gi|488448414|ref|CP003261.1|  Clostridium pasteurianum BC1, complete genome. [asmbl_id: NC_000000].4990707, gc%: 30.58%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
317489..317503                     attL                                                                                 N/A                 TTAGGCATCTTTAAA
complement(325485..327143)         PHAGE_Clostr_vB_CpeS_CP51: putative resolvase; Clopa_0310; phage(gi509140068)        7e-142              MIAAIYSRKSKFTGKGESIENQIQLCKEYAASQLRDNDITEFLIYEDEGFSGGNTNRPEFQKLMDDARLKKFDVLICYRLDRISRNVSDFSSTLEILQKHDIDFISIREQFDTSTPMGRAMIYIASVFAQLERETIAERIRDNMLELSKTGRWLGGTAPIGYNADPITYFDADMNERKMVKLKQVPKELNTVKLLYKKYLELKSLSKVETYALQNSIKTKRGSDFTKNNIRIILTNPVYVKATENVFDYLENEGITTCGDPDGEHGLLTYNKQKSVSNDNGKTVRVFRDKSEWIAAISSQKGVIEADDWLEVQKILSENKDSFPNEGKTHNALLTGKIRCAKCGSNMQIAHGHISKKTGKQIYYYACSMKKHSKGVRCNNKNAKVSELDPVVIKQLKELAYNKESIINKLEMKNKKARELNKSSNREEILNNSIADKNKQIQNLMNKLAVADDISDLLIEKIRSLKNEIKELKVQLDNLNKLNSEFTDTELNLSFIKLMLNRCSMIDSLPNEEIKQLIDVLIDKITWDGESYGVTIDFIGSNPEEDEESKKK
complement(327247..328002)         hypothetical protein; Clopa_0311                                                     N/A                 MQYYKNPNLKIIWSIIVLSPFIVAALVSINIVDIPTSNDWIGFYASIIGSLLGGLLTFYSVYLSMDGVKGQIIQQKEANNLLKIQLDNDIKKYKEEQRLSIRPYISEHSEQTDNAINYYAHIFEVDYFNFTYTDEMKIKIKNIGIGPLISLSVIGIRKAYMDDELIEPIHREVKSLEVGGIMNLNISYMTESEYLSAKLDVEIQYYDILDNQYKQVIRVSLFRDESGSYQKCMIESISKQELINNESLAGS
complement(328090..329583)         PHAGE_Strept_EJ_1: hypothetical protein EJ-1p03; Clopa_0312; phage(gi39653677)       9e-53               MFKNLRELFSLKKTIEQKKLEIMEKDNYINKVNSQISEIDKLLNDKENLKNSILTEAMEFASKKSHEVIQNISTDIHEIVKQKALKQNELLETETQFEKTTKSLNTSLKKLSKSKTLYSTFNNAIDRFFNAELGDSYKIPKLKLDEAEQLSPTVTLKLHSMDVRELKKKFKENDKLIEEILKKYEARYNTKANITIYRLMVIALRAELQNILSNLKYENLEDSLNSITTMIEKYFIIIGDGNKSIAGTLAKFIGEIELLFKNAVKIEYEYYLKKEKARQEQLAIREQMRQEAEERKRLADQQKQVEKEEEKYNNEIAKLQALMNTTEDISKTNELNAKILELQNYIKELETKKDEIVKLQNGKAGNVYIISNLGSFGDDIFKVGMTRRIDPQERINELSSASVPFSFDVHSFIFSDDAVGLESKLHDILKENRLNRVNMRKEFFKINIDELEKLVADIDPTADFNKTMLAEDFRQSMSVDSILESSEDSYNDLKVNA
complement(329680..330015)         hypothetical protein; Clopa_0313                                                     N/A                 MDILDKPLLKALLNEDIPFYEVMNAFNIKTTIAFNIPSVLLGFVYLSRRGNYHLILNGEINYKTQCKVFIHEIKHIAEDMPSMGYIIGLDMQHTYIENAADELANILYDAK
complement(330047..330466)         PHAGE_Clostr_phi_CD119: RepR; putative repressor; Clopa_0314; phage(gi90592681)      2e-12               MDNNVLGKRLKILRNEKDLTQEQFGKPYNLKKSTVSQYESGSSKPDDELKKRIARDYNVSLDWLMGISDIRNPYKDASNTKIPEALNDDSELSEFWNTLKEREDLKLLFKQTKDLPPNAVKKMMRIMKAIEDEEDRNDG
330484..330498                     attL                                                                                 N/A                 AGTTTAAATATTTTA
330642..330848                     putative transcriptional regulator; Clopa_0315                                       N/A                 MNLPLLIQIRAETGLTQKDMAQKLNYKNKASYCLIENGKTKVTIDLALKIKNILKLNEDDFNKIFFEN
330988..331143                     hypothetical protein; Clopa_0316                                                     N/A                 MLLKVTVNKPKDPTELYEKFNETLSEILINKLQPEEVDQLIDLLKKDKITF
331212..331424                     hypothetical protein; Clopa_0317                                                     N/A                 MYIIFYASYINSVQNLKINFRGGKSMRISSKQKKEVISLRKQGKSYSAISLFTGVPRGDIDRILKEAVKQ
331421..331957                     hypothetical protein; Clopa_0318                                                     N/A                 MSTLVAKTLKKLQCSTGASCRELADVAGVSSSAMSRYSTGSRNIPEDVIVNLSRKSGMEELKIAYLSEKKLDIINTPVLNGIDDNIQTMIFKFIHEEIPEALESLYNISKLTMNKKSIDNNEHREQLYKEVEQVVDLIPGIKTFLIRMKQDYGISLERLDIAECKKLRQRGYVVEESW
331954..332133                     hypothetical protein; Clopa_0319                                                     N/A                 MIQMALNVVLPGSLNKTERQIRALEAVIPKDTAKDKAIHQEALKKLKEHRKFLLESEVC
332134..332481                     hypothetical protein; Clopa_0320                                                     N/A                 MIFNEEKKLFEIKKMKVDAIFNFDLESESRITINDIMYREHVVSRIIFRKYKSFRDNSTSLFIEIFMGNLELGTIVSFDKDYVLIKHSRDLNYTIRIANEYDYPKKKINPLQRVQ
332578..333141                     hypothetical protein; Clopa_0321                                                     N/A                 MSAYKQENLIGQLSIFDIPVIEKPKNITKVVEKITETKVLSTNIHEISQDQQNVINKYKSNVYLNLIIHYGGGGVGIELRDNENFETIYVNRQGKEEFKWSKQLAVMDMDKVILDNTTIATKSNVGELAKAGDFVKAYYGKRIIEGPIVREYGLGNSILNINFEMDGISCQTAIGRHAVIEILKEAI
333141..334262                     PHAGE_Bacill_WBeta: putative phage replisome organizer protein; Clopa_0322; phage(gi85701413)     8e-47               MAQYRFIYTNFWESPKVAETFTPEDKLFFLYLLTNSHTTQIGVYRITPKFIAYELGYSIESVNSLLARFEEHHKIIKYNEKTRELAIRNWGKFNLNKGGKPVEDCINKEFTQVDDKSLLLYVMDSIKSPRIRQLFIAELQRNNLLSTNDNFSDDTVYDTSRGSSTISGQKENKKENENKNKKENKDIYINPSDNVDHSVDNVDINDNSNEDIEGESKAEDTETLSENVNYEDIRNLYNNICKSLPRATTLTKKRKATLKARCKTFKDIKIFQELFSKAEKSDFLSGRNGKWTSCNFDWLINEENMVKVLEDTYINSKNTGHKKTTFNDYEQRENDYSAMEAQALEASDRAAKIAAENLANDPFDERYAKLMGH
334290..334592                     hypothetical protein; Clopa_0323                                                     N/A                 MGYLKNFSRAYDKELAIKKALSNIDQDKKDKILSLCRKLRKKDINEFIHEVDRMVKLLSEGKSFEEIEKIYGLDGMYELEKEEVANGWRFNQVRLGKVGR
334597..335058                     hypothetical protein; Clopa_0324                                                     N/A                 MEAKYIKEHNNYDLILGNRYKAKFYKDGWLLIECDDKGNSVLYREECFEREEYSPEEAAMYALKFCEKHPGWKRICDIENHENLYKNWDELSEKDKKPWINDYGILSAKDAWEEFGHKPCKVQYGFISGKGKFYKKVTDVPHLHNLMQIYKVG
335312..336010                     aspartate racemase; Clopa_0325                                                       N/A                 MKKIGMIGGLGPESTLDYYRLIIEKYRNEVKDGSYPEILINSMDMNILLSFVENKQWDNLVNCLIKGVEILYKAGADFGFISSNTPHIVFERIKELSPIPLISIVEETCKNAEALGIKKIGLIGTKFTMESNFFKKVFDKSNIKIIVPKEEEQDYIHHKLMTEIEFGKFLDETRNGLLNIVKRMIDEDSIEGLILGCTELPLILTKDEFGIPFLNTTKIHVESIIKNCIKES
336159..336344                     hypothetical protein; Clopa_0326                                                     N/A                 MEAKIGTIKTQISEFTIRDNEIARIIKDALKQQGFDLEVKPVIDVSTQFFIGEEFKVFRTE
336375..336698                     hypothetical protein; Clopa_0327                                                     N/A                 MKIEQLSFLKPIEKAIKKQEIYDATICDRCCCCKCKYSVEIYPFLTTEECKEIKEDSCFNCDECYYYGMDNENLSRNIVKFKCDKFRMSNYYSDLEAKTKRRNFKII
336763..336906                     hypothetical protein; Clopa_0328                                                     N/A                 MTNKEIAVITYKILQKRKHRKKRLESKVTMSQIDAMERSMGRKLGQI
336917..337318                     PHAGE_Brocho_NF5: gp45; Clopa_0329; phage(gi327197630)                               4e-34               MNRVVLIGRLTKDPELKFTPGTGYAVATFAIAVDRRVPNKEGVREADFIPIVIWGKQAESTANYMSKGKLVGISGRIQTRSYDAKDGSKKYITEVVADEIQFLEWGKKNEGSNHNAEYEAAGITPVDDGDVPF
337455..337796                     PHAGE_Clostr_vB_CpeS_CP51: putative sporulation sigma factor; Clopa_0330; phage(gi509140076)     6e-05               MKNIKENLILYRERICNIENKNIEIESLRISGLDNNDDCIKNLDIEIKKMELENKKIENIIKILPNKEYKIIKLIYLEGKGKKEVAVELDRTQRQINYSINKAMQIMSNKFMY
338013..338357                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0331; phage(gi509140084)      4e-23               MLNREQVKNLYLEGLNAPEIARRLNSKKDAVIKCIQRNFKDLKQQHDVAVIQRREVLKAVSYEANRYISDSAFIKKNRSIYKTNMNGDIVINKEVAPVVTWDTPRRLVNENRFI
338428..338595                     hypothetical protein; Clopa_0332                                                     N/A                 MRIGDILRENDVGNYNKLMKVRDKKKYRDLNESDIKELMSHSTYRRHKGAIKQVR
338595..339245                     PHAGE_Clostr_phiCD6356: putative site-specific recombinase; Clopa_0333; phage(gi326536904)     3e-16               MEERIREWEKGTSSPIPQQKYEKFKEKLAECSEKNKERNLMLFILGRTIGYRLGDLVGLTIGQIKDALDNQCFVIQESKQYEQWKSNLAKNPGKKKPAPREAPIGRNLEKYLRQYCKNKKRSEFAFKSCKGNGNEHISQKSFSAILTEVGKSIGLKNISGHSLRKTYATKIYEESDKDLEQVRVALNHQSIEETKRYLGIKEKMKINAALIADSDI
339510..339983                     PHAGE_Entero_phiFL4A: terminase small subunit; Clopa_0334; phage(gi281416464)        9e-13               MRSNEDLIKDNLELIESMVEKGSTDKQIAEKIGIGYSTFRKYKAQNEELKAAMAQGKEKKNQAVEQALYKCCTGYSYYEDVATKVKIETLADDEQTVLTKEEVKISSVKKYKGPDLAAQKYWLNNKEKTKWKEDPHKVDNDKKITKLKEREVNMKCE
339985..340311                     PHAGE_Clostr_phiCD6356: putative HNH endonuclease; Clopa_0335; phage(gi326536906)     3e-19               MDSLELVQWISTLLKNNNIKAFYNSSLWLHTRADVLERDHNECQKCKAKGLFSPADCVHHKNHIKEHPELAVDKENLISLCNECHNEEHPEKFLKYRRKKKQLNKERW
340435..340743                     PHAGE_Clostr_phiCD6356: putative terminase small subunit; Clopa_0336; phage(gi326536848)     2e-10               MTSAKKIKESLIKQLENKGADVDHFLSLVDDYVWYFQQEKAMQEDIKIRGHSYKTKSASGYPINKENPSVKNAIMYNKQKLAILKELGLTTENVISDDDDEL
340730..342388                     PHAGE_Clostr_phiCD6356: putative terminase large subunit; Clopa_0337; phage(gi326536849)     7e-101              MTNSKLIPEIQNYIDLVRSGKIEVCKEQLQLCDYIENCFEKENLFIDETLLHKYLSLQKYFPFKLVEWEVFCFTLHNCTYSKPGILRWPDLFILVGRGSGKNGYLAFEDFCLISEYNTVKKYYIDICANSEEQAKTSFEDVYDVMEENKAKLSKHFYWNKEVIINLKTKSRLMFRTSNAKTKDGGRPGKVDFDEYHQYEDYKSIQVFKTGLGKKKNPRTTITTTNGDVRDGPLDKLIARSERILNEQGSDNGLLPFICKLDDEKEVDNPQMWDKANPFLHYNEELFREIEKEYIDYKEDPISNSAFMTKRMNIPKGNKDAEVTSWENILATNQEIPDLTGGTCLAGIDYAKTTDFVVAGLLFKYKGKYYWISHTWVCKKCNDLGRIKVPLEEWSTEEGGNLLTFVDDVEVAPSIPAMWLAEQAQKYNITTLGMDNYRYTLLARALREVGFDTDKQGANNIKLTRPSNQMLIAPTINSLFVNHNIVWGDNPLMRWYTNNTCKKIEAHDNMSYGKIEPKSRKTDGFMAFIAAMCAGGVELEDSGETIDFGVYTY
342403..342558                     hypothetical protein; Clopa_0338                                                     N/A                 MKVKQLIEKLKSLNQDKEIIINSDEACISKIDDLGTSYCIFGTDVIPEEIE
342595..343770                     PHAGE_Clostr_phiCD6356: putative phage portal protein; Clopa_0339; phage(gi326536850)     5e-69               MKFLDWVKDFFGVDQSTVYLNQQALATQEVQLAIEDFAICMAINLVASAISKCEFKTYLKGNEVKGDEYYLWNVEPNVNQNSSQFLQELVSKLLYYNECLVLDINGQLIIADDFYQNEYALVPNYFTDVSRGTMTFNRSFNMNEVLYFKLSNTDIKQLLSNLIKGYNNLLNMAIGKYKRSGGRKGIVRLNKAPSGDKDFQQKIDDLFNNKFKSYFEAENSVLHLPNGFEYDEQNGEGSKKSISEITDISNITKEAFERVAQALKIPPALLRGDIADIGKVTDNFLTFCIDPIVSMIGEETTRKRYGKQAFSQGSYLKVDTTCIKHIDIFSIAEAFDKLIASGGYSIDELRIKCGEAPLNTWWSKKHWMTKNYSDIQDLKGGDTSGKTNMAD
343745..344485                     PHAGE_Paenib_phiIBB_Pl23: Clp protease-like protein; Clopa_0340; phage(gi526245014)     1e-43               MAKPIWLIKQSAQSNAMDLYIYDDVEGDSTNWWTGETTVSETSANYIKSQLDAAIDIQNINIYINSYGGEVKEGLAIYNQLKRHPAQKTVYVDGFACSIASVIAMAGDKVIMGPNTLMMIHHASMGAWGNAEELRKAANDVETIDSASCSSYLAKAGDKLTPEKLTELLDAQTWLNAEQCIQYGLADEIAGKEDPVIVAAQQRFKQSIQEQILQHKNKTKVPENLIKQKTNAEKLMAAFKKNLEGK
344487..345938                     PHAGE_Clostr_phiCD6356: putative major capsid protein A; Clopa_0341; phage(gi326536852)     4e-80               MVMKSKDLIQQQLKDNLVQAFKSDDENAIAQAFSGFAESVQQNVMDEFNAYQQTADKTILAKRGVHQLTADESKFYQSIIGAMKSNNPRQAFTDLDIAFPETVIDNVIADIKTAHPLLDAISFTNTTILTKIILNKQGAQLATWGPLNSAIAKELEGAIGKIDLTICKLSAFMPIAKDMLEAGPSWIDAYVRSTLSEAIALALETSIITGTGNNEPIGMDRSVADNVTVTGGVYPQKTPLVITDLEVVTYGSLLGMLSQAPNGKTRPVNSVLLVVNPKDYFTKVMPATTIRALDGTYTRDVFPFPTTVEQSSAVEEGKAIIGLASKYFMGIGAGTNGGKIEYSDEFRFLDDERVYITKLYGNGRALDDNAFILLDISKLTPATLKVIIEDALRSLTVTSEAGTTSGKTKITVSPSLTDGNTYKYKTGANLTIPVFNQVLTTGWTTWDGIAEITATTGNRIVIAEVDASNQAKAIGEATVTSMA
345951..346265                     PHAGE_Clostr_phiCD6356: hypothetical protein; Clopa_0342; phage(gi326536853)         7e-12               MATTADQVLSDIKSYLHITWQDENTDKNLTGFINRGMARLQKTAGASLDFTVEDLPRELLFDYVRYANSQALEMFEKNFESELVSLHIEYQANSVDNSGGETTP
346262..346606                     hypothetical protein; Clopa_0343                                                     N/A                 MKIKTDNIEFISFSDGICDIYTEDEEGNKSPKYNGLGFSNRVLGFNRHYAARANNVQTNAVIRIPQVPGIDTHDTLEIKNQGKYDIELIQNKFDTNPPCKELTLRQLEMFEVIL
346603..346998                     PHAGE_Geobac_virus_E2: hypothetical protein GBVE2_gp010; Clopa_0344; phage(gi148747737)     6e-14               MSTVNIDQMADEILKGLEDYTREITGEVKKVVDIVAKETNEEIKKHIAFNQHSGKYVKAFRIKNAYEDGYKKVNVWYVAGGQHRLTHLLENGHALWQGGRTRAFPHIKYGEELAKKRMEELAKEAIENAGR
346985..347299                     PHAGE_Bacill_virus_1: Putative aminopeptidase; Clopa_0345; phage(gi155042942)        2e-09               MLDVKTWLQSTGLPVAETAFIKPPSLPYIVFLTNDNIAGGDNKNCISDRSIGIELYSSRIDRDSESKIENLLNEKAIEYKKNRTWIPEDTFFETMYDFNLIEKF
347312..347857                     hypothetical protein; Clopa_0346                                                     N/A                 MSTAGDKIVLGSGKLYISEYTDGTIPDNATLEVDANLLGLIQKGATVQYKPKFYEATDDLGLASKTMLTDEDVTLKSGVMTWCGKTLAKLCATARVTEASGKRTIKIGGIGKQDGKKYVIRFVHEDATDGDIRVTIVGNNQAGFSLAFAKDKETVVDAEFTAAPMDNEGTKIIYEEDIPVA
