gi|00000000|ref|CP003077.2|  Corynebacterium pseudotuberculosis 316, complete genome. 2368850, gc%: 52.10%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
458782..459456                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; CP316_02240; phage(gi16129761)     9.05e-13            Corynebacteriumpseudotuberculosis316MLVLALDTATPDLIVGLVRVTSDTDTGVVVAQRILTDSRQHNELLTPTVVEILEESGQKFADIDRIVVGCGPGPFTGLRVGMVTAAAFGDALGIPVHGVCTHDAIANQLDGQALVATDARRKEIYWSLYSDGVRTMGPGIVAPTELSIPSRISTVSIPEKLGQLLPGPLRDVPQVNLRPLPECLVAVADFSQTPEPLEPLYLRRPDAKEPASKPRSSAIPKVEI
459457..459948                     ribosomal protein S18-alanine N-acetyltransferase; CP316_02245                       N/A                 Corynebacteriumpseudotuberculosis316MFLRELTAADAPRCAELETLLFSEENPWSVEDLRAAINHSHTLYIAVVDSLEKGLILGYAGLAMLGPAHDPEFEIHTIGVDPQFQRQGVARLMMDNITFVADRAAGPVFLEVRTTNEPAIRLYESYGFERQGVRKNYYQPSGADAYVMMRTPSAVESNEESGK
459950..461005                     PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; CP316_02250; phage(gi16130960)     6.44e-75            Corynebacteriumpseudotuberculosis316MIVLGIESSCDETGVGIIELSPDGSMRILADAVASSMEEHARFGGVVPEIASRAHLEAMVPVMRQALDAAGVDKPDAVAATVGPGLAGALLVGASAAKAYAAAWDVPFYGVNHLGGHVAVANLEGEELPHSIALLVSGGHSQLLEVQAVGKPMKELGSTLDDAAGEAYDKVARLLGLGYPGGPVIDKLAARGNRKAIRFPRGLSRADDLRGEHRYNFSFSGLKTSVARYVEKAEREQSVISVEDVCASFQEAVCDVLTHKAILACQDTGAKVLLLGGGVAANSRLRELAAARCQTAGIELRVPRFKLCTDNGVMIAAVAAQLIHEGAPQSGLRIGTDTSLEVEIPLVYAAT
461167..461463                     PHAGE_Bacill_0305phi8_36_NC_009760: GroES; CP316_02255; phage(gi156564025)           3.57e-17            Corynebacteriumpseudotuberculosis316MANVNIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRFDGDDRVPMDIKEGDTVVFSKYGGTELKYNGEEYLLLNARDVLAIIEK
461475..463097                     PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; CP316_02260; phage(gi526178751)     3.62e-96            Corynebacteriumpseudotuberculosis316MAKLIAFNQEAREGILKGVDTLANAVKVTLGPRGRNVVLEKAFGSPTVTNDGVTIAREIDVEDRFENLGVQLVKSVAVKTNDIAGDGTTTATLLAQAVITEGLRNVAAGANPVELNRGILAAADKAVEKLGERAAEVASAADIANVATVSSRDAEIGDMVAAAMEKVGKDGVVTVEESQSIESYLDVTEGVSFDKGYLSPYFITDTDSQRAELDDPYILLVRNKISSLPDFLPLLEKTVEANKPVLIIAEDVEGEPLQTLVVNSIRKTLRAVAVKSPYFGERRKAFMDDLAVVTNATVVDPEVGINLNEAGVEVFGTARRVTVTKDETIIVDGAGTSEAVENRRQQIRREIENTDSSWDREKAEERLAKLSGGVAVIKVGAATETEVSERKLRVEDAINAARAAAQEGVIAGGGSALVQIAKELRVYAEEFEGDAKVGVNALANALSKPAYWIADNAGLDGAVVVSKIADLPNGEGFNAATLEYGNLIEQGIIDPVKVTHSAVVNATSVARMVLTTEASVVEKPVEAKPQAGGHHHHHHH
