gi|00000000|ref|CP003094.1|  Lactobacillus rhamnosus ATCC 8530, complete genome. 2960339, gc%: 46.76%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1329149..1330345                   PHAGE_Bacill_G_NC_023719: gp522; LRHK_1389; phage(gi593777977)                       8.12e-44            LactobacillusrhamnosusATCC8530MQLDLNQPDFKAAIPILKKIEAAGYKAYFVGGSVRDALLGLPIHDVDIASSAYPEEIKRIFKRTVDTGIEHGTVMVLDHGTGYEVTTFRTESAYQDFRRPDHVTFVRSLAEDLKRRDFTINALAVRHDGTIIDLFDGLTDLKNRQLRAVGDPHERFHEDALRMMRAVRFESQLGFHIEATTKAAIAANAPLLKHISVERIAAEFNRLLVGIDRRAGMQDFLDTHLFAYAPKLAPHQAALQQFSELPNQAFTSIASGWTALIFMLKVAPESFLPAWKQSNDLMGLVDQAVTLLRKMPTPTAWDLYSAGSAAVAVVSEVAALMDHQFVPASLTTAYEALPIHSKKTLALTGRDLIQAGVRPGPAMGKILHQIEYRVVDGSLPNDSKKLLAAAIEMSREPS
1330471..1330926                   PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; LRHK_1390; phage(gi981220948)     8.72e-05            LactobacillusrhamnosusATCC8530MAEHVFEQLVFHFRNGDEWTVQHDELADVWISRVTTSYGRIHGGQIQEIHPCKSFKVEILPEADHVKSSDINTGSLEMGMFGRATKYQDIEKMDLVFDDQTKKQVQIYFPFKQKDPSGLDNEYQTSKLAKNGHLYIVIDAQHTVDDEYPRI
1331075..1332988                   PHAGE_Bacill_G_NC_023719: gp245; LRHK_1391; phage(gi593777701)                       6.91e-12            LactobacillusrhamnosusATCC8530MQTLTAQGLSKAYGDKQLFNQIDFLINEGERIGLIGVNGTGKTTLIRSLAGMESVDAGTIKTPKQYRISYLAQIPELDPDLPIMDAIYLGDSPVFQAIRQYERALAAYTKDPLNQAKTDAYTKADAKMTQEDAWSAETDIKTILTQLHIGDLTARVGSLSGGQQKRVGLAQVLIESPDLLLLDEPTNHLDFDSIAWLENYLSHYRGALVVVTHDRYFLDRVTNRIFELDRGRLFQYQGNYQAYVAKKAEQLEAEKSAGHKQAQLYRQELAWMHAGAQARSTKQQARINRFKALQKAKDEAPAPDQQLDPIQIASTRLGKKVIEIHDASLRFDQQVILNHFDWLVQPNTRIGITGQNGAGKSTLLNIIAGKQALDSGTIELGETVRLGYYTQLNTNLDPKKRIITYLQEVGEEVVQADGQRVSVTQMLEQFLFPRSMHGTLIGRLSGGEKRRLYLLQVLMRQPNVLLLDEPTNDLDIATLTVLEDYLDHFPGTVITVSHDRYFLDKVADQLLIFDGNGRIERAVGEFSDYLAKQKPQSAASKTNSAAAKPKAPAKKAAPKQKSKLTYAEQIEYDKLQQELDELDEQLAKVKAEMAQVNGEDYVKLGDLQAQLDAINKDIDQKFDRFAELDQYVSSSER
1333005..1333955                   PHAGE_Staphy_SPbeta_like_NC_029119: thymidylate synthase; LRHK_1392; phage(gi985761245)     5.23e-158           LactobacillusrhamnosusATCC8530MLEQPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYDPYPAIKAPVAV
1334072..1334563                   PHAGE_Bacill_BCD7_NC_019515: dihydrofolate reductase; LRHK_1393; phage(gi422936066)     1.66e-27            LactobacillusrhamnosusATCC8530MTAFLWAQDRDGLIGKDGHLPWHLPDDLHYFRAQTVGKIMVVGRRTYESFPKRPLPERTNVVLTHQEDYQAQGAVVVHDVAAVFAYAKQHPDQELVIAGGAQIFTAFKDDVDTLLVTRLAGSFEGDTKMIPLNWDDFTKVSSRTVEDTNPALTHTYEVWQKKA