347881..348180                     hypothetical protein; Clopa_0347                                                     N/A                 MFDVSSVTKRYFDIKMKDLVLQLEAPSLSTMKKILYLTREINESAMEDLEEAVGIILNKNTAKYEISKEMINDELDFDQLKAIVLRFLQWVLTNKQSPN
348168..348452                     hypothetical protein; Clopa_0348                                                     N/A                 MPKLKVPYYPEDDGDNEGHYKVNTVEEKIVSEYTGYDFDRLGQLNIFEFWLLLRDAIIYNNSQTKAGREYLENCWSIDKTEPDRESIRRKMSGK
348484..351639                     PHAGE_Clostr_phiSM101: phage tail tape measure protein, TP901 family, core region domain protein; Clopa_0349; phage(gi110804068)     3e-90               MANNIKGITVEIGGDTTPLEKALEGVNKTSRDLQSELKQVNTQLKFDPSNTVLLDQKQKLLAESITNTKTKLETLQKAEEQAEKQLKNGDIGEEQFRALQREVIKTTSQLNGLETQLKNTKKAAEDDEGIWDKLSSGIKKSVLDIGDSIKNGIGLSIGHDIWDKFKEGSVSVLTFGSDAQKAMNQLQASTGMSTISLNDMKKTMTDIYNDNFGEDFADIGNALGVIKQNWHGNSDEIKGLTENAILLRDTFGYEVNESFRSANALVQNFGISAKDAYNLIAQGAQSGLDKNGDLLDTINEYPVEFKSLGLNAQDMFNILQNGAKAGSFSIDKMADAIKEFSIRAKDGSSTTEDALSKLGFNVQQTEEKFSKGGDTAKQAFQQVNEKLLALKDPLLQNQLGVELWGTQWEDLQKTGIAALTNLNGSINTSKDALGEMNKVKYNDLGSAFEGIKRNLETGILLPISEKVLPELSDFSNWFTSNMPEIKAEVGNAMDKVLPIIEDLGKGLEFCTENASTLIPAVIGLTGALGTLSVLKNVVSTIGTIKEVAGGLGLISAAAEGAGVASGGLAAGLGGLAIAAAPWLLAGAGVVALGVGIHHVMTEQATPAVDLFADSVNTTTKTIKDSNGQLQQSFDTTTTKISNSTKQGVGAYIKMSDDVQGTLTKLYVNNTTITDKTVSDMKTKYDSMGSQIKAGMDKHFNEEYSSMQQFLQKSNALSDSEKATALAKLQTDNNNKKAKIDQYEQQIQQILQNAANQHRSLTLQEQQQINSIQDTMKTKAVNSLSDNEVQAKVILQRIKDYGTNITAQQASSIIQNANKQRDGAVSAANSQYDKTVAEIIRMRDESHSITADQAEKLIADAKKQKEESIKHAEELRSEAVKKVTSMNSDIGKSVDTTTGNMLTNWQKFANWWGSWWPSSKTLTVNSKASDGKDFSSNASPPQYSGGWIGQNASGTGNWTGGFTTIHELGYEIYDLPKGTRIYNHDASEDLVKNTAAEVAKSILDRYSSDNVSSTGDIYLTSNNYLDSKLIISKTDKIQASKYTKASRNKGLK
351636..352337                     PHAGE_Strept_5093: hypothetical protein st5093phage_28; Clopa_0350; phage(gi238801908)     4e-15               MSNKIIFNSKSNEDFSSMLSKFIPNPPPPRIIKKSVPGRSSSYDFSKVASGEPVFDDRQLECSLLIEGNSRADLNQKYSKILSWLMSGGSELLYSDDPGYQYIAQIEDKPQLEYINICNALLTFSFTAKPYKEGVDLAGELLWNNIDFNRDYIQTTKFDVSGSKTVTIYNPGDHMVSPKVVTNSSMSCSLNDYTAVFDEGKDTDWGFKLKVGANVITIVGTGNIDFQFRKEVL
352414..353895                     PHAGE_Staphy_EW: ORF002; Clopa_0351; phage(gi66395809)                               2e-09               MSEWGDAIRVMNASEVRDAIAVFADACANLIINAGESNAEIVVGRRSNVTGQNFNTIGQRIDGIDSQFIIIAAQLLSKLSKSDIQNLIGFADINKNLSKIDQTMLTDALLQQIAGTTPVNATPAPGSLTTDRYADGSVIAKKTNFIDIRTENLFNKDTVTVDKIIDSSGTIVNGAGNVLSDFTPVESSTTYTSKYIGNRNYYDASQVKISTELYSVGKTLTTPANTKFIRYSFLNNYGGDPNRSLSEMFVKGSTLPSEYIYYSNPIIDFKNGYTEKMKNMPNGYAGLDSNGVIPTNLLDKCSISVDYIADDTNANFDYVGTWQADTGKTGWYGETRHGSSKTNDSVTFTFTGTGIKLYDATSNNRGKIEIFIDNISQGIIDRYSSTEMLQQLAFEIDSLTYGTHTLKAVIQYEVNPNHTNLLPDQSNLATIPKWFFVDYVHVYNIQEKTFTEVSQTVIESNNGINLKFWFGNQAEYDAIPVKDSNTAYLIEGV
367472..367486                     attR                                                                                 N/A                 AGTTTAAATATTTTA
367648..367662                     attR                                                                                 N/A                 TTAGGCATCTTTAAA

#### region 2 ####
565598..568018                     PHAGE_Entero_phiFL4A: VirE domain protein; Clopa_0564; phage(gi281416460)            0.0                 MLINDREITISTAGSRKATVWTPQKLFISEFYEKLRIPVRSPESLAEYLSYPKSKQDNLKDVGGFIAGTLEGNKRKAGSVVGRDVVTLDLDNIQPGGTNDVLCRIDGLGCSVAVYSTRKHEEARPRLRVLIPLDKTVTADEYEPISRKLGQIIGIELCDPTTFQASRLMYNPSCCNDSQYIFQYWDKPFISADGVLDKYTNWRDVNEWPKVPGEKQNHQKLAARQEDPTTKTGVIGAFCKTYDVYKVIESFIPGIYEPCDDNSNRFTFTGGSTVGGAIVYENGNFLYSHHATDPAGGKLCNAFDLVRFHKFGEMDDESKPDTPVNKLPSYKAMCEFAVSDPFVATLINQERYEKTTEAFSQPVEDSEGELANWISKLKLNSSTGAPLKTTANVRVVLENDPLLKGRIRKDTFADHILGEAPFPWGIREKENGVFLWTDDDDSGFREYIEKILGFRSREVVDDALKNHSNANGFNSVVDYLKGLEWDGVPRLDTLYIDYLGAEDCAYMRTITRKAFVAAVARVMTPGCKFDYMTIVCGRQGIGKSTLFSKLGGKWFSDSIKTFEGKDAAELLQGIWIVEIGELEAFNKTDIKAVKQFLSKCDDQYRAAYARKTEKHLRQCVFFGTTNNHEYLSDPTGNRRFWPVDTEIQKPTKRVFEHLDDEVNQIWAEAVLRWRLGEPLILSPEMEEEAEKRRTTHLERDPLQGQIEAFLDRAIPHDWQKWSLERRRMFWGNGVTDTLELIQRDRVCAMEVWKECLCEIRNMSKGEAHRINAILEVLPGWERAGTMRFGANYGKQKGFRPVSIRKN
568311..568592                     PHAGE_Bacter_APSE_2: hypothetical protein APSE235; Clopa_0565; phage(gi212499740)     7e-20               MRENVIESYLVKKVKEAGGRAYKFVSPGNAGVPDRLVLLPGGKIAFVELKAPGRKPTALQTVQQKRISDLGFRVYVIDNKKAVDNFIWREERM
568592..568798                     hypothetical protein; Clopa_0566                                                     N/A                 MASKKVYRVKKEHIKEIPKNSNVFILNAFTCGYVFVRVKDRKEVYMISTTVTKKTMKIELIENIEIVG
568805..570175                     PHAGE_Staphy_phiSauS_IPLA35: putative helicase; Clopa_0567; phage(gi215401142)       2e-130              MKFIPHAYQRYCIDRVLTDKAIGLFLDMGLGKTVITLTAINDLKYNKFAISKVLVIAPKKVAEATWAKEAEKWDHLRMLRVISVLGPKTKRIRAINTPSDIYVINRENVPWLVEYYKNAWPFDMVVVDEFSSFKNHQAKRFKSLTWVRNHIDRFIGLTGTPAPNGLLDIWAQIYLLDEGKRLGKRITHFRERYFQPDQRDRDHVFSYMPKPGANETIQELIGDICVSMKAEDYLELPDCITVTTPVILDSKAKKSYEKLEKEMLLEVDESTIDAGTAAVLTNKLLQLCNGAVYDENRNIVEIHSCKIDAFLELVEGLNGQSALVFYNFQHDLMRIKKALEGMKLRVRQLKGPQDEDDWNDGKIDILLAHPASCAYGLNLQRGGHHVIWFGLNWSLELYQQANKRLHRQGQKDKVIIHHLVVDDGVDHDVMMALEDKSGTQDNLMNALKARIKKYKE
570188..570736                     PHAGE_Bacill_BCJA1c: hypothetical protein BCBBV1cgp27; Clopa_0568; phage(gi56694895)     5e-17               MEQNISVDEAVKIGVREGIKYIKEQEYYKTKKRYDRRLRNTRLLLKHYRGLKIHGKITDSSVNAIYEDNAIDVLDDIEAINDEEQYIQALSRTKKRTLIIVGHINKAMKYYESVCKSEGKAKERRFNIIKYIYVDVCKDEVAPTYEEAAEHFSITVKTIGRDVRNAIEDLSILFFGIDGIRL
571398..572165                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0569; phage(gi509140040)      1e-48               MPRQRSPSRDKAFEIYKENNGNIDLVKIAETLNLSPGTIRGWKNKDQWDDKLNGTFQTKVKKNTERSKRKKGGQHGNKNAKGNSGGTGGPPKNKKSETHGFFSKYLPEDTFDIIQEIEQKDPLDILWENINIQYAAIIRAQRIMYVKDKEEMIKELKKQTRGDTSDTDEYEFQFSWDRQATFLQAQSRAMTTLERLIKQYDELLNKSLATEEQKARIEVLKSKVPGKDKLNIQGQLNAIAELINKPQEREPLDDE
572317..573636                     PHAGE_Clostr_vB_CpeS_CP51: putative phage terminase large subunit; Clopa_0570; phage(gi509140041)     7e-27               MINYAPLTGRQSEYIKNSVDSWLSVLEGGKRAGKNIINLIAYSMCLEVHPDKLHLVAGVSLAAARMNIIDSNGFGLKYLFDGRSREGKYEGKEALFIETNTGEKVIIIAGGGKANDAAKIKGNSYGSAYLTEVNECSQSFVQEVFDRTLSSSKRQIFFDLNPMPPSHWFYRDILDYQDQLKENGENPGYSYAHFTIWDNLSIKNDRLRAVLKPYDKSSLWYQADILGKRTAATGRIYTGYSYKEVVITRDYIKDKKFIQFSIGIDIGGTDATVATLTGYTVKYGEIIELDGYYHKQGKSSGYTHDKYAKEIVDKIEEWIKTYPSFFIGTIIFCESADKLFRQALSNELRRRGINIQVVPSYKKEGIIDRIRLVNILINQGRYKIMQHLKPWIEAIENATWDEKKRTEGEWVRTDDGSYPVDCLDSSEYSIQPFKKRLEV
573639..575159                     PHAGE_Clostr_vB_CpeS_CP51: putative phage portal protein; Clopa_0571; phage(gi509140042)     7e-164              MGWFKNMIMKMLNVMPAPASPITIQEPLSFEATVLRNRIWYRGEPSELDQFFKNTVIDLVSRSRFWAAVPSAKLNIRKMHSGMPSIIVEALADIVISGINTIEVNDETQDAIWQEISEDNKFDKLIKNMIIDTLVTGDGAFKITIDTDLTEYPILEFYSGEKVDYTVKRGRIQEVIFYTDYAANDRNYRLVETFGYGYIRNQLLDERGKEVPLIMVPELAGMQDATFDKSFMMAVPIKFYDSPKWDNRGKSIFDNKTDAFDALDEIISQWIDAIRAGRVQKYIPEDLLPKDPNSGKIMQPNPFDNQFIQLNATFSEDKPGTTTMLQPTINYAAFVESYASAVDMCLQGIISPSTLGMDLKKRDNQVAQREKEKTTLYTRSKIIETLSEVIPMVINTSIKAYNSLKSMAVGGDTEVTLDFGEYAAPDFENRVDTIGKAKLNGIMSVEQCVEQLYGDTWTEEQKAEEVSKLKEEQGLTTVDPPAVNGSDNLPADTTLTGNQDNLPKGE
575162..576382                     PHAGE_Clostr_vB_CpeS_CP51: putative phage minor capsid protein; Clopa_0572; phage(gi509140043)     3e-134              MSGNNDSYSLREIFQQMELDLIASLKRNFYRHKNEELKEGFQWEQWQLSKLRNIEKYRKQNEKIVGKYSDPIQKTIDAVLQESYKAGENRVTKLINQIKNWLGKYRRKEAVIEFPSDIQRSSSPQGMEKLKDIVSRVMNKPKNNPPPQETNFFGMNDKKLKALTDSVQHDINVGQHSVLRKMDDVYRQTIFKTQVFMQSGATSLNQAIDMATKDFLDAGINSIVYKDGKRVNIAAYAEMALRTASQRATFLGEGKKRDEWGLHLVVVSAHANTCKLCLPWQGKILIDDVFSSGSKADGDYPLLSEAMKAGLLHPNCRHTLATYFPGITKLPEVPDEDTSTSNYKAEQQQRAIEREIRRWKRREAGSLDPKNVNTASDKVKELQDRLRQHLRDNPELRRDYSREKAR
576388..576558                     hypothetical protein; Clopa_0573                                                     N/A                 MIKTIILDLAGLFIIGSAIYDMYVKHDIKKTNASIKQVNEECKKWIKENTNSSEVK
576559..576720                     hypothetical protein; Clopa_0574                                                     N/A                 MDEELDVKIDKIIRFKKGECIKVSVELSKIESKQLKSIKDFLDTMFKEIKELF
complement(576712..577416)         PHAGE_Strept_SM1: gp11; Clopa_0575; phage(gi32469442)                                2e-32               MKKCFIVCPIGNDGSDTRKRSDKLLKHVIAPVCNECGFDEPIRVDSLNSSDSITETILKHLTESDLVIADLTEHNPNAFYEIGYRTALNKPIIHLKDKSDSIPFDVYAIRTFDYDLTDLDSVDELKERLIQTINSISFTDSTSSVNEDSSKTFNSQILQELFVIQDNIKDLDSKISKSSTDTSVISVLADKIANNNKTSPEEKFLEQLIPVMMEDPQKLNSLIEFSNKINKNSK
577559..578134                     PHAGE_Phage_OH2: methyl-accepting chemotaxis protein scaffolding protein; Clopa_0576; phage(gi526118331)     1e-22               MNKEQFIALGLTEEQAKKAAEASTEELKSYVEKQKFDTVSEENKNLKTTVKENATQLENLKKSAGDNEELKNQIATLQADNATKEQEYQGQLKDLQLSNAIKLSIAGKVQDEGIVSGLIDKSKLILGDDGKVTGLDEQLKGLQESKAFLFKQEDTTNTTIPGFKLGADGSGSGGAANINTQLDAIFGNETK
578152..579030                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0577; phage(gi509140048)      8e-79               MAINYVDSFLTQLQQKYTRELTSSALTSDNVKFIGAKNVKIPRMTLSGYKDHNRAGGWNTGTYGNDFEIKTLAHDRDVSFYVDAEDVDETNQILTVANITNVFLTEQAIPELDKYRYSKLYADFVGFGGVADTTVLTLANILTVFDQLMQNMDDANVPGSGRKIYVTPAVNTLLKQANQMQRFINVDGSTSGTINRTVHSLDDVDIIIVPSDRMQTVYDFTTGAVAGVGAKQINMILMHPSAVIAPIKRSAIYLWAPGTHTQGDGWLYQNRSYTDLFLIQNKVPGIQINKLA
579042..579269                     hypothetical protein; Clopa_0578                                                     N/A                 MLAVQGNKQIKIEEKDKAYYLTLGYDIADVDEKGNLTITENAPGKTVTYAKYKEALDKIVELENQIEALKNPKGK
579272..579631                     PHAGE_Clostr_vB_CpeS_CP51: putative head-tail connector protein; Clopa_0579; phage(gi509140050)     1e-33               MVYVDSNYYKTTFKGTVIPDDELDNQLELASDNIDSLTYNSIVAAGFDSLTPFQQDKVQKAVCLQAEFLYQYGDFINLPVNNYSAGSVSLNLGNGSNGIKAPNTVMHYLKQTGLTNRVL
579641..579967                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0580; phage(gi509140051)      2e-31               MKGKLPFPKWILNTDLKIFQTKTGEDGGPEETILFDDKAFYEEKTRQTLDKERKLVTLSGKVIVPGDINPGKIIEGCVQVGEVKRDIFRSSRPKNPDGTVFSTELDLM
579967..580350                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0581; phage(gi509140052)      1e-48               MKAKVSIKLNNSAISTLQKAQQQALEMTMEAVKTDIVTSAVVPKNTGELERSGYVDTSRLQDMVASIVFDTPYARRLYWHPEYNFRHDKNVNAQGKWMEAYISGDKKDFIKDTYMKFFKELSKGLVK
580350..580736                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0582; phage(gi509140053)      8e-48               MLLSEIKDWLKTKIDCPNWYVGKIDGSVEQCIGIYSIVGGKSNIAVGGLNNTSYAKKSISILIHWGNQTTPAEQKAQEVYNTFFGQSAVIGGKRVIQFDMRTSEPIGVGTDSNDIFEFVIETTIIYER
580747..581193                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0583; phage(gi509140054)      6e-53               MSFSGVFPVYDLVFKIGTKGLASVATDMMPIADMESFAIKMAGKAETWIPMTTNGWERNIITSKGFAITLKGKRNVGDSGNDYVAGLAWKTGLSCSTMAEIDFPDGSKLAFNCAVDVTNPGGDKSEAMTPLEFDLKSDGEPTFTPAVG
581207..581536                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0584; phage(gi509140055)      4e-18               MGKFYDISNRMDNTKSEVKIDDEHIFKINTHKAVGLQLTDISKDESLNDYERVDKIIKIGLGEEAFNYIESLNLNMSSYKPIINTIIAALNGVEIEEIEKAEEDQNKKK
581551..581868                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0585; phage(gi509140056)      2e-40               MYDDWGLIEASFTAQYGIRLRNEPDMSWSEFCTLLAGIMPKTPLGQIVAIRSEEDKDMLKNFTAEQNHIRDEWRNRQIDDMTEEEKQNSIKEVQELFAKAFGQSV
581920..582444                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0586; phage(gi509140065)      4e-28               MGLKDFMKKMADKQSESNEKIKSKIEEGKEEIRERNEKAKEKIKANNEKYAQKRAEKAALYEKKQAEKDKKISDINDKINKIRANNPNAGKIVLSEKAKEKEYQKERLKQLKRDHIPFCPKCKSTQLTFVNKKLSIGRALLGGAALGETGAILGGITSKKGKVKCLNCGHTWKL
582495..585887                     PHAGE_Clostr_vB_CpeS_CP51: putative phage tape measure protein; Clopa_0587; phage(gi509140057)     0.0                 MSKKGGVIVADNESVGKISLDLELTSDLSKQIEQAASKIGDQLKTALQGLGDLSFKGLGDNIGKQMTSSIEDSMKAMQQLIEQNLSKALEAAMANMKAIKIPVEFDMPTNMAMPSQTTGTKIPQPRGPPMPKMSTGVNMEALKAQIDNLGQSLDITNAKIELQQAKLVGLKESYNQTFDESRKNQLQEQILKTEEAINKLTATSNKTGFALADLDDQFSRLSNASKNSGSGITSFMDKLKGITDVAGKVGGSIKNAASSMTDFGNKTNSARNHSYGFFNSMLQWGIIFPMIMNGLTAVGTYISSAFMANVQFADSLNQIKSNLMTAFMPIYQAVLPALNSLMSSLATATAYIASFISQLFGKTYQQSFDSAKAMQSQIGAMDIAGKQAKKAADSLGGVGKAATNSADATTKAAKQVKGALAGFDEINQLNLTVNKAPKAPKVPTPAGSGVITPITPMANMGPIESTTSGWADKFKNILSNLWKPFQQAWATEGQNTINAAKHALTGILDLLGAIGKSFYIVWTNGTGERILVNLLKILQDMLNIIGDIGVTFANAWNKGDIGTQVVQSLANAFNNVLSLIDRMLQAVRTVWGQEGPKFADMFMQALKAGSGVIENITQKLGLIWDNGGQHAFEGLVRLGLKIGELALFIFTNFVTPFVNWFVNMIAPAIVPVLDVIGKLFDKLSGLIDYLMGDGTKYTRDFLILFTGFKVAGFIANIVSSTLSIIANTTAKISNTLATSSNNAANEAGMIAKTKDIGANIQLIALYARDAVVKAASTAATIGRTIATTASTIAQIAHNVAVGAWNVICGIATTVTIAFGAAIAFLTGPIGLTILAITALIAIGILLYKNWDTIKAKATEVWNGITATFNSFKNWLGSVFSTDWSQKFAWMGDILNGFLRNISNIFGGIRQIFWGIIDFIAGVFTGNWSRAWQGVVNIFGGIFNTLYGIAKAPLNGLISLVNAAISGLNQIHVSLPDFMGGGSFGFNIPRIPYLAQGGIVDRPTTAMIGEAGPEAVVPLKNNTGGLNMLASMLSQKISTIQQPQLTMAGSSSGSVSQSKSDFAALKTAIVEAIKEDRQQNNDNVVKLLQIIVDILKNLGMDIDVDGDKLARMVIKQLNRRTRMTGKTELIL
