gi|00000000|ref|CP003490.1|  Brachyspira pilosicoli B2904, complete genome. 2765477, gc%: 27.79%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
2009470..2009482                   attL                                                                                 N/A                 ACATTTATTATCG
complement(2021058..2024531)       PHAGE_Clostr_phiCD119_NC_007917: putative tape measure protein; B2904_orf1958; phage(gi90592653)     7.09e-39            MSSLNVSIYADASQAIEAFGKLKDRTTDLEKGFNKIGKAFSNFGSLATKSLTVPIVASTTAMGLASKKAIEFDNGMREVLTLLPELGNESFEKLKNQALSFSKDIGKAPEETVKALYQALSAGIPRENVFEFLKTAGEASIAGVSDLRTSVDGLTSVTNAYGSEILNAQKASDIMFQTVKLGKTDFTQLSNNLYNVIPIASAIGVQFEDIGAAIAAMTAQGVPTSVATTQMKQALSDLNKEGSVTYEAFKQISGESFKDFIAGGGNLQEALQMMSDYAEKTGKEVTSMFTSVDAGNAVLALSGKNASKFKDYLDQVRNSVGATSEAFKKIDDGAARQFERLKAELSALVIELGNNALPLINESFIPLFRDTLVPIIDDAIKTISSLIKAFNNLPAPLQATTVGIIGITAGLGPALQGIGSLRKSFVETKKIINDFKGAIGSLKTSVSSIQALSTVWKGFNTVVLASPVGVVTALTAGLGALALKAYKLNQEYKQLIESSQKLTSSTKELNDNAFKDLGLFQEYQKLASSKELDAAATERLNQVTEKLTRLYPNLKTVVLDGITYIDSATMKLEDYRTAEEATNIQTIESTIKELEKQRKIYQKALEGWKQSLYAIGADDNYIQRELDLGNSSDYNELKKVEDTLAKLEKQRNDLNQNMQLRQSLTRDGIDLETKEQKANQKSIDAIKKKSDTVKEHTKTYEDYLKELKKAEEDETRRVKNLNALGAEISDADALEAKKNKVSSILTEMSTALNLNANQIKYLSHNYGYAFDSIKTDRFDELVKEIENSITAYERNVEVAEEFGEKISEAEREGAKSEIVRSGIESITNEIKLTNEQVEILKQKFGDLWKVNTLDFSSYFASNWSNMFNDVADNMSDLYTAVQDLKIQAIEFEIDKTEERKELALKAIEEEKAARLEALGIMENSQKQSLLNEIKQLKNRQNVALGLYEQERIKAELEEKQKELSKIQIEEEAKAKQLEIEKNYNNEKMRLEYNSRLENWKMSLAQGTASMAQAGINALASAMAVPFPANLVAYATLLGVIAGGTINLVKLGQAKPQEPKYLARGGVVERRQGGINAVIGEGANDEAVIPLEDKILSKIGSSIFEATANNDQSYSVKDASDDSYNQPICLMLDGKIVAATMLNLSKRGVKVVSQRGIL
complement(2024788..2025147)       hypothetical protein; B2904_orf1959                                                  N/A                 MEVTIVDLEEFTKKKAVYAKLGDYKINVNDVPVQVALKVNEYHNNIRTGESVDIGLLIDEVVIPVIKRTNEDLTKEDILNKFSYDQIMKVMNMIFDCFFSAGTEPKKEDNKKKVKSRIN
complement(2025172..2026260)       hypothetical protein; B2904_orf1960                                                  N/A                 MSQTYVQNKRTIRTGSAKLLIGDRFDKLVDIGAARSIALKETITTADIESDNAGVVNTLTTEHKMEVTLDSLEINFEKYAMTRGGIDNIDTYDGKTEITKAYIVGSDTYKRGEEIKVPFKNADGSDVTITKVEKKSSTGNVLIEETSYEKIGTNGIKITDNNISPSTDTLVITYKRIMPKMVRMTTGGKSSIVKPKCIMLVNTNAEGKELRVYLPQAAITGGLEFSFPADKSQDVLVGKLSFSASTSGSQESGEQLAWYEDEQSVSNDENETIIEPLTLESNKQNVDISGTGSDTVVLTSNADEIKYAVEPSEQGFCDISYEEETKTFTITGKTPGQATLKITAKKAGSEDKTLDIVINIQE
