gi|00000000|ref|CP003540.3|  Corynebacterium pseudotuberculosis 258, complete genome. 2368876, gc%: 52.10%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
458602..459276                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; CP258_02250; phage(gi16129761)     9.05e-13            Corynebacteriumpseudotuberculosis258MLVLALDTATPDLIVGLVRVTSDTDTGVVVAQRILTDSRQHNELLTPTVVEILEESGQKFADIDRIVVGCGPGPFTGLRVGMVTAAAFGDALGIPVHGVCTHDAIANQLDGQALVATDARRKEIYWSLYSDGVRTMGPGIVAPTELSIPSRISTVSIPEKLGQLLPGPLRDVPQVNLRPLPECLVAVADFSQTPEPLEPLYLRRPDAKEPAPKPRSSAIPKVEI
459277..459768                     ribosomal protein S18-alanine N-acetyltransferase; CP258_02255                       N/A                 Corynebacteriumpseudotuberculosis258MFLRELTAADAPRCAELETLLFSEENPWSVEDLRAAINHSHTLYIAVVDSLEKGLILGYAGLAMLGPAHDPEFEIHTIGVDPQFQRQGVARLMMDNITFVADRAAGPVFLEVRTTNEPAIRLYESYGFERQGVRKNYYQPSGADAYVMMRTPSAVESNEESGK
459770..460825                     PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; CP258_02260; phage(gi16130960)     6.44e-75            Corynebacteriumpseudotuberculosis258MIVLGIESSCDETGVGIIELSPDGSMRILADAVASSMEEHARFGGVVPEIASRAHLEAMVPVMRQALDAAGVDKPDAVAATVGPGLAGALLVGASAAKAYAAAWDVPFYGVNHLGGHVAVANLEGEELPHSIALLVSGGHSQLLEVQAVGKPMKELGSTLDDAAGEAYDKVARLLGLGYPGGPVIDKLAARGNRKAIRFPRGLSRADDLRGEHRYNFSFSGLKTSVARYVEKAEREQSVISVEDVCASFQEAVCDVLTHKAILACQDTGAKVLLLGGGVAANSRLRELAAARCQTAGIELRVPRFKLCTDNGVMIAAVAAQLIHEGAPQSGLRIGTDTSLEVEIPLVYAAT
460987..461283                     PHAGE_Bacill_0305phi8_36_NC_009760: GroES; CP258_02265; phage(gi156564025)           3.57e-17            Corynebacteriumpseudotuberculosis258MANVNIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRFDGDDRVPMDIKEGDTVVFSKYGGTELKYNGEEYLLLNARDVLAIIEK
461295..462917                     PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; CP258_02270; phage(gi526178751)     3.62e-96            Corynebacteriumpseudotuberculosis258MAKLIAFNQEAREGILKGVDTLANAVKVTLGPRGRNVVLEKAFGSPTVTNDGVTIAREIDVEDRFENLGVQLVKSVAVKTNDIAGDGTTTATLLAQAVITEGLRNVAAGANPVELNRGILAAADKAVEKLGERAAEVASAADIANVATVSSRDAEIGDMVAAAMEKVGKDGVVTVEESQSIESYLDVTEGVSFDKGYLSPYFITDTDSQRAELDDPYILLVRNKISSLPDFLPLLEKTVEANKPVLIIAEDVEGEPLQTLVVNSIRKTLRAVAVKSPYFGERRKAFMDDLAVVTNATVVDPEVGINLNEAGVEVFGTARRVTVTKDETIIVDGAGTSEAVENRRQQIRREIENTDSSWDREKAEERLAKLSGGVAVIKVGAATETEVSERKLRVEDAINAARAAAQEGVIAGGGSALVQIAKELRVYAEEFEGDAKVGVNALANALSKPAYWIADNAGLDGAVVVSKIADLPNGEGFNAATLEYGNLIEQGIIDPVKVTHSAVVNATSVARMVLTTEASVVEKPVEAKPQAGGHHHHHHH