complement(1334698..1335339)       channel, hemolysin III family protein; LRHK_1394                                     N/A                 LactobacillusrhamnosusATCC8530MRVSKSSHYEFNNEMFSAITHAFALGLAVTGTIALGIKGVNSGSQVELFSLLGFGVSLMLLYTASTAFHGFYFSKARHVLQVLDHSGVFILIAGSYLPYCLVAIGGKLGIGLLIAIWALCLGGIAYKLFFLNRFKHLETMIYVVLGWLCLVGMVPLWHHLGPVGFWLLVAGGVAYTGGAMLYLQKGIPYIHVIWHLFVILGSLCMYLSIYFYL
1335581..1336423                   PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; LRHK_1395; phage(gi985761237)     4.23e-24            LactobacillusrhamnosusATCC8530MANIKIVTDSSVQLTPEEISQHNITVVPLTIMIDNTVYIDGETITREDFMDEMAAAQNLPKTSQPAIGTFTDVFDKLTADGSQVLSIHMTETISGTVNSARQAAQLAKGDVTVIDSQFTDRSMAFQVLAAAEIAEAGKDMPTILDKLKQIRDHTILVLGVTNLDNLVKGGRLSRVSGLISSFLNIKVVLQMEHGELKALRKGRGMKTINNFVTETISKMAKLTDIQSIGVSTAGAKEIGEDIGRRLAEVLPNVPILVRPTDPVIATHTGPGAFAITYYTD
1336686..1337531                   GDSL-like Lipase/Acylhydrolase family protein; LRHK_1396                             N/A                 LactobacillusrhamnosusATCC8530MRTLKNFFISCGVLLLACLLAFGGWQLFGPVSSPSEVKVVANTPKHLQLTALGDSLTYGVGDATNNGGFVGLTKGELEATGQYQVTTKNYGVSGNTSGQILTRVNKQPKIRADLKRANIITVTAGGNDLMHVLQKHFLTLSEKQVTAGSVAFQKRLATLLTTIRKENPTAPIYVFGIYNPFYVYFPKMTAMTNSVKAWNQATQKTLQQFDRTYYVDIDSVLSNGETAANKASAKEALKEATSGDGNPLIFSQDHFHPNNAGYGQMTKQLMKQMKATKKAWE
1337536..1338177                   conserved hypothetical protein; LRHK_1397                                            N/A                 LactobacillusrhamnosusATCC8530MQAKKRSLQRNAAKQKAVRTGINWWKWLFLILVGLLLGTGIWFTKTALMPVKINSAPQTAMTSNDPVFTVKVTKNSANRIMAHYLKSYLKDSKIKYAVTLGTNEAALSGSFKFLGNAVKFQLTFDPLVLKNGDVLLKAKNLNIGALPVPISFVMSYIGNSYKIPKWVSLDSKAGTVVLKLSQFKLQNGMTLKANKLDLTNDDLEFAVYLPDEE
1338203..1338721                   PHAGE_Temper_phiNIH1.1_NC_003157: putative methionine sulfoxide reductase; LRHK_1398; phage(gi16271776)     5.63e-20            LactobacillusrhamnosusATCC8530MKKETAIFAGGCFWCMVEPFEEQPGILNVVSGYTGGHVANPTYEQVSSHTTGHTEAVEITFDADVIDYPSLLNIYWQQTDPTDAMGQFRDRGDNYRPVIFVKDEAQRQAAEASKAALEASGRFSDPIVTKIESAKPFYSAEPEHQQFYAKNPRRYAMEHAQRQAFIDKNWKD
1338724..1338966                   conserved hypothetical protein; LRHK_1399                                            N/A                 LactobacillusrhamnosusATCC8530MHRTFYEYLMTLRNPNDHSEVAEFAKNAFLDQSFPKHEKDYHRLSDYLELNGNYLPTMAIFDETYRDYEASESTGGDSYQ
