gi|378807379|ref|CP003324.1|  Mycobacterium intracellulare MOTT-64, complete genome. [asmbl_id: NC_000000].5501090, gc%: 68.07%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
811269..811280                     attL                                                                                 N/A                 ATCAGGTCGACG
811495..812409                     PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; OCQ_08200; phage(gi17975200)     2e-59               MLSEHGMPIAPRTFHAWATRAPSKRALWDATITQILAGCYEPDEQGRRKPESLYGSLKMWAHLQREGIPVAKSTVERLMRKNGWQGVRRCKKVRTTIPDPAAVRPPDLVDRQFAVPAPNLLLVADFTYVKLVTGIFVYVAFVIDAYAGAILGWEASASKHTRFVESAIRQAAALRRRQGHPIDGAIHHSDAGSQYTSVRFGETLSLSGIRPSVGSVGDAYDNALAETTIGLYKNECVRADSPFRRGKLNTVGDVEYITADYVAWYNQQRLMHRLGRIPPAEAETRYYSQLVTDQSAGSQNPEGA
complement(812462..813034)         hypothetical protein; OCQ_08210                                                      N/A                 MSEDEPSIDTADESADRTEGGETSAPPARRRVKVVPAILIALLLLSGGGATWLYFKQYRPDKQTDASVATAVVNAASDGTVALLSYSPDSLDKDFATAKSHLSGDFLSYYNQFTEQIVAPAAKQKSLKTTARVLGAAVQELHPNSAVVLVLVDQSTTSKDNPDPAMASSSVLVSLTRVNGKWLITKFDPV
complement(813031..813909)         PHAGE_Saimir_2: unnamed protein product; OCQ_08220; phage(gi9626029)                 2e-11               MAEAKEPPRDSATSKADARALLEEAEAEAAEAEALAAAARARARAARLRREALDEARKEAEAKAAEDKAAEEKAAEEATDTDGPKADDDVADTDEATDADEAETEKEEVSDETPEDAEPETEPARSRRRLRMPPLSVTWKVAVILLICAFVAASGYMMWNRHEVNERSQRIANFVAGARQGVVNLTSMDCNKAKEDVQRVIDSSTGQFHDDFQARAKDFTTVVEQSKVVTKGTVNAAAVQSINGDFALVLVAATSRITNAAGAKDEPRNWRLKVTVKNDGGQYKMSNVEFIP
complement(813942..814337)         hypothetical protein; OCQ_08230                                                      N/A                 MAALTIAPTAHADMLYSNYSVNSDRDPGHFWVWSINPCFPNQPGCLQIYATPQPNGQATVYRGEARLSNGRYTMAVDVPDGVRCVVQFFPSHDVYSWDAVTLAGQVDSTFDTGCGGGPGGTNSWPFTLVRF
complement(814486..815850)         cytochrome P450 superfamily protein; OCQ_08240                                       N/A                 MSVDDVVNDGDRKKNRYHFDRHSSEYRSQFKAITEEMHAKCPMAWTDTYGGHWVAAGSHEVFELARCPAVSNDHDIHGERRGYKGISIPTASRVSAVRGGILEMDDPEHRTYRTVLNPYLSPAAIKRWEPFIDDVTRACLDEKIEGGSIDFVDDLANIVPAVFTLAMLGIPLKKWNMYSEPVHAAVYTPEHSPDIERVTAMHREMGLDMVNNMIEIRANPRPGIVNGLLQMRIDGEPAPELEILGNLGLVIGGGFDTTTALTAHSLEWLSEHPEQRQLLSDERKTLLDPATEEFLRYFTPAPGDGRTFAEDTELDGTRFKEGERLWISWAMANRDPAVFHDPDEIILDRKGNRHFSFGLGVHRCIGSNVARTVFKSMLTAVLDRMPDYKCDPEGTVHYETIGVIQGMRKLPATFTPGRRIGAGLDETLEKLQRICDEQELARPITERKEAAVID
complement(815897..816094)         hypothetical protein; OCQ_08250                                                      N/A                 MKVWVDSQRCQGHTLCAMIAPDSFQLSDIDGSSSAIDEVVPADREDQVREAAQSCPEQAIMITED