complement(463014..463295)         PHAGE_Mycoba_Bernal13_NC_024135: WhiB; CP258_02275; phage(gi640883727)               7.35e-10            Corynebacteriumpseudotuberculosis258MNNTDLLPAPQAQLWDWQLHGACRGTQSEIFYHPEGERGLARRSRERQAKEICSLCPVLRNCRQHALQYAEPYGIWGGLSESERATMLSRRHG
463595..464185                     PHAGE_Bacill_Blastoid_NC_022773: RNA polymerase sigma-70 factor; CP258_02280; phage(gi568192089)     5.04e-05            Corynebacteriumpseudotuberculosis258MRMMEEKGLAVAETETELSSLVPRAAGGDSRSLQRVISIIYPKVLSYARIRLSGGRHPTPEDVAQEICLAVATSISKFVDQGKPFMAFVYGIASNKVADAHRAYSRDVANPTEDVPETEVELETPESFALVAAGSNRVKELLDLLGDKPREIITLRVFVGLSAEETAEIVGSTPGAVRVAQHRALATLRKALEQEN
464188..465069                     hypothetical protein; CP258_02285                                                    N/A                 Corynebacteriumpseudotuberculosis258MTERRWARDGVEAAQSVEQLQADDQFLTHLSQGVDPTDGQDPLARLFLDARAEIQTNVPQAPTLAMLGLGSAEEFPTGELAPVTNESVDSSQLTDAPAAKVIELPRRRWNNAFAHALVGAAAATLIIAGGGTAIYNAGEGSALYALNQKFFGQTTNTEAVVALASKLDQANDLNAKGDKEGARQLLEQARELVNMLNARDRAQAEERIKEAERGSNVAPVPPPAEPEASSETVVTTMTTTVTETVTVEPTPARSTSTAPSTDRSATSSTSPVASTPSPTPAFELPQPEHSQAH
complement(465083..465493)         hypothetical protein; CP258_02290                                                    N/A                 Corynebacteriumpseudotuberculosis258MLRQINMVKHVNFDWQMPRDPFADDPNDPASFLDEDEPLPPLSEAEKRHIEEDLRLVQRFKKVLQPRGINGIFFLCEDCNEEHYYDWDIMMENIRATLNGELSPVHEPSLNPNPQAYVPWDYCLGYLDGLEAPRFF
465633..467153                     PHAGE_Bacill_G_NC_023719: gp120; CP258_02295; phage(gi593777579)                     8.74e-34            Corynebacteriumpseudotuberculosis258MTQQRVSTGGDNPDKVALVGLTFDDVLLLPDASDVIPSEVSTSTQLTRNISLNIPIISAAMDTVTESRMAIAMAREGGMGVLHRNLSIEEQAQHVETVKRSESGMVTDPVTCSPDMSIAEVDALCARFRISGLPVVDDNGTLLGICTNRDMRFEQDFSIKVSEIMTRMPLVVAEEGVTKQQALNLLSANKVEKLPIVDKQGKLVGLITVKDFVKTEQYPHASKDSTGRLLVGAGIGVGEESWTRAGALVDAGVDVLVVDSAHAHSSGVLDMVSRVKKEWGDRVDVIGGNLATRSAAKAMIEAGADAIKVGIGPGSICTTRVVAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDLAKALAAGASSVMLGSMLAGTAEAPGEIVVVGGKQYKRYRGMGSMGAMQGRGLSGEKRSYSKDRYFQADVKSEDKLVPEGIEGRVPFRGSIEAITHQLVGGLRASMGYTGSATINDLWNARFVQITSAGLRESHPHHIQQTVEAPNYH

#### region 2 ####
1851657..1851947                   PHAGE_Strept_phiELB20_NC_041849: hypothetical protein; CP258_08610; phage(gi100009)     1.16e-06            Corynebacteriumpseudotuberculosis258MQADLEAARKAEETARAEIAKRDLDEERSKLAAEFKLPAAMAGRIAGATPEEMREDAKALAEAIGPHTGPADKSAGRGSTNASPFDLNADIAAHYN
