gi|00000000|ref||  Corynebacterium pseudotuberculosis 258, complete genome. [asmbl_id: NC_000000].2369817, gc%: 52.10%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
458581..459255                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; Cp258_0425; phage(gi16129761)     7.79e-13            MLVLALDTATPDLIVGLVRVTSDTDTGVVVAQRILTDSRQHNELLTPTVVEILEESGQKFADIDRIVVGCGPGPFTGLRVGMVTAAAFGDALGIPVHGVCTHDAIANQLDGQALVATDARRKEIYWSLYSDGVRTMGPGIVAPTELSIPSRISTVSIPEKLGQLLPGPLRDVPQVNLRPLPECLVAVADFSQTPEPLEPLYLRRPDAKEPAPKPRSSAIPKVEI
459256..459747                     Ribosomal-protein-alanine N-acetyltransferase; Cp258_0426                            N/A                 MFLRELTAADAPRCAELETLLFSEENPWSVEDLRAAINHSHTLYIAVVDSLEKGLILGYAGLAMLGPAHDPEFEIHTIGVDPQFQRQGVARLMMDNITFVADRAAGPVFLEVRTTNEPAIRLYESYGFERQGVRKNYYQPSGADAYVMMRTPSAVESNEESGK
459728..460804                     PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; Cp258_0427; phage(gi16130960)     6.19e-75            MKKVENNMIVLGIESSCDETGVGIIELSPDGSMRILADAVASSMEEHARFGGVVPEIASRAHLEAMVPVMRQALDAAGVDKPDAVAATVGPGLAGALLVGASAAKAYAAAWDVPFYGVNHLGGHVAVANLEGEELPHSIALLVSGGHSQLLEVQAVGKPMKELGSTLDDAAGEAYDKVARLLGLGYPGGPVIDKLAARGNRKAIRFPRGLSRADDLRGEHRYNFSFSGLKTSVARYVEKAEREQSVISVEDVCASFQEAVCDVLTHKAILACQDTGAKVLLLGGGVAANSRLRELAAARCQTAGIELRVPRFKLCTDNGVMIAAVAAQLIHEGAPQSGLRIGTDTSLEVEIPLVYAAT
460873..461262                     PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; Cp258_0428; phage(gi100016)      4.85e-07            MYSHSCSPATTAVLEFSQPAQRETSFYGRYIVANVNIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRFDGDDRVPMDIKEGDTVVFSKYGGTELKYNGEEYLLLNARDVLAIIEK
461274..462896                     PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; Cp258_0429; phage(gi526178751)     3.11e-96            MAKLIAFNQEAREGILKGVDTLANAVKVTLGPRGRNVVLEKAFGSPTVTNDGVTIAREIDVEDRFENLGVQLVKSVAVKTNDIAGDGTTTATLLAQAVITEGLRNVAAGANPVELNRGILAAADKAVEKLGERAAEVASAADIANVATVSSRDAEIGDMVAAAMEKVGKDGVVTVEESQSIESYLDVTEGVSFDKGYLSPYFITDTDSQRAELDDPYILLVRNKISSLPDFLPLLEKTVEANKPVLIIAEDVEGEPLQTLVVNSIRKTLRAVAVKSPYFGERRKAFMDDLAVVTNATVVDPEVGINLNEAGVEVFGTARRVTVTKDETIIVDGAGTSEAVENRRQQIRREIENTDSSWDREKAEERLAKLSGGVAVIKVGAATETEVSERKLRVEDAINAARAAAQEGVIAGGGSALVQIAKELRVYAEEFEGDAKVGVNALANALSKPAYWIADNAGLDGAVVVSKIADLPNGEGFNAATLEYGNLIEQGIIDPVKVTHSAVVNATSVARMVLTTEASVVEKPVEAKPQAGGHHHHHHH
463574..464164                     PHAGE_Bacill_Blastoid_NC_022773: RNA polymerase sigma-70 factor; Cp258_0430; phage(gi568192089)     4.34e-05            MRMMEEKGLAVAETETELSSLVPRAAGGDSRSLQRVISIIYPKVLSYARIRLSGGRHPTPEDVAQEICLAVATSISKFVDQGKPFMAFVYGIASNKVADAHRAYSRDVANPTEDVPETEVELETPESFALVAAGSNRVKELLDLLGDKPREIITLRVFVGLSAEETAEIVGSTPGAVRVAQHRALATLRKALEQEN
464167..465048                     Hypothetical protein; Cp258_0431                                                     N/A                 MTERRWARDGVEAAQSVEQLQADDQFLTHLSQGVDPTDGQDPLARLFLDARAEIQTNVPQAPTLAMLGLGSAEEFPTGELAPVTNESVDSSQLTDAPAAKVIELPRRRWNNAFAHALVGAAAATLIIAGGGTAIYNAGEGSALYALNQKFFGQTTNTEAVVALASKLDQANDLNAKGDKEGARQLLEQARELVNMLNARDRAQAEERIKEAERGSNVAPVPPPAEPEASSETVVTTMTTTVTETVTVEPTPARSTSTAPSTDRSATSSTSPVASTPSPTPAFELPQPEHSQAH
