gi|00000000|ref|CP003061.2|  Corynebacterium pseudotuberculosis CIP 52.97 chromosome, complete 2369387, gc%: 52.10%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
458602..459276                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; CpCIP5297_0427; phage(gi16129761)     7.79e-13            MLVLALDTATPDLIVGLVRVTSDTDTGVVVAQRILTDSRQHNELLTPTVVEILEESGQKFADIDRIVVGCGPGPFTGLRVGMVTAAAFGDALGIPVHGVCTHDAIANQLDGQALVATDARRKEIYWSLYSDGVRTMGPGIVAPTELSIPSRISTVSIPEKLGQLLPGPLRDVPQVNLRPLPECLVAVADFSQTPEPLEPLYLRRPDAKEPAPKPRSSAIPKVEI
459277..459768                     Ribosomal-protein-alanine N-acetyltransferase; CpCIP5297_0428                        N/A                 MFLRELTAADAPRCAELETLLFSEENPWSVEDLRAAINHSHTLYIAVVDSLEKGLILGYAGLAMLGPAHDPEFEIHTIGVDPQFQRQGVARLMMDNITFVADRAAGPVFLEVRTTNEPAIRLYESYGFERQGVRKNYYQPSGADAYVMMRTPSAVESNEESGK
459770..460825                     PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; CpCIP5297_0429; phage(gi16130960)     5.54e-75            MIVLGIESSCDETGVGIIELSPDGSMRILADAVASSMEEHARFGGVVPEIASRAHLEAMVPVMRQALDAAGVDKPDAVAATVGPGLAGALLVGASAAKAYAAAWDVPFYGVNHLGGHVAVANLEGEELPHSIALLVSGGHSQLLEVQAVGKPMKELGSTLDDAAGEAYDKVARLLGLGYPGGPVIDKLAARGNRKAIRFPRGLSRADDLRGEHRYNFSFSGLKTSVARYVEKAEREQSVISVEDVCASFQEAVCDVLTHKAILACQDTGAKVLLLGGGVAANSRLRELAAARCQTAGIELRVPRFKLCTDNGVMIAAVAAQLIHEGAPQSGLRIGTDTSLEVEIPLVYAAT
460987..461283                     PHAGE_Bacill_0305phi8_36_NC_009760: GroES; CpCIP5297_0430; phage(gi156564025)        3.07e-17            MANVNIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRFDGDDRVPMDIKEGDTVVFSKYGGTELKYNGEEYLLLNARDVLAIIEK
461295..462917                     PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; CpCIP5297_0431; phage(gi526178751)     3.11e-96            MAKLIAFNQEAREGILKGVDTLANAVKVTLGPRGRNVVLEKAFGSPTVTNDGVTIAREIDVEDRFENLGVQLVKSVAVKTNDIAGDGTTTATLLAQAVITEGLRNVAAGANPVELNRGILAAADKAVEKLGERAAEVASAADIANVATVSSRDAEIGDMVAAAMEKVGKDGVVTVEESQSIESYLDVTEGVSFDKGYLSPYFITDTDSQRAELDDPYILLVRNKISSLPDFLPLLEKTVEANKPVLIIAEDVEGEPLQTLVVNSIRKTLRAVAVKSPYFGERRKAFMDDLAVVTNATVVDPEVGINLNEAGVEVFGTARRVTVTKDETIIVDGAGTSEAVENRRQQIRREIENTDSSWDREKAEERLAKLSGGVAVIKVGAATETEVSERKLRVEDAINAARAAAQEGVIAGGGSALVQIAKELRVYAEEFEGDAKVGVNALANALSKPAYWIADNAGLDGAVVVSKIADLPNGEGFNAATLEYGNLIEQGIIDPVKVTHSAVVNATSVARMVLTTEASVVEKPVEAKPQAGGHHHHHHH
462983..463174                     Hypothetical protein; CpCIP5297_0432                                                 N/A                 MDDGSLNKLWLSRASSIALLRVPIRKDLPIFHKVQRIGEHVACNSSAPDTRNKFLLPGVHGTV
463296..463388                     Hypothetical protein; CpCIP5297_0433                                                 N/A                 MKGNSLYQWYVVGGKADSEHEEAAFLIVRA