1851962..1852612                   PHAGE_Strept_SF1_NC_028807: hypothetical protein; CP258_08615; phage(gi971745050)     4.96e-12            Corynebacteriumpseudotuberculosis258MAPITLEQAKLNTMEDYDPAIIDEFRKSSTLLDLLTFDRAVSPAGGGATLDYGYRRVKTERGAAFRKLNSEYKTEAATTEKHSVTLAPLGGAFEIDRVIAKLGPAASGEIVFQMQQLIKSTTTKFLDSVINGDTGTEADGFDGLNKALLSTSTEVKSEADWTKFTSADAGMAVLNDLDEFLAVLDGPPTALLDNGHVLATFLRTRGGSPIEKSAKP
1852653..1853030                   PHAGE_Gordon_BetterKatz_NC_031247: membrane-associated initiation of head vertex; CP258_08620; phage(gi100034)     5.64e-10            Corynebacteriumpseudotuberculosis258MTSYTAKAFREEGWWGVQLIERPNILTQTRRLDQIPDMVRDALKLFPEIEPHPETVTINVVVVGDIESQVAKTLELRNRAAKAQEEATASMRSTAKALHDQGLTYRDVGQLLGVTHQTAKNLATA
1853188..1853377                   hypothetical protein; CP258_08625                                                    N/A                 Corynebacteriumpseudotuberculosis258LCYPKKINPRRIYIMDRAEKHYRAGHTNTPCGCKCFITRGTSYSPNLPQIRNFDPGQLG
1853687..1854322                   hypothetical protein; CP258_08630                                                    N/A                 Corynebacteriumpseudotuberculosis258MKKSKLFLCMALTTSLATASIPATAQESDPTVKEWLHEKCEGFSITVQSVHLKDKDQSRVPQWLRAKPNLGDTVKVQFKVTNNSYSDNAHSPHRKDDGNAYLVYDPLSVRNGVGVTIKPNPIYAWSNPDKNKNFILGRGDSVTVTYNHTITEQDLANRSIPDGPNYPISNSGTATPVCTISPGITYNWSPLSHFFPWLAGFLRSITSFFSR
complement(1854519..1856240)       PHAGE_Flavob_6H_NC_021867: cytochrome c oxidase subunit I; CP258_08635; phage(gi526120183)     9.52e-13            Corynebacteriumpseudotuberculosis258MTAVAPRLEDYSEPTRPAPTGGARKGTLAWKMLTTTDHKQLGIMYIIMSFVFFFLGGLMALLIRAELFSPGLQYLSNEQFNQLFTMHGTVMLLLFGTPIVWGFANYILPLQIGAPDVAFPRLNAFGFWVTMIGAAAMLSGFLTPGGAADFGWTMYLPLADSIHSPGIGSDMWIVGVGATGVGTISSAINMITTILCMRAPGMTMFRMPIFCWNIFVASVLVLMIFPLLTAAALGVLYDRKLGGHLFDPGNGGAIMWQHLFWFFGHPEVYVLALPFFGIVSEIVPVFARKPMFGYIGLVFATLSIGSLSMAVWAHHMFVTGAILLPFFSFMTFLISVPTGVKFFNWLGTMWKGHVSWETPMTWTMGFLVTFLFGGLTGIMLASPPLDFHISDTYFVVAHFHYTLFGTVVFASFAGVYFWFPKMTGRMLDERLGKIHFWITFVGFHGTFLVQHWLGNEGMPRRYADYLDSDGFTTLNQISTIFSFLLGMSVLPFIWNVIKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTSLPRIRSERPAFELHYPHMVERMRREAHVGHHVEPVTVKTK
complement(1856414..1856593)       hypothetical protein; CP258_08640                                                    N/A                 Corynebacteriumpseudotuberculosis258MLWGGKGELTLYSSFGLITAGGEVGELVGVMYKYVPTLLCGAYHWNYLENAVFLAELIV