complement(816152..816853)         PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; OCQ_08260; phage(gi116326757)     7e-14               MKTAVVTGGGSGIGLAVVQRLRADGLNVATIDLRPSDAEFTFTADVTDRSQVDAALSAIRAQLGPVTVLVNAAGLDGFKKFHNITFEDWRRVIDVNLNGVFHTVQAVLPDMVEAGWGRIVNISSSSTHSGAPYMSHYVAAKSAVNGLTKSLALEYGPKGITVNAVPPGFIDTPMLRAAEKNGFLGDIEETIARTPVRRIGTPEDIAAACAFLVSEEAGYITGQILGVNGGRNT
816942..817055                     hypothetical protein; OCQ_08270                                                      N/A                 MQHARETAFGLRREGLGGNFWPFAPLVSTSISFLRLS
817238..818683                     aldA_2; OCQ_08280                                                                    N/A                 MIDGRLVAAGKTFASINPATGAVIGHAPDAGAEEAEAAIAAARRAFDSTDWPTDVELRIRCLDQLHRALVEHADELRELTIAEVGATRALTQGAQLDEPIGIVRFYADLLRTYQFSEDLGERESRGMLHHRWVEKEAAGVVGAIIAYNYPNQLALAKLAPALAAGCTVVLKGAPDTPLVTLALGELIANHTDIPAGVVNVLSSSDPVSGVALTTSPDVDVITFTGSTEVGRKIMAAASQTVKRVFLELGGKSAAIMLDDADFANAALFAAFSMVTHAGQGCALTSRLLVPRSHHDEIVDLIAQNFAKVSHGDPADPKTYMGPLINERQRDKVDGMVQRAVAAGATLVTGGKRLDPGHFYAPTLLTNVDPDSEIAQDEVFGPVLAVIAFDDDDDAVRIANNSIYGLAGAVFSRDQDRALAVARRIRAGSFSINGGNYFGADSPFGGFKQSGVGREMGVAGLEEFLERKTFAVPAVPTKGAGA
818680..819885                     hypothetical protein; OCQ_08290                                                      N/A                 MRPLEGIRVLEVAMYGFVPSAGAVLAEWGADVVKVEHAVTGDPQRGLRQTGMLRVEGDPNPNIEHANRGKRSIGLDMSVPEGKEVLYELARRSDVFLTSFLPAHRNKFGIDVDDIRTVNPNIIYARGSALGPRGGEAEKGGYDMTAFWCRAGTAATITPAGMPGMIAPPGPAYGDTISGTNLAGGIAAALLKRERTGEPSVVDVSLLGSGLWSMGHTVALTKHLGQRLEAPPPGVHGAPNNPLVGLYTTSDGRYISFVMMQPTKFWADVCRHVDLPELADDPRFATVEEIAANTAEAVELLSKAIATRTLAEWSERFATLSGPWAPVQDTLQAVDDAQIRSNEYMVRAGELELVANPVQFDVAAPQTGPAPGFAEQTDEILMELGLDWDRIIELKTAGAVT
820258..821064                     hypothetical protein; OCQ_08300                                                      N/A                 MANKGADRWSPGIMLGRGSKPAQAIGGLFAMSADAVKFLFQRPFQWREFLEQSWFIARVAIAPTLLVAIPFTVLVSFTLNILLRELGAADLSGAGAAFGAVTQIGPMVTVLIVAGAGSTAMCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYAFSVFIQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMSLMVVNVVVTAIGIRFSAK
821165..821950                     hypothetical protein; OCQ_08310                                                      N/A                 MSRIGDHTLFYARALAGVPFATAHYRREIIRLIAEISMGAGTLAMIGGTLGIVGFMTLAAGGVLAVQGYSSLGNIGIEALTGFLSAFINVRIAAPIVAGIGLAATFGAGVTAQLGAMRINEEIDALESMAIRPVSYLVSTRIVAGMLAVTPLYSIAVILSFVASQFITVFMFGQSSGLYQHYFTTFLNPIDLLWSFLQAVLMALTVLLIHTYFGYFASGGPAGVGVATGNAVRTSLVVVVSVTLLVSLSIYGSNGNFNLSG