463595..464185                     PHAGE_Bacill_Glittering_NC_022766: RNA polymerase sigma factor; CpCIP5297_0434; phage(gi568191091)     6.21e-05            MRMMEEKGLAVAETETELSSLVPRAAGGDSRSLQRVISIIYPKVLSYARIRLSGGRHPTPEDVAQEICLAVATSISKFVDQGKPFMAFVYGIASNKVADAHRAYSRDVANPTEDVPETEVELETPESFALVAAGSNRVKELLDLLGDKPREIITLRVFVGLSAEETAEIVGSTPGAVRVAQHRALATLRKALEQEN
464188..465069                     Hypothetical protein; CpCIP5297_0435                                                 N/A                 MTERRWARDGVEAAQSVEQLQADDQFLTHLSQGVDPTDGQDPLARLFLDARAEIQTNVPQAPTLAMLGLGSAEEFPTGELAPVTNESVDSSQLTDAPAAKVIELPRRRWNNAFAHALVGAAAATLIIAGGGTAIYNAGEGSALYALNQKFFGQTTNTEAVVALASKLDQANDLNAKGDKEGARQLLEQARELVNMLNARDRAQAEERIKEAERGSNVAPVPPPAEPEASSETVVTTMTTTVTETVTVEPTPARSTSTAPSTDRSATSSTSPVASTPSPTPAFELPQPEHSQAH
complement(465083..465493)         Hypothetical protein; CpCIP5297_0436                                                 N/A                 MLRQINMVKHVNFDWQMPRDPFADDPNDPASFLDEDEPLPPLSEAEKRHIEEDLRLVQRFKKVLQPRGINGIFFLCEDCNEEHYYDWDIMMENIRATLNGELSPVHEPSLNPNPQAYVPWDYCLGYLDGLEAPRFF
465633..467153                     PHAGE_Bacill_G_NC_023719: gp120; CpCIP5297_0437; phage(gi593777579)                  7.53e-34            MTQQRVSTGGDNPDKVALVGLTFDDVLLLPDASDVIPSEVSTSTQLTRNISLNIPIISAAMDTVTESRMAIAMAREGGMGVLHRNLSIEEQAQHVETVKRSESGMVTDPVTCSPDMSIAEVDALCARFRISGLPVVDDNGTLLGICTNRDMRFEQDFSIKVSEIMTRMPLVVAEEGVTKQQALNLLSANKVEKLPIVDKQGKLVGLITVKDFVKTEQYPHASKDSTGRLLVGAGIGVGEESWTRAGALVDAGVDVLVVDSAHAHSSGVLDMVSRVKKEWGDRVDVIGGNLATRSAAKAMIEAGADAIKVGIGPGSICTTRVVAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDLAKALAAGASSVMLGSMLAGTAEAPGEIVVVGGKQYKRYRGMGSMGAMQGRGLSGEKRSYSKDRYFQADVKSEDKLVPEGIEGRVPFRGSIEAITHQLVGGLRASMGYTGSATINDLWNARFVQITSAGLRESHPHHIQQTVEAPNYH

#### region 2 ####
1851902..1852210                   PHAGE_Strept_R4_NC_019414: putative scaffold protein; CpCIP5297_2267; phage(gi414089993)     1.40e-06            MSEVERLQADLEAARKAEETARAEIAKRDLDEERSKLAAEFKLPAAMAGRIAGATPEEMREDAKALAEAIGPHTGPADKSAGRGSTNASPFDLNADIAAHYN
1852225..1852875                   PHAGE_Strept_SF1_NC_028807: hypothetical protein; CpCIP5297_1682; phage(gi971745050)     4.27e-12            MAPITLEQAKLNTMEDYDPAIIDEFRKSSTLLDLLTFDRAVSPAGGGATLDYGYRRVKTERGAAFRKLNSEYKTEAATTEKHSVTLAPLGGAFEIDRVIAKLGPAASGEIVFQMQQLIKSTTTKFLDSVINGDTGTEADGFDGLNKALLSTSTEVKSEADWTKFTSADAGMAVLNDLDEFLAVLDGPPTALLDNGHVLATFLRTRGGSPIEKSAKP
1852916..1853293                   PHAGE_Rhodoc_E3_NC_021347: hypothetical protein; CpCIP5297_1683; phage(gi509142199)     2.64e-10            MTSYTAKAFREEGWWGVQLIERPNILTQTRRLDQIPDMVRDALKLFPEIEPHPETVTINVVVVGDIESQVAKTLELRNRAAKAQEEATASMRSTAKALHDQGLTYRDVGQLLGVTHQTAKNLATA
1853719..1853859                   Hypothetical protein; CpCIP5297_1684                                                 N/A                 MEPSLRVFQSFSFPASHTGTSRADPHTSLYSQIHNKLHTFIPYSIT