complement(465062..465472)         Hypothetical protein; Cp258_0432                                                     N/A                 MLRQINMVKHVNFDWQMPRDPFADDPNDPASFLDEDEPLPPLSEAEKRHIEEDLRLVQRFKKVLQPRGINGIFFLCEDCNEEHYYDWDIMMENIRATLNGELSPVHEPSLNPNPQAYVPWDYCLGYLDGLEAPRFF
465612..467132                     PHAGE_Bacill_G_NC_023719: gp120; Cp258_0433; phage(gi593777579)                      7.53e-34            MTQQRVSTGGDNPDKVALVGLTFDDVLLLPDASDVIPSEVSTSTQLTRNISLNIPIISAAMDTVTESRMAIAMAREGGMGVLHRNLSIEEQAQHVETVKRSESGMVTDPVTCSPDMSIAEVDALCARFRISGLPVVDDNGTLLGICTNRDMRFEQDFSIKVSEIMTRMPLVVAEEGVTKQQALNLLSANKVEKLPIVDKQGKLVGLITVKDFVKTEQYPHASKDSTGRLLVGAGIGVGEESWTRAGALVDAGVDVLVVDSAHAHSSGVLDMVSRVKKEWGDRVDVIGGNLATRSAAKAMIEAGADAIKVGIGPGSICTTRVVAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDLAKALAAGASSVMLGSMLAGTAEAPGEIVVVGGKQYKRYRGMGSMGAMQGRGLSGEKRSYSKDRYFQADVKSEDKLVPEGIEGRVPFRGSIEAITHQLVGGLRASMGYTGSATINDLWNARFVQITSAGLRESHPHHIQQTVEAPNYH

#### region 2 ####
1853350..1853658                   PHAGE_Strept_R4_NC_019414: putative scaffold protein; Cp258_1679; phage(gi414089993)     1.40e-06            MSEVERLQADLEAARKAEETARAEIAKRDLDEERSKLAAEFKLPAAMAGRIAGATPEEMREDAKALAEAIGPHTGPADKSAGRGSTNASPFDLNADIAAHYN
1853673..1854323                   PHAGE_Gordon_GMA1_NC_030902: hypothetical protein; Cp258_1680; phage(gi100006)       4.11e-74            MAPITLEQAKLNTMEDYDPAIIDEFRKSSTLLDLLTFDRAVSPAGGGATLDYGYRRVKTERGAAFRKLNSEYKTEAATTEKHSVTLAPLGGAFEIDRVIAKLGPAASGEIVFQMQQLIKSTTTKFLDSVINGDTGTEADGFDGLNKALLSTSTEVKSEADWTKFTSADAGMAVLNDLDEFLAVLDGPPTALLDNGHVLATFLRTRGGSPIEKSAKP
1854364..1854741                   PHAGE_Gordon_BetterKatz_NC_031247: hypothetical protein; Cp258_1681; phage(gi100034)     4.86e-10            MTSYTAKAFREEGWWGVQLIERPNILTQTRRLDQIPDMVRDALKLFPEIEPHPETVTINVVVVGDIESQVAKTLELRNRAAKAQEEATASMRSTAKALHDQGLTYRDVGQLLGVTHQTAKNLATA
complement(1854836..1854961)       Hypothetical protein; Cp258_1682                                                     N/A                 MFFCSIHDVNPPGIYFFGVAQNPITFTELLPIGWTEKSVTD
1855398..1856033                   Hypothetical protein; Cp258_1683                                                     N/A                 MKKSKLFLCMALTTSLATASIPATAQESDPTVKEWLHEKCEGFSITVQSVHLKDKDQSRVPQWLRAKPNLGDTVKVQFKVTNNSYSDNAHSPHRKDDGNAYLVYDPLSVRNGVGVTIKPNPIYAWSNPDKNKNFILGRGDSVTVTYNHTITEQDLANRSIPDGPNYPISNSGTATPVCTISPGITYNWSPLSHFFPWLAGFLRSITSFFSR
complement(1856231..1857952)       PHAGE_Flavob_6H_NC_021867: cytochrome c oxidase subunit I; Cp258_1684; phage(gi526120183)     8.20e-13            MTAVAPRLEDYSEPTRPAPTGGARKGTLAWKMLTTTDHKQLGIMYIIMSFVFFFLGGLMALLIRAELFSPGLQYLSNEQFNQLFTMHGTVMLLLFGTPIVWGFANYILPLQIGAPDVAFPRLNAFGFWVTMIGAAAMLSGFLTPGGAADFGWTMYLPLADSIHSPGIGSDMWIVGVGATGVGTISSAINMITTILCMRAPGMTMFRMPIFCWNIFVASVLVLMIFPLLTAAALGVLYDRKLGGHLFDPGNGGAIMWQHLFWFFGHPEVYVLALPFFGIVSEIVPVFARKPMFGYIGLVFATLSIGSLSMAVWAHHMFVTGAILLPFFSFMTFLISVPTGVKFFNWLGTMWKGHVSWETPMTWTMGFLVTFLFGGLTGIMLASPPLDFHISDTYFVVAHFHYTLFGTVVFASFAGVYFWFPKMTGRMLDERLGKIHFWITFVGFHGTFLVQHWLGNEGMPRRYADYLDSDGFTTLNQISTIFSFLLGMSVLPFIWNVIKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTSLPRIRSERPAFELHYPHMVERMRREAHVGHHVEPVTVKTK