complement(2026272..2026640)       hypothetical protein; B2904_orf1961                                                  N/A                 MIENAIYTILKELTEDKADGVYLDFVNDSTIDKNKTYIVYSLISSTPHYNFEYGRNVYQIAVYSNDLSKALNIQRDIGKHFSNLIDIIEDTEICGCDVSNETHSYVEGFYQAISIINILYKY
complement(2026637..2027107)       PHAGE_Cronob_ENT39118_NC_019934: hypothetical protein; B2904_orf1962; phage(gi431811071)     8.08e-07            MSGVSRKTSISIQGLDEFRKTLEELGGDFKKAIKAGARKAGNEIAKEANAEAKSRGWTEDKYYDVKEKKSSKGSDTSVAIKVGTLEVSGTGAPSKNKIIWYKKKGDRYYVRFPEFGTATQAPQPLLIPTFEKKKPVIEQYIKESLQKAIDKANKKK
complement(2027109..2027450)       phage head-tail adaptor; B2904_orf1963                                               N/A                 MKVGKLIHTITFYTSTYIDNGNGTGNNELVELKKVKCSIEDITYKDIEQGKRKDLESTLKVHTHYFKEFDTKGMMAKINHEDDIYEVIYRENVSYKNIECIFTIKKLVNNKSG
complement(2027447..2027812)       putative DNA packaging phage QLRG family protein; B2904_orf1964                      N/A                 MSSKPEDINENIDIDVSSVVESGDDDRVVTLSEFKKFLNLEGIDYDDDILQLTLDSAISYCNKANETEYKRIDCPPEVRYAILGLAAHYFETKTGEASQSEDVALKGVHRLLTIARENITL
complement(2027839..2029140)       PHAGE_Azospi_Cd_NC_010355: Phage major capsid protein; B2904_orf1965; phage(gi168495136)     1.06e-24            MTPEDLRTKIANLKSENASDLTKVEDLISQRDLYSAMSLEERANKKEDISKLDNDIDTLMQNIENRNKEIERNDKLLSLQTKSSMNKRNIVDDLDSSTANNDTELRDKVTRWLRTGDDKEVREELQAGVAEAGGNTIAPQYLVKDIIKGLDLSVEVRKRAYVIPAMNGYASIGIPTLENDFDDLDWTPEIGEVTEDKNMSFGKREMKANQLTKLVKVSRKLIRDSNIDVQKLVQERIAYKLSSTLEHNYLYGNGTGKPLGIFAQTSDNSSSIPTDRDIAVGTTTAAITYDGLVDAVSGLKSGYQHGAVWMLNKKAVAALRKLKDKQDRPIWNESLQAGQPSMLLGIPVVQNDFIEDKLESTKYFGFLANLSHYWIMDSLSMELQVLYELYSATNQVGFQVGYYGDGAPVQKEAFVRLVAHDKPFAKSVAESAG
complement(2029150..2029773)       PHAGE_Clostr_phi3626_NC_003524: putative prohead protease; B2904_orf1966; phage(gi20065968)     1.81e-32            MPANNSEIRNIDIRFENNTEDEPLKLRGYAIVYNALSEPLYGDLFRERIKSGAFTKSLAQDDQVCLWGHDTRYVLGRKSAGTLFLREDEKGLYFEVELPNTTWARDLKESVNRGDIKQMSFGFKVKDDEWIDDEDIIKEYGMPIREVKEIVLHEISLVTFPAYPQTNVRDKNDIYVPKPPIKITDDGFEDRTITYNQKINLLKIKNN