585898..586245                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0588; phage(gi509140058)      8e-32               MSFLINGVAVTAPKTFQVDLVDLDSDTTQRNAAGVLMRDRLRQMRKLQCEWGPLTTVEISTILHAVDPTSMPVTYPDPYAGSDQTRTFYAGDRTAPAFNFNSGQWLGLKFDLIEI
586263..586532                     hypothetical protein; Clopa_0589                                                     N/A                 MDIKETVSLSANLTVKDASNNDTVVASLSVNSLDSANMNLGINVNTYNKALLTQANAVNAAGETVAQQYATFETAVKTKAKSLGYVIFG
586549..586929                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0590; phage(gi509140060)      9e-28               MKFSNQELLKNIQEIGHVSQKELPVKVSYAIAKNISKIESELKIYGKEREKLIDKYAQKVDGKPLSDKNDQIIFKPECKEDWDKDIKALLDIESDINVHKFSFSELNGFKLSAADLMAIDYMIDEK
586953..589772                     PHAGE_Clostr_vB_CpeS_CP51: hypothetical protein; Clopa_0591; phage(gi509140061)      2e-86               MYNVSQNFLNVIKQNGRTFKATVNVRGTIFDNNNITEIDLEENVNPTESFMIGGVGSSKLEVTLLNVPSSLILENAPVTATISLLVNGSYDDVPLGVFTVDEVDINKNSTKLTCYDNMILLEQAYFSDLSYPNSINAVAQDICSKAGVQLATVLPNTQINKIDGYTYREAVSFIASFLGGFARFNRVGQLEITTYNDSGVSLDKNNYFPNFTTSQNLFTIGKLTCKAGSTTDSNGNSIDNILTAGTNGNEVQFENPLMTQDQLNSIYNVLKNLSYMPYSMDWQGNQALQAGDKITITDLQGNVYNTLLMDNKITYKGAITATASAVGKTQTGQNFSSSGGISNTVNRIVTEQANIKVLLANTATIEDLTATNAKIDNLVVGTAQISDLAVTTAKIAYEAVGTSQIANLAVGTAQIQTGAITNALISTAAVGTIQIADGSITDAKIVDLTANKITAGTLSVERLEIRGTNTSIVYALNNITGALQSQNVDTLNGEIVTPRTITTDKIVANAITANEIASHTITANEMVANTITASSGIIASIDAGKITTGTLDASLINVINLNASSITSGAINSITITSTSGNSKLTINGASLIGTINGVKGLDIGDHSIGFQDYSNTGAVAAGMFLSYGSDATNANTTGLCIGTAKGFLGFGKEAADGSNITTDFLINYGYNPNGVQEKFIYYGNINMQQWGIYNVQYLSGGGGNIGIGVGWSNGFKNILKIAGGTGKFVLAGDQSSDQWSDFYGNINFNGWTIRGIKEIQDNASMSGGTITINPGNSGGGASFDSGGINFYRPTYFNGWDVGLIANLSCSSLYVSGAKNRIVTTDHYGTRALNAYEMTECYFGDMKRNNIVNGICVVNLDPMFLETVNSNEQYEVFVSPYGNGNVWVDPGEMYPNYFIVRGSADIPFVWEIKVKQRDFENTRMESVEVDTSTVVKQAS
589819..591978                     PHAGE_Bacill_IEBH: hypothetical protein IEBH_gp65; Clopa_0592; phage(gi197261575)     4e-07               MILPYNATFDLKGNNSKIDNIKCTVGDTNAYQLNVSIIIDKDAANLTGHTAKITFTKADKTKVFDDMIIDDAVNGKMYVIFKSQVIAFAGRVDADIEIYDSSNGRLTTGSFAFMVGTGQLDDTAIVSTNQFTALDTALAEVTDFVNTKTELQNARQGKASLLVNLQDKDSQAADIKTYKENGNRLYNVLHRMLDALIVKIICYGDSITTGQIPIAGGQAVDNYPAVLQTKLRKIYNNNNITVINQGNPGMDTTFGLANIDTQVISQTPDLCILMWGTNDGTERMDLATFKDNWRQMIKKCLKAGIEVLVLTCHTIYKPDDDRMHRQELYAKATIEIAKEMNVQYINMFEETSNIVSNKIEVPIVLHPDMVHFDQNKYFYISDIVINNALAVDDFKNILQVNDDIVVPIWHSPYIQTDIPATAEYDQPLSDYKKTISLAADTSKGTYLRFVFFNKKKNMNLVLAGSKGSGGGKVTIVDNGVNANMINFYSGVGTPTLYDVPNTAVENLSYGLHIIEILNTNIVLGQATAGVGSGYFTVFKIMKNKNINTSSYGSNAPFTPEAHMKIIDGVMKLTDGDATKNSQLVLNDREFIELKTGKTLVIEAQGTFINTGGISWFNNKPSTAFPSGYAFSYNSGNATIYKSDGTTYSVLLAGATALDNSVERTYRITMTAAGVITAYIDGTQVLQVTDTTENAGYVGVYSGVGAIGTITIKRLEYCYI
592056..592469                     PHAGE_Clostr_vB_CpeS_CP51: putative holin; Clopa_0593; phage(gi509140062)            4e-33               MKRQLLGDNPLFNGMVAGIGGIFTYILGGWDTPLTVLFWFMGIDYMTGLLGAIAQHKLNSKTSYRGIAKKLSILIIVTVAVLLDRLINNDVWVFRTFVCYFYIANEGISILENVGKTGVPLPQKLINVLEQLKKEEE
592473..593426                     PHAGE_Thermo_THSA_485A: glycoside hydrolase family 25; Clopa_0594; phage(gi397912616)     3e-23               MKGIDIYSGTIITDWNAIKTDGVEAVYVKATEGINYVNPLMDSQYKKAKGRGLKVGFYHFAGRNVPAQEHQHFMNTISKYEQDLKPVLDYEVANPDMNFVAAFMALDANLLLYAAHNVADKANLPKNKIWIAEPGAAPSDTKGYAGLQYSWTGRVAGMQGDVDIDLFGSDVLIDSNNVVLAVAPQVQQPVQQGDPSVRIIQQQLNYLIKANLVVDSIRGNLTNTAIKVFQGIMGLVQDAVWGPKTIVAITEIYSKPLDGVEQPHHEYATRFIQWIVGATIDGVFGNQTKVAVQNWQAAHGLVPDGEVGPQTWAKMLG
593484..593888                     hypothetical protein; Clopa_0595                                                     N/A                 MLSQIVINEIIIPVIGAGVVTVLEVGRRQLKAFLDAHKDLIEKQKEALIQTIGIDQYNKDVAIVKNAVFAAEQLGKEFNWEGAIKHSKVLGLISGKTGLTDEEIYNIIKAAVLEVNSLRTSTETPTSITTKNIV
complement(593949..594833)         PROPHAGE_Escher_MG1655: Qin prophage; predicted tail fibre assembly protein; Clopa_0596; phage(gi16129505)     2e-06               MKRVMIYNYDSFDNFYINAKEKCLKDGEGIPAFSTELPPPNDIPDGFIAVFNTKKNQWEIVKDEFWHVSIEEINYYTGSDTHGIPMLPTLKINQFPNFKCIPQLFNSGRFSMYFISRIDTINEITKQIYAEHYRFQNSTNGITTTEPTKYKNNIEFVVYLIRKSIDELITLTYCLLYYEEMLSTKKLKITSIGDLLDSRNDKITKLIKDYINYDTHSEFLEIINSIHNSMKHDIFSSETVTIFGESYPTIITLQANWGNLNKIKYHNHSYGQIILGFSNFLLDLFANSIKEPEN

#### region 3 ####
1924839..1924851                   attL                                                                                 N/A                 TATTGATAAATTA
1925208..1925777                   PHAGE_Clostr_vB_CpeS_CP51: putative resolvase; Clopa_1891; phage(gi509140089)        5e-25               MLVGYARVSTEEQNLDRQIDALTKYGVDERNIYQEKITGTKRYREQLDKMIDELKANDIVIVADITRISRSTKDLLNIIEDIKSKGASIKSIKDTWLDTTADNPYNSFLLTVMAGLSQLERDLISQRTKEGLASAKARGREGGRPNKRNDKFDIVKLMCKEGYKIKDIIQQTGLSRSTVYRILKDLEGN
1925829..1927070                   PHAGE_Clostr_phi8074_B1: putative terminase large subunit; Clopa_1892; phage(gi431810360)     2e-130              MPQPINITISSKIFNKAYMPYLQDYEHRFNVFYGGSGSGKSHFVIQKMILKYLKFPNRKCLVIRKVGATLRDSVFALFKSVLSDWHIYDKCTIKESFFTIELPNGNQFIFKGLDDSEKIKSIANIDDIIIEECTELNLDEFSQLNLRLRSKNKFNQIYCMFNPVSKANWTYIKWFENGYNHDNTVVVHTTYKDNKFLPKEYVNSLLEMEKDNPTYYRIYALGQFATLDKLVYNNWKIDNFDWKELIKNNNKLTAYFGMDFGYVNDPSAFVAILVDKEAKKMYIFDEFYRKGLLNNELAKMIKSKGYSKEIIIADSAEQKSIEEIKRDGIYRIKGARKGKDSIINGIQFIQQYQLIINTNCTNIVEELSNYTWQKDKSTGEYINRPIDKYNHLLDALRYSCEDLNKNKVRVRFL
1927189..1927485                   hypothetical protein; Clopa_1893                                                     N/A                 MFDTEITEKVQNKLKDIDITKDINVDKVEIYQNLKDKEQWVIKIILDNGLEVKDVIHKEVFKMDNIVDRYIANHFTNAIKKAVIKHNQRDFKNGIIKK
1927528..1927797                   hypothetical protein; Clopa_1894                                                     N/A                 MKNILSKIKDYFSNIFTGFKKKEEPKPRYKLHDDVMCAIEIEDEKFLVRGEIWKVEIDGYLIKDINNILGNGLDKLWFVKEDDVIELSN
1927842..1929986                   PHAGE_Marino_P12026: phage portal protein, HK97 family; Clopa_1895; phage(gi399528319)     3e-21               MYRPRTKSGNTQIHSNSMQGKQKKYNGYASQQINIPPNLTTGDFLRTYGDGSNWLYACVSKISQNIADVDWSAYSGDKELTEKQSQALAVLNHPNPYISRYELMELTDMWMSLCGKSFWVIEKDKAGRNREIWPVSPLDMWIVPDRNDYIKGYIYKSGADQIPFTPDQVIFFNNPDPYNQYGGIGQAQGCRNSLEIDKYSNEHNRNFFYNGAKLSGILNVEQDLDDESFDRLTEQFRDNHMSVDRAHSIAMIEGSKASFTDLTMNNKDMDFYNLRQLTRDEILGVFGVNKSILGLDQTSSLANMETAEYSFQKHVIRPRLRRIQDKLNNEYVQLFGEDDVQLQFTDPVPANKEFLVATIGQLTNKMITVNEGRKILNKLLDDVELDLLSDGDVIYNPMNLVPMGTPPVTQQTVPTSDATDNNDTTEELPQKSIRKTNKSTKAKLKQLIQKSNITRIQERDKMSKPLENEFQDTMTKYFKVMKDDVIKKFNDGSRNPVDLVVWDKTLTQIVTPLYAKIFKTSGNAVVNEFKGYSNILRKDAGNTDNVNIVFDYKDPNVTRAIKNKVMKIKGVNQTTKDNVAELIKDMYESEEDNFTIKDISDAISNMPEFDEARAETIAQTEVMSSINQATISTYQQNSNLIDGKSWLAVGDSHTRDSHIQASMDYDESNSIAVDDYFNLNGNDCLCPGDGELPPEESINCRCCMMPVVKVDETE
1930050..1930958                   PHAGE_Vibrio_pVp_1: putative prohead protease; Clopa_1896; phage(gi422937763)        2e-08               MSKQNKQFVLETKVLDEANRIIQMTGSTEDYDRVGDKIIMSGVDLTNYLKNPIILANHNYGSDEKSTCIGKALDVQVIGSQLVFKIQFADTPNGQEWFYLYKNKFMNASSVGFIPLESEPNSQGGYTYKKIELLELSMVAIPCNPECVQRAFTDGKISKALFDAINKNKNNGSEVIENMKVEEVKELITNAVKSEVKTLEDKHNEELGDKVKEIDSLNAKIKDLEALVQGKSGAKLSQSTCDCLTKACKGITDHVESIKSLIDVVNTQETDGDNDGGDTKEYTQEEINKAVQENINKILGGK
1930961..1932076                   PHAGE_Strept_TG1: putative major capsid; Clopa_1897; phage(gi410491913)              3e-13               MAKLTKKEYEDLIKSTTKAVLEQKGLTEVVRKLKFNEKPIDEMDKYEKTMRFFQAKMDNNRAEVAKYCGGKVKDLSGNTSGSGLELLPTEFHSDIIDRVKADPRALRNLCTVVPVTYRNGTWPVGATGISLSYESSDTNPITATSPTFSSLPYSVTRLDGYTAISRDLLSDSPVDLYNYLAKQYAKAFVKQENLSIMTGTGTNQPTGIVNTGSIVSVASANAGTTNVLTCDDLVQLPFNVDVTWRDGGAYFVNTSIVRQMKLFKDNQGRYLWDNGDVQAGVPASFNGYPVYEFSAIFPSNLTVNSKTTCTEAVFGNLEYYYFFDKMEMGSEINTQSDQAFKNHEALVKMWERIDGKLSIPASFALLTGFLA
1932131..1932448                   hypothetical protein; Clopa_1898                                                     N/A                 MKIKILIFVPRDEIGTMTDLKPNDIIAIDDTIAEKLIEEKKQNLYYKLEGFLMIIVKFIRPFQNYREDDIAAFEKDRVADKIIEAGYAEEVSLESTAIESPKKSQ
1932459..1933058                   Phage QLRG family, putative DNA packaging; Clopa_1899                                N/A                 MSLTTLDNVKSYLQITDGSEDSFLTLLIGSIQDLIENYCHRHFELATYTAEQHRINHKVFVYNYPIVSVQQIRRSSDDVLDIVLTQDDMTGAYRIYPNYIEMIDMKYVTMSGRTMYAMKEESYVEVDYTAGWTQDQIPSDLMLASTKLVALEYTISREGRIGLEMEREGYVQQTYYKNNAQSLPADVQLVLDRYKKVRV
1933063..1933374                   hypothetical protein; Clopa_1900                                                     N/A                 MLATTTVGVLIPIFTVNANGQKLPNFHPNTPDRTFKGNFQPYRYNVQDKPYGITDSTSNWLFCKDFNLDASMHLLINGSQYKIDSISAYTKHVELFLSKVVGI
1933371..1933853                   PHAGE_Staphy_SpaA1: phage protein, HK97 gp10; Clopa_1901; phage(gi399498874)         8e-12               MSEIDDELNDWLNRVQAKTEEINNAVDQGLLKSALYCEGQAKQTANSIFTNNPPVNEKGEEMWEHTGLLEASIGSGMNPELTHSAMIYCSASYAKYLEYGTGIYAVNGDGRQTPWCYVSNTGVLNFTQGMRAKPFMYPSVFNSQDQIQSIILSYVAKAVV
1933854..1934237                   PHAGE_Bacill_Fah: structural protein; Clopa_1902; phage(gi89152488)                  2e-09               MQDNTEIFTILNAIASTEYQYPQSLVTASTNGQGVPADFFPVISYFDSNHNAMQYQDGKSIIEDIEYTVDVWERANPNTGELISIYSNVDKALRDNGYRRITFANLYETVTQINHYSMRYKKAFEET
1934280..1934828                   PHAGE_Bacill_Fah: major tail protein; Clopa_1903; phage(gi89152489)                  1e-16               MSNFISIDKLYYAVQTKDDETGATYSTPKPLGAAVQISADPTVASGSFYGDGFLKEQAYMVTDAKVSVETESLPIEIYAELLGHELDSQGGMTFGKFDQAPYVCLMYRRQKVNGHYRYIKLLKVKFQDIKDDGSTVNNSVKIQDETLDGSAITRIFDGQWKAIKDEDAEGYTDVSTSWFASV
1934914..1935225                   PHAGE_Bacill_Fah: hypothetical protein Fah11; Clopa_1904; phage(gi89152490)          4e-09               MKITLMIDDKKKTFTAPFIGGRRLRDAMAMSEEMEGKQIGVESLDKIVDFMVDIFGKQFTIDDLYDGIESKELIPFYQKCIQKITGNLQNKANQLAELSGKNA
1935261..1935458                   hypothetical protein; Clopa_1905                                                     N/A                 MDFIYELYDSLLWVTKSDGENTYKEPWYTQNEIDEMDIFFWLDYKIYMLKKDNKETIARYDNIGL
complement(1935466..1935624)       PHAGE_Bacill_IEBH: hypothetical protein IEBH_gp73; Clopa_1906; phage(gi197261583)     8e-06               MSNKDLKNRTPISNAINTKLWNELKEYSKQTGIPISKLLDRAIELYLESTKK
1935758..1936093                   hypothetical protein; Clopa_1907                                                     N/A                 MKKRKSSGVAEYAALGGLAKVSRNKNVNNMGGIFLIVSGILLIGEIIKLPFKILWKMTILACKLAYNCFKYFIKFSILILKLGYQGTIYVTKRLYKAYKSYKTNKENQVIK
1936154..1938724                   PHAGE_Lactoc_949: putative tail tape measure protein; Clopa_1908; phage(gi327197973)     1e-32               MADNGLALNIPINAITEGFNKSMQGLKDNVNGAMGGLKSGLDTTREAMGAVGIMAFGYLDGAIKSASAAQQSTVQLQGLLKNQGIAFQDTKKDIDNFTSGITKMSTYSAGEAKNALDNLTMKGMKYSDSLKSTSALSNLAAGTNMDLTSASNLLAQAYNGKYTQLMKLGIVTKEQVKNGISYQQVLDDVNKRFSGSSQAQMNTYAGEMKILSNNMAGMKTAIGSALLPVLTNMMETINKGITPVINFIKAHSQMSAVILSSVAVIGTLIGGFSLFQKVIGILGPSVQGIVGLIGGLTLPVAGVIAGIGLLVLAYNKNFGGLQTFLNGVFKNISIIFNTFTGDMKKGMSLPQALSDAFTKAFGSQAGKNVSKFFTDLQIIWNDLQNTAKKVWPQIYAVIQDAFKGIQVIWNTILKPVLTFIIQQMGQVVQWVQANWPLISQTIQTIMNDIVTVIKVAMAILKPIWELGWNIIKNIVPPIFNLIKDTISTVIHVIEDILKLAMDLINGNWKAAWNDVCNIVKDVFGGAKKIISDILDSIGGVFKGMGQTAMSWGHDLIHSIMDGLEHAKDDIVNTVKGVAGKVVDTFKSIFGIHSPSTVMYDIGGHLVQGLINGFSKNDITSFVKGWGGSVMSSVQTSMGGNVTDWLTQAIQATGQSMSTLPALLQIAQHESGGDPNSVNNWDSNAKAGTPSKGLMQVIDPTFKEYMMVGHNNILNPIDNAIAAIRYMIGRYGSVNNVPGVKSLMAGGAYQGYADGTLNSTKGLHMYGERGIELGWSNGGDGVLNNINTTALLNTPAILQNLTGAIQALTSNQVNKQPSATTNNNNKSVNIYVDNMNVQDKGDEQTTLQQLQFMAPLT
1938740..1939540                   Phage tail protein; Clopa_1909                                                       N/A                 MDITQINLNGLDLISNDYFFNVLGLFDINKDIITNDLYTDGISYNRSKIKEKTLVMNGYIKTSDTDKITQLNNVLYSNGLKALTITINGFHQVICNVEISSRIADTNFNSQKISLQLTMPDPYMYLTGVDPVWLQPQSNNGFRPPVIIPFNTGGTTSENEVIQNMGNVISYPIITIIGACSNPTITNTTTGQSISLNVNLNDNDTLVIDNTPQNRGIYLNGIGNMGLKTSIGWINCEPQYNYFAFTRSSSESDKSHCLVYLQSRWL
1939543..1940304                   hypothetical protein; Clopa_1910                                                     N/A                 MDYLKIYDKNHNILDEIDIFNNDLTYGWTLNDIDTASFSIGLENNKCNEINLQFRNLIEICDGDTGIVKWGGQISGLNFNDQAVKVNCIDNLSLLKWRRMRAKTYTNLTYGSLFTQMINDANAITPSTIVTIGNIDNTAIATTRTVTNTEDLITNIQSFAADLNYDFNVDVDRKFNFYTRKGSDKPYYSLTYGGDADNIIKVPTLAQDIMSMANSIYSEISSPVLNATAQDDTSIGMYGLMEGTYSSSNSINS
