gi|00000000|ref|CP003091.1|  Burkholderia sp. YI23 plasmid byi_2p, complete sequence. 356263, gc%: 58.73%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
3157..3168                         attL                                                                                 N/A                 GAAAAGGTTCAC
complement(12593..14179)           PHAGE_Stx2_c_1717_NC_011357: transposase; BYI23_E000130; phage(gi209447153)          2.00e-170           BurkholderiaspYI23MPDHAPLPDTIAELHALVLEQQASMAKMRQEIAERDREIVERDQEVERLKAQIDKRRRMHFGRKSEQLDRQIDRLETQLEDLSAGSGVADVRRARARASSSGVSAASPKEALAPHLPREEHELEPDSICPKCNNAMELLGEDVSEQLARVTAMFKVIRTIRRKRICTGCGHIAQPPMPGLPIERSIAHPSLLAEIIVAEYANHTPLYRQSEIAARDGVRLDRATMARWVGQCEELCRLLTEALRRYTMATAKIHADDTPIPVLAPGNKKTKTGRLWVYVRDNRRSGSNEPASVWFAYSPDRKGIHPQTHLAGFKGILQADGYAGFNELNEGGKVRLAFCWDHARRYVFNAHETAPSDTTKQWLDMIGEFYGIEADIRGKTPDERRRVRQEKSAPLLVALETSMREKLATLWPKASLVEAINYSLNRWDGLTLFCDDGRVEVSNVLAENALRCVALGRRNFMFAGSDSGGERAAAMYSLIGSCKLNGVNPRAYLEYVLTHIADHQANRIDELLPWNVAKHLLPSAPSSG
complement(14210..14554)           PHAGE_Stx2_c_1717_NC_011357: transposase; BYI23_E000140; phage(gi209447152)          2.86e-48            BurkholderiaspYI23MIGLPPGTRIWIAAGVTDMRSGFPALAAKVQSALEENPLGGDVFIFRGRRGDLVKILWATDDGLWLLAKRLSHGRFIWPQADGGKIFLTSAQLSMLLEGIDWRQPRRTAALSML
complement(14551..14949)           PHAGE_Stx2_c_1717_NC_011357: truncated transposase; BYI23_E000150; phage(gi209447151)     1.23e-22            BurkholderiaspYI23MDRKCEAPGKRPNFAREFKRQLVEQTFEPGASVSLVARRNDINTNLLFRWRRQYLQGAFGAPRPFGPARQEPDGDVASLLPVSIAPEAEASMPVREAVSEDACEIEFDRARLRIRGNVSPDMLRLLIRELSR
15623..17326                       PHAGE_Brevib_Jenst_NC_028805: putative recombinase XerD; BYI23_E000160; phage(gi971744895)     6.10e-06            BurkholderiaspYI23MKTSYTLTLRSNDASAEGFPRADELAALRAWYAGLSTREAVQRYLPLALGARKSARGVLGQIRRRLLAIAGAAQRDDLIQLLAHPAQKREQYAKAVGLAIEALRTARPPEPAIADDVALWFSPRAARVLHAQGITTLADLTVRIPRRRQWWKGVPGLGAASARAIEAFFAARPALTDKARTLIAASQRDDIVPWEAIRLPHEVDGSEGKFRAPRATCTLDASNDYAAVQTWLTMHESPSTQRTYRKEAERLILWAIVERGRALSSLTTEDAIAYRTFLRHPTPRDRWIGPVRPRSSPDWRPFNGNLSARSVAHALSIIGALFRWLVEQRYVLANPFAGIKVRGSNPTALDASHAFTDGEWALVRAIADGLEWSNGWAIPAAQRLRFLLDFGYATGLRASELVGATLGGVETDARGDHWLRVNGKGKKLARVALPPLAWDALARYLAERGLPVVPVHWQPKTPIIGSLDTDRGTAISSVRLWMIMRRFFLLSADSIEADHAPLADKLRRASPHWMRHTHATHALGSGAELTAVRDNLRHASVSTTSIYLHSDEVKRARQMANAFTTPK
complement(17576..17953)           hypothetical protein; BYI23_E000170                                                  N/A                 BurkholderiaspYI23MGLLNDKQVEFIEAIIFHADFVDTVSLIVAVIFVIVARKRRKQHRSATYAGFWSMTTGTDFVTGGGLFPLLALAASFFSERLLANLVHHDHIVLPLAGISSFFAIVHVALQETGPVKAGVPESAG