1853950..1854585                   Hypothetical protein; CpCIP5297_1685                                                 N/A                 MKKSKLFLCMALTTSLATASIPATAQESDPTVKEWLHEKCEGFSITVQSVHLKDKDQSRVPQWLRAKPNLGDTVKVQFKVTNNSYSDNAHSPHRKDDGNAYLVYDPLSVRNGVGVTIKPNPIYAWSNPDKNKNFILGRGDSVTVTYNHTITEQDLANRSIPDGPNYPISNSGTATPVCTISPGITYNWSPLSHFFPWLAGFLRSITSFFSR
complement(1854782..1856503)       PHAGE_Flavob_6H_NC_021867: cytochrome c oxidase subunit I; CpCIP5297_1686; phage(gi526120183)     8.20e-13            MTAVAPRLEDYSEPTRPAPTGGARKGTLAWKMLTTTDHKQLGIMYIIMSFVFFFLGGLMALLIRAELFSPGLQYLSNEQFNQLFTMHGTVMLLLFGTPIVWGFANYILPLQIGAPDVAFPRLNAFGFWVTMIGAAAMLSGFLTPGGAADFGWTMYLPLADSIHSPGIGSDMWIVGVGATGVGTISSAINMITTILCMRAPGMTMFRMPIFCWNIFVASVLVLMIFPLLTAAALGVLYDRKLGGHLFDPGNGGAIMWQHLFWFFGHPEVYVLALPFFGIVSEIVPVFARKPMFGYIGLVFATLSIGSLSMAVWAHHMFVTGAILLPFFSFMTFLISVPTGVKFFNWLGTMWKGHVSWETPMTWTMGFLVTFLFGGLTGIMLASPPLDFHISDTYFVVAHFHYTLFGTVVFASFAGVYFWFPKMTGRMLDERLGKIHFWITFVGFHGTFLVQHWLGNEGMPRRYADYLDSDGFTTLNQISTIFSFLLGMSVLPFIWNVIKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTSLPRIRSERPAFELHYPHMVERMRREAHVGHHVEPVTVKTK
complement(1856677..1856856)       Hypothetical protein; CpCIP5297_1687                                                 N/A                 MLWGGKGELTLYSSFGLITAGGEVGELVGVMYKYVPTLLCGAYHWNYLENAVFLAELIV
complement(1856972..1857958)       PHAGE_Mycoba_PegLeg_NC_021299: NrdG; CpCIP5297_1688; phage(gi508177953)              0.0                 MESYDSYLESHKKPVSAINWNSIPDEKDLEVWDRLTGNFWLPEKVPVSNDLKSWGTLNDLEKTTTMRVFTGLTMLDTIQGTVGAVSMIPDAITPHEEAVYTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKIVLSYYEGADPLKRKVASTLLESFLFYSGFYLPMYWSSHAKLTNTADIIRLIIRDEAVHGYYIGYKYQQAVREQTPERQEELKEYTFDLLYDLYDNEIQYTEDLYDDLGWTEDVKRFLRYNANKALNNLGYEGLFPADECKVSPAILSALSPNADENHDFFSGSGSSYVIGKAENTTDDDWDF
1858188..1858361                   Hypothetical protein; CpCIP5297_1689                                                 N/A                 MAYPKLILGNRLSWPLKKCGLYHLLAFHFTFSSISPLDKISIIKLGNPTRKIPVMLG
1858368..1858889                   Ferritin-like protein; CpCIP5297_1690                                                N/A                 MTHPILLLSIASMSINEKLAAALNNQITAELEASMVYLQLSYILDDLSLTGMRNWMQAQHKEELDHAAQFSKHLLDRDYRPQIGDIAPPKLDANSAVEAFEASLAHEQKVTAMIRELAEIADSVKDYDSRPLIDRFLEEQIEEEANVKEILDRLRIADTGSGILRIDAELAER