822089..823243                     virulence factor Mce family protein, putative; OCQ_08320                             N/A                 MATVAVVAVIVAVAVGLFRGSFTETVPVTVISQRAGLVMNPDAKVKMRGVQVGKVASIDPLPNGQAAIHLAMDPSQLHFIPGNVLVDIASSTVFGAKSVLLVEPAEPSAQRLHSGQTLQGQHVMVEINTVFQQLVSVLSHIDPPKLNESLGALAQAFSGRGPQLGQSLSDLDSFLARLEPSLPAFRHDLAVLPVVSNAYADAAPDLMKTASNATRISKTIVDEQRNLDALLISAIGLADIGNDVLSTNRQPLTDVVHLLAPTTDLTNEYAPALNCAFAGLVQITHGAPLSEPSINISASLTWGAERYRYPTNLPKVAATGGPQCVGLPKLPFNTAPPQLIADIGANPVNYGNPQLLLNFDGLKQLLYGPIAGPPRNPAQIGQQG
823240..824262                     virulence factor Mce family protein; OCQ_08330                                       N/A                 MRTRATLIKFATFAVVMAVLTAFLFFIFGQYRTGATTGYSAVFNDVSRLKPGESVRVAGIRVGTVDSVSLRPDKKVVVKFDADRNVVLTEGSRAAVRYLNLVGDRYLELLDGPGSPKRLPAGGQIPVSRTAPALDLDLLLGGLKPVTQGLNPHDVNALTAGLLQVFQGQGGTIESLFTKTTSFSNALADNDQTVQQLIDNLNTVIGTIAKDGKQFSGAIDRLEQLVSGLSNDRDTIGSAIDALDKGTASLADLLAEARPPLSGTIAQLNRLAPILDNDKDRIDTAIQKAPRNYRKLVRLGVNGATIPYYICQFGLRGTDLNGKTVRANIFRSDAGRCTEP
824262..825380                     PHAGE_Pseuda_granulovirus: polyhedral envelope protein/P10 fusion; OCQ_08340; phage(gi285002293)     7e-05               MLKYRGAGLVKAGLIGTVLAVMVILVGLSPDRFVAWATMVRYQALFTEAGGLAAGNPVIVSGMKVGTVSDVKLRHGDALVTFAMKGNVLLGSETSAHVRTGTLLGERMLAVESAGSGTMHPMALIPVSRTSSPYSLTEAVSDLTTDTAGTNTAALNQSLDTLAATLDQIAPQMGPAFDALTRLSRTLNSRNKNLGDLFKSAGDVTGVLSERSQQVNKLILNSDSLLQVLVARRQEIVDLLANTSAVAKQLTALVHDNESTLAPTLERLNSVTAMLEKNRDNIAKSLAGLKKFQITVGEAIAGMYAYQAFAPNFLIPQLFQELFDYLWGFRTFDTSKGPGFPSPVPRALTPWPYNSIPMCPGCTLGGRVGGSQ
825422..826804                     PHAGE_Emilia_86: hypothetical protein EhV364; OCQ_08350; phage(gi73852838)           7e-08               MTAVALVGLLLAGAAVVVRNTFFGQKTITAYFTTATAIYPHDEVRVSGVKVGTIKSIQPQGTQAKMILKVDHDVPIPADAKAVIVASNLVSARYVQLAPAYRDSGPVMRDGAVIPVERTAVPVEWDEVKTQLMRLATDLGPKSGVSGTSVGRFIDSAANALDGNGDKLRQTLGQLSGVGRILANGSGNIVDIIKNLQTFIGALRDSNVQIEQFNGRLATLTSVVNDSKSDLDAALTDLSTAVGEVQRFIAGTRNQTSEQIARLADVTQNLVDHHLDLENILHAAPNAFGNFFNDYNADTGTIVGGFGLMNMSNPTWGGQVLLSVPGCTQIGAIGNITSVETGKLCSLFIGPGLRQTSWNNSPLPLNPFISKSIDPARVLYTEPRLAPGGEGPKPTAPEIPPAVSAYTGLPGDPVGPPGAVPPARIPGAAMPLPPPPSTPAPPPPAPSASEMLLPTDGPQQ
826801..828087                     PHAGE_Emilia_86: hypothetical protein EhV364; OCQ_08360; phage(gi73852838)           3e-07               MIARVAARRVFTVGCCVVLTATGCAFHGLNSLPLPGAVGRGPGANIYHVELPNVGTMESNSPVMINDVVVGSVGTMRVHGWHADVEISVKRDVVVPANVVATVGQTSLLGSMHVELNTPLGQQGSGRLQPGATIPLSRSSAYPSTEQTLSSLGAVVNGGGLGQIGEVIHNFSAALSGHEGAVRDLITRLDTFVGTLDDQQDNIIASIQALNRLSATFADQRDVVTDALRKIPPALEVLIKERPRLTAALDHLRVFSNTANRLVNDAQADLVRNLKNLEPTIKALADVGPDFGAAIAASFVFPFTQNFVDRAVRGDFFNLHFDFDLTIPRLKKGLFLGTHWGQLDMPVPPVPGDPYRMNYTLDPLHNPLRPPWVDPDALPLPPPPPGAVPGPGNYGPRPGPAPAEAPMPDANLGQTPPPAEAPSTGAGG