1338935..1340377                   PROPHAGE_Escher_MG1655: carboxy-terminal protease for penicillin-binding protein 3; LRHK_1400; phage(gi16129784)     9.60e-30            LactobacillusrhamnosusATCC8530MKAQEAIHINKHKVPLWAVIVLFLVALGGGAAGGYALSYQQAQQSVLKTGVPKALAPVISAYETVTNNYYKQVSTTKLTDGAIKGMLSSLDDPYSVYLQNNDKTNLDDTISASFGGIGATIQQDHNNLSIASILPGTPAKKAGMKVGDVLLKVNGKDVSKETVTQAVAKIRGKIGTTVAVTVKRGSKQATFSMKRKKITVDTVTGKLAPANKQVGVITISTFSEPTVKQFKATVKKLRKEGAKSFILDLRQNPGGMMTAALSISSMFSKNGQTVMQIEDRNGAKEVYKAGKKLDGGFKVTEKTAVLIDGNSASASEITAAALHQNSQIPLVGEKSFGKGTVQNVGEMSSNKELKLTVAKWLTPDGTWINHKGLTPDVKVAYPAAAKITLINATQLKPGDKGSDVKSLQQMLKALKIGSATVNGQYDDATQAAVKSFQEANKLDASGTADQDTLAALAQKLSDQLTKDDPMVAAAIKEVTK

#### region 2 ####
complement(1728284..1729807)       PHAGE_Prochl_P_SSM2_NC_006883: 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase; LRHK_1781; phage(gi61806062)     2.60e-90            LactobacillusrhamnosusATCC8530MKRALLSVSDKTGLVPFAKGLVERGFELISTGGTHRALAEAGVAVTGVEAVTGFPEMLDGRVKTLHPKIHAGILARRDDPAHMQALADHDIQPIDVVCVNLYPFAATIQRAGVTRAEAIEQIDIGGPSALRAAAKNSDSVWAVVDPADYADVLAGLDQNDADLRQRLAAKVFSVTAAYDAQIAHYLDPEPFPEQFTPTYHKRQDLRYGENSHQQAAFYVEPNPDPTSLAAAKQLHGKELSYNNIKDADAALAMLREFKQPAAVAVKHMNPCGIGLGDTLEAAWDKAYAADPMSIFGGIIALNRRVDLATAEKMHKLFLEIIMAPAFDDDAYEILAKKKNVRLLTINTADTPEELGTETTSIYGGLLIQTRDDKAETPADMTVVTEVKPTEAQLKALAFAQTVVKHVKSNAIVVAQADQTLGIGAGQMNRIGSVELALTQAQQNDNFAGAVMASDAFFPMDDCVDYAAKHDIKAIIQPGGSIRDKDSIAKANEYGIAMVTTGVRHFRH
complement(1729808..1730377)       PHAGE_Burkho_phiE255_NC_009237: gp30, formyl transferase, putative; LRHK_1782; phage(gi134288807)     4.06e-06            LactobacillusrhamnosusATCC8530MKSLAVFASGNGTNFEALANAAQAVDSHYQIAVLVCDQMQAPVIQKAAARHIPTLVVNFKDYANKAAAETYILSQLPPVDALILAGYMRIIGPTLLNAFPKRIINLHPALLPSFPGRQGIKDAFDYGVKVTGVTVHYVDAGIDTGEIIAQDPVRVSPGMTLAQLEAAIHHQEHQTFPATVKQLIEEGAI
complement(1730374..1731384)       PHAGE_Synech_S_CAM8_NC_021530: phosphoribosylaminoimidazole synthetase; LRHK_1783; phage(gi514050953)     2.47e-78            LactobacillusrhamnosusATCC8530MTDYKDAGVDIEAGDAAVKRIATLAKETANDNVLASVGGFAAAYRLPSVPQPTLISATDGVGTKLLLALQCDAHETVGIDLVAMVANDLLASGAQPLFFLDYMAVDHLDVTRAEAVVRGIAYGCQQAEMALIGGETAEMPDMYPQNHYDLAGFAVGLVSEQNRLPKDVAAGDVLIGLPSSGVHSNGYSLVRKLLAETDLGSQTLEDGSEVMQALMRPTRIYVKQVLPLMQQGLIHAAAHITGGGITENLPRVIPAGLCAQVNPQAWHRPELFDRLQHAGHLSETTMRTTFNLGIGMILVVPEHAATTIQAALPSSKVIGHVVADPSAKIQWQVASK