complement(463194..463475)         PHAGE_Mycoba_Bernal13_NC_024135: WhiB; CP316_02265; phage(gi640883727)               7.35e-10            Corynebacteriumpseudotuberculosis316MNNTDLLPAPQAQLWDWQLHGACRGTQSEIFYHPEGERGLARRSRERQAKEICSLCPVLRNCRQHALQYAEPYGIWGGLSESERATMLSRRHG
463775..464365                     PHAGE_Bacill_Blastoid_NC_022773: RNA polymerase sigma-70 factor; CP316_02270; phage(gi568192089)     5.04e-05            Corynebacteriumpseudotuberculosis316MRMMEEKGLAVAETETELSSLVPRAAGGDSRSLQRVISIIYPKVLSYARIRLSGGRHPTPEDVAQEICLAVATSISKFVDQGKPFMAFVYGIASNKVADAHRAYSRDVANPTEDVPETEVELETPESFALVAAGSNRVKELLDLLGDKPREIITLRVFVGLSAEETAEIVGSTPGAVRVAQHRALATLRKALEQEN
464368..465249                     hypothetical protein; CP316_02275                                                    N/A                 Corynebacteriumpseudotuberculosis316MTERRWARDGVEAAQSVEQLQADDQFLTHLSQGVDPTDGQDPLARLFLDARAEIQTNVPQAPTLAMLGLGSAEEFPTGELAPVTNESVDSSQLTDAPAAKVIELPRRRWNNAFAHALVGAAAATLIIAGGGTAIYNAGEGSALYALNQKFFGQTTNTEAVVALASKLDQANDLNAKGDKEGARQLLEQARELVNMLNARDRAQAEERIKEAERGSNVAPVPPPAEPEASSETVVTTMTTTVTETVTVEPTPARSTSTAPSTDRSATSSTSPVASTPSPTPAFELPQPEHSQAH
complement(465263..465673)         hypothetical protein; CP316_02280                                                    N/A                 Corynebacteriumpseudotuberculosis316MLRQINMVKHVNFDWQMPRDPFADDPNDPASFLDEDEPLPPLSEAEKRHIEEDLRLVQRFKKVLQPRGINGIFFLCEDCNEEHYYDWDIMMENIRATLNGELSPVHEASLNPNPQAYVPWDYCLGYLDGLEAPRFF
465813..467333                     PHAGE_Bacill_G_NC_023719: gp120; CP316_02285; phage(gi593777579)                     8.74e-34            Corynebacteriumpseudotuberculosis316MTQQRVSTGGDNPDKVALVGLTFDDVLLLPDASDVIPSEVSTSTQLTRNISLNIPIISAAMDTVTESRMAIAMAREGGMGVLHRNLSIEEQAQHVETVKRSESGMVTDPVTCSPDMSIAEVDALCARFRISGLPVVDDNGTLLGICTNRDMRFEQDFSIKVSEIMTRMPLVVAEEGVTKQQALNLLSANKVEKLPIVDKQGKLVGLITVKDFVKTEQYPHASKDSTGRLLVGAGIGVGEESWTRAGALVDAGVDVLVVDSAHAHSSGVLDMVSRVKKEWGDRVDVIGGNLATRSAAKAMIEAGADAIKVGIGPGSICTTRVVAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDLAKALAAGASSVMLGSMLAGTAEAPGEIVVVGGKQYKRYRGMGSMGAMQGRGLSGEKRSYSKDRYFQADVKSEDKLVPEGIEGRVPFRGSIEAITHQLVGGLRASMGYTGSATINDLWNARFVQITSAGLRESHPHHIQQTVEAPNYH

#### region 2 ####
1851189..1851479                   PHAGE_Strept_phiELB20_NC_041849: hypothetical protein; CP316_08600; phage(gi100009)     1.16e-06            Corynebacteriumpseudotuberculosis316MQADLEAARKAEETARAEIAKRDLDEERSKLAAEFKLPAAMAGRIAGATPEEMREDAKALAEAIGPHTGPADKSAGRGSTNASPFDLNADIAAHYN
