gi|00000000|ref|CP003331.1|  Vibrio cholerae IEC224 chromosome II, complete sequence. 1072136, gc%: 46.92%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
719863..719875                     attL                                                                                 N/A                 GCAGTTCAAGGTG
734221..735600                     PROPHAGE_Xantho_306: integrase; O3Y_17223; phage(gi21242250)                         5.11e-06            MTHQENLSNPQEVNKKVTKRSHYDSLSLSVFSSNPINPDCRNGINPHIRDTQKIYFTTLKKHNTFYLRVSQRAKQAQRAKQAHREHLKNESVTVSLRTESRREAKMRSDYLKDRLLEQAGSFIDFNHMRETLKEIAKAELLRRPKVDWFYRGNIIVAQEALQEAQTVEQVRFIQSYSDIMKKGLQSDTEGLLSIIDSVDSEQSKHSEPQDHKEHKEHKESLTIDELIDNYIADKISSGEWMESTKEKKGAKLQHLKTIFEACSLKDKPIDKLTRNDLLEVRTALINRGLKTLTVNGYMQDIRAIFNNAEALGLIGKSPAVKLNIKDRDIKEPKALTESEVIALIDYFKHGYFTEARRSKKTLEGMKYLKWVPQIAAVTGARLNEILQLRKGDIRQSANGLCWYIDINDRGDNVVKNKSSNRIVPLVDGAYGFDLELFLSEIVNTCNEDSDNIFRLVVVN
complement(735593..736465)         PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; O3Y_17228; phage(gi41057343)     2.35e-145           MIIKKLKQSHSVKILCEVFNVHRSSYHYWLKRPALINAETIKLRSLISEAHAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRKASQEHIDVPNHLSRQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFARKVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHYTSRKYRQLLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEITRYIIGYYCQLRPHQYNGGLTPNESERLYWENSKTVANFS
complement(736462..736806)         PROPHAGE_Xantho_33913: ISxac3 transposase; O3Y_17233; phage(gi21231087)              2.99e-08            MISSPHKLTGDIMTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAMNVGKSTMDKWVRQLREERQGKTPKASPMTPEQIEIRELKKKLARLEEHNEILKKATALLMSDSLNNS
736883..737365                     PHAGE_Shewan_1/40_NC_025470: Rha-like protein; O3Y_17238; phage(gi722121079)         8.19e-05            MNKKEIQAYQSAFEKFNPFYGVDFPITSVKLCELINKMRNDHNEKVVELRHDHLMNKIREFSEQVNAPNFRVVESSYKDTKGEDRKCYLLGKTECRAIAATESKSVCYMIMVYLDQLEQIFEKAKEAKATEFDRKLSKQGVTWREACRTVGIEHPDLALK
737366..737659                     hypothetical protein; O3Y_17243                                                      N/A                 MIKRGFFKRDFDGGLVVKPSLLADKSFKKADNLGINKEGFRVLTNGFKKLQEAAERIKWQCLQFSDRPKLQAMYKAKLEEHMKNQPKVYDEQGFEVE
737874..738830                     PHAGE_Ralsto_RSM3_NC_011399: hypothetical protein; O3Y_17248; phage(gi209901327)     2.75e-21            MFINTIDNKEHIIHYEHILKSTHTVNEVNTVSEVDAMKYSLIKLSAMNSYSDCQQAIEDIEADPENYTTETRAAARIGGHCELLKGAKEKIKALEKKADSFIPSDDSEEVNTVSETSQRTYGYGRVSTDEQTTSQQLTAIREAGHKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKLEKGDTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATFAEFEKNRISERIRDKLKQLKQEGKALGRPTKNVYDDVQELKAQGISQRTIADKLNVSLSTVRRNWVDTKRSLEVVTESGQ
739068..739289                     hypothetical protein; O3Y_17253                                                      N/A                 MNNRLVEETIAEETIDCCPLCQHDEFFISADKEKFYCAKCGFHTNTLTSIQPMLAAKANLTHRFVHTGIKTRQ
complement(739485..740165)         haloacid dehalogenase/epoxide hydrolase family protein; O3Y_17258                    N/A                 MTESRVKCVIFDCEGTLVDSERLCCEALVQVFGELGVALSYQQVAEHFSGGKIADILHAACQLAKITADIDLLEQRYRSIVAATFRRKLSPMGGARALLNYLKRNQIEFCVASNAPREKIAMTLTLAGLEHYFEGRIFSAFDANSWKPEPDLIRYCAMNMGFTLDECIYVDDTPKGVEAGLNAEVLTFQLSPLNPQHRSHSQQVIVLSNLLQLAEYLSGSVMRQSA
complement(740304..740810)         hypothetical protein; O3Y_17263                                                      N/A                 MIYSPSPVVAAKNQWLSSQVDVEFPTAQSLEGRDIYHALSRHTEVSLFQPQACDAPLLQEIYLVDFHRLTVWFALLQATRSSTQHEQERLVEFFTQIIYSPPCQLFLGFHLGEPVAAGMVTEHEHMVLLSDLVVKPNPLFDTREAFAQALYAKWQAITASDATPYIEL