1940609..1941334                   PHAGE_Paenib_phiIBB_Pl23: tail protein; Clopa_1911; phage(gi526245027)               1e-05               MTIKTNFFDGIAYNSGDLIAPWQALLSNGIFNVSGGALAVTQNSTPNMTVNVAAGSCMLNGYFVNNGSPISVPINGNASGYNRYDIIVVDVDLGSATTTIKAVMGTPSSSPTVPLPTATQIVIANVFVGNNVSAINTANITDGRANAGIGSIYKSLVLGSSGYILFTCGLMLQWVANGVQQGSYGSTAFLTNFPNECWHVFATMEATSAASVSVANLTTGNFNSSCNVSGIPKGHFFAIGY
1941470..1941922                   PHAGE_Vibrio_11895_B1: hypothetical protein; Clopa_1912; phage(gi472340050)          6e-09               MENQGKYIVDMTKLPFSGIVQNITDIFKLYVPTLQEVQQTKTIEIRNDYNNAVIAGFTSSASGTAVNYAYDEVSQTKFMKVLMSMSANIITYPATIFAADGSAIEFTQEQLTQLYKDIANFEIPLETKLHTLLSEINSATTADEVNAISW
1941932..1942405                   PHAGE_Bacill_BCP78: hypothetical protein; Clopa_1913; phage(gi410492966)             2e-09               MEYKNGDIGLDKGIEWISKAIEGFEHSMYSHATTYIDGKLIEAEGFKKTGYVPIDKYKNQLDIFTCDRLTDGQRQKIKEYLNKQVGTHYDYLLILIEAIRYSLHIILPYKEPFKSHICSTLVADAYKSVGIDLCPNIKYPSPADLNQSKLLRKIDSI
1942472..1945123                   PHAGE_Bacill_PBC1: hypothetical protein; Clopa_1914; phage(gi389060344)              1e-06               MIIPYNATLDLKGNNSKIEPIRATVGDSKSIQLNINVVIDTTPADLTGHTAKITFTKSDDTTVFDNLIIDDAINGKMHVVISNQAFAAVGQVNAEIEIFDATDGRLSSNAFAFTARKGELNDGTIISSSQFTALDLALVEVTDFANYRTELTNARQGFTDLQSNLVNKDARLDHLGFDFEQQGGVPNDITKAESNRVLMQSLQDTINTMGRGNIRVSGKTFYMGQNGTNEYSIIGRSGVSVIGAGVGETIFKIKGTNPYSLFWYKPADLIAGDYIENFTYRDFSVDGYEMTITPYSHKGKAFYFQKVRNGIFMNLELLGTPSTALGTDFLHNVHIHNIHCVECGRQWEEAWTNGDTRPAELGPGGAGIGIGTGLLDDESFTISDCVTEQCGHYGIFLEHQALFDPATFTKEAKGVVIANCVTRDGRFAGIGVRGGHNISIIGVQSFGNKHGMYFDAKAGHAELVNWKNITIGHCTFSDNTSMGGYVGGNVTSETFKIDTCTFSDNGAEGLVLGRDGDNHTQKGVSVVNCDMKNNALEGLYIDAGTYFRTLKVMGNTLSYNGGNGFKDSNAQISGGRYINNYFINNTGSGMALFGTKTHLEIKGNYARDDQATKTQQYGLSMSGGALNYSTIEGNDFRRNGTKGMSIADSVIASTSYVRGNKTDENGMLDMPVNSYVSFPSELANFLGATSLSIHVQFRLIAGITGGIEVFHMIVSHTEDDVSSNPKGWDLHVRNTGLLVFEARQATGGTILQRISTTALALNTTYDVIITMNGTTTTMSINGVNETFSSSTGTDADLLTAMQNNNTTFPVYLKGLYYNGTLKNGGAARVGIFNVSKTISGATSNTIYGFDNYGVSRDVYDISSSSPGLHGTSTFAPVQIDNFL
1945177..1945869                   PHAGE_Lactob_prophage_Lj928: hypothetical protein Ljo_1423; Clopa_1915; phage(gi41179332)     2e-11               MFGFTEIERYGDLRRLTNKWYRKRGVAFGDSITVGYLTTNGGYTAYVKQALVLTAYDNFAISGTPMANGTAQNGGVGTNGTIKTKNFATTNYDFVTIASGTNDFKLNVPLGTLGVMGDTTFDTNTFYGAYRDAIEYMLGQSPTMKIILLTPLQRDNSSYDVNYTNTAGAKLIDYVNAIKNIGEMYSLRVIDQYRFSGISKKNLSTLTADGLHPNDVGAIYQGKYVTNELR
1946098..1946319                   PHAGE_Clostr_phiSM101: hypothetical protein; Clopa_1916; phage(gi110804030)          2e-05               MNNEIVELKINEHTETLENHGERLSTLEKKDIKHDDNIGMLCEKIDGLIKLYNKMLLAVLGGMAGVLIKILFF
1946338..1947210                   PHAGE_Thermo_THSA_485A: glycoside hydrolase family 25; Clopa_1917; phage(gi397912616)     4e-27               MKGIDLNSANNVSNWNLVAKDGVQVLINKATEANFYQDKYLSYRYNTVRSLGIKMGVYHFAGKHGVENEAQYFLNYIKGYKFDTIVFLDIEQPPASYGWSWTKGMAIDYVNKFVAIINKAGYEVGIYTGEYFYNDFLRGNIRSDLKLWIAKYSSNPPVNYPNISWQFTESGHVNGVDGGCDVNYFNENILLNGNNVNPAPQPSININNIQEDVKMNPIRMGENSPRVKLLQSIMKILINDGISIDRAFGQQTYNAVVKYQQIMGISADGIVGVNTINTLLNDLKVGWFKA
1947222..1947365                   hypothetical protein; Clopa_1918                                                     N/A                 MIEIILGVSIFFNIFLYCKKQHYINQVIETQRSLQEKELECNLYKNK
1947380..1947580                   small integral membrane protein; Clopa_1919                                          N/A                 MNKQILIKNLKSKTFWVAIGAFVLYLLHSAGVGVVDTQYNDIINAVLQLLVLMGILNSPQIDTEVK
complement(1947687..1948283)       transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; Clopa_1920     N/A                 MLEQKNVGILLFNEVEVLDFAGPFEVFSITTYTECNQKPFKVTTVAQTKDLIKAHNGLKFQPDYDFYDAPQFDILIIPGGYGAEEIEIHNPKIINWIKKNMNNVYIMASVCTGAFLLAEAGLLDGKQATTHWMDIDRLEKEYTKVRVQRNVKFIDETPIITSGGISAGINMSFYIIKKLLGEEIANATAKRMEYDINI
1948549..1948845                   hypothetical protein; Clopa_1921                                                     N/A                 MKKMDEMEMSINLNAIKWSHIFTSVSLLVWSVYDFTHTNKPSLAFFILIMSNLIYFFISQISKWKMGDINGRKAIIHYFIGTILIILILGVLAHFFPK
1948859..1949053                   PHAGE_Thermo_THSA_485A: transcriptional regulator, XRE family; Clopa_1922; phage(gi397912660)     3e-07               MKNNIKKLRKQLGYRQEDLANTLGVTRQTINAIENEKYNPTLELAMKLARLLNTTIEELFTLDS
complement(1949700..1950161)       PHAGE_Macaci_herpesvirus_3: rh152; Clopa_1924; phage(gi51556608)                     9e-08               MNNKTKIMKRKGLSRIITACIIAVGIGSLFSGCGSTTASKSSNSTNTANTTAQTTKATTTSNNNTATDNSSNNSRQANSTNSTPQNTTSNTTSTKKQTSSTVNSNPVVYYLKGSKTYYLSKTDAALKKSKNILSITLKQAKVAGMHQSTSKTS
1958233..1958245                   attR                                                                                 N/A                 TATTGATAAATTA

#### region 4 ####
2525624..2525645                   attL                                                                                 N/A                 TTATGTTTAGAATTTATTAATC
complement(2530985..2532709)       PHAGE_Geobac_virus_E2: putative recombinase; Clopa_2497; phage(gi148747753)          6e-37               MKVAVYGRVSTEDQKERSTIENQVTFAKKYCDLHELDIFKIYKEEGISGTIPLNERDEGKKLIEAAKNKEFDTLLVYKLDRLGRSARITLNSIYELESYGLKIKSMTEPFDTSNPSGRFMITMLAGVADLERETILERMWHGANRAARDGKWLGGIVPYGYFVNDDKYLEINNNIIEDINMSEADVIRLIFELVANKGYSTIKVCDYLNLLKAPTSYIKDSRVKLSKGKRKEATAGIWRPNAVRRIIINKTYMGIHEYGKRSKKENREIITRHVQAIVDNEVWEKAQETLKSNQIESMRNSTREYLLRSLIKCSNCGCTFTGVNYRKRKDRKDGAYYVCCGKQNYKGPFNGKCSAKNLPAAWVENYVWDDVVNFIKHPGEAINQLEDNLEIKKSEKANIIKQREQLLYNIENKDNEKQSILDLYRSKLINNKDLEIQLNKIAEEINQSEILIKEIDKDLQSQNSIEAKFDSVEELLSSLRLIINKEDITFEDKRYVILSLVDEVKVTTLEDDLKHKYAKIDISYKFDAKKRGNVKSIKRTLALVAIMLQIKSVRVQHMREKDILVSFQIPFLIA
complement(2532825..2533682)       phenazine biosynthesis protein PhzF family; Clopa_2498                               N/A                 MKFFHVDVFSSKTMSGNGLTVVFPEQPLDDEILLKITQEFRQFETIFIFERNESEAFPVRIFTVDEELTFAGHPILGASAVIHNLFFSSENIARILFDISGRTVNIKSKKSEGIYNVTMNQGSPKFIQKIEKNAYSEIAATLNIREYDIDENFPVEVISTGLPYLLVPVKDRLSDTKINDKNFENFLSNFGAKFVYVFNPETLECRTWDNNGTTEDIATGSAAGPLCAYLVKNKLKKIDEIINIHQGKFVNRPSIIQGWVSQALGKQEVFISGKVTFFASGNINI
complement(2534170..2534607)       hypothetical protein; Clopa_2499                                                     N/A                 MSKLINSFVTKISESNPEFSDLDLKKMEYGLICAFDEITKLVPYFIVFWIFSLQKYYIVALIFFCPIRLFSGGYHAKTYWGCFFISLIEFFMIIICGKYIMINNAIIIILLVISFIFICIFSPVDNINKRIKSENRKKNLKIILY
complement(2534604..2535932)       histidine kinase; Clopa_2500                                                         N/A                 MDVIKEIVLDSIESFLLLGIFQTLYNKKKFIIQNKLKSILFCTLFVFITYWSTFHIINIYHSLIITLVGILLLAYITRTRIYISAVVFFLFLIIISITEYFTETIEMLVFNVDLNQIFLNPKYSVIFIVTSKILQIIIVLLFFKFRTYFTKFKLFEKEGILFSNLIIQMGIFGLFVFSINFGIFNIKNIKLFNFVIFIVYFIFLLLQLNELKEYRRFVNIEARYKIQEHQIKNMEEMLSIIRQEKHDFANHINVIWGLCSLNKPNAVEQIKKYVIGISGTLHSSFKYIDTGNDCLSALLSIKNSYAVKNNINFNVIIDEPFSSIEINENDLISIISNLVDNAFEAFQLKSNIENKEISIETFSESNKFFIEISNNGDMIPEDIQDKIFDRGFSTKTKKSQDHGFGLYIIKQLIKQNNGNIFLESTPERTKFMIEFKMKELNK
complement(2536031..2536174)       hypothetical protein; Clopa_2501                                                     N/A                 MKTIKKLLTVKAMKAIGTAALFLGTLVIVPTSTLSGHQPKCPDELLK
complement(2536296..2536442)       Spo0E like sporulation regulatory protein; Clopa_2502                                N/A                 MCKKLEKLRDKLNRMLDSDKYTYEEILEVSQKLDKLVVDYYKSHENQI
complement(2536606..2537412)       PHAGE_Mycoba_Myrna: gp260; Clopa_2503; phage(gi203454821)                            4e-05               MYYKDTFNSLIKNSKLKRSYELSMALLSIIIIIMIILEYMNTLSLKETEIMDITDNVITIVFAIDYFTRLILSKNKKEFFKHNIIDLIAIIPFNSIFQVARILKITRLARLTKIFKVFRLLRVFVLLEKFKKNMDDFFKTNNFHYAVWITFTTVIIGAVGMYLAEGRSFTDSLWWSFVTVTTVGYGDISPSTTSGRIIAAILMLVGIGFLGILTGTISTFFIKQEKEELPSLKNETIEMIKSRLNNYENLTNDDLDFICNLIQSLKHE
complement(2537420..2537866)       PHAGE_Phage_OH2: predicted Zn peptidase; Clopa_2504; phage(gi526118363)              2e-31               MRKVIKEEVERLIKKHKTNDPFEIAASEHILIFEEPLGLINGYYNKFVRQKMIHINSNLKDHKFKKFFTCAHELGHATIHPNANTPFLRNNTFFSIDRLEIEANTFAVFMTIPEDLLFAYEGFTCEQISKAEDIPVQALKLRFMDLLR
complement(2537889..2538323)       PHAGE_Geobac_GBSV1: immunity repressor protein; Clopa_2505; phage(gi115334658)       1e-25               MATFQERMKEIRTEKDITLEDLAKALNTTKSTLSRYENNLRVPNVDFINQLAKYFNVSVDYLLGNTDNPNIKNSESKLTKKDEKDIQKALSKTLEQLESSQDGLMFDGEPMDETTREMLRISIENSMRIAKEAAKKYTPKKYRK
2538479..2538715                   PHAGE_Lactoc_bIL311: ps3 protein 14-like transcriptional regulator; Clopa_2506; phage(gi19343481)     1e-06               MLIKKQANFKLKGLRASCNLKQSDIAKELGISESTYNRKENGYADFSETEMWQISKILNKEPESIFFSNIFFDNKVAK
2538768..2539256                   hypothetical protein; Clopa_2507                                                     N/A                 MSKKATKAADNIYYKARMEAAATNDKLNSREGAAELLGIDRTRLAHIELDSVCAYPEEILMMSEIYNTPEIENYYCCEQCPIGKHNVPRLEVVEIDRLTIGILSSLKDVTSIKESLIEIVADGVITEDEKPQLEYVLDSLERISIEAQKLKLWAQKNLKLII
2539282..2539455                   hypothetical protein; Clopa_2508                                                     N/A                 MGKLVRVETEHVKVGRFEAFVTKKFYDGPEEREAQVRALKRIKSLIGREPQEGAKDV
2539448..2539657                   hypothetical protein; Clopa_2509                                                     N/A                 MFDTKNIKGYYKLNCIDKTVFDSFLKRFYEAWEYPEEHKPVSVKVQKEFIRVDLNDGSWLHVKPNGEWY
2539667..2539882                   hypothetical protein; Clopa_2510                                                     N/A                 MNLNKYQKVISKIVKDDMNARFVRASFREIRTEVRDFVKLMNYDFNELVEHKNRSKEMNIIFSKFNKRKVS
2539883..2540041                   hypothetical protein; Clopa_2511                                                     N/A                 MPIKVEIPTHKDALIKQIKALEYKIEHDTNKRAREIHQDAYNALMEEYLNEE
2540031..2540171                   Spo0E like sporulation regulatory protein; Clopa_2512                                N/A                 MRNKIEQLRAELHEYIEKYGFLDQRTIEKSQELDKLILSEQIKKSS
2540248..2542209                   PHAGE_Lister_B054: gp49; Clopa_2513; phage(gi157325333)                              3e-108              MSNLIILKNLHLKNFKGIKELNFTFDRITNIYGDNGTGKTSIFDAFTWLLFDKDSQDRTAFEIKTLDSKGEAIHGLEHQVTGTLEVDGKNVILSKILKEKWTKRRGEAERHLTGHETLYYINEVPVKQSEYKSKIASIIDESLFKLISNPTYFSMNLKWQDRRQTILNIIGDIDWNRVITYNPELKALVPALNDMDIDTLKKSIAARKRKLNDDIKSIPYRIDECNNSIKEIDFDALEFRKRVAIGEMKNADEQLLDTSKVNDSLLAEKDELYSLKDKMKDIEYNAKIEAENPRKLLKESIYNIHDKKLKIDREIKLTDISIDAKKKAVEDFQNEMNKLRTGYKNVAAEEFEFPEDQTICPLCKRPFDEEHIEETRKTLEENFNINKAEKLKKINQQGKSMKDKVEVLNTDVQELNEKSMILSAQALEIVADLNETEDKYQNFKPELNLESNIEYQELKSQIEQLELKLSQPKELNNQVNDLKDRKKKLQQELEDINTQLSYKEQNEKMKERVAELTDQESALAQQIAQLEGQEFLCENFIKTKVELLENSINEKFKFVSFKLFNTLVNGAVEECCEALIHGVPFSNANKASQINAGLDIINALCNHYGVEAPVFIDNRESINEILDINSQIINLVVSQDKKLKVSNIQGEVA
2542211..2543161                   PHAGE_Lactob_LF1: RecT protein; Clopa_2514; phage(gi418489428)                       5e-57               MPNSVQNTNNKALTTQEKNITEEVLSRVNDLSKKGELVVPQGYSAANALKSAWLMLQETVDREKNPVLQVCSKATVANSLLDMVIQGLSPAKKQCYFVAYGKQLQLMRSYMGTVAVTKRLKGIKDVKAYCIYEGDEFEQTFDLDTATLKITKFDPKFENIDLTKIKGAFAVVLGDKGPIYTEVMNINQIKKAWGQGVAYKSGKSTAHNNFTDEMAKKTVINRACKMFANTSDDSDLLIEAFNNSDEKQYDEDKIINNVQAEVNQEIEEKANKKTLDIQEDNVKEKVIDVESKKAEVSNENENAQQSAKQTEIGLEF
2543171..2543911                   PHAGE_Cellul_phi13:2: metallo-beta-lactamase domain-containing protein; Clopa_2515; phage(gi526178219)     7e-54               MKLKVLGSSSSGNCYLLQAKEETLILECGIRYKEILQGLNYKIDNVNSCLITHSHKDHSKAIKDIIKAGIDIYTSKGTIDACEVSGHRVHIIKSEQQFKLGEFTILPFATEHDAAEPLGFLIYHPEMGTMLFATDTYYIQYKFLRLSHILIECNYDGEIMTSNIDNGTLNVGLALRLAKSHMSLDNCKTLLKATDLEDVRNIVLIHLSSLNSDSELFKTDIEKLTGKPTYVAESGLEIDLESEFDG
2543904..2544092                   hypothetical protein; Clopa_2516                                                     N/A                 MGKRLNIQIDRAKELYEKYGTLARAALSLGCSPTTLKRLLIENGVEIKPYVAKRWNVNSIRY
2544158..2545021                   PHAGE_Entero_EF62phi: dD and phage-associated domain protein; Clopa_2517; phage(gi384519772)     5e-22               MKETYYFSHDFNARNDPKILAMRSKYGSEGYGWYWMIIEILREQSEYKLEHNKYLCITLAMQLQCDCNALHNYVEDCINEYHLFESDGVYIWSNSLMRRMEEKATKSENGRKAAKARWNKASKDKKDVKKCNENASAMHTQCDSNAIKESKVKESKVKENKREREDNSHTQEALELCKYYSELKPGQDITSDLASLEIFIEIYGFDWTKEAIQKCVSGKGKFIKPWVETVLKNWVQERKGENNGAKSNKQNNREDEVAATGETEGAELTKRALEKYGGTLGVVECDI
2545002..2545769                   PHAGE_Bacill_IEBH: DNA replication protein DnaC; Clopa_2518; phage(gi197261519)      1e-19               MLNATSKCPHGKCDGSGMMWLRNPETLETKAQYCTCREQKLQNKRLAFANIPKEFSSLTIKSFDSEIYKNKEDVMRARIAKKQAVKYVNSFEEEFESIGKGLYFYSATKGSGKTRLAVSIGNAILSTKHKQVKFVTSLDILKEIKNTYNRESKYTESQLIESINGVQILIVDDIGVEQPTPWVNEILFSIFDTRMKYNRVTIFTSNCSVENLKHDDRLRSRIFKMAIPVEMPEEDIREKQSKDQNREMQDLLLAE
