gi|00000000|ref|CP002968.1|  Escherichia coli W plasmid pRK1, complete sequence. 102535, gc%: 49.95%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(26..877)                PROPHAGE_Escher_MG1655: IS150 transposase B; WFL_23430; phage(gi16131429)            0.0                 EscherichiacoliWMKVLNELRQFYPLDELLRAAEIPRSTFYYHLKALSKPDKYADVKKRISEIYHENRGRYGYRRVTLSLHREGKQINHKAVQRLMGTLSLKAAIKVKRYRSYRGEVGQTAPNVLQRDFKATRPNEKWVTDVTEFAVNGRKLYLSPVIDLFNNEVISYSLSERPVMNMVENMLDQAFKKLNPHEHPVLHSDQGWQYRMRRYQNILKEHGIKQSMSRKGNCLDNAVVECFFGTLKSECFYLDEFSNISELKDAVTEYIEYYNSRRISLKLKGLTPIEYRNQTYMPRV
complement(874..1395)              PROPHAGE_Escher_MG1655: IS150 transposase A; WFL_23435; phage(gi16131428)            2.32e-124           EscherichiacoliWMSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEAGLRALKIGTKRNIAISVDPEKAASALELSKDRRIEDLERQVRFLETRLMYLKKLKALAHPTKK
1473..1907                         PHAGE_Yersin_fHe_Yen9_04_NC_042116: hypothetical protein; WFL_23440; phage(gi100356)     2.90e-16            EscherichiacoliWMTVSSTISVFCRDGVFRTVYCHLHGEPTWNGRILHTHYATGQQAEALVEHGDIRCLGPRCDKPAGHTLQNPVDGVTAYYGRDSGFRMDSEAREYRSFMEAIATESTEEVRFHYVFIDGYWKVMYRTPEGWKMKSLALALRRCPK
2001..2267                         hypothetical protein; WFL_23445                                                      N/A                 EscherichiacoliWMRPSIIFATAEYVKRLREECLRENKPLHRHTRFRRQELAQDEINPDVLAMSGHIARRCSEQKRVRIPAMKVSEWGHLLRALEIERVCH
2332..3222                         PHAGE_Sodali_phiSG1_NC_007902: transposase; WFL_23450; phage(gi89886005)             4.98e-94            EscherichiacoliWMSKKKTTTTPTPHDAAFRSFLANPDVARDFLELHLPAEYRQLCDLSTLKLEPATFVEPDLHQYASDILWSVKTTGGEDGYVYTLIEHQSTENLYMPFRMLRYSVAAMQRHLEQHKTLPLVIPVLFYHGERSPYPYSMNWLDCFENPALAAKIYTKPFPLVDITVVDDNEIMNHRRMAALTLLMKHIRHRDMMELLDKLPQVMVEISDEQVRVLIHYIVNAGDSVSPEFMRALAERLPQHEDKLMTIAERLEQKGRQEGALEKALAIACQLQKMGMTPEQIKQATGLSDDELKKITH
3285..3443                         hypothetical protein; WFL_23455                                                      N/A                 EscherichiacoliWMTIAERLIQKGALEVAREIAWRLRDMGWTPERIQEATGLSGEELKKLFPDEQ
complement(3474..3725)             PHAGE_Erwini_PEp14_NC_016767: hypothetical protein; WFL_23460; phage(gi374531851)     1.49e-06            EscherichiacoliWMTGWELRIWRKSMLWSREKAAREFGVTQRTWHAWENAEQVDVTVWRTTQALSVRDLLPHMQGMRKADIIRRLENELGETAEDV
4307..5155                         PHAGE_Pseudo_phiPSA1_NC_024365: DNA restriction methylase; WFL_23465; phage(gi658307732)     3.64e-18            EscherichiacoliWMNQTLPTADLNTAGTTDVIPSVAIDRIIAQRNEGIALFMQAMECLATARKILLDASGDIFLYGFEDCVTDSVRRMDKPEEAKRNITRLADRKIWDRLMTDTGMYTFMSSCQRDEWNSQLMSDTCPEITLDNVLATFHHLNASKMQTFEQGLIDVYRKLSWDYRTNNPCRLGKRIIIENLLYRWSNGRVTLDCSGREALDDLVRPFYLLEGRNVPDFRSSIGAQYGEFLGNGDNVGELFEGEYFTVRGYQKGTVHIVFKRPDLVEKLNDIIARHYPGALPTRV