complement(1858962..1861109)       PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; CpCIP5297_1691; phage(gi158079505)     0.0                 MGKHVAEPVSRTEQLDYHALNALLNLYNADGKIQFDKDREAANQFFLQHVNQNTVFFHDLEEKIEYLVENNYYEPGIIEKYEFAFIKDLFKQAYAHKFRFKSFLGAYKYYTSYTLKTFDGRRYLERFEDRVCMVALTLADGDQNLARNLVDEIMTGRFQPATPTFLNSGKAQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNLREAGAPIKKIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILNFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGKAFADISVSEHYAEMVEDPRIRKSKINAREFFQTIAEIQFESGYPYIMFEDTVNKANPIEGRVNMSNLCSEILQVNTPSLFNDDLTYEEVGEDISCNLGSLNIAMTMDSPDFAKTIETAIRGLTAVSEQTAINSVPSIRKGNDAAHAIGLGQMNLHGYLGREHIYYGSEEGLDFTNAYFAAVLYQCLVASNKLARERGRTFVGFETSKYATGEYFDGFDPADFAPKTEKVAKIFADSSIYTPTAADWADLKDSVAAHGLYNRYLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVYYPAPHMDNENLDYFADAYEIGFEKVIDTYAVATKYVDQGLSLTLFFKDSATTRDINRAQIYAWRKGIKTLYYIRLRQVALMGTEVEGCVSCML
complement(1861272..1861709)       PHAGE_Bacill_SP_10_NC_019487: ribonucleotide reductase stimulatory protein; CpCIP5297_1692; phage(gi418489617)     1.22e-16            MLVVYFSSATENTKRFVQKLGFPAKRIPLHKSSPGLVVDEPYVLVCPTYGGGASISGGNTRPVPAQVIRFLNNEHNRSLLRAVIAGGNSNFGLDFGKAGDTIAAKCKVPYVYRFELLGTDEDVRLVRDGLLGNAAVLGLLPEPVA
complement(1861835..1862068)       PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; CpCIP5297_1693; phage(gi589892251)     4.29e-25            MSITVYTKPACVQCNATKKALDRAGLDYTLVDISIDDEARDYVMALGYLQAPVVEVNGEHWSGFRPERISSLVAQVA
complement(1862552..1862755)       50S ribosomal protein L36; CpCIP5297_1694                                            N/A                 MKACEWENAQITVKPLYGFSWRRKERPMKVRKSLRSLKNKPGAQVVRRRGKVYVINKKDPRFKARQG
1862909..1863739                   PHAGE_Bacill_G_NC_023719: gp283; CpCIP5297_1695; phage(gi593777739)                  7.94e-103           MDTLRDTIKNRLRTRSAIDPAEEITARVDFLAQYLSASGARGFALGISGGQDSTLAGRLAQLAVEKLRKEGYPAEFWAIRLPYGVQADEEDARTALAFIQPDHSVTINIKPATDACAADVAQALGLETLNDFNKGNVKARQRMIAQYALAGEKGLLVIGTDHAAENVTGFFTKFGDGAADILPLAGLSKRQGAQLLQALNAPDSTWLKVPTADLEEERPALPDEVALGVTYSDIDTYIEGSGEVSEKAATRIEHLWKIGEHKRHLPVEPGDTWWRR

#### region 3 ####
2360196..2361143                   PHAGE_Bacill_G_NC_023719: gp344; CpCIP5297_2129; phage(gi593777800)                  7.81e-66            MSEAPNATTVHDVAIIGSGPAGYTAALYAARAELKPIVFEGIEFGGSLMTTTEVENFPGFPEGIMGPDLMDNMRSQAERFGADLRMELVTKVELEGEIKKIWVDDQEFHARSVILATGSAPRYIGAEGEQTLLGRGVSACATCDGFFFRDHDIAVIGGGDSAMEEATFLTKFAKSVTIVHRREEFRASAIMLERAKNNDKIKFLTNKTVSKVLGENTVSGLELTDTATGETSILDVTAMFVAIGHDPRSDLFRGVVDTNDAGYVRVEEPSTRTNVPGVFAVGDLVDAHYQQAITAAGSGCRGAIDAENYLAALDA
2361205..2361528                   PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; CpCIP5297_2130; phage(gi100156)     1.50e-16            MNAPIALTEATFKTTVIDSDKPVLVDFWAEWCGPCKKLGPIIDEIAAEMGDEVVVGKVDVDAERNLGAMFQIMSIPTVLIFKDGQKVAEFVGVRPKSEIVAKLRSHQ