2546452..2546706                   hypothetical protein; Clopa_2520                                                     N/A                 MLEHEEKCWYNPQNRTCITCKFGELIDDSCDHDELPGCPTEHWRYRICHEYHGEDIEFPKRKATGETVIPIEHCEYWKIKESIK
2546703..2546900                   hypothetical protein; Clopa_2521                                                     N/A                 MKATQYSAELIKKDGATYTMFKIGHKCGPRIKELLFCLNAKLVKETKTYTAYELKGDKISLFMII
2546914..2547333                   PHAGE_Staphy_StB20: hypothetical protein; Clopa_2522; phage(gi431809750)             3e-27               MSKYRAEKVTVDGIRFDSKDEARYYQDLKKRKVAGEIINFELQPKYELQPSFKKNGKKYQPIYYVADFLIYHNDGSLEVVDVKGMATPVAIQKRKEFDYHYPELKLSWITRSLKYSEDGWIDVDELKKIRAKNSKRGVS
2547335..2547982                   hypothetical protein; Clopa_2523                                                     N/A                 MPKIKIIDETTGEVTDIECVGYNLQFVESTGNGVIQKIRALNNGKYGYKHWIKNDFYRPIAQKIKDKYKEKFEEFTMINLDKILFIEDTEYIGDELKRSDEIMWIKKANKQLEEVTGYKFIIESREFWVERISNEQVVALIYSCLRQIENGYKIREPDLVGWKEVIGTLGYGWETTKSEIPNLLDGFNMNDFKMLRKADKQVGFFDSKEKYYEQG
2547995..2548774                   PHAGE_Bacill_phBC6A51: hypothetical protein BC1869; Clopa_2524; phage(gi31415763)     1e-44               MGANWTEEECNFLEDKWGTISIPTIAKSLGRTEIAVKIKAHKLGLGRHLYSCEEITISQLVKVLGAHYTWAVDKWISYGFPVKYKKSVSKKYKVFKLEDFWKWAEQHRDILDFSKFEKGMLGIEPGWVKDKREADIAAAKYIKTPWTEEEDNMLMNMLNSYKYSYQDISDRLKRTGGAIKRRMVDLRLKQRPLKADNHNPWTNEEIKILLNLRHKGFGPEVIAKKLGGKRSSLAVRGKLERMGLIGGNGESRTVISTRH
2552831..2552852                   attR                                                                                 N/A                 TTATGTTTAGAATTTATTAATC

#### region 5 ####
2552095..2552643                   PHAGE_Bacill_BCJA1c: hypothetical protein BCBBV1cgp27; Clopa_2533; phage(gi56694895)     6e-15               MEERISIDEAVKIGVNAGIKYIKEQEYYKTKKRYDRRLRNTRLLLNHYRSLKIHGAMTDSSINAIYHDNAIDVLDDVESIHDEEQYIQALSRTKKRTLIIVGHINKSMKYYEAICKSDGKLKERRYKIIKYIYIDPIKDDIQPTYEQAAEHFGIAVKTVGRDVRNAIEDLSILFFGIDGIKL
2553088..2553303                   hypothetical protein; Clopa_2534                                                     N/A                 MQSIYTAFKCRTCKLEFILLSEDIDKMSKDRYIACPYCNSKRVNKEQEADDLREVMRERSYRRIGGALRQK
2553367..2554179                   Protein of unknown function (DUF2971); Clopa_2535                                    N/A                 MNENSTNNIIAVHKYLTFNQFVDIIELQRSYFTNVPLWDDTYEAASQYEIFNQIIPLKMANSFAKDENSMDQIKRMLKIQIKDMYAQSWTYDSKESDAMWRIYSPDKTGVRITTNVLKLKEQMKESLEKDIEDYEVSYDLKMNADKYKQKGTIAGYITSGRAILEGKRSEFVHENEYRFSFSLNIQEYIGSIKCEGEEPTFNEMYNFKREPVKYYKFPLNLISEVLLDPRAPKYFEETFNNYCENRKFKENNIVFKKSDLYGDPSEKLFK
2554208..2555176                   PHAGE_Bacill_PM1: hypothetical protein; Clopa_2536; phage(gi472438297)               5e-51               MPRQRSPNRDKAFEIYKEYNGNIDLVKIAEILNISPGTIRGWKNKDQWDNKLNGTLQKKDTKKVKNTERSKRKKNNVNKEPEFEEVTEILNSELTDKQRLFCVYYPRCFNATKAYQKAYECSYEVAVVNGSRLLGNAKVKEEIHKLKQDKLNRAMLNTDDIFQKYMDIAFADITDFLIFGQEEVPVINAFGPVLDKKGNQVTRMVNTVKFRAWANVDGTLISEVKQGKDGASIKLQDKMKALQWLSDRMDLLTIETQRKLQLENEKVNMAKERLQLDKDKNNSDSNETNKDGIKEFIEATTMTEEQIKELFKDDENEKEEET
2555154..2556425                   PHAGE_Deep_s_D6E: large subunit terminase; Clopa_2537; phage(gi423262329)            2e-138              MRKKKKLKGFRFQPFSLKQKKLMFFWEKGSPFADKDIVIADGAIRSGKTIACICSFIRWSLKHFTGENFILAGKTIGSLKKNVIGPMQQILKSWNLDYTYNRSENFIVIGDNTYYMYDANTEASQDKLQGLTAAGALADEGALFPQSFIDQMIGRCSVDGAKIFINCNPGSPYHFLKTELIDKAKEKNILYLHFTMDDNLSLSERVKERFRRMFSGVFFKRYILGLWVQAEGIIYDMFDEIKHKVKTIQRAYKEFYVSCDYGTQNATVFLLWGKSLDKWYLVDEYYYSGRDKGKQKTDNEYYEDLEKFVGERRIKAVVIDPSAASFIALIRSKGRFSVKQAKNDVLEGIRNVASALNDSLLQFNDKCLNTFKEFFSYIWDEKAIQRGEDKPVKVMDHAMDALRYFVNTVLYRNITGPLQVKNL
2556435..2557934                   PHAGE_Staphy_StB27: portal protein; Clopa_2538; phage(gi431809707)                   8e-08               MLTDLNFLNPGQLWPPPAENERLNQYNLNRLIFEGKHDVVYAEQFKRIERIIGNFQNVVSYAVICNFQKLISLKVADLLLGEEPIIQTGDTKSNEQAAIKNISDNGGVNNISYQVALDLSRYGDGLFYIYKDKDTGLGKIDVTQPSIWFPVVDPSNLKRIQYHVLAWTYNQVDDNIGLINKILNGKSQLNKHLKVQIHYRGNYEERDYILKENKIVQQFGESIVVQTGLDDFAIVPVANVLTSDRIHGMDDYMDLDNILSEIEVRLSQIAKILDRHADPSVQGPASALQQDPETGEWHLKMGNYFSRDSNEDPPVEYLVWDASLQANFTMLEKLINILYTISEMGPSILSAGQLDHSSGTAISGTAIKLRMVSPLAKVRRVAARFKPALIKSYKLCSQLGGEGIINLSKTTISVTFQDGLPKDDLELAKIMQIRTGNKATISQIKAIQMLDDMTEENAEKELEAIREDDNLASPLSNGNNPFANSNVIPPEDPPVNGEK
2557934..2558971                   PHAGE_Bacill_PM1: hypothetical protein; Clopa_2539; phage(gi472438306)               3e-28               MDDLSKALIEIYTAAQQSIIDIIIEKEAKGNVTTYQKSLFVQIQEILVKLDKSAWQWSNDTVETLYWQSVKDVNDYFDITSFSKLNTAAIDILAKNTYTKLNSANVYVGRRVEDEIRNAGLKAIAQKLTTGETVRQCKQNLVNSLIDKGINGISDKNGRQISLDAYAATVAISTSAEVTNTATVQRMTNLDKDLVKMSEHATTCPICSTYQGRVYSISGKDARFPPLNTVPGFSSGFSNIHCRCKHRVLPYVEDLATDFEGDLKDSNRSFEISDKDKKNIDAYQKQQATQRQFLQDKNQWQRYRLALGDDVPKTFSAFRRMKIGNTEKFQELQSSYRSLRQGGEG
2558971..2559294                   PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp5; Clopa_2540; phage(gi304360667)     3e-20               MNIPESVKIGYKIFDVNKIETNVISDNKVCYGEIQYDNGIINISKKYSEDQQKCTFLHEVIHGIDDIFEIGLEEDQVRKIAKGIYLLIKDNSEIFMNNTFDKTQPLK
complement(2559313..2559495)       hypothetical protein; Clopa_2541                                                     N/A                 MGKIKSGQPAPKSGQYEIIGPRGGHTGQEVTLPKGHTAPPTPKPGQSYNIVDPTKNKSGR
2559599..2559766                   hypothetical protein; Clopa_2542                                                     N/A                 MNVGSIVKILDNNEWHNLYGVVKYIYKGIAYIFCVQYPTYLYVAKPENQIIIIEE
2559824..2560492                   PHAGE_Staphy_phiETA: similar to phage phig1e RORF204 (minor capsid protein); Clopa_2543; phage(gi17426271)     6e-14               MADLKEILGEELYNQVKAKEGDNKIAVVSDGSYIPVDKFNSINDTKKGLADQVKNLTGQIDGLKTTVDEYEKLKPQLEAMKTAAGENPLLKKQLEDLQEQLGAYPKQIEDLQNENKGWSEKYKDTQITSAIKLGLLNAKVKSGYEDLLLPKFDKTKIELDEDGTVKGFDDQLKVVREGFKDLFVEPIPGNSGANPPGGGNEPPKDESKMTDTEWFAAHTKQQ
2560517..2561632                   PHAGE_Vibrio_vB_VpaS_MAR10: major capsid protein; Clopa_2544; phage(gi428782119)     1e-30               MANNFLTAQMIAREALLRLQSNFVMAGLVFTDYSSEFKELGDTIQVKKPATFIADEFGGTVNLQDVGESSVLVKLDKIADVSVEVGSKELSLNIQDFGAQILDGATLAIAEKVDQDLCGLYKDIPYFSGVGGTTPAAVTDIANAMLVMNKNRAPMASRNAVWDPNAQAKLVSQDFLVNANKSGSTDALRNASMGRIMGFDNYMDQNVKTHLAGTYTSLTDVKAAGTKGTAAVTLTSTAGTSTGTIKQGDVFTINGNQYVAKADATAVTGVISNLPIYPKLPSDADVVAVPVTFGKSHVASLAFHQNALGLVSRPLEPPMGGATSYVATSPNGLSLRVTMGYDMTTKRNMISIDTLYGVSTLYPELATRILG
2561659..2561844                   hypothetical protein; Clopa_2545                                                     N/A                 MGELKCPHCGELFTNPELFRHHKNNCLKVQEINGVNYKTDDPGEEKAADDPSKKNRNRGGK
2561847..2562110                   hypothetical protein; Clopa_2546                                                     N/A                 MLGKPLYTGTRSSNGIETTAQANTLIDFIPRLIDLKFIAVTACSVKINNESNAHYLRVNDVLELKNFPINSITIAESGAQYIYHATY
2562122..2562652                   PHAGE_Cyanop_MED4_184: hypothetical protein; Clopa_2547; phage(gi472340560)          3e-10               MVELIVNTNTYISVADADAYFDDRLFSDTWDNTDADTKAKALIMATKKIDRLPIIGRKAIDSQTLQFPRMIYSYNRDNLFNSYFVTQEGNKYITNSIGWYTEDFVSNRVKYATCEEALALLERGNSKRIKLQQQNVKSFSLGGGISETYGNRIVKILSEEAQEYLQPYRTTSIPIF
2562664..2562969                   hypothetical protein; Clopa_2548                                                     N/A                 MGDILDEYLNQTITYEKYKQSDGLGNGSYEATIDLPCRIEDKIKLVRDKKGNQVVVNNTIYLKGSALTLNVEDKLGGRVVIAVGTITDLDGENVGWLGYTQ
2562966..2563436                   PHAGE_Bacill_PM1: hypothetical protein; Clopa_2549; phage(gi472438315)               2e-10               MSSKFEITFTGFEEVLQNLDSLEEAIDKEVKQAVMDCGLDLQKVASELAPLLESDLQGSGNTTEENNGQGYTVKVTFDSPYAKRRHEEPYRSGVHKEYNSAGVYVGDIIDGRGPFTRSKPAIDGMAPGRKYLERPLKKYEQKYQDYVANKIKGVMK
2563433..2563810                   hypothetical protein; Clopa_2550                                                     N/A                 MIVEDIAKYLAQQGLGEFGTDIFGMAFPKDTDEGVCIYDGISGISDTYCIVDNPAIQIISRSSNSITANDKAIQAYKLLHGTIRSKQIGNTFIYQCFATGYPESIGRDANGLWMWSMNMNLQIKY
2563822..2564616                   PHAGE_Bacill_PM1: hypothetical protein; Clopa_2551; phage(gi472438317)               4e-17               MPILSDTRIPFGVCDIYVDGTKLGIQADKAILKIVPTFKSIKVEDFGDGDYDKRLSGYTVTFDAVMGTESAENLRYGLVAAEIVNGTKTAYTDAQIGTSMRSSYGKPLRIHPRELADDNLDYDANIFLAIPSTQYERDYSNDQSKVKISLDALPKNGFDVSKPENFFRIGDPGLTAAVPTISSLNKTTLAASTLPTVLIVTGTNYVSGSQVLITTGGTTVTAISITYDATHLTVMLPASLTAGAYTVQVKNGPATSTTTPLTLT
2564672..2565094                   PHAGE_Bacill_PM1: hypothetical protein; Clopa_2552; phage(gi472438319)               7e-05               MEITIKDKKYNIDEITVKDSQEVFKRAVTLISKVATNKVIQTFIKGIDKSMDTQAFLIQGAQLLPVLLNLAFDDTIGLISCVANIPQDELENFGISKLLLIIEAIAKENDIAGIIENLKNSVGAIKATLKLSAPLATSAL
2565373..2568930                   PHAGE_Entero_phiFL4A: tail tape measure protein; Clopa_2553; phage(gi281416482)      6e-37               MNVGEVVASITAKLDGLKSGMAEAKNLFSNNMNGMKTAASSLNPTLQTMDNGVKNTSNTLKQLGESNQAAKNAMNNFDSSLKSTAINVENLDKKQQLWVVNNKSSASALELSDRALETNKLKLSELASQIDKGKTSLISLKDTLGSSSVQYKSTENAVMDLEIKYKSLTNETKILENENKQLQASANPGFFTRMKSSIVGVKDSTAEAGETVRNAGEKTKTSIIGSAQSLIAWSSATIGSAMGAYRLADSASNLGEAQNVVEQTYKSSAKSIEDWTSTTAKSAGISQTASTQWVGFMGAMLKSSGVAEQSAGNMSKSLVQLTGDMSSFYNVGTDDMWEKIRSGISGETEPLKELGINMSVANLQAYALAAGIKKPYDQMTQGEQTTLRYNYLMNVTKDAQGDFGRTLSTSFANQVRVAQMNLGTLGRSIGEGLLPMFNDGVTAFNNFLPAIQNGMTQGVAFIKNGIQTLGPIFVGIGQDIIHIAQNILPNFSSSGQSTGQVIMSLVKGGLTDLKGILDWVANHGELVRAALIGIGSAFAVFKTASTISSTFQAFNAGVQGLQTATGAVSNFGKAFTALNTAGPILGRLKGAFTAIFSFNPMLLLIIAGVAAFAAVVYLVIKNWGPIKAFFGNLWTSTKETFNAFWNWLKPFITTWGSVILAVLLPFIGIPLLIVQHWRQIKSFFGNLWSGIKQGASSGLNGLGQFVTGIGNAIKNGVNSFATGVKNTVTSMGNSIKSLFTNAWNGARSIVLGIVESIATTIMTRFGWVITNIRTIFSALRAIFTSIVSIMRTVFLAPILLICDLIVGIFTGNFRKLGQDLRSIITSIVTNITTIFRSLILIFTVIGNTITSLLTMAWIKIKFTALQLCNELVLGLRLLWINFVSFITGLWNSIVTTATTMWNILKTTVINLVNALVQGAINIFHNIINFFVSLPGTLLSLATAAFNAVKNAFISIGTSAVNGAINIFNGVVNFFMNLPGRLFSLAVSAFNAVKSGAQSALNGLGSIISSGFNSAISFITSLPGKAFTWGSDFIQGIVKGIKSAVGSVVDAVSGVADRIRSFLHFSVPDEGPLADADTYGSDFMDLIATGIDKGKVKVSNAVNSIAGIMNKGIKVGSNLGVGNITSGISNLTQKISSGVNSLGSSNQPIVIQLMLSNGKALAEFLLPDLDNLQGQQIKLRARRQGL
2568927..2569649                   PHAGE_Strept_5093: hypothetical protein st5093phage_28; Clopa_2554; phage(gi238801908)     1e-09               MIPEIIYNGIGSYSEFGAILNYFHPQPPTPKAIEDSVPGMNSTYDFSNLLSGGEPTFDDRKIQCSLEFVGRTKKELYSLYGRLLTWLMLGTRHPLIYSEDSELHYNAKVSSQTIPTFEVFCALGGTLVIEFLASPYRVGNTLYGNLLWDDIDFDLPDYIQDTQFDVVGSKTVTIYIPGSNHSIVPKVVTDSSMTCALNSYTATFNPSTSIDWGFKLKPGANTIIITGTGSIDFQFQKEVL
2569724..2571856                   PHAGE_Lactob_phiJL_1: hypothetical protein phiJL1_ORF249; Clopa_2555; phage(gi62327115)     2e-34               MGTLGDTIRVQSAKEVRDGIADFIDIVEQLIINAGASNAEIVVGRKSNVTGQIFDTIGHRIDGIDSQFITIAAQLISKLSKSDIQNLIGFADINKNLSKIDQTMLADTLLQQIAGTAPINAVPADGSITKIKLANGAVGIEKLSPDLFNDTLIQSDIEASFSNARSYENAYPMKFVYTIPAGLTLSNITAKCKFKTDSSNITQARLKLLVGTDATIGANLTTPAFTPITSGVETELTVTRSNSDTGFTNIVVFVYAWGSNIALPASYLISNLELYINGNLTEYTAVLDEAYSNAYATCTFNYTGDKLALERDVDSLNTDILNLNESVSKAIKSKVTDNLAQFSNGRTFENSYPLKFNCTVTKPYSTIEARVDITSKNANLFQGRLKIYFNNSPTDFVLGNFSTLTTGVEKNLSVIATRASIQTVTVYIFLEGTNVSLPSDYSFKDIKILLDGVEDDTITFTWDPTYGASDMTVTMTEGGKYILTDWNNNPVPLAVEADVENLKTKTIDTASSPLRGKILNMIGDSYVYGHTLGSDKVSYARIAVKYGMTYRNYGINGNTISTVAGGSGTPMVTRYVDMDNNADYIGVVGGRNDYNMGAPIGTNTDTDPSTFKGALNILCEGLINKYIGKKLFFITCWNVNDAMMAYSDAELEICGRWGIPCFDASRYSGVFMRSESFRTQYCLSSTDPSHLNEIGHEYVKPKFEAFLHTL

#### region 6 ####
2763108..2763122                   attL                                                                                 N/A                 TAGTTTTCTTAATAT
complement(2763462..2764469)       PHAGE_Lister_LP_030_2: integrase; Clopa_2774; phage(gi514051961)                     2e-11               MNKDVKKYSLDYKIDDFMIWCQQKDLRIKTITSYESCLRLFARYMKDEHGIDNINEIKEQHIREYIKYTKERGKYTFVSDKNSLRINYPENRKDYNSKISVTTINNYIRNLKVFFNYMEEEYNLKNNPMKKIRQFKNSRKPKEAITDAELKRLLQNIDTTKFHEYRDYIIIQLLIDTGMRLNECLLLEIENLDLDRRAILIPQDITKGRKDRYVFFSRSMGTQLKRWIQYKDRYIESELLFCTKHNTRLSVSNFEKNFRGYCGRAGLKNVTAHCLRNNFERNFLINGGSIHILSKLLGHSSVTVTEQAYADLSDEDIRKAYNKISPIERIKGGRK
2765083..2766177                   spore germination protein, amino acid permease; Clopa_2776                           N/A                 MKEKITSYQFLAIMFLVPYGTASLFFVTPDTKNDIWIAMLFYSLVSIIIQMIYISLFNKYPEDSIVTYLPKIYGKYIGFILSIAYISFFAYDAARDLRDFIELPTSFALIRTPMYIIAAVFMIVITYSVYKGIENIGNMAQLGFIIMIFSIILVFILLSITDEGVFKFYNLLPILHGGFIPLVSKGWKLSMFPYGEFITMIMLYPFLMQKSKLKKTVIFTSILEGIFLALNNILFIVTLGYEFAVSSNYPLLQTLRLVHIGDFLNRLDIIFIVILMLGGFFKISVLMYVSALGISQVFKLKNWGLLCIILGTLIFITSLIIARNNPEHINIGWNFALPYIFLPIVFIIPLISLIIYYLKKLIRA
complement(2766298..2766498)       Bacteriophage holin; Clopa_2777                                                      N/A                 MNKQILIKNLKSKIFWTAIGAFVLYLLHSAGVGVVDAQYNEIINAVLQLLVLMGILNAPQLDTEVK