18495..19613                       PHAGE_Klebsi_phiKO2_NC_005857: plasmid partition protein SopA; BYI23_E000180; phage(gi46402111)     1.84e-08            BurkholderiaspYI23MTVTELEVDAYTDFASLSFPPQFAADALRISPQTLKIIERDNQLKISRVSRGSVEVRSYSLADIFQIARIRRENKSTKAFSRPITVANFVPKGGTGKTTTTCDFAIQFAYLGLKVLVIDNDQQADASTMLGYDPDLTAEELIEMGVPADRGISGHIGNLMRIGNFYQPMTLDEVIKKPFGELGPHLIPAEDSLDDMDAALRSANGSDFRYSLFFEQARAGEIPHCDLSGYDVIIIDNAPAGSLLSRNSMVAADFLICPIRMDKFSYRALSRLAYKLNEFAKDFKRAPEIVAIPTMYVKNRPRIERNLSQLVSLFPGKVTENRLFYSEDYSKSLDEGIPLSMWRPGTDNSLGAMRDVFDEFVARIRAVTEGTK
19610..20764                       PHAGE_Gordon_Nyceirae_NC_031004: late promoter transcription; BYI23_E000190; phage(gi100046)     6.59e-07            BurkholderiaspYI23MKQSRRLGHDPQPASNGEDQPKHIQGVRVAELPPTNIDLPMSEILREKGIAVAGAAESVAPAPTMPSPAPNGSAVSRSEASNSVAPLAAPSPPTRPQAKTAVSPAAPHDGVTKLLNPALLLALDMIDPSPYQPRIIFDEDALASLADTISDSGLNNPIIVRLKSDGRYELIAGERRLLAHKLLRLPTIAAFVRELSDADAAIMATTDNDAREDLADFERGRSYKRLLDDKVVENQRELARRVGRSMATVSRCLAYFKLPQEVIGMLTSNPLLVGTKVVAELVSFAEQGYRPQVVEAVAKIEKTKLSQESALNWLKTEVRRMKNPSVAPAPRNLHVGGKSVAEVKVDGRKLILQCPKDVNPENLLTAIEKMLGTADLADLTPKAD
32300..32311                       attR                                                                                 N/A                 GAAAAGGTTCAC

#### region 2 ####
217548..217559                     attL                                                                                 N/A                 CCAGCGCGGCGA
217679..218479                     PROPHAGE_Brucel_1330: transposase, putative; BYI23_E002520; phage(gi23502708)        5.10e-55            BurkholderiaspYI23MSMLGGDWTDGTMTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA
complement(218847..219551)         PHAGE_Salmon_SEN5_NC_028701: DNA methylase; BYI23_E002530; phage(gi966201553)        7.31e-74            BurkholderiaspYI23MTGYLGSKQVSGAYQAVIANMPPHDTYIETHLGSGIVLRRKPPAARSIGLEIDPATFECFGSIAAEESSAFDGAAVETYNVDCLAFLRDFDFSAAGRVLIYADPPYVLATRSHPGTRYRYDYTDADHRELLAVLDALPASVMISGYPSSLYSELLPAPRWRVLSYQAMTRGGPRTECLWMNYAPDAAHWATHAGVDFTDRQRIKRKAARWKRMFSELPAGERIAILAALLEVDS
complement(219700..220776)         hypothetical protein; BYI23_E002540                                                  N/A                 BurkholderiaspYI23MALEPIRVLEFADADRADVQRRVVDAVQAAPERFLTDYAARPGTFGGRYVCADAMKELLPEYTASREARGRYNAPVHNAAAVLAAEQYRRVVADSSDPARNLVLFVTGMPGAGKTSEIQYAALHEGNRLGRDVRAIFEGQLVDPQASIAKVEQALSAGCRVGVIAVLPRPEEALAHTFQRFEELGRGASAAVMVRIQEGTPDGLEALLGRFGDQISVAVHDVRDRANVHRLEGMDGVNIWRKELENGPVQERLEREFDRLNQLGRVSADCALQFKGQSPHGQLYAIGGPDVGGSLAHGDGRKATPESGRTSLLNAARGSSLAGLSDALKTGQSEGDGKTKSNEIGHGLPKPPSPRRSR