complement(2029757..2031052)       PHAGE_Psychr_Psymv2_NC_023734: phage portal protein, HK97 family; B2904_orf1967; phage(gi593779762)     1.51e-64            MAVFKKISNTITKWLFPDFSHFNGSNFLSIQNDKTLSAVNPNTALTFSTVFACVRVIAESIATLPLFVYEKNGNNKTKAINHPIYSLLHDAPNDECTSVSFIESLITQILLQGNGFVEVVKDNFNRVTELYLIDSNKIKVYRDSSGNKMFEYYDDGQIITMSSAQVMHIAGLGWNGIIGYSPIGMMRKQITTGLYQDNFALNFFSNGVKKVPIITHPQTLSKEAKNNLKESFREAWDKGIVVLEEGMKVEPITMNLSDAQFLESRRFSVEEICRVFRVPPHLIGDLSRSTNNNIEHQSIEFVTHTIRPWCVRIEKALNSYLLSSLERKKYYIEFNLDGLLRGDSLKRQQANQIKFNNGVLNRNEWRQMENLNEVADEYGDKYFISQQSRLIEDIEGAISKDETSEPIDKEDFNINDKNKKIEKESKDASKQ
complement(2031123..2032034)       PHAGE_Lactob_LBR48_NC_027990: putative DNA methylase; B2904_orf1968; phage(gi937456738)     4.87e-67            MFRKVVIGNCTLIKGNCENVMEELESNSVNAIASDPPYLYLKHKLDIPFNEDKVFGEWKRLLKDNSMIAFFGRGDAFFRWNLILEKLGFKFKESAVWEKENASNYLNNFLRIHEDISFRSLGNANLRKEYIDYLEYQINKNKLDRIIDIWKGLKSALNGRDKDDVIKYIETGIKEFNYESKRKYEITARKHQGAKRGVNLFQSVKVGKIETSIMRCNREQYKYQHPTQKPVALMERIVKLISNENDTILDPFMGGGSTGVACINVNRKFIGIELDDEYFDTAVNRINKAYQDKENELNNEKAA
2032132..2032560                   PHAGE_Burkho_phi6442_NC_009235: gp1, phage terminase, small subunit, P27 family; B2904_orf1969; phage(gi134288627)     2.59e-07            MPEKAKKAQKNAQNKPKKALKIPNPPEYFCGYSLKKWNELAPIFVEKNMLNGADLSAFELLCLHYGDAMNLYEAMIDEGGSIAGYLAGKNSQTMGEYLAYHKAITAYTKMLTEFGLTPASKKKVPVPEIVDTDDPIERLMNG
2032566..2034338                   PHAGE_Psychr_Psymv2_NC_023734: terminase large subunit; B2904_orf1970; phage(gi593779761)     5.08e-94            MYSYEEYINKVINKELPVCQAAFLAVKRHLDDIEKSKNNDYPFYFDEDEAKRPITFIQSLVHTKGEWANHNIILESWEQFIIASIFGWRRKENKLRRYKKAYVQVSRKNGKTTFASGIGNYCFFCDSPAEAGVEIYYIATKKDQAKIAWSESERQIRKAKALNKEAITYKQTSTITKKKDTASKSKPLGQDSNTEDGLNPHLVIVDEYHAHPDNELLNVLESGMGARRQPLTFIITTAGFDKTSVCFSEYEYAKQILQGSLNNDEYFCIIYEPDNIKDIWIFMSEYKEKLNNNQNTQEQEELINNIIFQANPNINISVKDSYLKSRLFEGLDKPVQRTDILTKNLNVWTQASEVWISSDRWLKSYLHQNININELKGKRACIGLDLATTRDIAAYVLCFDTVDNDPYILLPRFFMPKENIRQRSKEDRVPYELWASQGLITLTNGDIIDFDIIESSILQDAKDFEIIEIAYDPWKAIEIITHLESEGFKMQQVRQSFAVGGLSEGTSLFEKTIDERKLLHGNNPVLNWMISCCEVKTDGRDNYLPVKPDRRRSYKRIDGVVASIMALHRVIKNHFEDTKSIYESEGVFSL
complement(2034396..2034794)       hypothetical protein; B2904_orf1971                                                  N/A                 MNKQLKKELAAIKSNNEEATKEIRKLLNNNNLFADIREYDAAVYIEYYINGKRKRIEIIGANIKDNKTVCNYPIYSTYINDETNEDIMGYYAVLLKLSSKILEKKTIRNKINEILDRYMNKIKYEIDNSKVS
