gi|00000000|ref|CP003652.2|  Corynebacterium pseudotuberculosis Cp162 chromosome, complete 2365874, gc%: 52.04%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
464869..465543                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; Cp162_0416; phage(gi16129761)     7.71e-13            MLVLALDTATPDLIVGLVRVPSDTDTGVVVAQRILTDSRQHNELLTPTVVEILEESGQKFADIDRIVVGCGPGPFTGLRVGMVTAAAFGDALGIPVHGVCTHDAIANQLDGQALVATDARRKEIYWSLYSDGVRTMGPGIVAPTELSIPSRISTVSIPEKIGQLLPGPLRDVPQVNLRPLPECLVAVADFSQTPEPLEPLYLRRPDAKEPAPKPRSSAIPKVEI
465544..466035                     Ribosomal-protein-alanine N-acetyltransferase; Cp162_0417                            N/A                 MFLRELTAADAPRCAELETLLFSEENPWSVEDLRAAINHPHTLYIAVVDSLEKGLILGYAGLAMLGPAHDPEFEIHTIGVDPQFQRQGVARLMMDNITFVADRAAGPVFLEVRTTNEPAIRLYESYGFERQGVRKNYYQPSGADAYVMMRTPSAVESNEESGK
466037..467092                     PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; Cp162_0418; phage(gi16130960)     5.54e-75            MIVLGIESSCDETGVGIIELSPDGSMRILADAVASSMEEHARFGGVVPEIASRAHLEAMVPVMRQALDAAGVDKPDAVAATVGPGLAGALLVGASAAKAYAAAWDVPFYGVNHLGGHVAVANLEGEELPHSIALLVSGGHSQLLEVQAVGKPMKELGSTLDDAAGEAYDKVARLLGLGYPGGPVIDKLAARGNRKAIRFPRGLSRADDLRGEHRYNFSFSGLKTSVARYVEKAEREQSVISVEDVCASFQEAVCDVLTHKAILACQDTGAKVLLLGGGVAANSRLRELAAARCQTAGIELRVPRFKLCTDNGVMIAAVAAQLIHEGAPQSGLRIGTDTSLEVEIPLVYAAT
467161..467550                     PHAGE_Bacill_0305phi8_36_NC_009760: GroES; Cp162_0419; phage(gi156564025)            4.81e-17            MYSHSCSPATTAVLEFSQPAQRETSFYGRYIVANVNIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRFDGDDRVPMDIKEGDTVVFSKYGGTELKYNGEEYLLLNARDVLAIIEK
467562..469184                     PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; Cp162_0420; phage(gi526178751)     3.11e-96            MAKLIAFNQEAREGILKGVDTLANAVKVTLGPRGRNVVLEKAFGSPTVTNDGVTIAREIDVEDRFENLGVQLVKSVAVKTNDIAGDGTTTATLLAQAVITEGLRNVAAGANPVELNRGILAAADKAVEKLGERAAEVASAADIANVATVSSRDAEIGDMVAAAMEKVGKDGVVTVEESQSIESYLDVTEGVSFDKGYLSPYFITDTDSQRAELDDPYILLVRNKISSLPDFLPLLEKTVEANKPVLIIAEDVEGEPLQTLVVNSIRKTLRAVAVKSPYFGERRKAFMDDLAVVTNATVVDPEVGINLNEAGVEVFGTARRVTVTKDETIIVDGAGTSEAVENRRQQIRREIENTDSSWDREKAEERLAKLSGGVAVIKVGAATETEVSERKLRVEDAINAARAAAQEGVIAGGGSALVQIAKELRVYAEEFEGDAKVGVNALANALSKPAYWIADNAGLDGAVVVSKIADLPNGEGFNAATLEYGNLIEQGIIDPVKVTHSAVVNATSVARMVLTTEASVVEKPVEAKPQAGGHHHHHHH
469862..470452                     PHAGE_Bacill_Glittering_NC_022766: RNA polymerase sigma factor; Cp162_0421; phage(gi568191091)     8.04e-05            MRMMEEKGLAVAETETELSSLVPRAAGGDSRSLQRVISIIYPKVLSYARIRLSGGRHPTPEDVAQEICLAVATSISKFVDQGKPFMAFVYGIASNKVADAHRAYSRDVANPTEDVPETEVELETPESFALVAAGSNRVKELLDLLGDKPREIITLRVFVGLSAEETAEIVGSTPGAVRIAQHRALATLRKALEQEN
470455..471336                     Hypothetical protein; Cp162_0422                                                     N/A                 MTERRWARDGVEAAQSVEQLQADDQFLTHLSQGVDPTDGQDPLARLFLDARAEIQTNVPQAPTLAMLGLGSAEEFPTGELAPVTNESVDSSQLIDAPSAKVIELPRRRWNNAFAHALVGAAAATLIIAGGGTAIYNAGEGSALYALNQKFFGQTTNTEAVVALASKLDQANDLNAKGDKEGARQLLEQARELVNMLNARDRAQAEERIKEAERGSNVAPVPPPAEPEASSETVVTTMTTTVTETVTVEPTPARSTSTAPSTDRSATSSTSPVASTPSPTPAFELPQPEHSQAH