#### region 2 ####
84164..84175                       attL                                                                                 N/A                 ATATCAGCACAG
84334..85113                       PHAGE_Mycoba_Squirty_NC_026588: non-functional integrase; WFL_23870; phage(gi764159894)     8.21e-07            EscherichiacoliWMTGLVTLGQLPGTAAQLPVSIDYPAALALRQMALVQDELPRYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRSDFSLTPPYPFVQLATLKQRTEKAARTAGRMPVGQQTHRLVPLSDAWYVSQLQTMVATLKIPMERRNKRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFSMPESDAVSMLKRIP
85294..85938                       PHAGE_Burkho_phiE12_2_NC_009236: gp12, partition protein; WFL_23875; phage(gi134288738)     4.13e-07            EscherichiacoliWMPVIANTHPKGGVGKTTSSVNIVGEMKSDTVDLDTHTGLSIILGLRPEGKEISVKVPKTVDELIEIMTPYKNSDKTLLIDCGGFDSDLTRTAIAFADCVIVPSKDSLTERIGLMHFDGVLDEISSIMGTDITAHLYLCKVNPNKKKFPKLDAILPSFKHLKLMKSRISARAEFEDVIETGMGITESVHGRYSAGGKEVIALIEEINHLIENNKQ
86025..86333                       hypothetical protein; WFL_23880                                                      N/A                 EscherichiacoliWMSKAKFSAQAEKLKNLVDSARLQTSSSAVTATAPSQPNEGAEEVSGRPVAARTKAKNLKAIPLSYFEAHAELKATSKTSLDFSSYIIEAIREKLERDGAIGQ
86747..87727                       PHAGE_Entero_P88_NC_026014: recombinase; WFL_23885; phage(gi744692717)               6.62e-106           EscherichiacoliWMKIFIDDGSTNIKLAWLEDGDVKTLISPNSFKPEWSFSLLDDAAPANYEIDGEKFSFDPLSADAVVTTETRYQYSDVNVVAIQHALQQTGLKAQPVDVIVTLPISEYLDANNQKNKQNIERKKKNVMREVRVQGSDAFVIRSVSVLPESIPAGFSVLAGLEDDESLLIVDLGGTTLDVSHVRSKMTGITKTWCDPNIGVSLITSGVKEQMAVHANTRVSSFQADNIIVHRNEPDYLSRRIYNAEQRESIINVINERQKLLIKRVNDVISRFTDYTHVMCVGGGAEIVAEAVKNLTKVPDERFYLSSSPQFDLVMGMIKMKGGVTNE
87720..88136                       hypothetical protein; WFL_23890                                                      N/A                 EscherichiacoliWMSDENKSRRCSFELFPDERTGDKIADELIANEKLKERGRFMRAMLVTGAAFAAIDKRLPLLISELLTENTTLDDINKVISSVIPGAFSVEKKLLELLEKQSGLHTSVDCSTPLTEQSLSRNDGEDQTRRNAENMFGDD
complement(88138..89412)           PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; WFL_23895; phage(gi431811050)       0.0                 EscherichiacoliWMFALADINSFYASCEKVFRPDLRNEPVIVLSNNDGCVIARSPEAKALGIRMGQPWFQVRQMRLEKKIHVFSSNYALYHSMSQRVMAVLESLSPAVEPYSIDEMFIDLRGINHCISPEFFGHQLREQVKSWTGLTMGVGIAPTKTLAKSAQWATKQWPQFSGVVALTAENRNRILKLLGLQPVGEVWGVGRRLTEKLNALGINTALQLAQANTAFIRKNFSVILERTVRELNGESCISLEEAPPAKQQIVCSRSFGERITDKDAMHQAVVQYAERAAEKLRGERQYCRQVTTFVRTSPFAVKEPCYSNAAVEKLPLPTQDSRDIIAAACRALNHVWREGYRYMKAGVMLADFTPSGIAQPGLFDEIQPRKNSEKLMKTLDELNQSGKGKVWFAGRGTAPEWQMKREMLSQCYTTKWRDIPLARLG