complement(1856709..1857731)       PHAGE_Mycoba_Bongo_NC_041970: baseplate wedge subunit; CP258_08645; phage(gi100108)     0.0                 Corynebacteriumpseudotuberculosis258MGDESPSRKGETVESYDSYLESHKKPVSAINWNSIPDEKDLEVWDRLTGNFWLPEKVPVSNDLKSWGTLNDLEKTTTMRVFTGLTMLDTIQGTVGAVSMIPDAITPHEEAVYTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKIVLSYYEGADPLKRKVASTLLESFLFYSGFYLPMYWSSHAKLTNTADIIRLIIRDEAVHGYYIGYKYQQAVREQTPERQEELKEYTFDLLYDLYDNEIQYTEDLYDDLGWTEDVKRFLRYNANKALNNLGYEGLFPADECKVSPAILSALSPNADENHDFFSGSGSSYVIGKAENTTDDDWDF
1858141..1858626                   ferritin; CP258_08650                                                                N/A                 Corynebacteriumpseudotuberculosis258MSINEKLAAALNNQITAELEASMVYLQLSYILDDLSLTGMRNWMQAQHKEELDHAAQFSKHLLDRDYRPQIGDIAPPKLDANSAVEAFEASLAHEQKVTAMIRELAEIADSVKDYDSRPLIDRFLEEQIEEEANVKEILDRLRIADTGSGILRIDAELAER
complement(1858699..1860858)       PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; CP258_08655; phage(gi158079505)     0.0                 Corynebacteriumpseudotuberculosis258MSQSLGKHVAEPVSRTEQLDYHALNALLNLYNADGKIQFDKDREAANQFFLQHVNQNTVFFHDLEEKIEYLVENNYYEPGIIEKYEFAFIKDLFKQAYAHKFRFKSFLGAYKYYTSYTLKTFDGRRYLERFEDRVCMVALTLADGDQNLARNLVDEIMTGRFQPATPTFLNSGKAQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNLREAGAPIKKIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILNFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGKAFADISVSEHYAEMVEDPRIRKSKINAREFFQTIAEIQFESGYPYIMFEDTVNKANPIEGRVNMSNLCSEILQVNTPSLFNDDLTYEEVGEDISCNLGSLNIAMTMDSPDFAKTIETAIRGLTAVSEQTAINSVPSIRKGNDAAHAIGLGQMNLHGYLGREHIYYGSEEGLDFTNAYFAAVLYQCLVASNKLARERGRTFVGFETSKYATGEYFDGFDPADFAPKTEKVAKIFADSSIYTPTAADWADLKDSVAAHGLYNRYLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVYYPAPHMDNENLDYFADAYEIGFEKVIDTYAVATKYVDQGLSLTLFFKDSATTRDINRAQIYAWRKGIKTLYYIRLRQVALMGTEVEGCVSCML
complement(1861009..1861446)       PHAGE_Bacill_Mgbh1_NC_041879: ribonucleotide reductase A subunit; CP258_08660; phage(gi100062)     2.66e-18            Corynebacteriumpseudotuberculosis258MLVVYFSSATENTKRFVQKLGFPAKRIPLHKSSPGLVVDEPYVLVCPTYGGGASISGGNTRPVPAQVIRFLNNEHNRSLLRAVIAGGNSNFGLDFGKAGDTIAAKCKVPYVYRFELLGTDEDVRLVRDGLLGNAAVLGLLPEPVA
complement(1861572..1861805)       PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; CP258_08665; phage(gi589892251)     4.98e-25            Corynebacteriumpseudotuberculosis258MSITVYTKPACVQCNATKKALDRAGLDYTLVDISIDDEARDYVMALGYLQAPVVEVNGEHWSGFRPERISSLVAQVA