828088..829827                     PHAGE_Bovine_5: large tegument protein; OCQ_08370; phage(gi296316024)                3e-08               MLTRFVRIQLGIFLVAGIIGVVAMVLFYIQAPTLLGIGRMTVTLELPATGGLYRFSNVTYRGVQLGKVTAVGLTPTGAKATLSLSTSPKVPADLTAEVLSVSAVGEQYVDLRPKTNSPPYLHDGSVISVRDTTIPQPVAPMLEQVNAMVQSIPKAKLGQLLDESFEGFNGTGYDLGSLIDSSKTLSRDANGVVDRTRALTEDTGPLLDTQAHTTDSIRTWARSFAGISDVLVNNDSHFRTILEKGPDTANEASRLLEQIKPTLPVLLANLTTIGQIGITYHPSIEQLLVLLPSGVAIEQAATGENHPDGRAYGDFAATVDDPPICTVGFMPPNTWRSPDDLSDIDTPDGLYCKLPQDSPIAVRGARNYPCMGHPGKRAPTVEICNSDKPYMPLAMRQHTTGPYPLDPNLISQGVPPDDRITVNDRIFGPVEGTPLPPGAVPRGDAAGPRGENPPPGTAGAAVPPMPSSGPTLAPMTRMSADIPAFAPLDVAAPGELPTPPPPPPVPALAPAPLDQVDGGQPQAAPSSFGANTSKPAPSVVVAKYDPHTGRYVGPDGKLYQQSDLVAQKAPKTWKDMLPT
829628..829639                     attR                                                                                 N/A                 ATCAGGTCGACG

#### region 2 ####
1064478..1064490                   attL                                                                                 N/A                 CAACCGCGACGAC
complement(1074034..1075569)       PHAGE_Ectoca_1: EsV-1-65; OCQ_10720; phage(gi13242537)                               4e-15               MTEDKAATSGIFPRWFPSSLRRQLLLGVLAVVSVVLVTVGIVSVLSLRGYVNAMSDADIAESLDAFSHQYTKYRNGEHTSTHPGTPPIGQAMLEFTGQTPGNLIAVLRNGVVIGSAVFSEGEPKPAPADVISALEGQTWSGGPPRTEILGRLGSYRLDSTVDGSDVLVVGMSQNLADRIIARKQITTIALTAGALALTAALTGWVVGYTLRPLRRLGAIAANVAAMPLADDDHRISIRVQPQDTDPQNEVGIVGHTLNRLLDNVDGALAHRVESDLRMRQFISDASHELRTPLAAIQGYAELTRQDSSELPPTTEYALARIESEARRMALLVDELLLLSRLGEGQDLQSEDVDLAAVANNAVNDATVAALTHHWVKDLPDHPVWVRGDHARLHQLVSNLLGNARVHTPPGVTVTTGITCHRDGPEPPFVELTVTDDGPGIDEELLPRLFERFVRADKSRSDGSGHGLGLPIVSSIVKAHHGSVTVESTEDETVFRVRLPLIDGPPRGVNKP
complement(1075566..1076339)       PHAGE_Ectoca_1: EsV-1-65; OCQ_10730; phage(gi13242537)                               8e-06               MTATAGYSGSQRPRQAILGQLPRINRADGSPIRVLLVDDEPALTNLVKMALHYEGWVVDIAHNGREAMAKFERVNPDVLVLDIMLPDVDGLRILERVRQSDVYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSLEELVARLRGLLRRSGQPPTPTAETLIVGDLRVDTASREVTRGDTAVSLSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSGREPMIHTVRGVGYMLRPAE
complement(1076567..1076851)       hypothetical protein; OCQ_10740                                                      N/A                 MSINYQFGDVDAHGALIRAQAASLEAEHQAIIRDVLAAGDFWGGAGSVACQEFITQLGRNFQVIYEQANSHGQKVQSAGNNMASTDSAVGSSWA