complement(2766514..2766657)       hypothetical protein; Clopa_2778                                                     N/A                 MVEIILGVSIFFNIILYYKKQHYINQVIEAQRSLQEKELECNLYKNK
complement(2766669..2767508)       PHAGE_Clostr_phiSM101: autolytic lysozyme; Clopa_2779; phage(gi110804057)            2e-38               MKGIDISPYQGNINFQAAKNSGIEIVYIKSTEGRTWQSETFRNYYNQAINCGLKVGVYHFLRANAMIDEVNNLLSMISGLHFDCKIAIDCEVILGQSKQQITSNIRQFHDILKSKGYDSVLYTYSSFLQDNIDYSQLTDVEIWIANYGHNPSVTNQIGWQYSETGSVNGISGNCDLDDFSEGILIGGSNAPQAININNIQGSVTMNPIKQGENSGRVRLLQSILSVLIGGITIDGAFGQQTYSAVIKYQQIMHLVADGVVGINTITTLLSDIQHNWFKA
complement(2767528..2767752)       PHAGE_Clostr_phiSM101: hypothetical protein; Clopa_2780; phage(gi110804030)          2e-05               MNNEIVEIKIQEHDKKIKEHDTKINNLEKCDIKHDDNINQLCEKIDNLISQNNKWLYLCLTGMAGLLVKLLFFK
complement(2767827..2770484)       PHAGE_Lister_LP_030_2: putative long tail fiber; Clopa_2781; phage(gi514051950)      1e-06               MTAIPYNITLDLKGNNSKIEQIRATVGDSKSIQLNISVIVDTIPFDLTDHTAKITFTKADDTDVVDDLVIDGDPVNGKLSYIVKNQAFSYPGQIKTEIEIFDAIDGRISSNSFCFTARTGQLEGTTIVSSDEFPMLTQALAEVTDFANYRTELTNARQGYSDLQANLTNKDARLDHLGFDFLQQGGVADGVTDNRALLQSLMDTLQTMGGGNIYIPDGTYYFSQSGSNEWSIQSHSNVNVYGAGIGKTVLKIGGNDDHYSLFWYKPTVMDGTQYISNVTYKDFTVDGYDVSLVVYTHQSKAFYFQAVKNSIFENLELKGLPSTALGVDFLENVHITKIHCIDCGRLWEENWTDGGTKPAQLAPGGAGIGIGTGFFADENFTISDCVCTNSGHYGIFLEHQALFDSSTYTQPAKGVVISNCITKNGRFGGIGIRGGSNISIVGCQSFGNKHGMYFDCGDGTHSGTIQFKNVNVSNCSMTDNTNYGYYLAGNITSENFTIDSNIISNNGAEGLVLGRNGTGGYTNFGTTVSNNTIRHNTLDGIYIDNNTIYEEIELKNNKISYSGGNGINDVSNQIRHGRFIGNFLLNNTGSGIQLTNQKTHLEIKNNYARDNQGTKTQQYGLSYTSGSGGLGYSTIANNDFRRNGTKSISIVDSAIGSTSYIRDNLTDDTGMLNMGTNTYVSFPSSLANFSGVSSITIEMKFRLVVGIIGGVEVFHMIVSHTEDTQPTNPKGWDLHVRNTGVLVFDVRQSTGSTLLQRIGTTVLTTGVTYDLVLTINGTSTTITLNGVNETFSSSTGTDADILTAMQNNNTTFPVYLKGRYYNGTDKTGGAARIGMFNMTTVTGGVTTNYTFAFDNYGINKTIYDTNIGAVTGSCIGGVKQIDNVL
complement(2770569..2771243)       hypothetical protein; Clopa_2782                                                     N/A                 MTIKVNFKPGGSYDQTDLINQFMSLFSDGVNQGLQVVECSPASLNVNVASGSLMCSGYFFYNDATVTVPIQTNTSGYTRIDTLCVSITDENFTVVQGIPSSSPVAPTISDSMLFPLANITIGNNVSVLNNNTIQIVSPPNEFRIGGLTFKFGKSPFNTNPTGQATANVTFDTPFSNGCKYVLAIDNGGAAYSYGTTGYSKTGFTWWASVSNTLTVAPIYLAIGY
complement(2771267..2772304)       hypothetical protein; Clopa_2783                                                     N/A                 MKIIRIFNKDHVILDELSEYSNLTYTWTLNGLGSSEFDIPLSSSKSNEVNLRFKNHIEIIDENNSITWGGIITDREFQDNKIHVSCYGYLGLLWKHRMRATTYPNMSYGSLLQQMIIDTNTISLSGVSIGNIENGSLYTQRSFTNNDMLLDKVNEIIGDTNNNIEVDNNRNFNFYLHKGSDKSYYTLQYGTQGADNILVAPTLHTSILNSGNSIYSECTVDSNTLTSTAQDQTSIDTYGLIEDAYSAPNNITDQSTLNNVVNGVLQREAYPINNITLSIKDSALCPYNNVFVGDTVNVYLRPYWEFEQKSRILEIKHNESNGLREITVGGSIFRNAKPQIKLYSK
complement(2772318..2773109)       Phage tail protein; Clopa_2784                                                       N/A                 MLYCSEITVDGFSLINNKYKFFINNLFDIDNDVVGTDLRDSGQSYDHTHMKPKTPLLMGSVTSESITDFLTLRSVLLRQGLKKFVVNLAGIGEVYFMAEIVNWSHDDLDSYVSCQLSMPDPHLYMLSPSSVQLGSISGNSLTFPFVFPIVFGAINGGQGIVTNVGNCTSFPLITITGTCSSLTITNTTTNESIYIDVELLEDDVLVIDNRPTSRGVFLNGVPHMELKTGLWISCAVGDNNFTFQRSSVQDKRHCTVELQSSFI
complement(2773123..2773998)       PHAGE_Lactoc_BM13: tape measure protein; Clopa_2785; phage(gi526244864)              2e-24               MASTIAEGAATVAQTALNLAMSLNPIGIIIIAIAGLVAAIVILYNKNQAFRDLVNSVWNTIKSVVGGVINAVIGFFHNLVSGVESAGNGIRNAFNAVLSWFSSLPSRFVQFGSNMINGLRNGISSVMGTIGGVIQNGFNSAISFITSLPGKALQWGADFINGLTSGITGAIGGVVNAVSGVADKIKSFLHFSVPDEGSLTDYEQWMPDFMGGLAQGIDKNKFKVTNAIKGLAGDMKVGLNTNGLNGTQVTNGNNQAQNKTVNINMYGNMNVADKGGQDKTLAQLTFLSSGV
complement(2774020..2775390)       PHAGE_Synech_S_CBS3: tail tape measure protein; Clopa_2786; phage(gi331028021)       3e-24               MKLFSVFGELLLKDSMSSGIDKAGEKAKGLSGIFSASFGSIAGAALKLGAILGVTMGFKDLFAKAEAGQQTMAQMGAVLQSTGGKAGMTQDALVKLADAQSKVTTFSKGTNIATENLLLTFTNIGQKTFPQALTAVNDMSQALGQDTKSSAIQLGKALNDPVKGITALQKVGVTFTAQQKDQIAAMMKTGNVAGAQAIILKELSTEFGGSAVAAGKTFAGQLTIIQNQLIGVGVGIVSKLLPPLTEFITQINNHMPQIQNIIGKVVNFIGQAITTLTPIAKSIIQDVIQIASDLFPKMGNSGSDLGNQLLGLAKGGLTAVKSALDWFAQHGQTTKDIVIAIGIAFGTWKTIEGIVATITNVKNAITTVTTTINNVKSGIDTARIAFMYMGDGVLSVSTRISNFGSSVLDTLGNGLTKIGGLAKSAGSAIIDFGKAAVDGAVSLGKMTLELGKQAIA
complement(2775377..2775697)       hypothetical protein; Clopa_2787                                                     N/A                 MDMLLNRYNDITYVMDLSFVQGVELIGKAKIKMAEDMLFAQWNMEHIFMDEKNFIAFEDYKDKAFKGVNKKKLSKEEIHKMAVKAMEEADKIKKEIEEGGYVSETI
complement(2775748..2776092)       PHAGE_Lactoc_BM13: hypothetical protein; Clopa_2788; phage(gi526244862)              6e-08               MRSLLTQDLFPLTRIVKKMNIKNDIKAIAKDLSGLSDEEKLKVKDSLNIDLMMLFIENIGSAEKEIYKLLSNLSGKTEKEIAEQKLIETIDMLKEIFNDDQFDDFFGVAVKSLH
complement(2776160..2776717)       PHAGE_Lactoc_BM13: major tail protein; Clopa_2789; phage(gi526244861)                1e-10               MNSTDTNSFTSNTVKNLAIDAGCLYINYGDPTERKLGATSSGSTFTVKATTRQCKVDGVKGSAKGLEFVTNTDVTLATNILEMSSSTIATLIRGDVDTTDPDYDIITGRTSISNSDYLINIALVGKISGSLKPCIIIVKNAMSSDGLKYVLKDDTDNVVQATFTGYIDPATPDVLPYEIRYPKIV
complement(2776746..2777135)       hypothetical protein; Clopa_2790                                                     N/A                 MLNMYDYLIEQIQPIVTCYSDEYPQDKQSAEGSKVYPYCTVLMYSAIPNNEYSNNNLVYIDVWSNQHGIEEVETLTDQIYQKLNKTTIMKDDMFIQISRYNPCRLNLNDPDINLKRRQLRFLVKTYEIN
complement(2777139..2777471)       hypothetical protein; Clopa_2791                                                     N/A                 MGLNWYGEAVKQAINGSKKEICTEWGVLLQAAYQARTPVISGNMKAHETFQVHDDNSGVDIGTTEVNYSIDVELGSSKQKAQHILENTVNGSTGKIVDVASKIISSKMGG
complement(2777490..2777807)       hypothetical protein; Clopa_2792                                                     N/A                 MVTNCTYALWNKTGGSVNSHGDYVTTPTFIKNISGDLQPYSTAQLLKSYGETIEVNNVLFYNHFGIDTDIKIGTILKNSDDTQEYEIRKFIPWDTYTQIFVFRIK
complement(2777797..2778186)       PHAGE_Entero_phiFL1A: hypothetical protein; Clopa_2793; phage(gi281416369)           3e-05               MAVLDDTKTLLGIGDTSMDGVLNIYIRRAVTKITTYLNIYTTQQTYTDCWGNTTTVDPIDVELTYPDAVIEDTIENFRKRGNEGIKQGSEGPRSQTYDNSLSDATKSLLPVPFVRMQSARPTDGGYYGY
complement(2778218..2778382)       hypothetical protein; Clopa_2794                                                     N/A                 MFTLQKLNVVRIVDSEIKKSRLIDEGFKLVKDKVEEVEQEVKKIEEKVTKGKTK
complement(2778402..2779334)       PHAGE_Clostr_phi_CD119: putative capsid protein; Clopa_2795; phage(gi90592716)       2e-60               MALNTIALATMFQQELDNQIVAKSTSGWMEQNANNLIFTGNATVKVPKMTTDGLGNYDKSNGYASGGITTSYETFTMGQDRARKFYLDSHDVTESNFVATASNAMATFQRVSVIPEIDAYRYSKIATTLIAGSRASGGYTPSKADILTTLKTDINNIQDVIGIDTPLVVVMSTKTLNTLELSSEIVRQLQVGDFQGNNDYVTPCKFVDECPILEVPSARLMTAYTYNDGITVGQTQGGFVPAGTAKHINWLIMPVDAPIAIQKTDTIRIFDPSVVQNLNAWQLDYRKYHDLFIEDNKLPAMFANIEEALS
complement(2779416..2780009)       PHAGE_Staphy_StauST398_3: hypothetical protein; Clopa_2796; phage(gi509140984)       9e-21               MAIENFDEVKSYFETNKDNDEVKNFLGGYSSLDVFKEKVNTDPNFKSYMDSAKDSHFSKALDTWKTNNLEKLVDEKVNQLYPKADPKDLELKKLQQQIDKMQKDTLHKELTNQALKMATDKKIPTDLVSYLVGQDEDSTNANIEKFAEIFQAHDEVIRTEFAKGNSYTPPENKNSGNLSEDEKLREQIKKAMGTFKK
complement(2780140..2781042)       PHAGE_Lactob_KC5a: putative phage head protein; Clopa_2797; phage(gi90592612)        4e-13               MAKINQQYRKTIEQIRLDSEDYADEQMQGIYQDQNDKLDEVHAMIGLIYIKYAVDGLLNLSGKQKTNILNDVQVKLTKISKDLGNAEVDKVTSILGDTYKTTYYKNAFVFDKLGINSNFNILKKQFIDQAINRVYKEETFSDRIWNNKASMVDRLYNLIKDASTGGTTIDQIGKQIKDAFGVQAYQSRRLVRTEVARNAVSSQEQIGKDAGCEQVQWSSVLDNRTAEYDASLDGQVWGINDDHPYPVENTHPNCRCILLNISYKGWTPDKRMDNETHQLIDYTDYATWAKNKGINDNTPD
complement(2781017..2782459)       PHAGE_Staphy_SpaA1: phage portal protein, SPP1; Clopa_2798; phage(gi399498867)       2e-31               MFDIEANRSILEACFSQFQTQWRIYQRMYFYYMGITDINHNLAWQMDGNYDDIIFNNYADAEGGGYSFINDRSHNKINTNFIKKFIKEEISYSVGNPITYSSKSADKNIVNILKENTWHWDENTDASLAKNMLIYSTAFELYYIDKDAQFCSKIISPRHGIMYNDDFGNPIFFLHIYRKTYDSQMYIDIYDNSQIIHCNEAFAEISPRQSHPFGIVPVGTAQISEESWLDSIYQDMKSLQDAYERNLSDISSEITEFRNAYLCFINCELDENELDKIRKDGIMKFKGNGSTTGSAQWLTKQINDTFIQNTLNTIIDLMYQISGHINHNIKESSNTSSLALRAKLIGLEDKCKLNQKSLHNCVKTRLQCLFTYLNSLKGSQLYDVKDILVTFTANIPQDDLQNANMVNTLGNRLSTQTALSLFSFVSDPEREMQQAQKEQEASTVGSDLLDQARAQSNQSSSQDKNMMNSGDMNGKDKPAV
complement(2782482..2784275)       PHAGE_Bacill_phBC6A51: hypothetical protein BC1891; Clopa_2799; phage(gi31415785)     3e-14               MRIIKFDNIEFNDNDQFNRYLLYKYLKQEYISNNLTEDEAEQISYQLILKYKDNLFGKNGLSYQLGKRNLKFFCMYYLQQIFCGHGCATIAPIHRKLWKEIQDIILYQHIDQKGYILPRGTGKSSFGTLAVSIWTACYGTKKMIVICSSTGKLAKKFLSQIKETIQGNKFIEKSFDTLINIKDRNFKNNEDVLQLSNDTQIEAYGSESSLRGVKNEKLNMRPDLILLDDYQDSKIDVKTEQGRDNKWDRYSSDLKYCKQRTLRNDDGDIIVNGTVILAFGTIQHQEDFYMRLYNSLTWSFTLEKGVLVDNIDELFEQDLWQEYKNILKDTSIKNDDIRVKKAKDFYISHKSEMSYPVLWESFWDKTELAKDYFENPSKFKQEVQSDLNSIGTKLFTTIISKPKDYIEDRKFSKCILGIDPAGITNKNTKKADSFAFCVLGKSGEIKYVRKGELLKFNNNSAIGYEEYIQHTLQLLRDFPEISVVYVEKNTYGGFDVNKMKDYISKDSILSNRDIQWVNEGQHKNKDDKIQTIVSDINMGKIIFNTEDKDFIEQIHEFAGCNFSEHDDAPDILSEVSRRIDDIQILYKVTSMDIRKLF
2788834..2788848                   attR                                                                                 N/A                 TAGTTTTCTTAATAT

#### region 7 ####
3137052..3137336                   PROPHAGE_Escher_MG1655: IS3 transposase A; Clopa_3138; phage(gi226524700)            6e-05               MKKQHDKQFKEDAVKYYMDHKELGVRGCAQNLDIGGSTLSKWIRDSKSENGIQVRGSGNYASDEQKEIARLKRELRDTKDALDVLKKAISILGK
3137333..3138244                   PROPHAGE_Lactoc_Il1403: transposase of IS904H; Clopa_3139; phage(gi15674055)         6e-43               MTEAIYLEVQDKCEDLKWKRQVSVNGMLRILGVSRSGYNSWLHRLPSNQQKRKEIVKEKIKEVYDQSHQNYGAPKITKEIRKAGEKISERTVGKYMKELGIKAQYVKPYTITTKDSDLSSKLENVLNEQFNPSAPNAVWCTDITYLWTNAGFVYLTSIMDLYSRRIIAWTLTETLAVSCVIDTINKAKKNRKLAKPVIIHSDRGSQYVSKEYQKAASKMILSYSKKAFPWDNACIESFHAIIKREWINRFRIKNYRHAYILVFEYIETFYNTTRIHSHCNYMSPNEFEKTYEKVKELSMSMAS
complement(3138289..3138699)       hypothetical protein; Clopa_3140                                                     N/A                 MDNYSADQEFEFIQSLYDEANQQLKEIYKNQKQNRDELLSELAKIMLIYIIADNLMKMSKNDRNKEYLRLSKMINNFSSGQAKFTENVMNDILNSTVKNTYNFYSYNAKLKDVKEIIDNNFKGKHFSTRVWVVLCQ
complement(3138692..3140035)       PHAGE_Staphy_SpaA1: phage portal protein, SPP1; Clopa_3141; phage(gi399498867)       3e-29               MKLSDLVKKLFGKQAALDLNDPEQLALVKKVYGTYNAYKHIYHKMYRYYKGDTDAMRKYKFVTERSNLKINVNYIKKFIKEEVSYTVGNAITYESRSDNENIVKDIEYYTAHWDELHDSDLMKYLLIFTKVYEIYYVDENADFCSKIIKPTEGYAYTDASGKALFFIHAFKNDFETTVTYIDVYTADYIYHFDSKFNQIAVPTENMFGEVPVSIGKLTLEEYHDSLYNDIKGLQDAFETNLSDIGNEISDFRNAYLIFTGCTVDSNKIPEMKQLGVLEAKNKDSTIQWLIKNINDTFIQNTLDRYIDTMYQIACHINHNESMVSNLSGIALRSRLIALENKCELEEKAHKNIVKNRLRFLCLYLNIKKNKGYDYKDIKALYTPNIPIDDLSTAQMLSQTPEGVISKDTARGLFSFINNKVAEAEKVKKEEAESLPHDNLDNLVNGNG
complement(3140049..3141827)       PHAGE_Rhodob_RcapMu: large terminase; Clopa_3142; phage(gi356870870)                 3e-17               MLENEDMEDIVDEEEQNTFLLYKYLLEVGFDEDAADKLILENSSNLFGYHGLAWQLGKMSLEFFSMYFLQDTFLVKEDNAAAPIADVHREIWQDIQESIIGNGNNQIGRILPRGTGKSAFGTFAAACWCHAYKLKTYTLICSDIGTTAEKFIKDIKNTFLENKYLEKAFGILLDDKDKRYVCNSTQLEFTNKTFIEAISSSSPMRGRKYGNSRPDLIILDDYQSEDDVRTEEAREKKWKRFSDDVKYAVQKAVIRNGKTIKKGTTLLALGTLQHKEDFYSRLIKQPTWEFRIEKGVLIDDFTDEKGQKNNGLDHYFNTGLWKKFKDILFNFKNKNHLADAKEFYWDHETEMKYPLLWSEFWDCLDYALSYYENPTSFKQEVQSDVDSIGEKWFKTVATYPRSENETHNFIKTMLLIDPASTTNGKSDYSAFLIGSQADNNLKYARRAELAKINARTDFDKYIDHAIKLLKEYPDATHVYIEKNTFNGADANQLELKINKDNVLKYRNIEIINEAQKKNKDDKISTIIPYMNKGQIIFAEEDSEFTDQILDFRGQKYSVHDDAPDITAEFNNRIENIEVVEKVNILDRRKFGL
complement(3142726..3142866)       hypothetical protein; Clopa_3143                                                     N/A                 MKVNTETNQGDLDKYKDCKTCPNRAEKKLCCCGCVFNFCKYSLEEY
complement(3142914..3143669)       PHAGE_Halomo_phiHAP_1: DNA adenine methyltransferase; Clopa_3144; phage(gi167832371)     1e-46               MLKPPINRMGGKSKLRKTIINMLPDHVCYVELFFGAGWVYFGKDPAKVEVINDIDKELINLFRMIKYHAPEIKRMLQYEFSDRDIFEEYKNYSLENLTEINRAVRFLYLITQSFGSKCGNYGYGTNAVPKQQIFHTETLNDLKERLKNTYVENLSFEKIIDKYDREYTCFFADPPYFETAGYGNEFGEKEHLLLRDKLSNIEGKFILTINDNLQVREWYKDFNLKEVEVNYSVSRNEKARGKYKELIITNY
complement(3143777..3144700)       PHAGE_Entero_phiEf11: conserved hypothetical protein; Clopa_3145; phage(gi282598759)     3e-31               MPDESEETKKKKKCFIVTPIDEEGSPMRRHIEGIIDSAIFPVLENDYKIDVAHRIYTPGSIGKQAISSIYEADLVIANLTGLNPNVMYELAFRHALRKPVITIMEKGDKKLPFDVVTERTIFYINDSKGVLELKEELKKQVEALKIIDCNTLDNPIFSALESTIEEKNILGKIKESEPIDANAVKYILDRLDKIENKIENNNKYNNSRNFNKKLIRIIIKNNEKLSYDIRNSISNMISNMIMTIDNTNSTSIRNTDYGFEFMMNQYNNSDYMLESIIKNMLTEALFKIGIDNINFKINIIDIEKSSN