complement(1858126..1858305)       Ribonucleotide reductase of class Ib (aerobic); Cp258_1685                           N/A                 MLWGGKGELTLYSSFGLITAGGEVGELVGVMYKYVPTLLCGAYHWNYLENAVFLAELIV
complement(1858422..1859408)       PHAGE_Mycoba_PegLeg_NC_021299: NrdG; Cp258_1686; phage(gi508177953)                  0.0                 MESYDSYLESHKKPVSAINWNSIPDEKDLEVWDRLTGNFWLPEKVPVSNDLKSWGTLNDLEKTTTMRVFTGLTMLDTIQGTVGAVSMIPDAITPHEEAVYTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKIVLSYYEGADPLKRKVASTLLESFLFYSGFYLPMYWSSHAKLTNTADIIRLIIRDEAVHGYYIGYKYQQAVREQTPERQEELKEYTFDLLYDLYDNEIQYTEDLYDDLGWTEDVKRFLRYNANKALNNLGYEGLFPADECKVSPAILSALSPNADENHDFFSGSGSSYVIGKAENTTDDDWDF
1859818..1860339                   Ferritin-like protein; Cp258_1687                                                    N/A                 MTHPILLLSIASMSINEKLAAALNNQITAELEASMVYLQLSYILDDLSLTGMRNWMQAQHKEELDHAAQFSKHLLDRDYRPQIGDIAPPKLDANSAVEAFEASLAHEQKVTAMIRELAEIADSVKDYDSRPLIDRFLEEQIEEEANVKEILDRLRIADTGSGILRIDAELAER
complement(1860412..1862571)       PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; Cp258_1688; phage(gi158079505)     0.0                 MSQSLGKHVAEPVSRTEQLDYHALNALLNLYNADGKIQFDKDREAANQFFLQHVNQNTVFFHDLEEKIEYLVENNYYEPGIIEKYEFAFIKDLFKQAYAHKFRFKSFLGAYKYYTSYTLKTFDGRRYLERFEDRVCMVALTLADGDQNLARNLVDEIMTGRFQPATPTFLNSGKAQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNLREAGAPIKKIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILNFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGKAFADISVSEHYAEMVEDPRIRKSKINAREFFQTIAEIQFESGYPYIMFEDTVNKANPIEGRVNMSNLCSEILQVNTPSLFNDDLTYEEVGEDISCNLGSLNIAMTMDSPDFAKTIETAIRGLTAVSEQTAINSVPSIRKGNDAAHAIGLGQMNLHGYLGREHIYYGSEEGLDFTNAYFAAVLYQCLVASNKLARERGRTFVGFETSKYATGEYFDGFDPADFAPKTEKVAKIFADSSIYTPTAADWADLKDSVAAHGLYNRYLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVYYPAPHMDNENLDYFADAYEIGFEKVIDTYAVATKYVDQGLSLTLFFKDSATTRDINRAQIYAWRKGIKTLYYIRLRQVALMGTEVEGCVSCML
complement(1862722..1863159)       PHAGE_Bacill_SP_10_NC_019487: ribonucleotide reductase stimulatory protein; Cp258_1689; phage(gi418489617)     1.22e-16            MLVVYFSSATENTKRFVQKLGFPAKRIPLHKSSPGLVVDEPYVLVCPTYGGGASISGGNTRPVPAQVIRFLNNEHNRSLLRAVIAGGNSNFGLDFGKAGDTIAAKCKVPYVYRFELLGTDEDVRLVRDGLLGNAAVLGLLPEPVA
complement(1863285..1863518)       PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; Cp258_1690; phage(gi589892251)     4.29e-25            MSITVYTKPACVQCNATKKALDRAGLDYTLVDISIDDEARDYVMALGYLQAPVVEVNGEHWSGFRPERISSLVAQVA
complement(1864001..1864123)       50S ribosomal protein L36; Cp258_1691                                                N/A                 MKVRKSLRSLKNKPGAQVVRRRGKVYVINKKDPRFKARQG
1864358..1865188                   PHAGE_Bacill_G_NC_023719: gp283; Cp258_1692; phage(gi593777739)                      7.94e-103           MDTLRDTIKNRLRTRSAIDPAEEITARVDFLAQYLSASGARGFALGISGGQDSTLAGRLAQLAVEKLRKEGYPAEFWAIRLPYGVQADEEDARTALAFIQPDHSVTINIKPATDACAADVAQALGLETLNDFNKGNVKARQRMIAQYALAGEKGLLVIGTDHAAENVTGFFTKFGDGAADILPLAGLSKRQGAQLLQALNAPDSTWLKVPTADLEEERPALPDEVALGVTYSDIDTYIEGSGEVSEKAATRIEHLWKIGEHKRHLPVEPGDTWWRR