complement(471350..471766)         Hypothetical protein; Cp162_0423                                                     N/A                 MPMLRQINMVKHVNFDWQMPRDPFADDPNDPASFLDEDEPLPPLSEAEKRHIEEDLRLVQRFKKVLQPRGINGIFFLCEDCNEEHYYDWDIMMENIRATLNGELSPVHEPSLNPNPQAYVPWDYCLGYLDGLEAPRFF
471900..473420                     PHAGE_Bacill_G_NC_023719: gp120; Cp162_0424; phage(gi593777579)                      7.89e-34            MTQQRVSTGGDNPDKVALVGLTFDDVLLLPDASDVIPSEVSTSTQLTRNISLNIPIISAAMDTVTESRMAIAMAREGGMGVLHRNLSIEEQAQHVETVKRSESGMVTDPVTCSPDMSIAEVDALCARFRISGLPVVDDNGTLLGICTNRDMRFEQDFSIKVSEIMTRMPLVVTEEGVTKQQALNLLSANKVEKLPIVDKQGKLVGLITVKDFVKTEQYPHASKDSTGRLLVGAGIGVGEESWTRAGALVDAGVDVLVVDSAHAHSSGVLDMVSRVKKEWGDRVDVIGGNLATRSAAKAMIEAGADAIKVGIGPGSICTTRVVAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDLAKALAAGASSVMLGSMLAGTAEAPGEIVVVGGKQYKRYRGMGSMGAMQGRGLSGEKRSYSKDRYFQADVKSEDKLVPEGIEGRVPFRGSIEAITHQLVGGLRASMGYTGSATINDLWNARFVQITSAGLRESHPHHIQQTVEAPNYH

#### region 2 ####
1847297..1847605                   PHAGE_Strept_R4_NC_019414: putative scaffold protein; Cp162_1644; phage(gi414089993)     1.30e-06            MSEVERLQADLEAARKAEETARAEIAKRDLDGERSKLAAEFKLPAAMAGRIAGATPEEMREDAKALAEAIGPYTGPADKSAGRGSTNASPFDLNAAIAAHYN
1847619..1848164                   PHAGE_Strept_SF1_NC_028807: hypothetical protein; Cp162_1645; phage(gi971745050)     3.34e-06            MAPITLEQAKLNTMEDYDPAIIDEFRKSSTLLDLLTFDRAVSPAGGGATLDYGYRRVKTERGAAFRKLNSEYKTEAATTEKHSVTLAPLGGAFEIDRVIAKLGPATSGEIVFQMQQLIKSTTTKFLDSVINGGTGMAVLNDLDEFLAVLDGPPTALLDNGRVLATFLRTRGGSPIEKSAKP
1848205..1848582                   PHAGE_Rhodoc_E3_NC_021347: hypothetical protein; Cp162_1646; phage(gi509142199)      2.64e-10            MTSYTAKAFREEGWWGVQLIERPNILTQTRRLDQIPDMVRDALKLFPEIEPHPETVTINVVVVGDIESQVAKTLELRNRAAKAQEEATASMRSTAKALHDQGLTYRDVGQLLGVTHQTAKNLATA
1849244..1849879                   Hypothetical protein; Cp162_1647                                                     N/A                 MKKSKLFLCMALTTSLATASIPATAQESDPITKPWLFKKCEGFSVAIQSVHLKDKDQSRIPRWLRAKPNPGDTIKVQFKVTNNSYSNNADATYPKGEGNAYLVDDPLSVRNGVGVTIKPNPIYAWSNTDQKRNFILGRGDSVTVTYNHTITEQDLANRGIPDGPNYPISNSGTATPVCTISPGITYSWSPLSHFFPWLAGFLRSITSFFSR
complement(1850076..1851797)       PHAGE_Flavob_6H_NC_021867: cytochrome c oxidase subunit I; Cp162_1648; phage(gi526120183)     7.97e-13            MTAVAPRLEDYSEPTRPAPTGGARKGTLAWKMLTTTDHKQLGIMYIIMSFVFFFLGGLMALLIRAELFSPGLQYLSNEQFNQLFTMHGTVMLLLFGTPIVWGFANYILPLQIGAPDVAFPRLNAFGFWVTMIGAAAMLSGFLTPGGAADFGWTMYLPLADSIHSPGIGSDMWIVGVGATGVGTISSAINMITTILCMRAPGMTMFRMPIFCWNIFVASVLVLMIFPLLTAAALGVLYDRKLGGHLFDPGNGGAIMWQHLFWFFGHPEVYVLALPFFGIVSEIVPVFARKPMFGYIGLVFATLSIGSLSMAVWAHHMFVTGAILLPFFSFMTFLISVPTGVKFFNWLGTMWKGHVSWETPMTWTMGFLVTFLFGGLTGIMLASPPLDFHISDTYFVVAHFHYTLFGTVVFASFAGVYFWFPKMTGRMLDERLGKIHFWITFVGFHGTFLVQHWLGNEGMPRRYADYLDSDGFTTLNQISTIFSFLLGMSVLPFIWNVIKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTSMPRIRSERPAFELHYPHMVERMRREAHVGHHVEPVSVKTK
complement(1851971..1852150)       Ribonucleotide reductase of class Ib (aerobic); Cp162_1649                           N/A                 MLWGGKGELTLYSSFGLITAGGEVGELVGVMYKYVPTLLCGAYHWNYLENAVFLAELIV
complement(1852266..1853252)       PHAGE_Mycoba_PegLeg_NC_021299: NrdG; Cp162_1650; phage(gi508177953)                  0.0                 MESYDSYLESHKKPVSAINWNSIPDEKDLEVWDRLTGNFWLPEKVPVSNDLKSWGTLNDLEKTTTMRVFTGLTMLDTIQGTVGAVSMIPDAITPHEEAVYTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKIVLSYYEGADPLKRKVASTLLESFLFYSGFYLPMYWSSHAKLTNTADIIRLIIRDEAVHGYYIGYKYQQAVREQTPERQEELKEYTFDLLYDLYDNEIQYTEDLYDDLGWTEDVKRFLRYNANKALNNLGYEGLFPADECKVSPAILSALSPNADENHDFFSGSGSSYVIGKAENTTDDDWDF
1853663..1854184                   Ferritin-like protein; Cp162_1651                                                    N/A                 MTHPILLLSIASMSINEKLAAALNNQITAELEASMVYLQLSYILDDLSLTGMRNWMQAQHKEELDHAAQFSKHLLDRDYRPQIGDIAPPKLDANSAVEAFEASLAHEQKVTAMIRELAEIADSVKDYDSRPLIDRFLEEQIEEEANVKEILDRLRIADTGSGILRIDAELAER
complement(1854257..1856416)       PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; Cp162_1652; phage(gi158079505)     0.0                 MSQSLGKHVAEPVSRTEQLDYHALNALLNLYNADGKIQFDKDREAANQFFLQHVNQNTVFFHDLEEKIEYLVENNYYEPGIIEKYEFAFIKDLFKQAYAHKFRFKSFLGAYKYYTSYTLKTFDGRRYLERFEDRVCMVALTLADGDQNLARNLVDEIMTGRFQPATPTFLNSGKAQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNLREAGAPIKKIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILNFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGKAFADISVSEHYAEMVEDPRIRKSKINAREFFQTIAEIQFESGYPYIMFEDTVNKANPIEGRVNMSNLCSEILQVNTPSLFNDDLTYEEVGEDISCNLGSLNIAMTMDSPDFAKTIETAIRGLTAVSEQTAINSVPSIRKGNDAAHAIGLGQMNLHGYLGREHIYYGSEEGLDFTNAYFAAVLYQCLVASNKLARERGRTFVGFETSKYATGEYFDGFDPADFAPKTEKVAKIFADSSIYTPTAADWADLKDSVAAHGLYNRYLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVYYPAPHMDNENLDYFADAYEIGFEKVIDTYAVATKYVDQGLSLTLFFKDSATTRDINRAQIYAWRKGIKTLYYIRLRQVALMGTEVEGCVSCML
complement(1856567..1857004)       PHAGE_Bacill_SP_10_NC_019487: ribonucleotide reductase stimulatory protein; Cp162_1653; phage(gi418489617)     9.13e-17            MLVVYFSSATENTKRFVQKLGFLAKRIPLHKSSPELIVDEPYVLVCPTYGGGASISGGNTRPVPAQVIRFLNNEHNRSLLRAVIAGGNSNFGLDFGKAGDTIAAKCKVPYVYRFELLGTDEDVRLVRDGLLGNAAALGLLPEPVA
complement(1857130..1857363)       PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; Cp162_1654; phage(gi589892251)     4.29e-25            MSITVYTKPACVQCNATKKALDRAGLDYTLVDISIDDEARDYVMALGYLQAPVVEVNGEHWSGFRPERISSLVAQVA
complement(1857845..1857967)       50S ribosomal protein L36; Cp162_1655                                                N/A                 MKVRKSLRSLKNKPGAQVVRRRGKVYVINKKDPRFKARQG
1858202..1859032                   PHAGE_Bacill_G_NC_023719: gp283; Cp162_1656; phage(gi593777739)                      1.14e-102           MDTLRDTIKNRLRTRSAIDPAEEITARVDFLAQYLSASGARGFALGISGGQDSTLAGRLAQLAVEKLRKEGYPAEFWAIRLPYGVQADEEDARIALAFIRPDHSVTINIKPATDACAADVAQALGLETLNDFNKGNVKARQRMIAQYALAGEKGLLVIGTDHAAENVTGFFTKFGDGAADILPLAGLSKRQGAQLLQALNAPDSTWLKVPTADLEEERPALPDEVALGVTYSDIDTYIEGSGEVSEKAATRIEHLWKIGEHKRHLPVEPGDTWWRR