1851494..1852144                   PHAGE_Strept_SF1_NC_028807: hypothetical protein; CP316_08605; phage(gi971745050)     3.70e-12            Corynebacteriumpseudotuberculosis316MAPITLEQAKLNTMEDYDPAIIDEFRKSSTLLDLLTFDRTVSPAGGGATLDYGYRRVKTERGAAFRKLNSEYKTEAATTEKHSVTLAPLGGAFEIDRVIAKLGPAASGEIVFQMQQLIKSTTTKFLDSVINGDTGTEADGFDGLNKALLSTSTEVKSEADWTKFTSADAGMAVLNDLDEFLAVLDGPPTALLDNGHVLATFLRTRGGSPIEKSAKP
1852185..1852562                   PHAGE_Gordon_BetterKatz_NC_031247: membrane-associated initiation of head vertex; CP316_08610; phage(gi100034)     5.64e-10            Corynebacteriumpseudotuberculosis316MTSYTAKAFREEGWWGVQLIERPNILTQTRRLDQIPDMVRDALKLFPEIEPHPETVTINVVVVGDIESQVAKTLELRNRAAKAQEEATASMRSTAKALHDQGLTYRDVGQLLGVTHQTAKNLATA
1852688..1852910                   hypothetical protein; CP316_08615                                                    N/A                 Corynebacteriumpseudotuberculosis316MGSSSVKVMGFCATPKKINPRRIYIMDRAEKHYRAGHTNTPCGCKCFITRGTSYSPNLPQIRNFDPGQLG
1853220..1853855                   hypothetical protein; CP316_08620                                                    N/A                 Corynebacteriumpseudotuberculosis316MKKSKLFLCMALTTSLATASIPATAQESDPTVKEWLHEKCEGFSITVQSVHLKDKDQSRVPQWLRAKPNLGDTVKVQFKVTNNSYSDNAHSPHRKDDGNAYLVYDPLSVRNGVGVTIKPNPIYAWSNPDKNKNFILGRGDSVTVTYNHTITEQDLANRSIPDGPNYPISNSGTATPVCTISPGITYSWSPLSHFFPWLAGFLRSITSFFSR
complement(1854052..1855773)       PHAGE_Flavob_6H_NC_021867: cytochrome c oxidase subunit I; CP316_08625; phage(gi526120183)     9.52e-13            Corynebacteriumpseudotuberculosis316MTAVAPRLEDYSEPTRPAPTGGARKGTLAWKMLTTTDHKQLGIMYIIMSFVFFFLGGLMALLIRAELFSPGLQYLSNEQFNQLFTMHGTVMLLLFGTPIVWGFANYILPLQIGAPDVAFPRLNAFGFWVTMIGAAAMLSGFLTPGGAADFGWTMYLPLADSIHSPGIGSDMWIVGVGATGVGTISSAINMITTILCMRAPGMTMFRMPIFCWNIFVASVLVLMIFPLLTAAALGVLYDRKLGGHLFDPGNGGAIMWQHLFWFFGHPEVYVLALPFFGIVSEIVPVFARKPMFGYIGLVFATLSIGSLSMAVWAHHMFVTGAILLPFFSFMTFLISVPTGVKFFNWLGTMWKGHVSWETPMTWTMGFLVTFLFGGLTGIMLASPPLDFHISDTYFVVAHFHYTLFGTVVFASFAGVYFWFPKMTGRMLDERLGKIHFWITFVGFHGTFLVQHWLGNEGMPRRYADYLDSDGFTTLNQISTIFSFLLGMSVLPFIWNVIKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTSLPRIRSERPAFELHYPHMVERMRREAHVGHHVEPVTVKTK
complement(1855947..1856126)       hypothetical protein; CP316_08630                                                    N/A                 Corynebacteriumpseudotuberculosis316MLWGGKGELTLYSSFGLITAGGEVGELVGVMYKYVPTLLCGAYHWNYLENAVFLAELIV