2361617..2362798                   PHAGE_Bacill_AR9_NC_031039: ss-DNA binding protein; CpCIP5297_2131; phage(gi100271)     7.67e-09            MSDILRVGDHSPRVAEVRTALTRLGLVPDSDKEIKQSKGQTFTDPETYFDEDLAEVIKGMQQARGIIASGEINEVTLRALREASYKLGARVLSFEPNNIFVGDDVVQLQTQLQELGFYTDRVDGRFGENTYKALLSYQVNYGLKSDGVCGPETIRAFGRLGRRITGGSPQALRERERVRDAGPMLAGKRVVIDPSLGGNSRGQVVQGPYGEITEEEILWDLATRVEGRMIAAGMETIISRPRQDNPSHLERADIANAFDADVMICLQCDQYQNDKANGVATFYFGSEAGTSSLTGEMLSGFIQREISARTDLVNCGNHGRTWDLLRITAMPTIEVVLGYLTNPHDVTILTDPKHRDAIAEAIVVAVKRLYLLDDDDQPTGTYKFAEMLEQGML
complement(2362850..2363437)       Hypothetical protein; CpCIP5297_2132                                                 N/A                 MEESAALRASAAGTPTLEKEAWLAAMLSAYGTCGFNITSADNFASGNPRAYATLLYCPASEAPGCARLPTAPLTSDAYVLTSLHCDPNMVGSGLETMLLDAAIVHLARQGIKALEAFARDESFCDDPFHPQPENIQRIVNSAEEIGLMTVELLESAGFEIIRHHPVLPLLRLHLPPEHALLTVEAIEPLLANVTA
complement(2363559..2364611)       PHAGE_Agroba_7_7_1_NC_019519: hypothetical protein; CpCIP5297_2133; phage(gi435844368)     3.30e-13            MAQETRKGGLGRGIGALITGSPAPGQRIGASAADVVFGGAAEKKRQSHSPRDAKGARISPIIAQAVEKQSAGSRGADQQLEEFGATYREIPIGLIIPNEKNPRSVFDEEDLAELVHSIREFGLLQPIVVREAADDRYEIIMGERRWRASSKAGLKTIPAIVRKTDDSEMLRDALLENIHRVQLNPLEEAAAYQQLLQEFGVTQNELADKLGRSRPVITNMIRLLALPVAVQRKVAAGVLSAGHARALLGVKGGEAPQVALADRIVAEGLSVRATEEAVTLMNRGEKPAPKKREKAPTPEFLTNAANRLADGLDTKVSVSMGKRKGKIVVEFGGREDFDRIMGLLGGNSEG
complement(2364617..2365609)       PHAGE_Natria_PhiCh1_NC_004084: putative plasmid partitioning protein Soj; CpCIP5297_2134; phage(gi22091150)     3.94e-27            MDDQNWEDTPIAAAARRAAQVLTPNSLHLPRPDSSRRLTVANQKGGVGKTTSSVNLAAGLAINGLKVLVIDLDPQGNASTALGVDHRAGTLSSYELLIGECAVEDALQETTASENLFCIPATIDLAGAEIELVNLVRREYRLSDALNTEYMQQAGFDYIFIDCPPSLGLLTINAMTAVDEVLIPIQCEYYALEGVGQLLNNITMIRQYLNPNLHISSILLTMYDGRTKLAEQVMDEVRGHFGDVVLGTKIPRSVKVSEAPGYGQTVLAYDPGSRGALAYLDAARELATRGDYVPSESSGPIGMSPEALREQQEQNQSDGEADHADETSKE
complement(2365714..2366385)       Ribosomal RNA small subunit methyltransferase G; CpCIP5297_2135                      N/A                 MKHEENNGTEHGLELTPPPEIAAEIFGSLLDKAVEYHRLLATDGSTRGFIGPREIPKLWDRHILNCAVIGEAMDSNARVADIGSGAGLPGIPLALARPDLEITLIEPLLKRSVFLGEVKDSLGLDNVTIMRGRAEEKVIRNELGLVDVVTSRAVAPLGKLAGWSLPLVRLGGKMIAMKGSSVKEELARDEKMIFKAGGGKIKIFTVGDQLEDPTTLISIRKVR
complement(2366570..2367526)       Inner membrane protein translocase component YidC; CpCIP5297_2136                    N/A                 MLNFIYWPISAILWFWHKVVSFVFDPGSGISWVLAIMLLTFTIRAFLVKPMLNQMHSARKMQELQPLMQEIRKKYGKDQQKMMAETRKVQKEVGVNPIAGCLPALVQMPVFIGLFHVLRSFNRTGTGHSQLGLSVEVNRETPNYIFSAEDVQSFLDARIFGVPLSSYISMPADMYKAFQPVDFTRVNIIAVAAPLILIIVVATHMNGRLSVNRQKARRESGLQAAPTSGQMQMQMDLMNKMMLWFMPLTILFTGVLWHLGLLFYMVANNIWTFFQQRWIFNKIDAEEAEEIEAKKAAKRATAPKPGQRPQNPKKGKKK
complement(2367582..2367869)       PHAGE_Haemop_HP1_NC_001697: hypothetical protein; CpCIP5297_2137; phage(gi9628603)     9.61e-08            MCYSHDQMSNENNNSRLVRPAGIISGLLYDAVRFYQKYISPLKMGSTCRFDPTCSAYALEAVSRRGAVIGTALTIARLAKCGPWHPGGYDPVPRR