complement(1731381..1732835)       PHAGE_Pseudo_tf_NC_017971: glutamine amidotransferase; LRHK_1784; phage(gi388604590)     8.30e-06            LactobacillusrhamnosusATCC8530MLSEPKGLNEECGVFGIWGNPNAASITHLGLHTLQHRGQEGAGIVGLTKDGMRRHYGLGLLSEVFTNTDQLTPLMGRAALGHVRYSTAGGRVLENIQPLLFRFSDEAIALAHNGNLTNAISLRRELESQGAIFQSTSDTEVLMHLIRRQVGQPWLVQLKKALNEVHGGFAFVLLTEHGLYAAVDPHGFRPMVVGVMPDGGYIVCSETAALDAVGADFVRDIQPGELITIDDDGLHLDHFTTNTSLAVCSMEYIYFARPDSDIHGINVHQARVRMGERLAREQPADADIVVGVPNSSLSAAIGYAKASGIPYEMGLVKSQYVARTFIQPTQALREKSVKMKLSVIKPVVAGKRIVLVDDSIVRGTTSKQIVKLLKEAGAAEVHLRIASPPLRFPCFYGIDFQTTSELFAANHSVPEMRDLLDVESLGFLSTQGLEESVGLPTTAPNGGLCVAYFTGKYPTALDDYAPALNKEVASLKVNVAEVSA
complement(1732811..1735027)       PHAGE_Microb_Min1_NC_009603: putative phosphoribosyl formylglycinamidine (FGAM) synthase II; LRHK_1785; phage(gi149882852)     5.99e-175           LactobacillusrhamnosusATCC8530MTHVEMSPEAIAEKKPYLALGLTEDEYHRFAELIGHQPNDTEIGLASGMWSEHCAYKYSKPILRQFWTKNDRVLMGPGEGAGVIDIGEGKAVVFKAESHNHPSAVEPYEGAATGVGGIIRDIFSIGAKPVAMLDSLAFGDLNLPHTQHLVDRIVAGIGGYGNAIGIPTVGGETNFDHTYSRNPLVNAMCVGIMDKDQIQKGKAAGVGNALIYVGAKTGRDGINGASFASGDFSDEEAADRSAVQVGDPFMEKLLMDACLEITQDHQQALVGIQDMGAAGLVSSSVEMAGKANSGMEMDLDLIPQREANMTPFEIMLSESQERMLLCVRAGFEQEVLDVFAAYDLDAAVVGHVIEGHQYRLYHHGKLVCDVPVSSLTDDAPIYEQVGKMPARLAEPAPDFDPIVTDPVATWKAMMGTPTIADKSSLYRRYDAQVQTNTVVLPGSDAAVIRIRGTHRALAMTTDSKGRYLYLDPKVGAAMSVAEAARNLAASGAEPLGITDCLNFGDPTKPEAFYELAEAAKGIIAATKAFNAPVISGNVSLYNETNGKAIYPTPMIGMVGLIEDLSTITTANFKHADDLLYLVGETHGDFNGSELQKLQTGEVAGRLFDFDLDAEKANQQFVLTAIRQHLVTAAHDLSDGGLLVALAEMGFTNQLGAQVKVDLPTSWGFSETQGRFLVTVAPEDQAAFEALNGPAELIGRVQAAPQFDVTTVSHQFSVPLEELQTAFEEALPCYLNQKA
complement(1735014..1735700)       phosphoribosylformylglycinamidine synthase I; LRHK_1786                              N/A                 LactobacillusrhamnosusATCC8530MKAAVISFPGSNCDLDLQWAVQTIAGAECELIKPSQTDLSRYDVVMVPGGFSYGDYLRSGAIARFSPVMTALKAFAEAGGYVLGICNGFQILTEAGLLPGALQWNRDLNFICEPVTLLVDRADTAFSNQYQVGEQLTLPIAHGEGNYYADPKTLAALEANGQVVFRYADNPNGSLHDIAGVTNEAGNVLGMMPHPERAVEALLGGTDGLGVFKSLMQQTKGVHVRDAR
complement(1735697..1735957)       PHAGE_Synech_S_CAM4_NC_031900: DNA helicase; LRHK_1787; phage(gi100021)              4.98e-07            LactobacillusrhamnosusATCC8530MFKAKVYVTYKPSVLDPKAEVIKTALTRMDYHNVDDVLYGKYFELKLTGTKEAVEKQVDTICDQLLANVNMETYRFELEPITEDEA
complement(1735950..1736678)       PHAGE_Synech_S_CAM8_NC_021530: phosphoribosylaminoimidazole-succinocarboxamide synthase; LRHK_1788; phage(gi514050949)     1.54e-49            LactobacillusrhamnosusATCC8530MVKKTTLLYTGKAKQVFATDDPDVLWMTYTNQATALNGEKKAQIAHKGELNRAISTLLFKELTAAGIPTHYIDSPDATTMIVKKATMLPLEVVVRNYASGHFVTKFNVKPMMKLDPPIHEYYYKSDELGDPFMNEAQIFALHEATPEQLKQVRALTDRVNAYLTKRFDEVGITLVDFKLEYGTLTDGTLVLADELSPDNFRLVDQKTGDSLDKDVFRQARGPLTPVYEEVLARLQEKGAAHV