741132..741614                     PHAGE_Aeromo_phiAS5_NC_014636: hypothetical protein; O3Y_17268; phage(gi310722759)     6.03e-09            MLNSIRTALLLSFAFVLSGCDRSEVGDVSLGMFTLKDIKINNLTDPVVTGVTCHVASIEADLSLADPSDSSISCRQTGEITPEMIAQIDKSSSGEVVFQKSKSIFFKSMKIRRIFDAKNQTLMYLSYSTKETSGSFKHSLSTVPLWGTQAYNAFPETQNK
751479..751491                     attR                                                                                 N/A                 GCAGTTCAAGGTG

#### region 2 ####
897688..898809                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; O3Y_17928; phage(gi371496158)        8.54e-33            MASVTLKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDLYIGEQRMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAEILQLSHLLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKLQRKLGCTMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFIGSPKMNFMSVFIEGVEKDRVQVQLSNGTTFWIPVDGTTVTRGERMSLGIRPEHLVEAEHGDAKIEGKVMIVEKLGNETQVYMNLKGSDSDVIYRQPDTLDVETGDTLTIGIPAHRCHLFHSDGRACRRLHKEKGVDLPA
899032..899553                     PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; O3Y_17933; phage(gi9630137)     2.10e-11            MNSQLTLRALERGDLRFIHNLNNNRNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQKNLIGLVELIEINYIHRSAEFQIIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGHLVEEFFINGRYQDVKRMYILQSKYLNRSE
899558..899803                     transcriptional antiterminator; O3Y_17938                                            N/A                 MVSCSQYDYIELACLFHLPVKLTMKSGEVYYGVAADTQRNSQKQECIALRGEEETWLLETDQLSSMEALSEQPHFSVIHFK
complement(899941..900549)         PHAGE_Cyanop_P_TIM40_NC_028663: hypothetical protein; O3Y_17943; phage(gi966198291)     1.19e-05            MALDGLMDAIADRGWYVWDDFLNPQEVQALRECIPERWKRAKIGRNEEIQRAADIRSDKIQWLDLSMGQPVQDYLERMEQIRCEVNRHFFLGLFEYEAHFAKYEAGDFYLKHLDSFRGNENRKLTTVFYLNENWTPADGGELKIYDLQDNWIETLAPVAGRLVVFLSERFPHEVLEAHADRVSIAGWFRTNGVSGNKLDIAN
900765..901085                     PHAGE_Rhodov_RS1_NC_020866: hypothetical protein; O3Y_17948; phage(gi472342875)      3.81e-19            MIVTTTPNIEGKRIVRYCGVIAGEAILGANIFKDLFAGIRDIVGGRSGTYERELEKARAIALEELQQHAVALGANAVVGIDLDYETFGKANGMLMVSVSGTAVVVE
complement(901252..901926)         PHAGE_Altero_vB_AmaP_AD45_P1_NC_021532: hypothetical protein; O3Y_17953; phage(gi514051613)     4.30e-06            MKDENKLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGIEEVNS
complement(902504..902782)         PpiC-type peptidyl-prolyl cis-trans isomerase; O3Y_17958                             N/A                 MARTAAALHILVKHKEQADDILAQLKKGAKFHVLAKKYSTCPSGKKGGDLGEFRQGQMVPAFDKACFQGEVLTPQLVKTKFGWHVVKVLYRT
902957..903877                     two-component system, chemotaxis family, response regulator CheV; O3Y_17963          N/A                 MAKVVSKANQSQGMLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAAAIGFRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTGITRFQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQLSDALDSINIPYHICKNGSEALDLMRDMARDHRAIDILVSDIEMPGLDGYELAFEMQNDPQLNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAMLRGAKKLQTQRLQKS
complement(903953..904477)         transcriptional regulator; O3Y_17968                                                 N/A                 MDSVQKSVMEWANELPELNTLPMSVLHRLQRLARRIELKMEAFYQQAGLTAGEFEVLMTLRGVGHPYCLNPSDLQVRLLLSSGAMTNRLTRLERKGLVERNLSRYDRRNVEVTLTEAGRQRIELWLPEYCDLQSSLLAKFSEVEQETLSTQLQEWLSHHEQLWCIPDLLNSRQR
904649..905665                     PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; O3Y_17973; phage(gi100150)       1.87e-18            MTTEDFKKSTANLKKVVPLMMKHHVAATPVNYALWYTYVDQAIPQLNAEMDSVLKNFGLCPPASGEHLYQQYIATKAETNINQLRANVEVLLGEISSSMSDTLSDTSSFANVIDKSFKDLERVEQDNLSIEEVMTVIRRLVSDSKDIRHSTNFLNNQLNAATLEISRLKEQLAKVQKDALFDSLSGLYNRRAFDGDMFTLIHAGQQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRVMPL
