gi|00000000|ref|CP003558.1|  Synechococcus sp. PCC 6312, complete genome. 3697276, gc%: 48.52%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1104970..1105012                   attL                                                                                 N/A                 TAATTCTGGATCAAATCTGTCAGAGAGAATGATCCAAAAATCA
1110529..1112793                   PHAGE_Rhodov_RS1_NC_020866: integrase; Syn6312_1135; phage(gi472342882)              1.15e-45            SynechococcusspPCC6312MWFSAQELTGLPGLPGTVQSINQKAKREGWQFRNRSGKGGGKEYHVSSLPTEAQARLLELENTPIYKEKTDELCGSALPGFDSVLCGADGDFVDSHCDFTSRLLTEAPKDKKTRQAEARQQILLTLQDYLTRQNAVGLGRVRYCRQAFVDAYNDPLAPKGELRLPWWVYGEVKSISYQTLYSWELKRDVAGVSGLARKQGKRTTTIEATPELKQACLDLLLAHPDISVVGMWHEMCERFEDCPSLPTLRRFVRGWKAENSDIFDFADSRKGWRNRHMKAFGSYRATRFNQRWEIDSTLADIVWELDDGFGGFQRYALVVAVEVYSRMARVLVCRTSNSLAIAAILRECLIDWGVPESVKTDNGKDYLSRHILNILSVLGIEHKKCVPFNPQQKPYVERFNHTLNHGAAMVLHPRYLGHDVVTRQKIRSRELWPEKAKRKGDESEIEVVRINKSLRQMQCFIEEWLIDYHNTPHEGLGQIRDGAGNLRHLTPYEAAANQPAKRIENVRALDVLMMPAPQGGYRATAGKKGIRVGNLPDGTPAYYWHECLVEVGRRFERVFVKLDPNPALIHLFDSEDCTEYLGVCECYEISGNDPMPGIIATRRAEKESRKLVAAARLSRRRLEKTELTPGREVALLKGQGEIHETPALKAAANLQPARNTTVIGIGPIKESAPLPLPNPGAPRLEREVVIPRVLNQWYAGEPVDPVELAFVGRQFELNRGGVTLVECLVRDREDFFKFRRWVLAQLSEGIQQTG
1112819..1113103                   hypothetical protein; Syn6312_1136                                                   N/A                 SynechococcusspPCC6312MNTVVIQIGNSDDRLSQRDWVRFRARVREVVCRYCAQIHFDGHSNSDAVWQNACFVAEIPEGLSEVALKDVLSEISDEFGQDSIAFTTGTTEFV
1113155..1113877                   PHAGE_Rhodov_RS1_NC_020866: transposase; Syn6312_1137; phage(gi472342883)            6.06e-26            SynechococcusspPCC6312MQNIAITKNLKRFQGAFGDLIGRSERIPGLGLVTGPAGTGKTVAATHICHKQNAIYVLADPFWTASSMLGAILHKLSVNPGRVSNAEAFRLAVERMRDTGRSLLVDDADFLFDSSDRNRLVEGLRSLHDKSQQPVIMIGMEKIRSKLHRYPQVLGRMSRSVDFEYLDLEDTRAVLEVICKVSIAPDLSQVIHQRTKGALRLIVVAAETIEAEATAQGWEVVTADQWGDAVLFTGDSRRAA
1113874..1114413                   PHAGE_Rhizob_RR1_B_NC_021557: hypothetical protein; Syn6312_1138; phage(gi514231144)     1.42e-05            SynechococcusspPCC6312MRFCLPRQIVWTAIAPRVGEVVDFAPLFESVGTTVVLQRSWLLALSRAGYLLRQGRGGRFQVLRHTGVLAPMRRKDGSLYDPNTAGPIELGALRVWVALLINKVLTQPEAAALCDLSVQRVAELLSAWQRVGAVRVSRVGTGNGLEYRIVRDQPICPIVTPHGVFDVYLNKFLEVANDG
1114406..1114783                   hypothetical protein; Syn6312_1139                                                   N/A                 SynechococcusspPCC6312MGNRLAFRPKAGHFIDCERLGNGTFRVEIQQGVKVCYGVLTPEDARMTARMMAGMGPVRLVFRPQTGHLIDFERLENGTVRMEIRQELEVCYAVLTPEDARMLGRMLMAGSGPVLPGFTQMRRAG
1114783..1115103                   hypothetical protein; Syn6312_1140                                                   N/A                 SynechococcusspPCC6312MRAPHPEGTIERELTCELFRREVLGCCNLRELRYRLLWTHKMLLSAYDEIEIFEAELSEALDGRERDFRRFIGQLDELCLELDRLEAVVDPQGGAVEALLLGGDCV
1115096..1115662                   hypothetical protein; Syn6312_1141                                                   N/A                 SynechococcusspPCC6312MSELERLKNYLFEHCYGQARGQKMADIALALGRCSRELRYLVQELRLRGCPICAHPNTGYYWAETPEELEVALGFLRGRALCSLRQVARLQRHALPLLAGQLVIGELPPVPEGAPGAEYGGLVALEVALPYTLHERVEAYLENRFWLSQDDLIRQAVAQFLALQGVVLPPNLLAELAEEIIEGELIHE
1115655..1116455                   hypothetical protein; Syn6312_1142                                                   N/A                 SynechococcusspPCC6312MSNLKPQKETFEQLSLIERSDLERLEQTIRAGLNTFVEVGQALQKIREQRLYRETHQTFEAYCEDKFDLRRNYADKTIAASSFVERISTIGVILPTNESQVREILTLPEDRQVEAWREVAEAAASEGKLTADLVKTVVKRLREVRLPGGNDPQSPDVASGPRVAGPEVPLSLLEAGQLVLTGVGEEMLHFRDLSEAQDLAGRPLYPQWIGFGPSCLLRELLPLFRDGLFCLYFGWLAVYVGDSPIEFYEAFVGLGDIWARQEVGDE
1116452..1116688                   hypothetical protein; Syn6312_1143                                                   N/A                 SynechococcusspPCC6312MTPWRLGLIIPDKVRGGDWGWLVQREEEANSVGKSEQNPEAQASKELPKRLNEMSEAERAEAAAAIEKARANLRRGHE
1116681..1116929                   hypothetical protein; Syn6312_1144                                                   N/A                 SynechococcusspPCC6312MSRTTPVTILDFLSRQTRSIGFRSLAKGCNSRLGVEKFHHLLWLLIIHGLVRYSSTDPRKTTLYQITEEGRKLLQEFREKGI
1116959..1117156                   hypothetical protein; Syn6312_1145                                                   N/A                 SynechococcusspPCC6312MLIEQYLDRLAAERVEWEVLCQQAYSPEEKQVVVEKIRDLLAVMRSQREWLQAGLKSVKEKEQGL
1117153..1117338                   Phycobilisome degradation protein nblA; Syn6312_1146                                 N/A                 SynechococcusspPCC6312MNLPHLDPDLIQLSLEQQVLIETIKWQIPQMSRGQLEERLLQMTQLAEARQAVIRAMVKGG
1117340..1117597                   hypothetical protein; Syn6312_1147                                                   N/A                 SynechococcusspPCC6312MKREQELLRDYDLELTNARRKIRELEAFVSEVKAMRVLQKRYFVGRSRTVLQESKNQERCVDRLVDSLLEDSTVAQGDLFGGSNG
1117952..1118419                   PHAGE_Burkho_BcepMu_NC_005882: gp02; Syn6312_1148; phage(gi48696912)                 4.38e-19            SynechococcusspPCC6312MAESVRRSLLAKIHVAKKQLGLSEDQYRAIVAGEGGAESCSELTLDELGLVLSEMERLGFKAKQSESLSPRSRDKTVKTQTDRLVALWINLYQAGAVKNRSHQALQEFVIKFLGANVKVMPGVDPLQALSWRQKQKTIGALEKWLRKVREEAKQA
1118416..1119084                   hypothetical protein; Syn6312_1149                                                   N/A                 SynechococcusspPCC6312MSEQERIAKGLAMIRHELRRLGLRESSPLVLILCNQYKAANLQGLDIDGLLAVYGVLKRSNAEPDFSGQRDLSPELDSVLFRLKELDLSPREFVITAWCQAHGYQGFDDLDAEGLNLLAAVLERSRLRRLTGSSLQEFVRLEWWLRLTIAALNGLAGVGEFEAALQILNAKIAANDAVDERIEQRMILELTKNCSPEDLAREVSEVRRLARVWQPWRREEAR
1119081..1119401                   PHAGE_Rhizob_RR1_B_NC_021557: hypothetical protein; Syn6312_1150; phage(gi514231154)     3.20e-06            SynechococcusspPCC6312MIIEDLRRVLEDKADAFFAAFGGQELYIPKCPTADHSISLEIGVEAATRLGAYFGGTTIYVPWSETRASRNREIAADLAAGTCSLQELSRRYGLSRRHLRRLKGSS
1119470..1119835                   hypothetical protein; Syn6312_1151                                                   N/A                 SynechococcusspPCC6312MKEFLLPLVFGIGLGAGVLLGGYGIFRVGLRLEPEEALRRAVALGVKFWQIYSFRAAAPIGSKAATGSQLYEAGLVLKSLIVSELQDPGIAPELKKAHPELLAVDPMALAERVAQRVQGAV
1119835..1120842                   PHAGE_Entero_SfV_NC_003444: lysin; Syn6312_1152; phage(gi19549037)                   2.26e-28            SynechococcusspPCC6312MNVIEAILKPTDRWQDTIRGRLRVFALDLVNNGKRVDQVPVFSGAPRAQELVDPRQDYSGSLRPIPEGIYKIGQPEEHPQGDWGPGIGRLWIPLEVLPEYRVNNRGDFGIHLDSNFATSPGSAGCPVAQKMPTLQTILGWLFAKARPKWLVVDHGQGLLKARGYQYLNFARNPAGVAGKPWLRYPINNTRRAWLDLIAWAEGTGKHPGEEQYRVMFTHKLFSGYADHPRQIQGSGRLRSDAAGRYQFLSTTWDEAKRALGLPSFSPECQDQAALWLIDKKRGALNLIDSGIQIESALNRLSWEWASLPPGRYGQPVRTYAECVQFIRSWQFGVLD
1121135..1121494                   hypothetical protein; Syn6312_1154                                                   N/A                 SynechococcusspPCC6312MKSTILVAAVVPPSQAVVPPAQLMGFEVAVVGIAVSLVSALAAGAVSWAFARSVRSVDHRIDKLDLSVSSLDLKHRELELHIANHYLKIDDFIRNTNAVDAKLEGLHRKIDLLMERKNG
1121487..1121801                   PHAGE_Pseudo_B3_NC_006548: hypothetical protein; Syn6312_1155; phage(gi56692597)     6.70e-06            SynechococcusspPCC6312MANSYQALQNAHTEDVRWRLLSILNIVPSRPRAESTLSFDLIAAGLPVTDTELRSELDYLEELGLVRYEADQLDRRQYSIRAYGRDVAEYRVACPPGIRRPAVL
1121811..1122332                   hypothetical protein; Syn6312_1156                                                   N/A                 SynechococcusspPCC6312MQRSWFDQLPETHRSAIRNLFPDLRHRPVEDWHQAVCDYFLANSLSPFPSQTAVWRQFRSFERLERQREAYQIAGEVCAAGETEGLLEASERILLAELLFAAEEFRSEDLSPKDRTRALRDLAAAKNGLSNSRKTDLELKHKVEAKLTDLEKTRQKLDPETLRVVMEELIGIL
1122319..1123665                   PHAGE_Pseudo_B3_NC_006548: large terminase subunit; Syn6312_1157; phage(gi56692599)     4.04e-60            SynechococcusspPCC6312MESSSLIELYPYQKRWLTDASRFKIGMFSRQTGKTFTTCLEIVLDCLKTEAEGGRARWVILSRGERQAKEAMDEGVKRFLKLLNVLFEAHDYDWEGSFKALEVELPGGSKITALPANPDTARGFSANCFLDEFAFHKDSRAIWQALFPVISKPGLKLRITSTPNGKGNKFYELVTAAEERRDETPWSLHRVDIYQAVADGLPRDIEQLRKALNDPDSWSQEFELEWLDEASAWLTYELINAVEHSDAGKPDLYTHQPVYLGLDLAVRRDLWVATVLEPVGDVLWSREIVAKRRPSYAEREAIVVGLFERYRVGRLCIDQTGLGEDITVRYQKLFGEFRVEGILFTTPNKLVLANGIKEAFEDRKIRIPIDPQLREDLHKIKKIVTPTGAMRFDADSDSQGHADRFWSLALAIQAASSPAAPIEFHALEPDAPDLTGWADELSLIGGGW
1123665..1126367                   PHAGE_Pseudo_B3_NC_006548: portal protein; Syn6312_1158; phage(gi56692600)           8.23e-88            SynechococcusspPCC6312MFPHVQVKAPSFSEIATVDGERDITRSWLGELLDSQDPIVRLRGHGRLEIYDKVLEDWQVHSTFQQRRRAVTRYRWEVSPGSRPNQEPGRAEKMAADFIRAVLDSINWDDITDKKLYGVFYGHSVAECMFARDGKQIILDDTKDGIRVRDRKRFVWDKNFGLRLLTREKSLYGEPLPPCKFWVFNTGGDHSDDPNGRGLGSWLYWPVLFKREQVRLELRYLDKFAGGSLIGKYPPGATLAQVKTLKEAMQQLRSGGGAAIPEGMMVEVLQASAAASSYSDFQDRMDESIAKVVLGQVGTSEGVAGQHRGEMQHDVRQDLVISDSDLVCGSFNRQVVKWLTHWNFPGAVPPQVYRKIENDPDPNTQADRDTKIIGLGFAPTLDYVKDQYGEGFIGAGEKGDGAGVPATLLPSLVQVITAVAGGQITATAGRQILVNTIPGITPEMAEAMVEEPPQEQSLDSQLQGALGGDGAAPKDTQQPQDPQQGDAAFSALIDQIQGLVEQPEFAQKKCSKGYPCKNACISTTKKCKSPLPGQASDFAGWVLTQTLTGGTLSAAQNQAAQGITVAQGLGLASTPTTPPPPSAWQNLPSTLTLPAPPAPAPTPPPKKPRAKKVKAATNAPTPPSIPVTGTDRLAEAIKNNDFATVVAESEAIYRDAKAWAKTYVDVARGDVGIDFRAGTTPGNFNKPDPILSVLMQTRTGFGDLPEVISRQEMERELATGKDVLYRGFSSERASFDARFTQLKTGEALGMHGIYGHGLYTAIAKGDDSLDRQNAHSTAVGYDGHGVVKMMPKDGFATVKDSLLKTETKRTQLAFGKWATKERNKLSDQAQADFDQKVKWAERVMWGDEGSAGISGRFAVLKGYDMVDISGVSYDSSYRLLLNRAKVKIQDERVSPRGKTI
1127295..1128437                   PHAGE_Pseudo_B3_NC_006548: hypothetical protein; Syn6312_1161; phage(gi56692601)     7.92e-46            SynechococcusspPCC6312MPEVNYARLPFADAIEFFRGKVNADTDRWDDIWQEQHDTQFVVAGAKGAILQDFREAVEKAIAEGMSRADFLQQFDQIVATRGWDYKGGRDWRANLIYGTNLRTAYAAGRHQQQTEPSQLKRRPYWGWQHGDTRNPRPLHLALDGKVFRADDPFWQTMYPPADWGCQCQVVSLSERDLRRLGKDEPDIPPIVGGIMSAFDPKTGTMLAARVEAGAGWDYVPGQSNIQQRRQQVLKRLDPALQGQIMAEVQGPSNLSGTNQGQIRAGNTMAGRTPPPGIVRNSRFVSRHLPQGRDAQKLLQQGKAAHVFLDEATMSRVESDLLARGEFAGTVRGHDRYGLGYPEPIGYRIAPDGERQSLYYAELKVKDGEYHAVPRNKPAT
1128406..1128672                   hypothetical protein; Syn6312_1162                                                   N/A                 SynechococcusspPCC6312MPSLETSLPPDWVFIETWVDATSRIPYVLMVVADQKGNYKIYDPKENYKSILESNRYEDVEEFLLEDEYDLVGKRFSDQVLTPPQLAA
1128672..1129118                   PHAGE_Pseudo_B3_NC_006548: hypothetical protein; Syn6312_1163; phage(gi56692603)     1.27e-07            SynechococcusspPCC6312MTTIRVTFEDSGVQNALNQQANRLGNPREMLADIGAHMDMKTRTRIRQLGQPQDAVTTLDGQAWAPLAEATIKHKQRKRKKERKLQQDGELLGTITYQANSQQVEIGSGAKHSVYQQFGTKNIPARPFLFVTAEDEAEIGEIVRDFLS
1129183..1129536                   PHAGE_Erwini_vB_EamP_S6_NC_019514: gp049; Syn6312_1164; phage(gi422935888)           2.41e-08            SynechococcusspPCC6312MTLLEGVTPEGTTKAIRVNSEGRSLNPVVSLISTGPTQTASLGTDWTALAAGACSQITLQNVTGATISYRLGEAATEFDLPTNSSVLLPCLANSSEWQIRRKDTSNTRVTVQFLRVG
1130364..1130765                   PHAGE_Microc_Ma_LMM01_NC_008562: hypothetical protein; Syn6312_1166; phage(gi117530213)     3.77e-08            SynechococcusspPCC6312MIFYDPENPERGAVAVPQGDFQTPIAEEDFETLVAGLEPETAPPNWDGFNGAILSDVRLNQVQGAALSVAPAAAIALPAALSQVSTNGVTAFGLVFGAVCGAGGATTEDRQAWADLAESCNLPAEFVAVVRGE
complement(1130819..1131232)       transcription termination factor; Syn6312_1167                                       N/A                 SynechococcusspPCC6312MDIQQLDNEILAAKEALKKLRQYKRLLLKIAAEKAEIATLETAPLGDTPPEAPITAVNDLDTTTPAQTDTTAPVPDSTPNPDNLVLFPHDDLSNLTIRQLKALASSHKIPRYGRLTKDQLIAALAVTFPLGGWGLAA
complement(1131306..1131875)       PHAGE_Bacill_PM1_NC_020883: hypothetical protein; Syn6312_1168; phage(gi472438312)     9.90e-05            SynechococcusspPCC6312MFDLLYAGIDVAFGIVDIACSTARFAIAAAVVIHEAGQATIQAGRDARVVFDNWVDTLEANAHGCTAITVARSAIDTVAITVFPNSYALAPVAIAGYLPAYEEEAVAVDCEVVRPTPRTDALKALLAAEHHNFCELVATTAQLVATQEANLNAQYAAMNIRELKAAAKAAKVKGYSRMTKDQLVAALTA
1132164..1133108                   PHAGE_Pseudo_B3_NC_006548: protease; Syn6312_1169; phage(gi56692604)                 1.86e-16            SynechococcusspPCC6312MLWAFSVDVLYAKPRSLDICPVVETGTGRDFRGMKPIKLPFLVKGTHPATNGRSYTFGDSEIEGIREYDPTLRRAPIVISHDLKGLDEAEILKNKKLSDELAFGLIEGVVLENGVLKAKSNRYVPKILDWFKEGRIAQISAKFFSPTDPQNPKPGKYYLRHVALLGVSPQAMENLPGPEFAQFNPEGEASVEIEFAVKGAGAGKKKKCQKGWSCGAGCISRTKRCPSALGSEAKSYAGYLRRQLSRIGVKNKDERQESRTEAAAFEDLIAGPGKKNSKANQKSRTAAIKQANSSEVKRAAAEYRRAERRLGRNQ
1133108..1133863                   PHAGE_Pseudo_B3_NC_006548: scaffolding protein; Syn6312_1170; phage(gi56692605)      1.73e-07            SynechococcusspPCC6312MVNLPENPTPEQLNKIIPILVKEILRSGERNYRDAIENITWQRKGEGIEGTFETGKDVFGYSLMPKGEEWYRDMWVISGVDDEGAEFAAADGDEDLDFEITGEGMDANDRAVIESMALQEREQALAEKELAFALRQESLAVIQPLVGKKIPPAWEDDLVQFRAAIGAAAGPGDLEFSQGSYSPVAFFDRFLESLPEQIEFSEIAGGDGAVVGADDAQAIANAAIEFQQEQRSKGIEISTVTAVAHVIGKDK
1133866..1134624                   PHAGE_Pseudo_B3_NC_006548: hypothetical protein; Syn6312_1171; phage(gi56692606)     1.13e-16            SynechococcusspPCC6312MKTPGLIKNFDSASPVAPRRIMAMGASDGYAEQASSPSQRLIGVSQWGRSQAGRTDVVLSWIEEVDYGGTITRGQLLTTDADGKAVTAGDGDYSVGMAFVSGVAGDIGYVLINPSRVDVGSNLTASPAEINVLDNAPANCVFTIGSESSNIINVSVQLRNADNTNLATRRAVQCYLSGANTGATLATAPSGGVAIGTNGLLIEPVADRFFTAVTNASGVFDINITDTGTPTVYLVVVFPNGSIQVSNAITFA
1134634..1135557                   PHAGE_Pseudo_B3_NC_006548: capsid protein; Syn6312_1172; phage(gi56692607)           2.89e-100           SynechococcusspPCC6312MADYPFVEQPQYTAIALAYTNQAMIADIISPRIPVTEESFKWQKHKLEDGMTIVDTRVGRTSRPNQVEFATTEETSSCEDYGLDDPIPQKDIENAPKGYDPQSYSTEMLTELIQIDREKRVADLVFNLNTYPSAQRQTLAGSSQFSHPDSKPIDVMLNALDEMVMRANTAVFGQNTWTKFRRNPAVVSAINGKNSSESVTRQQVAEFLEVDRVIVGASWLNSAKRGQSASMTRLWGKHIALLYLKPLAAYTRGITFTFTAQHGQRVAGTIQDPHIGLKGGVIQRVGESVKEVIAAPDCGYFFQDAVA
1135559..1135849                   hypothetical protein; Syn6312_1173                                                   N/A                 SynechococcusspPCC6312MANSKVLSQLHHNGTLYAPGVEVELPREIQARLAELGVIEILPEANQTLGTDSASEEKETPEQPEVEMAVEAPPKKQPTPRKRPAPKPTAQGESGE
1135842..1136120                   PHAGE_Bacill_0305phi8_36_NC_009760: DNA-binding HU protein; Syn6312_1174; phage(gi156564019)     6.25e-24            SynechococcusspPCC6312MNKSKLIEVAAEAAEFTKKDMEIALNAVLDAIQNAVAAGSEVKLVGFGTFKPIFAQAREGRNPQTGESIKISATHKPVFRAGQGFKDKVARR
1136117..1136557                   PHAGE_Ralsto_RS138_NC_029107: hypothetical protein; Syn6312_1175; phage(gi985760947)     2.02e-14            SynechococcusspPCC6312MNYCTAEDLIARFGEPELIRLTNTGLPGATEINSERLESAIERQSRVMDAFIAVKNQLPLPEVPPVLVSFCCDLVRSDLDNKREREEVKQRREEAMTFLKQLAKGEATLGIAADAEEKPATAEPILVYGTAESLDEEPLDQALRWF
1136558..1137007                   hypothetical protein; Syn6312_1176                                                   N/A                 SynechococcusspPCC6312MGLRTAIEQDIVAALAPLQELGVFVVDCPEESRKSGEVFDVGQVSVGFTGETAEAPLSLPVHGTPLIQPFSMSFEVHLELQDDNHRKAANLIDQVEELVNGLIPTGQDKPLYFIRSGFLQLDSESIWHYAVIFGFQVVKKSHLKEAVNA
1137000..1137770                   hypothetical protein; Syn6312_1177                                                   N/A                 SynechococcusspPCC6312MLSGVGRLALITRSLSATAIAQELMIPGKFSQFNLNVETENKKAEAWIDGVKENVSSAIGKRTTTLQLAFQYLDWFHLQLAQDELATNVNVTLPIYKTVTVPATPFKITDADISSAGIASSVKAYVTDRGSWGEAGYLVAESGTLAAREFEADHTDTSITFHSGLAGASVTYVVDKAFTSIPSIGKAPDAIKIGEVSFIGKGYGPEFPNGVFIHIPSLTRSGSPSLQTDDVPTFEIPFDCNVASGYRTPVQYYRLP
1137794..1138378                   hypothetical protein; Syn6312_1178                                                   N/A                 SynechococcusspPCC6312MFATFPRLEFEDRCGVIRGLAGCSLIGRQEFFERLQQVQQRLQELPELSTVAELYDTDTRFRHYCDRCLILNGLDPDWLTMSMLEEMLFVRVVEGETRPGLLTELNQPPKSSKPTDEPATLHEILASLATHEKSLGDALKLASDLNLPANDLLEILTARSELEKSADPEYRKKKQQKAWQEKALADLTGGMPNG
1138371..1141691                   PHAGE_Plankt_PaV_LD_NC_016564: tail tape measure protein; Syn6312_1179; phage(gi371496213)     4.40e-50            SynechococcusspPCC6312MADLKTRLIFSAEGTGRTVGEIRQLQNELKRTGQEGAQSIQQLDTVNTRLVGSVQELAAKYYLVISALQGIVAAARPAYDLLIGQNERLQQQILGTAASVSATNRVFQDGFQIADPTEAITAVTPLIEQSLAKIRKGSLELVGVTSGQLVDSYQIIAGQTGELDINLDQAADLTLDFAAALGTLGIPLFQARQEITSIAQGTIDQNSILAKTLGLTNDQVKTLKEQGRLYDVLREKLAAFRAGNALAANSIDGITSNIQELVELLGLELGAPLREQILGPLADIFEFLNSKSEQITEFLREVINLFDDIGASIRDSLGNSFSQLEAALAPIQERLVALWADGTIQNGLRDLGAAIGQIIELFFEWQALLTQLIGPQIQTLLTLLPFVLKGAAALLSGISLTLQAIVRGIAILVDAVLSFPRLIADIGRSITSTFGLGKESVDRFFRALVNGISDPRIRLLLKLLGVSIAELGDNFDPIVEKARDATDAIVRETERLQSELASGAAGASGKIGEQIKKIDAQIESLRRSTVEGRANREEVQRQITVLEELRRALAGAATGTEVLVSFQKEQERTLKEIERLTKKFSTTLELEEQERQNRITEIANAGLESSNEIERQKLESKRQRIEQELAFERENLAKIEALQGDPDERESAIRDAKLKTAKLAGQLLENEAQQQKQGIAEIEQVTKESLQRLQLAEQERQNQIQELLNQGLIRQDQAERKRLQSTRERTEAEFKAEQEKLDKLEAAEGNNAEAIAAQKQKLAEITGRLLENEFQQQQKLRDLIIKKITEAEQLQARSADLQAKRLERLITLAGQQERVFQSQVSLQQALDRLTKSRFDLATATAETELEALKKAGASQDQIERKEKQIQDLKLQAIQASQLAAQRELEFQIQAEIRANKRLEIEAKIAALKAKSEVVSQQAALEKLKLNPEATPEQIKQAQELLDLTRQQAAEAENLVTLAQQEGTQIQQTAQIRREALQNDQTRERLPFQRPGLQGSPLGALGASPVSAGVAPLPRSPVTPAIAPLQPLVGVEGVPPLPSVSQVRPVIAIPQTEVVNQLKSLEEIVKTISGQVGAVSTRPNVNVTNNNPPPQLPRGNQLGVLAL
1147248..1147290                   attR                                                                                 N/A                 TAATTCTGGATCAAATCTGTCAGAGAGAATGATCCAAAAATCA

#### region 2 ####
2692316..2692329                   attL                                                                                 N/A                 TCTAATAGTTCAAT
2699633..2700709                   PHAGE_Cyanop_PSS2_NC_013021: phage integrase; Syn6312_2747; phage(gi254729563)       8.07e-12            SynechococcusspPCC6312MSQISGQISGQISESVAAVNQRLRNAGVRLTLIVRGNTLSVRGTLPSKDGVGQKRERLRLGLPATEWGVKQAEFRAYQIWSEIVKGTFRWEVKKEKVETFGEVIERFRNSAYRDKTDQQWLAFYKAGLQLVQMDQPFQVRQVELAISGCPDGSWLRFRSVQTWVRILRFLKVSEDSIDKIKKLKGSYQYGSVVKRLIPTDEEISQARLLLKSPEWQKVFALMAIYGLRDHECWHCQVESEEPYRCRVLVGKTGERMVLPLPPHWVDWEPWLHELPRVKFSGNMSVYADRTARYFRNNKVGFPPYSLRHAYAIRASVSYGFPVSMSAKLMGHGVEVHTRIYHAWLSEAQLLETYKRMTT
complement(2700710..2700940)       hypothetical protein; Syn6312_2748                                                   N/A                 SynechococcusspPCC6312MFSRNKYKAGDRIISLEKAKVILETELGIKGWRRNTIKQKIRTGWKFKWIEGVHYINSSRGLAALNIDAIKREILK
complement(2700933..2701271)       hypothetical protein; Syn6312_2749                                                   N/A                 SynechococcusspPCC6312MLEMMTASKQQQEIEQEQVRQEVLTWLNKEYNEVLKSGNIAPEGCWIEIAKCHNRKGLFQVFYRSNQAIFDGKKRKYIGMRNSPKHHQAITAIDRRDYLHSLSIQIKEIQNV
complement(2701264..2702655)       transcriptional regulator; Syn6312_2750                                              N/A                 SynechococcusspPCC6312MELTLSQFSAWSDHLNASQLQVLITIHLLKSSNAQEIIKITQTSKRNVNRIIKQLEKLNLIRVRREPVIEPVTHLAEDGQNWPKNAAFVPRRTNLAQDDRNCPGDAAFVPGWPNVTHDGQENRDIYIGVSSVAEVPNLAQHGQNGPTDAAFVPRMQEPSEPLKSDEPNGNQAENEAKNPASLTLQAIQAALPNLNLKNTNIKELNIDLIPEDPIYTHAHAFPASASVRVCVSEGEERQESPEPKTVTVSAVAVLEAPPTHPEKNDQSPEQISPDSGHISPASPSNSALNTFGCPDYYRKFEERFETKTLPIWRHGPGTGGIKPGFVEFIRKTLDKMGGEHTRGDAIIYIDRREKASDFVTLNARAQDWLDEEKKRNQNELERKKKMNTNIFSEDGKSIDVSDVQAQINVHLIRLNWTKKDALKYMVEHHDWVENIIIREGRFDRLTDEDLIALLLKLRDVDNA
complement(2702646..2702909)       hypothetical protein; Syn6312_2751                                                   N/A                 SynechococcusspPCC6312MIVTIEDRTERKNVTIRMTPQVKRLIQLIAADEQHYVSDVIEEAIILRIVAKQLQKNRSIKEIAKETGLSVEEITLAVQDLKEIQWN
2703078..2703353                   Helix-turn-helix protein; Syn6312_2752                                               N/A                 SynechococcusspPCC6312MPQREFCLLLGVSQSAIQMWESGGSLPSLENLARVAAFRNETTEALVAYLFARPLESQAATVMDQVDQMSMLELSELTKAISHRMLALLSK
complement(2703345..2703677)       hypothetical protein; Syn6312_2753                                                   N/A                 SynechococcusspPCC6312MNEYCFKCLNYAHSNYLMCAIHPSGPPQEPCPEFELSPQEEQWQPEGAAFYNGELIYQPPALSYEERLELLEWHPLFTGRCPNCEMPLHETEQPRIHWDCEHCGWKDDSL
complement(2703674..2704798)       putative transcriptional regulator with HTH domain; Syn6312_2754                     N/A                 SynechococcusspPCC6312MINKPLDSITIDDIQDLIEDNIIEKKTLDYKLIIGDKKEFAIDVSSFANASGGNIIIGVAEEKLDKKKTGKYFLSPIKDIIPDQMIQTIEGIVRDRIEPRVFIDCKHLKYEDGHIFIIRIPKSWNSPHMIKDASRFYTRNSNGKEIFDYIGLRSAFLASESLRKEIKNFRADRVGQIIADEGSIPIKNHPGIVVHVMPVSAFSTGFLIDIANIDPQNRPIPIGVSSWDRRYNFDGVVTFVSNENSVSYAQLFRNGVIEAFESIDSRQYPKLIHDVSVNIIKEIKGYLSLLYKLEVELPILIGISLVNVRGKRFKNDGWSTGEIDRNIIVTPEVILENQHKSIEEVLKPVFDTLWQASGYTRSPNYDHNGSFIGR
complement(2704806..2706893)       PHAGE_Mycoba_Dori_NC_023703: gp42; Syn6312_2755; phage(gi593775732)                  1.65e-47            SynechococcusspPCC6312MSDQPSRRRKDSAKLVWDTKPKRAPNPRDIEFQTAEIVIPNPKQEQGSFDLPLLNLAGSNLPFNQVGTQDIDKSKMNRLIWGDNLLAMQALLAQGYAGKIDLIYIDPPFLSSADYSFQLSIEGQQVTKEASIIERLAYTDTWEGGMDSFLDMIYPRLQLMKRLLSDKGSIFIHLDNNVGHYVKLILDEVFGIKCFQNEVVWQRTDPHNDAINKFGNIHDIIFWYGKQEKPTYYPDAVRTDLSEAGLAEYSLLELENGGIIPYKGNELKKGRRFKLENATWKGSSKRFKWRGVQPSANREWMYDYEGMESALARGELYLRDLQKGSTRCQKKYLDENQGILLQDIWTDTGRMKGGSDYPTKKPEKLLERIIKASSNEGDLVADFFCGSGTTMAVAERLGRRWIGCNLDKVGLQVSRNRMVEQGAKPFLMENIGNYQRHMIYLSGSKIGEMQRIMLKLYGADPRTDRTDLGVRRLEDGTTELVYVGYPDRPVTARKVIELAQDAEILDGTGYKTLVILAWDYDYNYSTEYESRIKKQALKVNVKALTIPPEIYNYLKKAKSEADLDGLRDKITFHEKPYVKISKPQVQDAGNGMVIISLSIDRYVLMNLPIPEKQQAELRKVIKDNFAALIDYWAVDWDYDGITFRSTWQAIRGNGKRASTVITTAQSTELPSKKRTIAVRLVDVFGNDASVITNIL
complement(2706896..2707351)       Uncharacterized protein family (UPF0158); Syn6312_2756                               N/A                 SynechococcusspPCC6312MATIKKEDLELISTILNSSEIDGAIGSIFKRTGHVSISGKDYAIDDPDAPVGTIEEQEEAEEFFDLHFVSIPNLGSKRAYQNMLDFTHTVEYPKLKSDLLHALSQARPFSKFEAVLMEVGSEFERWRKYEEEARLKHAKEWVEEKGFTVEV
complement(2707361..2710171)       PHAGE_Serrat_Eta_NC_021563: putative helicase; Syn6312_2757; phage(gi514361054)      1.56e-06            SynechococcusspPCC6312MPVKQSELILPTLLQDDVEGWRNQGWSGVTQTTAELLHYWFEEERDGKNFHPCQQNAIETVIYCHEILRIQNPYQLYLEFSPANAKVAQAIRSKVLQDELNPITWPKYCLKMATGSGKTWVLNALMVWHYFNALNDEPGQFSSRFLIVTPGKEVQKRILEATKGRDDGGTWIAPDLDEDLFMPRGTRWRDRFYLEQYEPSDFRENLTLTDGPFLAVTNWQQFRFATSSPSVWEDLMGEQEETPKAEIIAELLTTYPDLCILNDEAHHVHAEKRPSADSKTEEELIWRRFMSFLNQKQAECHPDTPRFFQQIDFSATPFFGSGDNKAYFPHIIYDYNLGQASKDMLVKQLFLEQRQGNNLEDLDFRAEREKAEGRKRGEVLGLSLGQKIMLEIGKTKLEQLTQEFKQHGINRKPVMLVLAEETEVADKVGEHLTTLHDPDGNPYDESRVVVYHSKLKDAASKEAEALLNDIDRDNAPLQVVVSVLSVREGFDRTNICVIVMLRASEADLLLEQIVGRGLRLMFPRYKPEYDQIQEMKAEARQALENQEQPDNAFDCLFLVEHPKFKEFYTSYLASQGHLIGIGDSSKQNAGGDLVSVDADVTRIPKYDISWPMQIYDNTPIPNIADIEISKMGHNLVPFDTLQKLSAKTLITDVHAETGTKANTWALEQDYFDYSFFLQNMTRLVTRTSKLSYLTALSSEIAALVDEYVSNRLFNQPIDFTEPECYKVLQNQQLIDFIANQVRAAITEATGDLQYQPGAVWRNLSDVPQLLMRQKNMVAVQRCIYPHQAVEAVKGNFERRVITKLINPSPEVLAFAKLDRKHDLIITWRDDRGIQRKYEPDFLIRTADRIYLLETKGDHLMTDSSTALKAQAAVAWCKSASTVPPPTTQPQQWEYLILKQSIFEANDGASFNALLPLMQIEREGLVAGLYGDLGLAI
2710235..2710432                   Ribbon-helix-helix protein, copG family; Syn6312_2758                                N/A                 SynechococcusspPCC6312MQRLKQNLTSENKSTEYLNVRLPHEEMKALKDYCQISHRTQSDVIREMIRSLPTASHIWKPLATK
complement(2710534..2711778)       PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; Syn6312_2759; phage(gi431811050)     4.12e-113           SynechococcusspPCC6312MFALVDCNNFYVSCERVFNPKLQEQPVVVLSNNDGCVVARSQEVKALGVPMGVPFFKIKDLVTQHNIQVFSSNYALYGDMSQRVMQTLAYLCPDLEVYSIDEAFLDFSGFQQTHPLKHGQVIRQTVLQWTGIPVSVGIGSTKVLAKVANKLAKQQAGVMALSPATVNSALADLSVEDIWGISSRWGLRLRALNITTAAELQSANLGMIRQQFNVVMERIVRELRGESCLPLESVTNPQKSLVVSRSFGQSVTTLTDLQQAVATYISRAAEKLRIRGLTTTHLTVFAQTNRFQDNFESPSTSVTLLKATNHTGTLVGYALRCTESIYQNGRSYKKAGVILQELNPSQSVQHTLFDSPSDGRDEKLMETLDSINQKLGRHTLRYGAMGLKQHWVMRCSQRSANYTTDWADLPNVKA
complement(2711913..2712245)       hypothetical protein; Syn6312_2760                                                   N/A                 SynechococcusspPCC6312MKLLFDHNLSPQLVKLLADLFPESTHVYLLGMDQSEDQEVWNYAQNNDFTIVTRDSDYNELLTLRGFPPKVIWIRRGNCSTTAIETMLRSHLADIQALNDDLTLGVLTLY
complement(2712242..2712466)       PHAGE_Plankt_PaV_LD_NC_016564: hypothetical protein; Syn6312_2761; phage(gi371496159)     9.43e-06            SynechococcusspPCC6312MKYQDRITIEPGKRSGKPCIRGMRITVYDVLSYLASGMTYQEILDDFPYLTQEDILACLSYAAERERQTLLVQA