complement(1862289..1862411)       50S ribosomal protein L36; CP258_08670                                               N/A                 Corynebacteriumpseudotuberculosis258MKVRKSLRSLKNKPGAQVVRRRGKVYVINKKDPRFKARQG
1862646..1863476                   PHAGE_Bacill_G_NC_023719: gp283; CP258_08675; phage(gi593777739)                     9.22e-103           Corynebacteriumpseudotuberculosis258MDTLRDTIKNRLRTRSAIDPAEEITARVDFLAQYLSASGARGFALGISGGQDSTLAGRLAQLAVEKLRKEGYPAEFWAIRLPYGVQADEEDARTALAFIQPDHSVTINIKPATDACAADVAQALGLETLNDFNKGNVKARQRMIAQYALAGEKGLLVIGTDHAAENVTGFFTKFGDGAADILPLAGLSKRQGAQLLQALNAPDSTWLKVPTADLEEERPALPDEVALGVTYSDIDTYIEGSGEVSEKAATRIEHLWKIGEHKRHLPVEPGDTWWRR

#### region 3 ####
2359685..2360632                   PHAGE_Bacill_G_NC_023719: gp344; CP258_10825; phage(gi593777800)                     9.08e-66            Corynebacteriumpseudotuberculosis258MSEAPNATTVHDVAIIGSGPAGYTAALYAARAELKPIVFEGIEFGGSLMTTTEVENFPGFPEGIMGPDLMDNMRSQAERFGADLRMELVTKVELEGEIKKIWVDDQEFHARSVILATGSAPRYIGAEGEQTLLGRGVSACATCDGFFFRDHDIAVIGGGDSAMEEATFLTKFAKSVTIVHRREEFRASAIMLERAKNNDKIKFLTNKTVSKVLGENTVSGLELTDTATGETSILDVTAMFVAIGHDPRSDLFRGVVDTNDAGYVRVEEPSTRTNVPGVFAVGDLVDAHYQQAITAAGSGCRGAIDAENYLAALDA
2360694..2361017                   PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; CP258_10830; phage(gi100156)     1.74e-16            Corynebacteriumpseudotuberculosis258MNAPIALTEATFKTTVIDSDKPVLVDFWAEWCGPCKKLGPIIDEIAAEMGDEVVVGKVDVDAERNLGAMFQIMSIPTVLIFKDGQKVAEFVGVRPKSEIVAKLRSHQ
2361106..2362287                   PHAGE_Bacill_AR9_NC_031039: hypothetical protein; CP258_10835; phage(gi100271)       8.91e-09            Corynebacteriumpseudotuberculosis258MSDILRVGDHSPRVAEVRTALTRLGLVPDSDKEIKQSKGQTFTDPETYFDEDLAEVIKGMQQARGIIASGEINEVTLRALREASYKLGARVLSFEPNNIFVGDDVVQLQTQLQELGFYTDRVDGRFGENTYKALLSYQVNYGLKSDGVCGPETIRAFGRLGRRITGGSPQALRERERVRDAGPMLAGKRVVIDPSLGGNSRGQVVQGPYGEITEEEILWDLATRVEGRMIAAGMETIISRPRQDNPSHLERADIANAFDADVMICLQCDQYQNDKANGVATFYFGSEAGTSSLTGEMLSGFIQREISARTDLVNCGNHGRTWDLLRITAMPTIEVVLGYLTNPHDVTILTDPKHRDAIAEAIVVAVKRLYLLDDDDQPTGTYKFAEMLEQGML
complement(2362339..2362938)       hypothetical protein; CP258_10840                                                    N/A                 Corynebacteriumpseudotuberculosis258MFWELEESAALRASAAGTPTLEKEAWLAAMLSAYGTCGFNITSADNFASGNPRAYATLLYCPASEAPGCARLPTAPLTSDAYVLTSLHCDPNMVGSGLETMLLDAAIVHLARQGIKALEAFARDESFCDDPFHPQPENIQRIVNSAEEIGLMTVELLESAGFEIIRHHPVLPLLRLHLPPEHALLTVEAIEPLLANVTA