#### region 8 ####
3197470..3198747                   PROPHAGE_Shewan_MR-1: IS110 family transposase; Clopa_3207; phage(gi24375433)        6e-09               MKKLDYLSTLFVGIDIGARQNVVSAINFDQEFLIKMEPVPNTQFGAEQLESMLVKVLEKNTFKTVIIGLESTSFYGVHIANFLSSSERLMPYKPYVYCLNPKEVANYKDSFNSLDKNDSIDSFVIADFARVGRIHTEPWRGSQYLALQRLTRHRLHIVECLTREKTYMLSNVFLKFSEFALLQGDDHPFSDKYGATASSILTDFLSSEDIANTSIEDLVDFVNKKSRKRISNPQMTAEILQQAARNSYRLDKCLYEPLTTSIACSFNCIQAFEKELKAINKAIEKAVMGMNPVEYQILMSIPGFGPVYSSGILSELGSVHAFPNNNAIAKYAGIVWKENQSGGFKAENTPMNKAGNRYLRYYLIEAAGSIVRYIPEYQEFYQKKFAEVTTHQHKRALALTSRKLIRLIFGLLAKNQLYSSNRVDK
complement(3199196..3199576)       hypothetical protein; Clopa_3208                                                     N/A                 MLSQTVINEIIIPIIGAGVVTVLEIGRRQLKNFLDAHKELIEKQKEALEKTIGTEQYNKDVAVVKNTVKAVEQLGKEFNWEGAIKHSKVLELIKGKTGLSDDEIFNIIKGAVLEVNSLKNNSIVQK
complement(3199769..3200710)       PHAGE_Clostr_PhiS63: gp21; Clopa_3209; phage(gi388570650)                            4e-16               MKGIDIYSGTIITDWNAVKTDGVEAVYVKATEGINYINPLMDSQYREAKGRGLKVGFYHFAGRNIPAQEYQHFINTISKYQQDLKPVLGYEVANPDMSFVTVFMALNPGLLSYAAHNVADQSGLPKNKIWIAEPGATPADTKGYAGIQHSWTGRVAGMQGDVDVDLFSNDVLIDSNNVVLTASSAPQQPVQQGDPAVRIIQQQLNYLIKVNLTIDSIRGELTNNAIKAFQGIMGLVQDAIWGPKTIAAVTEIYSKPLDGVQYQHYEYATRFIQWIVGVTIDGVFGNETKIKVQNWQASTWINSRRSSWDSNMG
complement(3200714..3201112)       PHAGE_Clostr_vB_CpeS_CP51: putative holin; Clopa_3210; phage(gi509140062)            3e-35               MNQKEVFNSIIAGLGCFFTYAFGGWDKCLMALAFFMAIDYATGVFSGYVQKKLSSDIGRKVIFKKLTIIFVVIMAVVLDRLINNGTWVFRTLVCYFYIGNEAISIFENAAKMGIPVPKKLVNAMEQLKKEEE
complement(3201176..3201391)       PHAGE_Clostr_phiSM101: hypothetical protein; Clopa_3211; phage(gi110804071)          6e-08               MEDTKLTLFYSKQTGAITAFCTGMQDMSYFASNEEDMKIIWDFIVADYDKYIIKNKDDYYIDLSTKTVKSK
complement(3202053..3202202)       PHAGE_Rhodob_RcapNL: C-5 cytosine-specific DNA methylase; Clopa_3213; phage(gi461474996)     7e-09               MKQISILDEIIVDNFAGGGGASTGIELAIGHSVEIAINHDPAAIAMHKV
3202409..3202600                   hypothetical protein; Clopa_3214                                                     N/A                 MANLNVDKNLISTNDTARVAIPAIPPIQAQTQAQIEAEIQRITQQIEQQITQILTKIELQSRL
complement(3202842..3203300)       PHAGE_Clostr_phi3626: putative single stranded DNA binding protein; Clopa_3215; phage(gi20066002)     1e-24               MNKIQLVGHLVKDPDLKFIQGSGTPVVKFTLVINRPRFDKNKPQEADFFNCTMFGKRAETIANYVFKGHLFGLSGRVQINKYAAQDGTNRWSTDVMVEDFDLLQPKGVDNNSKNQSSKVLEPVKNNDEYLKADITPIDDGDIPFKIAVSQAA
complement(3203364..3203936)       PHAGE_Strept_Dp_1: hypothetical protein; Clopa_3216; phage(gi327198335)              8e-24               MKDIKVIKEQIINLLSNVKRENIDKVVKYLVEGDFFTAPASTRFHGNFSGGLAEHSLNVYELFKRKNEIYDFGLSYDTVTISSLLHDICKVNFYTVYDKNVNIAKTGEKPKWIKTPAYGVNDLMPIGHGEKSVILLQQFIKLTKEEVILIRWHMGGYEAKENLNTISAAWNMYKAGVALHTADLESSYIL
complement(3203933..3204217)       hypothetical protein; Clopa_3217                                                     N/A                 MITSSNIFIKSDDDYSFNPESKDTLILKCPETTWIIGSWDAFNKLFTAIDQVLHEEKETHSSLQDRLLESETKTDKLREENEYLREQLELRRQA
complement(3204229..3204474)       hypothetical protein; Clopa_3218                                                     N/A                 MELGRQKGLVIGEGKGSDVSKLEALANEHKISLRGLTYDSANTLLKLVEEYTEVVDVEVTPVNDDPGPDAPPEDIDDADPF
3204614..3204922                   PHAGE_Clostr_PhiS63: gp26; Clopa_3219; phage(gi388570671)                            3e-05               MVGMSHSGIAEIEGGRVKGTVDFIDKLSQATNTTISHWTEGENPENIKCYNHESLDVLIDSMIDTGIIKEDGKLNEMAQNLILKVLEKEIIQRIEKNKRDKK

#### region 9 ####
3354143..3354154                   attL                                                                                 N/A                 TTACTATTAATA
complement(3355552..3356184)       PHAGE_Thermo_THSA_485A: hypothetical protein; Clopa_3367; phage(gi397912628)         3e-13               MFYILFIILGITILGYVLLDNFQSKIKNNFTRVYPGKVYTESIFYYIVEDDGVILVPKLSSGDKSKHIKLSNINDIRFFKDGKEKSNTDKAVVGAVTFGVPGAIIGSNMKTKKIIKDMGIKIYTDKEVYSLDFVGNGCEEGRAVYRRAAARIDFTYNMLLKYIKKDKDNIEHKEIIDITGQIEKLADLKAKGILTEEEFQNKKTELLERI
complement(3356249..3356536)       hypothetical protein; Clopa_3368                                                     N/A                 MAFKNKEKYYIEMTKLVKVMRWTISALNNINLDDLPSIEDFIGEYPTYGEKETIKEETPIEDKQEPSESEKEWVEWAKKNGLSVAKTSTGVKIRK
complement(3356605..3356943)       hypothetical protein; Clopa_3369                                                     N/A                 MRTKNVTVAGIEVTVRERKIKELKELAITLGINQDLMKLGPSALYDKAKDLFYNQISVVFPELKGTDLEEAYPSELEELVNAFLDANFTGAKKVAIPLLSLAQRYLSSSQKN
complement(3356958..3357518)       PHAGE_Paenib_phiIBB_Pl23: major tail protein; Clopa_3370; phage(gi526245021)         8e-07               MTTKTGIKGNVKIDIDLSGATAFQPTHPYAIGDLATNTGKTYYCTTAHTSGATFDTTEQLNWVDVTNGAMVSKLNAWKIAIKQALINATYFGDGGWDSSVPGIKDWSGQADGSFNVTDDKIGQKAIQDAITDGSLITLSLIVDDSVDAEKYSGKAYISEVDIDTQTKDLVKFSFKFTGNGPLTMPS
complement(3357529..3357891)       hypothetical protein; Clopa_3371                                                     N/A                 MLEEIGAALQSKNIATLAVDLFYNSMPSSPDICTTLYQTGGFEPGLNFDKSSEEKPTFQVMCRGTSQVETNARIQSIYKYLHGNSDIFPFIQAIQSPTSLGRDANNRWEFSCNFKIIKEL
complement(3357900..3358337)       hypothetical protein; Clopa_3372                                                     N/A                 MSDTEWTQIEGLAELEKNFDKALKEMGVINNKAFTDITLDLLGKSVKEAPVDLGDLRGSGSATINGTTVATGNKEGGINPGGNAQDEEIMQGTVGFSEPYAVKQHEHLEYQHPKGGKAKYLEDPFKANSQNYIDHIAQANRDHLG
complement(3358334..3358612)       hypothetical protein; Clopa_3373                                                     N/A                 MIEDYFNSNVVWKKSTGTNAYDEKTYENIDTPCLKIDKIRLTRNKLGEQVSSTSTIRMKNEPGYDDMLDDRTIITINSMNGLDGIEGYEVLI
complement(3358609..3359121)       PHAGE_Cyanop_MED4_184: hypothetical protein; Clopa_3374; phage(gi472340560)          4e-07               MAVNLVVGTNSYIDVPTAQTYFDDRLYSDAWENATDDNKAKALIMASKKLDRLPIKGVKANYYQSMEFPRALETDYRYWQYMSLTIDAHFYGYWYVEPAVTDNVKNAVCEEALALLKGVPKRIELQRQGVKSFSFNGGMSENYGNGKNMLLYSQEAREFMQPYFGSVSLA
complement(3359123..3359347)       hypothetical protein; Clopa_3375                                                     N/A                 MSKIDEKAEEKSSDDSVIEETENKPVEKPSSYIIKEDCKVTYKGHFLEYKKGTKLDNLIGKYLLETGAPVKEVK
complement(3359340..3360581)       hypothetical protein; Clopa_3376                                                     N/A                 MSVNAFPAAIAAMIQNGILDRTFQEALLPNFLYRNLATQRPFQGNLGETVLFTRTGLLSTAETPLTPGSDPTPQSYSIEQYAMTLNQYGNAMDTNMLTSKIGLSSKFLEDNMKLGINAGQTVNRICRNKLYGAYSSGNTYAVGAGSAITALVVNDVTGFTTQLVNGVQTAVGAGNPIPVVVSGNANTVVAVNVGTKTLTLGTAATWVDSDPVVAVNAPQIFRPNARADTKKLIAGDSATLAIFLDAVAALRQNNVPSFGGYYAAHIDAVTERQLFADADFKQALQGRQDSPVWGSLSIGRFAGIDWVRNTEAPTVANGALTVRRPMVVGADALIEGPLQGFGELLGEANFAEARDSGIVSMVDGVAFIHRPPIDRLQQVISSAWSWVGDYAVPTDALTGAAAQYKRAAVIEHV
complement(3360612..3361196)       PHAGE_Bacill_SPP1: hypothetical protein SPP1p020; Clopa_3377; phage(gi22855064)      9e-20               MADLKKILGEELYNQVTEKLGENKIDVVSDGSYIPKNKFDEINTQNETYKTQVGTLNGQLKDFEKAAKGNEDLLAQIETMKTDNEALNGKIKDITLDSAIKLGLVNNNAKYADLLTGKIDKSKLQLGDNGSVIGLDEQIKGLQEGYKDLFQSTVNPSPGANPAGGGDPVKTDFRNASKEDYQKEMGKYGIHRFF
complement(3361242..3361697)       PHAGE_Entero_N4: gp49; Clopa_3378; phage(gi119952225)                                2e-15               MSKVKIISDGVKTRVFIDDKPITRVTSLKLSQSAMEAPKLTLEIAPKSLEIDGKDIPIEFSEDVSVKNSFGYALELLKHGKAVKRRGWNGKNMFLSYVTAAEWNPKHRNLLLGWLKLGFIAIKTADDYVVPWQPSQADMLTEDWEEVELWK
complement(3361697..3361939)       hypothetical protein; Clopa_3379                                                     N/A                 MIKTIIIDLAGLFMIASCIYDMHVNHKADKFNEEMRETNKELERQVKQMNTPKISIQLDSKEIVKTINKSMEAEQRKAGL
complement(3361936..3362994)       PHAGE_Lister_A006: gp4; Clopa_3380; phage(gi157325456)                               7e-11               MSDKLVQKLIEIYQKAKQDLVKTIAEKEAIGNLVTYQKSLLFQVNQILSELTSQAYNLTNEIVESYYKDTIDEVLQDLKDKGEQIQATGFSKLHTGAIAVIAKNFFQDLQDANNFVGRQISDAIRKAGLDAVSQKIATGQTVQECKKNLVNMLIDQGFNGIKDKRGRMISLDAYASTVARSTTTETTNTATTNQLTELGYDLVQMTEHSPTCAICALYQGRVYSISGKDTRFPSLSVAFNGEFANIHPNCAHRLFPYIESLADNFDKDIEFSNRPFELSEKDKKVLETYNNQQKEKIKLRNDRDQWQRYKLAMPQDTPKNFASFRRNKNLNNNKYQNLLSSYRSLRQGGEGD
complement(3362994..3364520)       PHAGE_Bacill_BCD7: putative portal protein; Clopa_3381; phage(gi422936058)           1e-05               MLTDLSFLDIDQPWPPQNETDRLQQYQTNKRLFEGDHTAVYADQFHRIERVIGNFQDIISYAVLANFQKIISLKTADLLLGEAPQIKIDERSSVEQKTVDSIVESSDLINTAYENTIDISRYGDGLFFIYKDTDTGAGRIDVTQPSIWFPIVSADNVKKIQYHVLAWTFEVKAPQKTGFWQQFFTSTSEKESFLKVQIHSKGSYEEKLYKLENGTPTRIKELISSDVKQTGLNNFAIVQVSNIITSDRITGLNDYDDISSLISELEVRVSQVARILDKHAAPSVQGPSTAIEKDPRTGQYALKMGNYFPRDSTDDPPVEYVTWDAQLNANFTIINKLINLLYTISEMGNTIFGDMSGQSMGTGNLSGIALRRLMMSPLAKVNRIRMRMDTALKKALKLCSQLGGEGIVDLSDKPISIIWKDGLPEDPQEMAQVMQIRTGSKPTISQFRAVQQLDNTNDIDTQLEIDRINEDEARTNPMSGQNFPFSSTAVNTDPNNNNKNHMNMGGAD
complement(3364535..3366286)       PHAGE_Rhodob_RcapMu: large terminase; Clopa_3382; phage(gi356870870)                 4e-14               MFKNEDEQNRYLIYKYLQDVGFSEEATIDMIIKHSSNLFGYHGLAYQLGKMSLEFFCMYFLQDIFLPKEDNAAAPIAKVHEEIWQDIQESIVGDGNNQIGRILPRGTGKSAFGTFAATIWAHAYKFKIYTLICSDIGTTAEKFIKDIKDTFLENKYIEKAFGKLLDDKNKRYICNATQLEFTNKTFIEAISSGSPMRGRKYGNNRPDLIILDDYQSEDDVRTESAREKKWKKFSDDVKYAVQKAVVRNGKTVKKGTTLIALGTLQHKECFYSRLLKQPTWKFKIEKGVLIDDFVNEEDEKINGLDHYFSTGLWAEFKNILFNFKNKNHLEDAKEFYWQHESEMQYPLLWKEFWDCLDYALSYYENPTSFKQEVQSDVDSIGEKWFKTVATELRKEIETHKFIKTMLCVDPASTSKGTSDYSAYLVGSLGDNNLKYARKAELAKINARTDFDKYIGHMIKLLLEYHEIRTVYIEKNTFNGADANQLELKINKNFILKSRNIKIINESQRKNKDDKISTIIPFMNKGQIIFAEEDEDFTEQILEFRGQKFSVHDDAPDVTAEFANRIENVKRSSSMEPVVVNGLY
3366401..3366529                   hypothetical protein; Clopa_3383                                                     N/A                 MKHNLEYINLVLDIIVNFSILYPIIKKAVKELIKKKSYITIN
complement(3366959..3367363)       resolvase family protein; Clopa_3384                                                 N/A                 MLTKDQEELVTLLIQGEKITDIAKKLNKARSTIYEWMKLDDINNELDRRKQELAHQGNNYIMRDLYTYIDNIKELADDKSDKRVCLAANQYLINRIYGNPTAVIDTNSDDVNENVNENELELELKRFKQIRKVK
complement(3367509..3367952)       PHAGE_Clostr_phi_CD119: hypothetical protein CDBPCV119_gp73; Clopa_3385; phage(gi90592709)     4e-17               MDDRVFKKIESDLYNYKYLNVKIENLKIKVEDISNSYDGCTAISYEERTGKTNKFNSSVENEVVNRIENAMPAIGELERKITYYINLKKKIDNALTVLSPMQRQLVELRYFSFPTRSWVSIERDLHMNKDYCCTKRKEVITLLSKLI
complement(3367957..3368115)       hypothetical protein; Clopa_3386                                                     N/A                 MAKISANDMYKNRIEQIKYDLQQEYYKGKRKSNNKIKKLSEEKERLEKLVRW
complement(3368216..3368380)       hypothetical protein; Clopa_3387                                                     N/A                 MSLDSIKVYKHNIENIKKQENRAILDKKWTELAKLRVKRADFEAKIKEIEEGNL
complement(3368734..3371310)       PHAGE_Helico_1961P: DNA primase; Clopa_3388; phage(gi422935771)                      1e-08               MEIQDIDLKELIERETGEHFNRQGYVRCPFHNEKTPSLSVKFFPDANKEKFKCFGCDEVGDAIDFIMKLRNLNYVEAREYLGLTVEKSIYEIQTEKVKSYIEWQIEKCDFRKGQKLLGLFEFVNEKNEVVYYKAKLLKPDEKKDLSYYHVEDDKVINKRGTDELIYNYHSVLEGIEDKKIVIICEGEKDANKLSSVLKKDKYVATSIKGCKDLSILEGAKIYVCSDTGEAGEKYKWHIYNELFACAKAFKFINLPGIKNLGDNKDVTDWLDAGHDKFDLLKAFGRSLDLKSEYELQQNKDGIYKTAYKGKGEEAEKYKKYIANFRLLEATRINFVDDNKEGIKLVFKSSTGETITREGPSTVFDDLRSFKNFLGTIDLNFKGKVEELGDFKEWVNNYFALEVEEIHEGAGFIQKDEKLIFITNDGTIDNGNVLKNIKADAKDNIDVIGIAPIEKEELKEIRKHIFKFATPEKTISIIGTVINNLAVYQNQKMKEKLHHLLIVGESGSGKSTITENVIIPILNYPRKAKEAIGSGKPFSIIKGLSTGNYTKIYEEFKPSKMDRYTISKISDILRNLYDRDTISRGNKSLRVDYYQLIRPVIIVGEESYPNQEKALIERSCIVYLGKREREEKHTEAMKWITENEEILSKFGRSLIDIVLSLSLDQYREMRNAAESNIKGLKDRPLCTAVNICCGIEIFNILLKQNNIAPINNYYNHIITNIKSEILQGGEEAHSVVEGMLTLYNDLIEDGRAYEYEKVVRCRGDGVFIKTTEMLNQINEYINRVGNNDITSLGVRDFRKQAAKSGYLEGTSNKVIKIDNKPVKFDTYSKELLKKLNVNSIVPPDYIDVTSMDDNVIPFK
complement(3371348..3371545)       hypothetical protein; Clopa_3389                                                     N/A                 MSDIKKVTSEEASKIIETREPLGKFYTIEKDFKTGKRIYVGIDNQCGDAWTEDFKCLTTCKNWLG
complement(3371538..3372125)       PHAGE_Clostr_phiCP13O: hypothetical protein; Clopa_3390; phage(gi422935104)          6e-32               MHYKFSETEIKKLLKENFMILYDTREQINGHILDYFDKKKVPYKKKKIDEGDYTAIITKRPDMGIYRDLYFPVAVERKNSIDELAGNLAEETDTHDDVRLIRELQRAKTKGIKIYLIIEDKNGMENIKTGNYRSLYTPKALLGRLSSIQDLYLYDTIFTERINSGFEIYRKLYYSVRNFLKELDMDISPEAESYE
complement(3373723..3374163)       PHAGE_Lister_A006: gp53; Clopa_3392; phage(gi157325471)                              1e-35               MNRVVLIGRLTKDPDLKFTPGSGNAVCTFTLAVDRNFTDKNTGKREADFVPIVVWNKIGESAANYLTKGKLAGISGRIQTRNYEAKDGHRVYITEVVADEVQFLEWDKKPVDGEINNQGGKVLEPVKNIDTEYGDITPIDDGDIPF
