gi|00000000|ref|CP003736.1|  Streptococcus suis S735, complete genome. 1980887, gc%: 41.40%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
913976..913987                     attL                                                                                 N/A                 TTTTTTCAATTA
complement(917076..917843)         PHAGE_Escher_RCS47_NC_042128: DNA helicase; YYK_04270; phage(gi100021)               7.05e-21            StreptococcussuisS735MNKRERLEEITRLVNKKGTVRISEIVELLNVTDMTVRRDFIELEEQGVLTKIHGGARSNKAFQYREYSHSEKHIQNKEAKQEIAERAAQLIEDGDTVFLGPGTTVAFLAEAIKNLRLTVITNCMPVFTILSQKKTEDFQVFLLGGEYRQVTESFVGEITNTSLEKMRFSKIFFSGNGLKGTDVMTSTLAEAYTQNIAIKHSLEKYLLLDATKIGKDDFTSFCDLNDATALVTDMNAKDENYQLLSNHIEIISTKS
918122..918877                     hypothetical protein; YYK_04275                                                      N/A                 StreptococcussuisS735MALGNVEKDTEGWIELINQYLQYCIEIGLSPYTQATYKVALAKVLGVSSTNFIATQPRTRANRMNNRVLHKDYRLSNKNNDYWHKVVTSTGLRKSELIHVTGDALQRGRDGRWYLNLAGHKHHTKGRRDRWSPIMATSQEEEEWLVAIFQRAGKKKVFHVPKDLILDDFDGKKVPTALKSHKYPAEYAERVYRSVAREISKIRNRKEIIHLRKELVGISLDRKACKIVTKALGHNRPEEFPHSYAYILLKR
918966..919154                     PHAGE_Strept_P9_NC_009819: hypothetical protein; YYK_04280; phage(gi157311142)       2.49e-07            StreptococcussuisS735MLPQNNSPLLLNRQQVAELLGIDPKSFGKYIRSHPDFQCFMVGKQERYLKSKLVKFIESHCD
919245..920036                     PHAGE_Lactob_Lv_1_NC_011801: integrase; YYK_04285; phage(gi219563220)                2.37e-16            StreptococcussuisS735MSTITKRGNSYRATVSLYKKGEYKRETKTFSNRKDAELWTLEMELEKGRGKNIAERSTLFPDFYRNWVHTVKKTDVREATFINYKRTLVIVDDLFDGIQLKHLDDLVMQKKIDQYAETHSKKTVKELVLKIHGSLKYAYARGLISNDFGHLLKSKGQEQPKRNIPLSITEFKKLRQYCLSHTEDEFNVLVALALETGARRGELLGIKKEDIFEYGIKILRSISPTNDDAQLKTKYSKRDISINEDVYQAVTKLAQIKEGYIFD
920082..920291                     PHAGE_Oenoco_phiS11_NC_023571: Phage integrase; YYK_04290; phage(gi589286605)        9.07e-12            StreptococcussuisS735MGLTKTTFHGLRDTHASFLFSKDISLDYISRRLGHNSILTTQQYYLELMPEKRHQQDAEALNLLNSLSE
complement(920518..921060)         hypothetical protein; YYK_04295                                                      N/A                 StreptococcussuisS735MFNLLNKKAEVSKVAEYWNDTLIERGILSANELLEGKCWRCKSSHGVNMCQIVSSKWSKDTSLANQMVLCLSCQHEKPNVADTEIVWQWLEVENNERYWTLQGMAEYEKMYKKSVLQELWDMGIRDGEEVDTLVNKVTSLSRKNDIVLNRATLAGLFRCEIEQMRRKAFLNWTGIFKLVS
complement(921206..921550)         hypothetical protein; YYK_04300                                                      N/A                 StreptococcussuisS735MKRITEISWNDIYKEWETYANHFGLATPINTEKLRNQKSKDFGKGSLITLDLLADYDTDFEKTAAIWVASFCRDLIQDYAYLLNGRAYLTVNQIYFQALKQFQSEAVIWSKPLT