complement(221539..222243)         putative zinc metalloproteinase; BYI23_E002550                                       N/A                 BurkholderiaspYI23MTNPTAQAYAELQLAFDHYNRELFAGELPPCLITMQREKRSYGYFSSERFVHHHDKSKTDEIAINPAYFAVVPLLEVLQTVAHEMVHAWQFHFGNPSRSGYHNREWADKMEAIGLMPSSTGQPGGARTGQKMADYAIPGGPFMLATDALLTQNFRISWVDRFPAIMPTPAIDAGAGAGAAGGHLADVLQPATGNRSNRIKYRCPTCGVQAWGKPALRLLCGGDDCASAPLAPVE
complement(222598..222996)         PHAGE_Caulob_phiCbK_NC_019405: hypothetical protein; BYI23_E002560; phage(gi414088043)     7.53e-07            BurkholderiaspYI23MQEVRLFRLVKPLPPCNQCGKPTANLKSRVCEECKKERAARAVTTDRQLFTAVRALPHMAITKKEGEYRVTFRLASIVEADQGRHDADWHRDHAERVAYYTDDRDDALGSAKSLSDNMVRVMARLAEQGASQ
223150..223941                     PHAGE_Burkho_KS14_NC_015273: gp8; BYI23_E002570; phage(gi327198277)                  7.13e-19            BurkholderiaspYI23MTALIVMACSSTKRPGEEVMPAIDRYDGPMWRTLRAALAELGEDCRPEIWFLSARYGFHPADMPIADYEQRMTPSRAAELLRLPSSNHAAFAEAARGADRILLAGGAIYRDAMRRAIGQHPSIAETDGGGIGIHRQQLRRWLAVDRDTTGAAPVQSLDAFARERGLVTMAEARGHIHAGLRSAPTTKTFRRWYESETRRLLIEAGRTASLYQAAIDAGTIIAPPRATLEEIANGHPDLESTHAARRVLEKRRARRELAEREAA
223956..224351                     hypothetical protein; BYI23_E002580                                                  N/A                 BurkholderiaspYI23MGHNGGPALDDTPPAPPRLPYDAACVRCIHWTPPSEREESDYRYWAMTGRGRRVKEPSGHCFRVMHRPGGPLSFSGTMGRSSCYNYEAKPPPAYRPSGQGFVTIWGPGDKILWQGREGEEPAEFRQGELDL
224375..224719                     PHAGE_Pseudo_VCM_NC_029065: hypothetical protein; BYI23_E002590; phage(gi985769501)     3.34e-11            BurkholderiaspYI23MKVETRQTIERQIARKAAEGLIAGGYAVSVYDGEEIALEASTDVKAIMAAMFATDEDYLFAMKPDEAGKMERQGYARFIYGNEGWDVMSDYTTNLESELAGAKAEADKLETRHG
224797..225897                     muramidase TrbN; BYI23_E002600                                                       N/A                 BurkholderiaspYI23MWRDEGPHGNAGRGRAGLRRLASPHGHYGRLARRAARPRPRVQNTNNTADLGSMQLNSSYIQSLARYGIRPEYVLAAGCYPYNLAAWRIRNHIRDDKGDLWTRVANYHSRTPVHNARYRALIMAKGARWEAWLSSRYNTYSVNGIPVSGGAPAARSASIPLTITAADATGGGQLAAQPAIVQPQGSADASAGYVASILAAAFNARITDTWRALEANYGAANSFHKYGQAVDFVPRAGLHTITREQIRAVMAQHGVRVAELLGPGDRGHADHWHLAFYTGDQTRPLDRAQIVVARAERGVGGLTSAAVQPMASYEAAPAPQARVMAARPNAAPISVAVNFRRDMLHPSPTDPTADPRFIPRTITASN
complement(225918..226217)         hypothetical protein; BYI23_E002610                                                  N/A                 BurkholderiaspYI23MLDPNPSVADLDALLDRHRNDDAAMEKIVRGYLRCAIYSYQKHCVWRALRHIGKDDWSFKEEDVAALRAEGAKSISDFRDWLIEELAGMGISAHTGLPN
complement(226210..226452)         hypothetical protein; BYI23_E002620                                                  N/A                 BurkholderiaspYI23MCDDFAQARLDMFEAGLFGQGPAFWRWIETDAAQPYLAAFAADRRPPEPGEPFAIDLAADDLLAPDRLAQLALQIEADHA