complement(1856242..1857264)       PHAGE_Mycoba_Bongo_NC_041970: baseplate wedge subunit; CP316_08635; phage(gi100108)     0.0                 Corynebacteriumpseudotuberculosis316MGDESPSRKGETVESYDSYLESHKKPVSAINWNSIPDEKDLEVWDRLTGNFWLPEKVPVSNDLKSWGTLNDLEKTTTMRVFTGLTMLDTIQGTVGAVSMIPDAITPHEEAVYTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKIVLSYYEGADPLKRKVASTLLESFLFYSGFYLPMYWSSHAKLTNTADIIRLIIRDEAVHGYYIGYKYQQAVREQTPERQEELKEYTFDLLYDLYDNEIQYTEDLYDDLGWTEDVKRFLRYNANKALNNLGYEGLFPADECKVSPAILSALSPNADENHDFFSGSGSSYVIGKAENTTDDDWDF
1857674..1858159                   ferritin; CP316_08640                                                                N/A                 Corynebacteriumpseudotuberculosis316MSINEKLAAALNNQITAELEASMVYLQLSYILDDLSLTGMRNWMQAQHKEELDHAAQFSKHLLDRDYRPQIGDIAPPKLDANSAVEAFEASLAHEQKVTAMIRELAEIADSVKDYDSRPLIDRFLEEQIEEEANVKEILDRLRIADTGSGILRIDAELAER
complement(1858232..1860391)       PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; CP316_08645; phage(gi158079505)     0.0                 Corynebacteriumpseudotuberculosis316MSQSLGKHVAEPVSRTEQLDYHALNALLNLYNADGKIQFDKDREAANQFFLQHVNQNTVFFHDLEEKIEYLVENNYYEPGIIEKYEFAFIKDLFKQAYAHKFRFKSFLGAYKYYTSYTLKTFDGRRYLERFEDRVCMVALTLADGDQNLARNLVDEIMTGRFQPATPTFLNSGKAQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNLREAGAPIKKIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILNFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGKAFADISVSEHYAEMVEDPRIRKSKINAREFFQTIAEIQFESGYPYIMFEDTVNKANPIEGRVNMSNLCSEILQVNTPSLFNDDLTYEEVGEDISCNLGSLNIAMTMDSPDFAKTIETAIRGLTAVSEQTAINSVPSIRKGNDAAHAIGLGQMNLHGYLGREHIYYGSEEGLDFTNAYFAAVLYQCLVASNKLARERGRTFVGFETSKYATGEYFDGFDPADFAPKTEKVAKIFADSSIYTPTAADWADLKDSVAAHGLYNRYLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVYYPAPHMDNENLDYFADAYEIGFEKVIDTYAVATKYVDQGLSLTLFFKDSATTRDINRAQIYAWRKGIKTLYYIRLRQVALMGTEVEGCVSCML
complement(1860542..1860979)       PHAGE_Bacill_Mgbh1_NC_041879: ribonucleotide reductase A subunit; CP316_08650; phage(gi100062)     1.70e-18            Corynebacteriumpseudotuberculosis316MLVVYFSSATENTKRFVQKLGFPAKRIPLHKSSPELVVDEPYVLVCPTYGGGASISGGNTRPVPAQVIRFLNNEHNRSLLRAVIAGGNSNFGLDFGKAGDTIAAKCKVPYVYRFELLGTDEDVRLVRDGLLGNAAVLGLLPEPVA
complement(1861105..1861338)       PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; CP316_08655; phage(gi589892251)     4.98e-25            Corynebacteriumpseudotuberculosis316MSITVYTKPACVQCNATKKALDRAGLDYTLVDISIDDEARDYVMALGYLQAPVVEVNGEHWSGFRPERISSLVAQVA