complement(2034935..2035309)       hypothetical protein; B2904_orf1972                                                  N/A                 MNKELEKALAIIKSNNKEATKEIRKLLNNNNLDVDLTKYNAEVNFNNEEILRTDKDRDGNITSSFRVYSMRVDSNTSDDIINNYADFLELSSIMMRKETREKINELLGYYIRKTEAEIDNLNIA
complement(2035475..2035864)       hypothetical protein; B2904_orf1973                                                  N/A                 MQISNQEKEELLNRKYKETKENIKVKISNILTGIENINIEITPFDIIVKIKDEIIIRASLDIHKKISIKYSYEKIYLTDNIDDVKFDLYRNIFNAFDLLRKDNIKNKVSKILEEDIFIFHDFIFDTLAA
complement(2035926..2036132)       hypothetical protein; B2904_orf1974                                                  N/A                 MINLTLFLSDYQQGSDLLKEGDYSSAIIRFESLIEMLDNNKDTISDYKELKECFNNNIEGCKLLMKGF
complement(2036242..2036448)       hypothetical protein; B2904_orf1975                                                  N/A                 MVNLKELFIIHKKAFKAFEDKNYNEASFQYKVLLTLLEENKEYINDYADLKLSIESNIELCNKIENFF
complement(2036474..2036695)       hypothetical protein; B2904_orf1976                                                  N/A                 MDTKRTLEDAKKELGNNFLLLKNKNTILLFERDEYAMYKKNVWCQVFTKNGKFKYYWLRTNDLRLYKRLHDQL
2036869..2037141                   hypothetical protein; B2904_orf1977                                                  N/A                 MNDSRNSVTINFNQDLYRWIVKMVKNSKADPFNYSNATFGGFVQACVAKAKKEYEEKGSEMQKLKKRVVELENKVKRIEELENKIKELEK
2037553..2037666                   hypothetical protein; B2904_orf1978                                                  N/A                 MLSIITAIISIITLCINITILIILFKKGNTNGNKEKR
2037644..2037868                   hypothetical protein; B2904_orf1979                                                  N/A                 MEIKKKDNRGGARANTGGAREGAGRKRITNNRLDIKLYIRVSEKEQSLIKEKAEKNNVSVSQYIRDIVLKELNI
2037881..2037893                   attR                                                                                 N/A                 ACATTTATTATCG
complement(2037908..2038837)       PHAGE_Bacill_Stahl_NC_028856: hypothetical protein; B2904_orf1980; phage(gi100097)     1.81e-05            MASKKKNQLILPHNNNIITEEQAELLTKQANYLNILDYMKEEQLIKQIDYETEKENFFKQCSKTKSNHTKRQYKNGLNKLEEYCSMNNKNILFIKAREADDFITEVNSSELSNLSIRALVSSCSSFFSFLERRYPFIKNPFRGTKTRPPVKNKKRLEVPTKKEIELIIKDISDPLIKMAIIFIMECGVRVGALPKLEIRNNKYYSYSKGKEISWKVTDKVIKELKKNNITFNAPFKNKSSEVIRNIFYRSSKRLYEQGKIKAAYSIHDIRHYFAVTLYKQTRDIELIRKALNHSNIAITGLYLRSLEVE