complement(2363048..2364100)       PHAGE_Agroba_7_7_1_NC_019519: hypothetical protein; CP258_10845; phage(gi435844368)     3.84e-13            Corynebacteriumpseudotuberculosis258MAQETRKGGLGRGIGALITGSPAPGQRIGASAADVVFGGAAEKKRQSHSPRDAKGARISPIIAQAVEKQSAGSRGADQQLEEFGATYREIPIGLIIPNEKNPRSVFDEEDLAELVHSIREFGLLQPIVVREAADDRYEIIMGERRWRASSKAGLKTIPAIVRKTDDSEMLRDALLENIHRVQLNPLEEAAAYQQLLQEFGVTQNELADKLGRSRPVITNMIRLLALPVAVQRKVAAGVLSAGHARALLGVKGGEAPQVALADRIVAEGLSVRATEEAVTLMNRGEKPAPKKREKAPTPEFLTNAANRLADGLDTKVSVSMGKRKGKIVVEFGGREDFDRIMGLLGGNSEG
complement(2364106..2365098)       PHAGE_Natria_PhiCh1_NC_004084: putative plasmid partitioning protein Soj; CP258_10850; phage(gi22091150)     4.58e-27            Corynebacteriumpseudotuberculosis258MDDQNWEDTPIAAAARRAAQVLTPNSLHLPRPDSSRRLTVANQKGGVGKTTSSVNLAAGLAINGLKVLVIDLDPQGNASTALGVDHRAGTLSSYELLIGECAVEDALQETTASENLFCIPATIDLAGAEIELVNLVRREYRLSDALNTEYMQQAGFDYIFIDCPPSLGLLTINAMTAVDEVLIPIQCEYYALEGVGQLLNNITMIRQYLNPNLHISSILLTMYDGRTKLAEQVMDEVRGHFGDVVLGTKIPRSVKVSEAPGYGQTVLAYDPGSRGALAYLDAARELATRGDYVPSESSGPIGMSPEALREQQEQNQSDGEADHADETSKE
complement(2365203..2365874)       16S rRNA (guanine(527)-N(7))-methyltransferase RsmG; CP258_10855                     N/A                 Corynebacteriumpseudotuberculosis258MKHEENNGTEHGLELTPPPEIAAEIFGSLLDKAVEYHRLLATDGSTRGFIGPREIPKLWDRHILNCAVIGEAMDSNARVADIGSGAGLPGIPLALARPDLEITLIEPLLKRSVFLGEVKDSLGLDNVTIMRGRAEEKVIRNELGLVDVVTSRAVAPLGKLAGWSLPLVRLGGKMIAMKGSSVKEELARDEKMIFKAGGGKIKIFTVGDQLEDPTTLISIRKVR
complement(2366059..2367015)       membrane protein insertase YidC; CP258_10860                                         N/A                 Corynebacteriumpseudotuberculosis258MLNFIYWPISAILWFWHKVVSFVFDPGSGISWVLAIMLLTFTIRAFLVKPMLNQMHSARKMQELQPLMQEIRKKYGKDQQKMMAETRKVQKEVGVNPIAGCLPALVQMPVFIGLFHVLRSFNRTGTGHSQLGLSVEVNRETPNYIFSAEDVQSFLDARIFGVPLSSYISMPADMYKAFQPVDFTRVNIIAVAAPLILIIVVATHMNGRLSVNRQKARRESGLQAAPTSGQMQMQMDLMNKMMLWFMPLTILFTGVLWHLGLLFYMVANNIWTFFQQRWIFNKIDAEEAEEIEAKKAAKRATAPKPGQRPQNPKKGKKK
complement(2367071..2367358)       PHAGE_Haemop_HP1_NC_001697: hypothetical protein; CP258_10865; phage(gi9628603)      1.12e-07            Corynebacteriumpseudotuberculosis258MCYSHDQMSNENNNSRLVRPAGIISGLLYDAVRFYQKYISPLKMGSTCRFDPTCSAYALEAVSRRGAVIGTALTIARLAKCGPWHPGGYDPVPRR