complement(1861820..1861942)       50S ribosomal protein L36; CP316_08660                                               N/A                 Corynebacteriumpseudotuberculosis316MKVRKSLRSLKNKPGAQVVRRRGKVYVINKKDPRFKARQG
1862177..1863007                   PHAGE_Bacill_G_NC_023719: gp283; CP316_08665; phage(gi593777739)                     9.22e-103           Corynebacteriumpseudotuberculosis316MDTLRDTIKNRLRTRSAIDPAEEITARVDFLAQYLSASGARGFALGISGGQDSTLAGRLAQLAVEKLRKEGYPAEFWAIRLPYGVQADEEDARTALAFIQPDHSVTINIKPATDACAADVAQALGLETLNDFNKGNVKARQRMIAQYALAGEKGLLVIGTDHAAENVTGFFTKFGDGAADILPLAGLSKRQGAQLLQALNAPDSTWLKVPTADLEEERPALPDEVALGVTYSDIDTYIEGSGEVSEKAATRIEHLWKIGEHKRHLPVEPGDTWWRR

#### region 3 ####
2359660..2360607                   PHAGE_Bacill_G_NC_023719: gp344; CP316_10810; phage(gi593777800)                     9.08e-66            Corynebacteriumpseudotuberculosis316MSEAPNATTVHDVAIIGSGPAGYTAALYAARAELKPIVFEGIEFGGSLMTTTEVENFPGFPEGIMGPDLMDNMRSQAERFGADLRMELVTKVELEGEIKKIWVDDQEFHARSVILATGSAPRYIGAEGEQTLLGRGVSACATCDGFFFRDHDIAVIGGGDSAMEEATFLTKFAKSVTIVHRREEFRASAIMLERAKNNDKIKFLTNKTVSKVLGENTVSGLELTDTATGETSILDVTAMFVAIGHDPRSDLFRGVVDTNDAGYVRVEEPSTRTNVPGVFAVGDLVDAHYQQAITAAGSGCRGAIDAENYLAALDA
2360668..2360991                   PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; CP316_10815; phage(gi100156)     1.74e-16            Corynebacteriumpseudotuberculosis316MNAPIALTEATFKTTVIDSDKPVLVDFWAEWCGPCKKLGPIIDEIAAEMGDEVVVGKVDVDAERNLGAMFQIMSIPTVLIFKDGQKVAEFVGVRPKSEIVAKLRSHQ
2361080..2362261                   PHAGE_Bacill_AR9_NC_031039: hypothetical protein; CP316_10820; phage(gi100271)       8.91e-09            Corynebacteriumpseudotuberculosis316MSDILRVGDHSPRVAEVRTALTRLGLVPDSDKEIKQSKGQTFTDPETYFDEDLAEVIKGMQQARGIIASGEINEVTLRALREASYKLGARVLSFEPNNIFVGDDVVQLQTQLQELGFYTDRVDGRFGENTYKALLSYQVNYGLKSDGVCGPETIRAFGRLGRRITGGSPQALRERERVRDAGPMLAGKRVVIDPSLGGNSRGQVVQGPYGEITEEEILWDLATRVEGRMIAAGMETIISRPRQDNPSHLERADIANAFDADVMICLQCDQYQNDKANGVATFYFGSEAGTSSLTGEMLSGFIQREISARTDLVNCGNHGRTWDLLRITAMPTIEVVLGYLTNPHDVTILTDPKHRDAIAEAIVVAVKRLYLLDDDDQPTGTYKFAEMLEQGML
complement(2362313..2362912)       hypothetical protein; CP316_10825                                                    N/A                 Corynebacteriumpseudotuberculosis316MFWELEESAALRASAAGTPTLEKEAWLAAMLSAYGTCGFNITSADNFASGNPRAYATLLYCPASEAPGCARLPTAPLTSDAYVLTSLHCDPNMVGSGLETMLLDAAIVHLARQGIKALEAFARDESFCDDPFHPQPENIQRIVNSAEEIGLMTVELLESAGFEIIRHHPVLPLLRLHLPPEHALLTVEAIEPLLANVTA