complement(226452..226778)         PHAGE_Escher_172_1_NC_028903: helix-turn-helix motif protein; BYI23_E002630; phage(gi971754318)     4.69e-06            BurkholderiaspYI23MSAQDEIIEEGSGNVFADLGFADPDTHLLKAQLVTRVAEAMQERKLTQIAAAKVTGSTQPELSRILRGQFRSVSVERLLAMLTRLGCKVDIVVRPQGRTTESAVIHFA
complement(226775..227149)         PHAGE_Entero_N15_NC_001901: gp49; BYI23_E002640; phage(gi9630516)                    1.70e-05            BurkholderiaspYI23MDTERPVRWVASSKRDFREFPDDVQDVMGYALHLAQQGGQHASTKPLKGFGGAGVVEIIDDHQGDTFRTVYTVKFAEAVYVLHAFQKKSKQGKATPQADMDLIRTRLKSAEEHHRQHQTPRGTA
227571..227927                     hypothetical protein; BYI23_E002650                                                  N/A                 BurkholderiaspYI23MVDSSNIYREQQKAVALEFMEKALAILVEVDDSAADCYLQQSIDTCMASPRMTFPEDEFWDCVDELPHLTDRVLFLHRQNGLSIEQIAKRLGIEQKEAAERLSVGLALVRGSFSLMEH
complement(227924..228313)         response regulator receiver domain-containing protein; BYI23_E002660                 N/A                 BurkholderiaspYI23MGLGSGSAAVLVVEDEPLVRTMAADILMDAGYRVFEACEAADALAILDGRDDIGAVFTDIEMPGGMTGLALAAAVRDRWPSMPVLVTSGRVRPGAGELPNGAAYIAKPYMPGELVATLGKMLPHPDSGD
complement(228304..228588)         hypothetical protein; BYI23_E002670                                                  N/A                 BurkholderiaspYI23MSEGTPDEDVFPGAKLSDPAMVRAMGGALAVLAGLLEGKGVSTVEETSNVLGIYAVITGETAPDEGLILACWAGMLRDAAQEKAEKDGEPGKWD
complement(228585..229688)         PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; BYI23_E002680; phage(gi100150)     4.29e-19            BurkholderiaspYI23MEWLGFRGARGGRSADGKAAFANGAGNVFQQARRHLLDEIAAFLLTYELDVTPNNLLTAHGAFSGSNPALARKIAQHVTAGLAVTQEWLDEITAADETIDKHDGIQHLMARLETTLESFSKNANATRSATADYTDELEQHVAELDQVQGTGQILSSLADLAKAMLERTRKLETDMRRSEEEAKALRRSLEQARREAEIDHMTGLPNRRAFETVLEREYRDARASFDPLTVAFCDIDHFKRINDTHGHDAGDRVIRLIAEMLATISDDNCHVARHGGEEFVMLFRGVSLSEAHKKLDGLREQMAERRLRNRKTDEPLGQITFSAGIADVFDFPDPRAALKAADEALYAAKQGGRNQVIIAPKGGAQAA
229999..231123                     PROPHAGE_Shewan_MR-1: IS110 family transposase; BYI23_E002690; phage(gi24375433)     2.11e-20            BurkholderiaspYI23MDRAEADPSAARFWVGLDVGYKNTAVCVLDCDGAIVHQVSMKSSATEIGRYLRKNFKSHVTLIGIESGGLTPHLTTKLRAQGFQVVVLDARQVHRVLSVKRNKTDTNDARGIAEITRTGREYLTEVYVKSNLCFEIRAYLTMRDRLVKQRRETEAMIRGLVRVYGGRIEGGTETAASYRSRAIDQMCLIADTEGVDLRPRVLPLLDLCEGFYVEANRIERELELLAASNPVCRRFMEIPGVGTITAVSFYSAIEDPTRFRHVDDVAAYLGLTPRVYQSGESLTHGGISKMGNQLTRTHLVGAATVMLSNTRSFSTLKDWGLKLSKRIGFNKAKVALARKLAIIMFSLWRDGTHFMAKAADVPAHRALMQSRLPA
238103..238114                     attR                                                                                 N/A                 CCAGCGCGGCGA
