completion protein; BafPKo_0447; phage(gi100209)     9.03e-97            BorreliellaafzeliiPKoMNYVASNIQVLKGLEAVRKRPGMYIGSVSVNGLHHLVYEVIDNSIDEALAGFCDRIDVIINLDNTITVIDNGRGIPTDIHEEEGISALELVLTKLHSGGKFNKGTYKVSGGLHGVGISVVNALSSFLEVYINRDGKIFRQTFSKGIPTSKVEVVGESSITGTKVTFLADSEIFETLDYNFDVLEKRLKELAFLNDKICISIEDKRFGKEKSSKFYFEGGIKSFVDYLTNDSKAYQSESYYIDGLMNDVIVNVGLKWTESYSDNILSFVNNINTREGGTHVMGFRSGLTKAMNEAFKNSKISKKDVPNLTGDDFKEGLTAVISVKVPEPQFEGQTKSKLGNSEIKKIVEIIVYEHLLKIINLNPLEIDLILGKAIKAARAREAARKARESERKKNAFESLALPGKLADCTSKNPLEREIYIVEGDSAGGSAKMGRNRFFQAILPLWGKMLNVEKTREDKVITNDKLIPIIASLGAGVGKTFDITKLRYHKIIIMADADVDGSHIRTLLLAFFFRYMRELIENGYIYIAMPPLYKIKYDNRIYYFYDEKEKEKFLNSIETKNRNSILLQRYKGLGEMNPTQLWETTMDPARRKMRLMNIDDAVEAEKIFVTLMGDLVEPRKEFIEQNALNVINLDV
459028..460485                     PHAGE_Bacill_PfEFR_5_NC_031055: RegA; BafPKo_0448; phage(gi100039)                   5.71e-05            BorreliellaafzeliiPKoMEKSKNIWSLILTEIKKELSEEEFYVWFENLCFLESVGDNIKISTPNLFHKNQIEKRFTKKIKEILTNNGYDNVTIVFTNQSPKTYSSKEESEKTTFNETFPTLDKLKGTTLSKEPLQSIKDRIKMYIKKEEEPKNFKNPFLKKRYTFENFIIGPNNKLAYNASLSISKNPGTKYNPCLIYGGVGLGKTHLLQSIGNKTEELHNNLKILYVTAENFLNEFVESIKTHETKKFKKKYRYLDMLLIDDIHDLQKKEGIQEELFHTFNALYEDNKQLVFTCDRPPSELTNFTDRLKSRFTRGLNVDISKPNFELRVAIIEKKAEEDGIKVPKNILNLVAQKVTTNVRDLEAAVTKLKAYIDLDNIEIDIDIVEKIIKEIIIYEKETTNEPSNKINIENIKKILLRELKIAHKDIEGHSKKPEITKARHIYAYLLRNFTELSTIEIGKIIGGKTHSTVLYSINKIDRDRNKDKEINNLITELMNKIKKN