complement(2712595..2712822)       hypothetical protein; Syn6312_2762                                                   N/A                 SynechococcusspPCC6312MKLDRITLNPFVMGGKPCIRGLRVSVGAIVGLVASGQSIETILVAYPYLERDDIFAALSYAAWRAEEYEVGLVSA
complement(2712892..2713455)       PHAGE_Cronob_ENT39118_NC_019934: protein umuD; Syn6312_2763; phage(gi431811072)      2.13e-29            SynechococcusspPCC6312MSKGGVRPGAGRPKGTGKYGEPTQAIRLPLSVIGQIPQLLERQQPRTTLTELYRPQLGATLPLPLYQMPVSAGFPSPADDYIEQRLDLNRYLIKNPAATFMARVSGDSMIGVGIHDGDVIIVDRSLEPKDGQIVIAVLNGELTVKRLRRKCKRLLLQAENPNYPDIEITDASAFQVWGVVTNVIHAL
complement(2713576..2715768)       PHAGE_Acinet_vB_AbaM_ME3_NC_041884: hypothetical protein; Syn6312_2764; phage(gi100082)     1.47e-28            SynechococcusspPCC6312MLPLEALKHYFGYEAFRPGQADIITASLNQQDVLAILPTGGGKSICFQLPALLKTGITLVVSPLIALMLDQVVALQKNGIAATFLNSTLSAAEARGRIAAIMAGEVKLLYVAPERLVSDSFTALLETIHQTVGISSIVVDEAHCVSEWGHDFRPDYRQLSRLRERFPTIPVIALTATATHRVRTDITEQLSLKKPFVHVASFNRPNLYYEVIEKSRGKVSLSELTGYIKETEGSGIIYCMSRKQVEKLASELNENGISALPYHAGLSNETRTDHQTRFIRDDVQIMVATVAFGMGINKPDVRFVIHYDLPQTIEGYYQESGRAGRDGEPARCTLFFSPGDIKQADWFIQNKVHPETNEPLEDEQRIARQQLRQIAAYADSTLCRRTTLLGYFGEVFGGNCGQCDNCRFPKPKQDWTIEAQKFLSCVARTNERFGIRHIVDILRGSTQDKVIKYGHDKLSTFGIGLDKSIKEWQHLARSLVQQNLVNESDDGYGILTLNTLSWAVLRGQHQVWVSMPNQLSKEKVTVEKEPNLGPIHTGLFQSLRTLRKELADDQGIAPYLIFTETSLKEMARYRPCSLASFSRITGVGDKKLEVYGSTFVNRIFSYCKTHGLSEAMPHFIPREAVPEKKAAGERTRNVCKLFQNGLYPQDIAKSLEMKVQRVYEHLADGIEAGQIASIEKLVSSERQTTMLKAFDKHGADRLKPIYEELNEQFSYEELRVVRALWKVKSK
complement(2715806..2716048)       hypothetical protein; Syn6312_2765                                                   N/A                 SynechococcusspPCC6312MRGGQRKGAGRKSSWKNRETSIIRVPTIIAQQLLEIAHELDKNYPIEQQLSILDVLRRHELNPKIIHANHPNNNQTQKQS
complement(2716048..2716344)       hypothetical protein; Syn6312_2766                                                   N/A                 SynechococcusspPCC6312MKTIEEFEAEIKEKHCAIEVEKIMREYAKSCLESNRLNEYHQLIQKLKEQAIQKIQDSENLFHESIRLRNSGNIDGILAIQLKKALKIFTESVKEEAI
2716524..2716814                   hypothetical protein; Syn6312_2767                                                   N/A                 SynechococcusspPCC6312MDEFSRLFSEVVMSRVLERLDGSTAYLLRGCRVSKSGSSLVVGCPSDQVAIKLSTCLNQSLGQRCQSLGFVQVFFVCPDAFAFQFDLNEFGFVLNI
complement(2716826..2717227)       PHAGE_Mycoba_Tortellini_NC_041888: hypothetical protein; Syn6312_2768; phage(gi100068)     9.78e-13            SynechococcusspPCC6312MPIDRRKYPKNWKSIAHTIKHNANWTCQDCGRPCRKPGVPWKVFIHWLCDYPDKRWIKDTLENDQEKVQRFTLTVAHLNHRPQDNRIENLKALCPKCHLAHDMEHHIANAKATRRRKRERYFQQIGQKSIDFP
complement(2717217..2717420)       hypothetical protein; Syn6312_2769                                                   N/A                 SynechococcusspPCC6312MLERTIYQGYEIETWETELGYGASIDLGHRVFTLTTEAINRKQALKEAKQIIDNIVQGHRRTYQNAH
complement(2717432..2717947)       PHAGE_Strept_O1205_NC_004303: hypothetical protein; Syn6312_2770; phage(gi23455856)     2.13e-12            SynechococcusspPCC6312MTILELSSDLVDLKEEVTFCHDSEDAEELMSSYLIECVDGAKDHKRLDNYVALISEFERQAEARKKEAERLNTLAKIDESLSKRLRTALKNHLENIGLRKISTERYNINIVKSGGLKPLILDPDLDPDDLPEPYKVTLINPDKVAIRAALEAGESLPFASLGERSETLRIQ
2732056..2732069                   attR                                                                                 N/A                 TCTAATAGTTCAAT