complement(89412..89849)           PHAGE_Cronob_ENT39118_NC_019934: protein umuD; WFL_23900; phage(gi431811072)         1.60e-26            EscherichiacoliWMSTVYHRPADPSGDDSYVRPLFADRCQAGFPSPATDYAEQELDLNSYCISRPAATFFLRASGESMNQAGVQNGDLLVVDRAEKPQHGDIVIAEIDGEFTVKRLLLRPRPALEPVSDSPEFRTLYPENICIFGVVTHVIHRTRELR
complement(89846..90094)           PHAGE_Sodali_phiSG1_NC_007902: ImpC protein; WFL_23905; phage(gi89886014)            1.19e-20            EscherichiacoliWMIRIEILFDRQNTKNLKSGTLQALQNEIEQRLKPHYPEIWLRIDQGSAPSVSVTGARNDKDKERILSLLEEIWQDDSWLPAA
90488..91414                       hypothetical protein; WFL_23910                                                      N/A                 EscherichiacoliWMPNWCSNRMYFSGEPAQIAEIKRLASGAVTPFYRRATNEGIQLFLAGSAGLLQITENIRSEQCPGVTAAGRGAVSTENIAFTRWLTHLQNGVLLDEQNCLMLHELWLQSGIGRRRWKGLPDDVRETITVHFTAKRGDWCDIWGSEDVSVWWNRLCDNVVPEKTMPFDLLTVLPTRLDVEVNGFNGGVLNGVPSAYHWYTERYGVKWPCGYDLNISSQGDNFIQVDFDTPWCQPESDVIAELSRRFSCTLEHWYAEQGCDFCGWQLYERGELVDVLWGELEWSSPTDDDELPEVTGPAWIVDNVAHYGG
91798..92481                       PHAGE_Staphy_Stau2_NC_030933: aerobic ribonucleotide reductase B subunit; WFL_23915; phage(gi100063)     1.99e-28            EscherichiacoliWMSRFVLGNCIDVMARIPDNAIDFILTDPPYLVGFRDRSGRTIAGDKTDEWLQPACNEMFRVLKKDALMVSFYGWNRVDRFMAAWKNAGFSVVGHLVFTKNYTSKAAYVGYRHECAYILAKGRPRLPQNPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESFTHPNAIVLDPFAGSGSTCVAALQSGRRYIGIELLEQYHRAGQQRLAAVQRAMQQGAANDDWFMPEAA
92482..92703                       PHAGE_Entero_N15_NC_001901: gp50; WFL_23920; phage(gi9630517)                        6.70e-07            EscherichiacoliWMNYAGHEKLRAEVAEVANAMCDLRTTMNEMEQRYSFNADTLPERLVRQTLFRANRLLMEAYTEILELDACFKD
92717..93151                       hypothetical protein; WFL_23925                                                      N/A                 EscherichiacoliWMYGTCETLCRELAVKYPGDMPLMLVIWSPEEIQALADGMDISLSDHEIRTVLARLEDIPEDQRTESGISSGVAMEIINNVSENRQVTVPAELLASLIQTAEQALWKREWAARDHGLAVPECVTRRQAVINQARTLLKNNRHEND
93197..93973                       YchA; WFL_23930                                                                      N/A                 EscherichiacoliWMNENTTLNALICRHARNLLLAQGWPEETDVDQRNPKYPGWISIYVLLDAPRLATLLINRHGGVLPPLLASAIQKLTGTGAELVLSGSQWQSLPVLPADGTQVFFPYAGEWLTEDEIRAVLDAVRDAVRSVSCRVAEDAQRIRAALTTTGQTLLTRQTRRFRLVVKESDHPCWLDEDDENLPVVLDAILNRGARFSAVEMYLVSECVEHILSSGLACDVLRIPDEPPRRWFDRGVLREVVREARAEIRSMADALAKIRG
94384..94809                       PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; WFL_23935; phage(gi162135127)      3.86e-16            EscherichiacoliWMQYAKPVTLNVEECDRLSFLPYLFGLDFLYAEASVYALAKQMMPEYEGGFWHFIRLPDGGGYMMPDGDRFHMVNGANWFDRTVSADAAGIILTSLVINRQLWLYHDSGDAGLTQLYRMRDAQLWRHIEFHPECNAIYAALD
95279..95290                       attR                                                                                 N/A                 ATATCAGCACAG