complement(3374174..3374797)       PHAGE_Strept_Dp_1: hypothetical protein; Clopa_3393; phage(gi327198335)              2e-23               MKDIKVVKEQIINLLSNVKRENIDKVAKYLVEGDFFTAPASTRFHGNFSGGLAEHSLNVYELFKRKNEIYDFGLSYDTVTISSLLHDICKVNFYTVYDKNVNIAKAGEKPKWIKTPAYGVNDLMPIGHGDKSVILLQQFIKLTKEEVILIRWHMGGYEAKENLNTISNAWNMYKAGVALHTADLESSYILEDHFEPGEDSNQVKFKQ
complement(3374794..3375084)       hypothetical protein; Clopa_3394                                                     N/A                 MISNANIFLEENDKYSFKPLDRNSDTIIFKFSDGTWITGTWDAFNKLFHTIDEMLHEEKETYISLQDRLSEVETKADKLQEENDYLRTKLSIRRQA
complement(3375096..3376052)       PHAGE_Lister_B054: gp50; Clopa_3395; phage(gi157325334)                              4e-37               MRNDNTDVLAMGRVEYEVNGTQIKLTSTIVKKYLVSGDPTRVTDEEVGVFLQLCKGQKLNPFLREAYLVKFGNKPAAMIVGKDTFTKRELRNQDSEGHEAGIIVVNLKKEVEQRSGTFYLKGQETLVGGWAKAYRKNKKFPTEITVTLDEYIGKKADGTINSNWTQRPATMIRKVALVQALREAYPEEFEGLYVAEEMNVDDKDLSTDPVDVEKEIEKENEAPEQPKPVQKEQKQYLMQLGAQKGLVTGEGKEADVSKLEALANEHKISLRGLTYDSANTLLKLVEEYTEVVDVEVTPVNDDPGTDAPPEDIDDADPF
complement(3376052..3377731)       PHAGE_Paenib_phiIBB_Pl23: hypothetical protein; Clopa_3396; phage(gi526245057)       1e-32               MQVNINKIAIKGFKGYVDECEFVLGKRTLVSGDNGLGKSSIGEAIAWAITGCDINGNEKATARLVNDKKPKLTEVVLDLEIDGTPQTLIRRKKGSSNEIYLNDVKVANNDISRDLYKSKDVFLSILNPYYFPNLAPKDAKNLLSSILKPISKEDIFAELGDFLKEKLEKNKFRTPETFLTDKRAELKDQEENIIFLEGVIEGAKPIDIPERKSFADTELKNLREQLKSLESVSKDPNFDRLERKKRDLELELLKGYLDIKPIEGTKWLRAEKDSLLKRFRDIEAKTSNIGKNVVTCDNCGNEIDLNATLKVSLEKELNEVKAEGIAKKKEIDELEKENEITKAENMKVVQEWEIGLKYQIETIQKEISNLAAEKSKEEESRKEKITSIKAKVLELDEEERRIFAHNSNIEALEKQNEKIKHDIEKSKREIENSKLKIAELKVAIDAGKQYNSIKLKKQTEIIGKYLDKVELQFEKLTKDGELKDDFKILYEGREFNKLSNAEKIKAGLEMSNFVSNMMDLHFPVFIDNAESITVIQELDTQMIMAKVVEGQELKVEVLK
complement(3377826..3378005)       hypothetical protein; Clopa_3397                                                     N/A                 MIRKLLEQNGLKMSDTKFKEVMTETQNDIRENHLRLGVRTSKDYLLKVAIIYYGISKSI
complement(3377971..3378261)       hypothetical protein; Clopa_3398                                                     N/A                 MVFENLMALHVAIRRNCPPEIAFKYIDNLAWLERKRSPNFDWIEKDVKDVLKFREEGLSWSEIGSYYGTTASGVCHAVITRRKNKVDKKIVRAKRS
complement(3378261..3378398)       hypothetical protein; Clopa_3399                                                     N/A                 MKITAKKKKQVINLKKEGKSYKDIFLIARVRFENARKIIKEAGVK
complement(3378398..3378760)       hypothetical protein; Clopa_3400                                                     N/A                 MKINENYKIEAIDERNVCIMERKIPKAEPGKEPKKPYWKTEGYYPNIEFALKSLVTKEINGTGIKGLKTITDKIKELHELIGGLNYKTAMELLEYEKKNKELEAQLEEMSERILDLEACK
complement(3378773..3378976)       hypothetical protein; Clopa_3401                                                     N/A                 MNKYQKVINQITKDHLEKTFMPIPFVTTRKAIRKKFKRVTNEYGYKSLRFSTLLKIKQYGKDHEFRA
complement(3379133..3379438)       hypothetical protein; Clopa_3402                                                     N/A                 MDKLLTKKDLAERWQVSERTIDQYRENRIIVPVKGIPCIRYNLQYIEKIEGCIPERATLRERKLEKELEEVKKERDCFKGILQTVLAESSKIISFQEKKVV
complement(3379431..3379643)       putative transcriptional regulator; Clopa_3403                                       N/A                 MNRIKEFRQSIGMTVKELSLASGVAVGYISDIENDNMNETNPTKLVMEKISSALGKTVPEIFYEGVKSCG
3379851..3380243                   PHAGE_Bacill_phi105: immunity repressor; Clopa_3404; phage(gi22855027)               5e-08               MNGYNIKKIREEKHITINKLAELAGMSVGYLSDIENNKKKNPTIDKIEKIADALGITIKELLTTEEQLNYTIDTIKNIHNIVKEGLENSSYVVDNKNNLILEPFYDVEFTETERSEIVQYMKYLLSKRKR
3379894..3379905                   attR                                                                                 N/A                 TTACTATTAATA
3380256..3381344                   PHAGE_Lister_A006: gp28; Clopa_3405; phage(gi157325443)                              4e-29               MQYNITYRKKDNGWQYIISYKDNLGKWKQKSKQGFPLNKEGKQAAKDAALVTVDELKLKSCIVEHNECDKMSFKEFGEKFIKHETLYKTANTISSHYSSLKKFSSLYDLSLPEITNLDVQNCIDLLVNKKLKASTIKWHLSNIKLIFAYAKEKYKLIQENPASNIDIPVDENTSEKTALTITQLEDLLKKIQYKPFFLMSLLAAKCGLRIGEIVGLRWSDIDEPRSILQVSLQWKKIDSNKYGLGKLKTNNSKREVPIPVVVMDELMKFKKENPINFDNRIFKNKSLVGISSDLSRNYKKAGYSITVHELRHTYATMLISHGVDFKTAAKLLGHDIKQTMNTYSHVTSDMIENASKKINTIF

#### region 10 ####
4368595..4368608                   attL                                                                                 N/A                 TCAATGTATCTATT
complement(4372224..4372838)       PHAGE_Clostr_phiCP26F: hypothetical protein; Clopa_4295; phage(gi422933952)          8e-44               MNFKDLTGMKFERLKVVKRIGKTAGGKVQWLCQCDCGNTTIATTDNLKRLHVTSCGCRQKDIISEVNTIHDLCHTRLYTIWAGMKNRCCNSYTPTYKNYGARGIRVCNEWLNSFEIFYNWAITHGYKDTLTIDRKDNNGNYEPGNCRWATDKEQSNNKRTNVYITYNGRTQTAKQWSDELDINYSTLLRRFHKGWPVFGLLQGL
complement(4373146..4373559)       resolvase family protein; Clopa_4296                                                 N/A                 MAYDVLTVKQNDMVTMLIQGETITDIAKKLGVVRQTVYDWMAKDNIKAVLDRRRQDLTNQGNRLILKDINTYIGNIKELANDDSDKRVCLAANQYLLNRILGNPTTSIIDANSDDNDGSISELVLEERLKRFKVIKK
complement(4373852..4374295)       PHAGE_Clostr_phi_CD119: hypothetical protein CDBPCV119_gp73; Clopa_4297; phage(gi90592709)     2e-21               MVIIKYYKGVESNLYNYKAMQAEIKNIDLELNELKNEYNGCSSISYEEKAAPTNKFNSSVENEMIDRRLKPEQLKIKKHKLEVQLQKIDNALETLSEDEMHLVELRYFKKLQFKVIAERIDRNEMYCVCLKSKIIKKLIPLIFLLDK
complement(4374300..4374458)       hypothetical protein; Clopa_4298                                                     N/A                 MAKISANDMYKNRIEQINHDLQQEYYKGKRKSKNKIKKLSEEKERLEKLVRW
complement(4374559..4374723)       hypothetical protein; Clopa_4299                                                     N/A                 MSLDSATVYKHNIENIKKQENRAILDKKWTELAKLRVKRADFEAKIKEIEEGKL
complement(4375034..4377640)       PHAGE_Haloru_CGphi46: hypothetical protein; Clopa_4300; phage(gi514051278)           1e-09               MKSYHGGGGKLEIQDIDLKELIERETGEHFNRQGYIRCPFHNEKTPSLSVKFFPDANKEKFKCFGCDEVGDAIDFITKLKNFNYVEAREYLGLTVEKSIQEQQVEKIKGYIDWQISKGLKKGKLVGLFEYVNDKNEIMYFKAKFKNEDGEKSLSYYHIENDKVINKRKGEEFIYNYYSVLEGIKDGKIVIICEGEKDANKLNSTLKKDKYVATSIKGCKDLSALEGAKIYVCSDTGEAGEKYKWHIYNELFACAKAFKFINLPGIKNLGDNKDVTDWLDAGHDKFDLLKAFGRSLDLKNKYELQQDREGIYKIVRKVKKDDFEESRINITNFRLIKATRISFEDEEQEGVKLILKSPTGNVIEKIGPSTVFDDLKSYRNFLGTIDLSFSGNMDNLVELKSWINNYFALEVEEIHQGVKFKEKNEELLFITNDGAIGKNGTTETIKADKRNNADVIGIEPISAEELKKLKNHILKFATPEKTISIIGTIINDLAIYQNQKMKEKLHHLLIVGESGSGKSTILENVIAPILNYPKRDIKSIGLITPFALIKGLSDGNYPMLFDEFKPSSLGRYKVAKLSETLRNLYDRATISRGDKSFKSKDFQLNRPLVLVGEESYPNQEKALIERSCIVYLSKREREQKHTEAMEWINANEEILNKFGKSIIDIILNLSVDEYREMRKAVKQSIKGLNNRPLNTAVNICCGIEIFNILLKKHDLKTITKYEDHVIKNIETEILDGGADAHSTVEQMLILYNDMIEDKRNEKDGELNPVLCRGDGVFIKTSEMLNQIRVHIRNTNLNMNILDNKDFKKQATKAGYLVKASNKVVWINEKSIRFDTYNKEMLSNLRLYGIVPPEIIDITGDIDEGNTNIS
complement(4377715..4377840)       hypothetical protein; Clopa_4301                                                     N/A                 MSDIKKVTSEEASKIIETREPLGKFYTIEKDFKTGKRNMLA
complement(4377833..4378420)       PHAGE_Clostr_phiCP26F: hypothetical protein; Clopa_4302; phage(gi422933987)          5e-31               MHYKFSETEIKKLLKENFQILYDTREQANLHILDYLDKKKVSYKKKKIDEGDYTAIITKRPDMGIYRDLYFPVAVERKNSIDEIAGNLAEETDTHDDVRLIRELQRAKTKGIKIYLIIEDKNGMENIKTGNYRSLYTPKALLGRLSSIQDLYLYDTIFTERVNSGFEIYRKLYYSVRNFLKELDMDISPEAESYE
complement(4378519..4378692)       hypothetical protein; Clopa_4303                                                     N/A                 MIRIMLENISDEINIKGLIECGCKSCKKSIEAGHGNPKHCETCAKNNIEYYFINKQE
complement(4378771..4379238)       PHAGE_Lister_A118: putative SSB protein; Clopa_4304; phage(gi16798847)               6e-36               MNRVVLIGRLTKDPDLKFTPGSGNAVCTFNLAVERNFTDKNTGKREADFIPIVVWGKTAESSANYLNKGKLAGISGRIQTRNYEAKDGHRVYVTEIIADEVQFLEWDKKAVDGEINNQGSKVLEPVKNNDEYLKADITPIDDGDIPFKIAVSQAA
complement(4379239..4379856)       PHAGE_Strept_Dp_1: hypothetical protein; Clopa_4305; phage(gi327198335)              3e-30               MKDIKVVKEQILNLLSNVQKPGMDKLIMYLVASDFFVAPASTKYHGNYDGGLAEHSLNVYELLKEKNERFQLGLSEDTVVVTALLHDFCKINFYNKQTCWKKNDSNRWESYEGYKVQDDFPVGHGEKSVIMIQNFIRLTKQEILLIRWHMGNTEPKEMQMNLNNAWELFPAAVALHTADMEASYLLEQHIEPGQDSNQVKFSEVK
complement(4379853..4380137)       hypothetical protein; Clopa_4306                                                     N/A                 MVTSVNIFIKSDDNYSFNPENKDTFILKCPEATWIIGSWDAFNKLFAIIDEMLHEEKETHALLQDRLLESETRADKLQEENEYLREQLELRRQK
complement(4380149..4381105)       PHAGE_Lister_B054: gp50; Clopa_4307; phage(gi157325334)                              6e-37               MRNDNTDVLAMGRVEYEVNGTQIKLTSTIVKKYLVSGDPTRVTDEEVGVFLQLCKGQKLNPFLREAYLVKFGNKPAAMIVGKDTFTKRELRNQDSEGHEAGIIVVNLKKEVEQRSGTFYLKGEEKLVGGWAKAYRKNKKFPTEITVTLDEYIGKKADGTINSNWTQRPATMIRKVALVQALREAYPEEFEGLYVAEEMNVDDKDLNTEPVDPEKEIEKENEVPEQPKPVQREQKEYLMQLGAQKGLVIGEGKEADVSKLEALANEHKISLRGLTYESANTLLKLVEEYTEVVDVEVTPVNDDPGPDAPPDDIDDADPF
complement(4381105..4382784)       PHAGE_Paenib_phiIBB_Pl23: hypothetical protein; Clopa_4308; phage(gi526245057)       2e-33               MQVNINKIAIKGFKGYVDECEFVLGKRTLVSGDNGLGKSSIGEAIAWAITGCDINGNEKATARLVNDKKPKLTEVVLDFEIDGTPQTLIRRKKGSSNEIYLNDVKVANNDISRDLYKSKDVFLSILNPYYFPNLAPKDAKNLLSSILKPISKEEIFAELGDFLKEKLEKNKFRTPETFLTDKRAELKDQEENIIFLEGVIEGAKPIDISERKSFDNTELKNLKEQLKTLESVIKDPKFDELENKKRKLQLEFSKGYFDVKPINDTKWHKAEKDSLLKRFKEIKVKISNLGKNVVTCDNCGNEIDLNATLKANLEKELKDIQIKGVAKKKEIEEWEKENEITKAENAKAVQEWEIGLKYQIEAIQKEISELAAEKSKEEESRKEKITSIKAKVLELDEEERKVFAHNSNIEALEKENEKIKHDIEKSKREIENSKLKIAELKVAIDAGKQYNSIKLKKQTDIIGKYLDKVELQFEKLTKDGELKDDFKILYEGREFNKLSNAEKIKAGLEMSNFVSNMMDLHFPVFIDNAESITVIQELDTQMIMAKVVEGQELKVEVLK
complement(4382878..4383057)       hypothetical protein; Clopa_4309                                                     N/A                 MIRKLLEQQGIKMSDQEFNEVMEETQNDIRENHIKLGVRTSKDYLLRVAIIYYGISKSI
complement(4383072..4383620)       PHAGE_Clostr_vB_CpeS_CP51: putative sporulation sigma factor; Clopa_4310; phage(gi509140076)     2e-27               MIDVQEHLGLAKLQAGRVYKKFQLSYRYDFDDILQICHVGLIKAAQKFDETKGYKFSTYALSLMYGYTLNIILRDKFYPSAERNGSLNSHVLSLDVNVNNSDDKEVTYKDAIMDKQELDTEFTGILVRTALGKLSGKHKEIIKLKYFQGKTQMQIAKLFGTSQTTIGRFEKEALTKLRRYVS
complement(4383626..4383832)       hypothetical protein; Clopa_4311                                                     N/A                 MANKFLPGLKYVFTKKNYIKRFGKKEYRDSKRWVNRANGGKVKVASIFSGDVRGFLVSPEWCKCIGKE
complement(4383825..4384022)       hypothetical protein; Clopa_4312                                                     N/A                 MGRKVNVDIDRAKALYEKYGTLARAALSLDCSPTHLKKVLVNAGVEIKSYKAEKWNMKSGGWNNG
complement(4384006..4384272)       hypothetical protein; Clopa_4313                                                     N/A                 MAKYKIYIDETRTLRHTVILETEEDIDKTLDQAQIGDCVHLYDVISALEDEGCNVNEVAEDDNGDSEFDVDEYEEIDESEGNVDGKKS
complement(4384272..4384634)       hypothetical protein; Clopa_4314                                                     N/A                 MKINENYKIEAIDERNVCIMERKVPKAELGKEPKKPYWKTEGYYPNIEFALKSLVTKEINGTGIKGLKTVTDKIKELHELIEGLNYKTAMELLEYKKKNKELEATINEMSERIIDLEACE
complement(4384865..4385074)       hypothetical protein; Clopa_4315                                                     N/A                 MFETKNIKNYNRLGSNAKKAFDSFLKRFYNAWEFPEDHKPIAVNMCKGFLKVDLNDGSWLHVTPSGEWY
complement(4385153..4385410)       hypothetical protein; Clopa_4316                                                     N/A                 MLTPRNFANKTGLSYNQVLTMCKEGELKTVKTNRGHFKISDIELDKFIKNDNCISKEKYEELIRENEKLKSTLEQLKKYIGSLSI
complement(4385404..4385622)       Helix-turn-helix protein; Clopa_4317                                                 N/A                 MLQSQIRKLRMEAGLQPEEAMEKLKISYSFLNKIELGDRRPGRDLIKRMSKVYGCSVDIIYNAIDEGVCQKC
4385812..4386150                   PHAGE_Staphy_SpaA1: XRE family transcriptional regulator; Clopa_4318; phage(gi399498895)     3e-09               MYGKIIKKLRKEKKLTQEDLAKLINFKSGSAIGMIEREERELNLEALNKLSEIFNVSIDYILGKTSEKFPGEIEETTKDLQTLIKSKLEKLPKDKKEKAIKDMMKILNDADK
4385972..4385985                   attR                                                                                 N/A                 TCAATGTATCTATT
4386211..4387455                   PROPHAGE_Oceano_HTE831: integrase; Clopa_4319; phage(gi23097608)                     1e-37               MKGTVRKYIHKDGTVTWGYLVYMGVDENDKKKYKRKRGFKKQKECEAALAKFITEIEKGTAVNNDKMTVKDYLEYWLETYPKNNCQPATYKRYEFFCRDIVCGLGNYKLTKLNPLLIQKFYEDLKNGTIKEQLKKQKLSELQAIYDKALKNSKEAKTLKDKLNKLKEQPIQGVSNNTIIKTHRMFHLALKHAQKWQLIFVNPCDLATPPTSDPIEMKYWEPDDISMYLDILKDDFLYPIIYLAAHTGLREGELCALKWEDFDIIEKTLTVNKTLQRINSVLKPKITKTKKSTRIVTLFDSTAKFLKTLKNKDKALKLETGLELEYIFHWEDGRPIDPNYVSKKFPFILSGHKIPQIRFHDLRHTHATLLRKLKVDAKVISERLGHADVAFTLKTYTHVNTEMQREEVAKAEDFL