complement(2363022..2364074)       PHAGE_Agroba_7_7_1_NC_019519: hypothetical protein; CP316_10830; phage(gi435844368)     3.84e-13            Corynebacteriumpseudotuberculosis316MAQETRKGGLGRGIGALITGSPAPGQRIGASAADVVFGGAAEKKRQSHSPRDAKGARISPIIAQAVEKQSAGSRGADQQLEEFGATYREIPIGLIIPNEKNPRSVFDEEDLAELVHSIREFGLLQPIVVREAADDRYEIIMGERRWRASSKAGLKTIPAIVRKTDDSEMLRDALLENIHRVQLNPLEEAAAYQQLLQEFGVTQNELADKLGRSRPVITNMIRLLALPVAVQRKVAAGVLSAGHARALLGVKGGEAPQVALADRIVAEGLSVRATEEAVTLMNRGEKPAPKKREKAPTPEFLTNAANRLADGLDTKVSVSMGKRKGKIVVEFGGREDFDRIMGLLGGNSEG
complement(2364080..2365072)       PHAGE_Natria_PhiCh1_NC_004084: putative plasmid partitioning protein Soj; CP316_10835; phage(gi22091150)     4.58e-27            Corynebacteriumpseudotuberculosis316MDDQNWEDTPIAAAARRAAQVLTPNSLHLPRPDSSRRLTVANQKGGVGKTTSSVNLAAGLAINGLKVLVIDLDPQGNASTALGVDHRAGTLSSYELLIGECAVEDALQETTASENLFCIPATIDLAGAEIELVNLVRREYRLSDALNTEYMQQAGFDYIFIDCPPSLGLLTINAMTAVDEVLIPIQCEYYALEGVGQLLNNITMIRQYLNPNLHISSILLTMYDGRTKLAEQVMDEVRGHFGDVVLGTKIPRSVKVSEAPGYGQTVLAYDPGSRGALAYLDAARELATRGDYVPSESSGPIGMSPEALREQQEQNQSDGEADHADETSKE
complement(2365177..2365848)       16S rRNA (guanine(527)-N(7))-methyltransferase RsmG; CP316_10840                     N/A                 Corynebacteriumpseudotuberculosis316MKHEENNGTEHGLELTPPPKIAAEIFGSLLDKAVEYHRLLATDGSTRGFIGPREIPKLWDRHILNCAVIGEAMDSNARVADIGSGAGLPGIPLALARPDLEISLIEPLLKRSVFLGEVKDSLGLDNVTIMRGRAEEKVIRNELGLVDVVTSRAVAPLGKLAGWSLPLVRLGGKMIAMKGSSVKEELARDEKMIFKAGGGKIKIFTVGDQLEDPTTLISIRKVR
complement(2366033..2366989)       membrane protein insertase YidC; CP316_10845                                         N/A                 Corynebacteriumpseudotuberculosis316MLNFIYWPISAILWFWHKVVSFVFDPGSGISWVLAIMLLTFTIRAFLVKPMLNQMRSARKMQELQPLMQEIRKKYGKDQQKMMAETRKVQKEVGVNPIAGCLPALVQMPVFIGLFHVLRSFNRTGTGHSQLGLSVEVNRETPNYIFSAEDVQSFLDARIFGVPLSSYISMPADMYKAFQPVDFTRVNIIAVAAPLILIIVVATHMNGRLSVNRQKARRESGLQAAPTSGQMQMQMDLMNKMMLWFMPLTILFTGVLWHLGLLFYMVANNIWTFFQQRWIFNKIDAEEAEEIEAKKAAKRATAPKPGQRPQNPKKGKKK
complement(2367045..2367332)       PHAGE_Haemop_HP1_NC_001697: hypothetical protein; CP316_10850; phage(gi9628603)      1.12e-07            Corynebacteriumpseudotuberculosis316MCYSHDQMSNENNNSRLVRPAGIISGLLYDAVRFYQKYISPLKMGSTCRFDPTCSAYALEAVSRRGAVIGTALTIARLAKCGPWHPGGYDPVPRR