complement(1076893..1077174)       hypothetical protein; OCQ_10750                                                      N/A                 MTDPHEMRAMAGRFEVHAQTVEDEARKMWASSMNIAGAGWSGQAQATSYDTMGQVNQAFRNIVNMLHGVRDGLIRDANNYEQQEQASQQILSS
complement(1077351..1078505)       PHAGE_Equid_8: envelope glycoprotein J; OCQ_10760; phage(gi386522795)                5e-14               MVLDFSAMPPEITSSLMYAGAGSAPLMAAATAYANLAAEVSATATQWESIISLLTTEQWTGGGSAAAAAAAQPIVSYLTETATTLEQASAQATASAAAYEAAFAATVPPPVIAANRTLLATLVATNFLGVNSAAIAATEAQYAEMWVQDATMMAAYQASSAAAGVLTPVTPLTSTTDPARAAAVDNGAVAFDAANSTSQAAGLDLSSLITSPTSSGGLLQSIDNLMGTPSFLNATNGAVNTAAWWVCATIPNAVSLGHTLGSVPSIPFSLADSVAPAAGAAAITPGTTVGSVSGAGASAALGEASTVGRLSVPAGWNAAAPASSLASATAPLEGSGWTAAAEAEGVTAMPGMPGMAAAAKGAGAYGAGPRYGFKPIVMPKQVVV
complement(1078564..1079448)       PHAGE_Erwini_PEp14: hypothetical protein; OCQ_10770; phage(gi374531873)              5e-06               MSFLTTQTEEMLAAETLLSGINSNLAAQNTGAASATTVIAPAAADPVSAQQAAIFSAYGAQYQAIAAEAQAQLEKYSQTLGISSNSYGDTEAVNASQAAVQALDAADSGTGAATGSNPIDILAWLLGFNGQSSGGLGGMFGLSSNGANIGNIGFGNWASATSNLLGLAGGGLLDTSGDAAGAAAAADLATSTTPAGAGVSGVAGVGAMPAAAMGQATMVNKLSVPPSWAGSTPVAASSAAPLQTVGWTAAAPQTGAGTVVPGMPGVGAMGRNSAGFGAPRYGVKPIVMPKPAAV
1079799..1079875                   tRNA                                                                                 N/A                 GCCCCCATAGCCCAATTGGCAGAGGCAGCGGACTTAAAATCCGGAAAGTCTGGGTTCGAATCCCAGTGGGGGCACCA
1080617..1080922                   PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; OCQ_10780; phage(gi17975201)     2e-06               MRVARNRDDGVTIEQIDTDFGVHPMTLHKWMRQADIDEGAKPGRSTGESAELREARRRIKLLEQENEVLRRATACLSPANLPGKGSPRSGKSSPPTGSPSR
1080631..1080643                   attR                                                                                 N/A                 CAACCGCGACGAC
1080919..1081263                   integrase catalytic subunit; OCQ_10790                                               N/A                 MTCRVLKLARQPCYRWLANPITDAEIVEAYRANALFNAHEDDPEFGYRYLVEEARDVGESMAERTAWRICTNNGGGVCSARSAARTAKSGHLCTTTSSSVTSPQMHQISCGSAT
complement(1081888..1082928)       PHAGE_Prochl_P_SSM2: nucleotide sugar epimerase; OCQ_10800; phage(gi61806141)        3e-06               MSSILFRMEEEGERMKCLVTGSTGYVGGRLIPRLLAADHQVRAMARDPRDLDALPWVGQVDVVAADLSDPRFLEHAFAGVDVVFYLVHSMGSSINFSSAEAESARHTVTAARRANVSRLIYLGGLHPRTRELSRHLRSRSDVGDTLIGSGIETMILQAGVVIGAGSASFEMIRLLATALPVLPVPPWTRHLVQPIAIDDVLHYLLGAATVDLPGSRSWDIGGPNVLRYQDMLSDFAEEAGLPRRRFIPVPFITPALSARGIAFLTPMPADLIRPLVESLRHDAVMKDRDIDNVIGPPPHGLSTYRGSIQQALRHPPTTHHLDTPSADSDAAALLSTDPIWAHHGRN