921681..922481                     PHAGE_Strept_phiARI0462_NC_031942: RNA polymerase sigma factor; YYK_04305; phage(gi100049)     5.36e-81            StreptococcussuisS735MILGDILKEYRSKNKLSMDKFAELSGLTKGYISMLEKNQHPKTKKALLPTMDTLEKVAKGMAISVGELIEQLDSNQDIALTITPSQFKLFQQPIHPEVLTLDNELKGDFHAQWLTFGQEQLAAMQTASVTPSASILHLDDYRERIELPVPGKVSAGTGYWQDTDMNNLVSFYNDEIPDNQSYDTIAQVVGDSMAPHIEDGDYLFIRLTPHIPLNTIGIFSVNGENFVKKFKGDYLQSLNSDYDDIYFSPEDDIRPIGQVVDIYSPD
923083..923094                     attR                                                                                 N/A                 TTTTTTCAATTA
complement(923144..924304)         PHAGE_Aeropy_1_NC_028268: hypothetical protein; YYK_04310; phage(gi948298243)        3.46e-26            StreptococcussuisS735MLNLKEYGIEMWPEEKIQAFRKALLDWYDANKRDLPWRRTKDPYAIWVSEIMLQQTRVDTVIPYYERFLHHLPTISDLAQAPEEVILKLWEGLGYYSRVRNMQKAAQQMVEDFDGQFPTTHAAISSLKGIGPYTAGAISSIAFNLPEPAVDGNVMRVLSRLFEVDYDIGLPANRKIFQAMMELLIDSERPGDFNQALMDLGSDIESPVNPRPQDSPVKAFSAAYLNGTMDKYPIKAPKKKPIPVAYQGFLIRNKDNQFLLEKNNEAGLLSGFWSFPLLEKGAIVDKQVSLFEVAEEVVQPDIRQSFTELYGLTVDWQEQEFGIVQHIFSHRKWQIEMVEGVAETLNLPESKELKWVSVEDFPTYPFAKPQQKMWENFIKEKEKQKS
complement(924482..924868)         Phenylacetic acid degradation-related protein; YYK_04315                             N/A                 StreptococcussuisS735MLDKLNLQPITVLDDYQATMLNEKEVLMTTKVTEKSLNPYGMAHGGFLFTLADSVAGLTTVASGSYSVTLQSNIHYMKAAKLGDTLSVIGSCTHDGSRTKVVEVKIENQDKQLLASASFTMFVTGKVE
complement(924858..926600)         PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; YYK_04320; phage(gi9630145)          2.13e-25            StreptococcussuisS735MRQSSFKELVRLVLHQPLRMSLMLVGTLVQVLLTVYLPILIGQAVDAVLIANGQVLLGILGKMVMVILLNTLVQWYLPLVTNRLVYGMVADLREQVYVKLHQMPLSYLDRQSVGDLVARFSSDSEQLTNGLLMIFNQFFIGISTIFLTIFTMARLDLTMMLVVVALTPVSLLVARYIAKKSYGYYRQQTQARGRQSQLLEESISQLTLVQSFNAQEQFTQGFQVVNDQYATYSQQAIFASSTVNPSTRFVNAIIYALLAGLGALRIMAGNFTVGSLTTFLNYASQYSKPFNDISSVLSELQSALACADRLFAILALDSIDDQAERKIDSEELKGAISFDNVSFSYSPERSLIEHLDIAVKAGQKVAIVGPTGAGKSTMINLLMRFYDVTAGQIVLDGVPISQYSREDLRRQIGMVLQETWIKSGTIHDNIAYGYPNATRELVIEAAKAANADFFIRQLPQGYDTVLADGGEGLSQGQRQLLSIARVFVKIPKILILDEATSSIDTRTEILVQEAFAKLMEGRTSFIIAHRLSTIQSADLILVMVDGKIVEQGNHEALMAEQGVYYQMQTSQQTEEDESVR

#### region 2 ####
1262285..1263448                   PHAGE_Spirop_1_R8A2B_NC_001365: putative transposase; YYK_05980; phage(gi9626114)     2.52e-14            StreptococcussuisS735MKNKHLTLSDRNDIQIGIEQLKPFSAIAAKLGKDPSTISKEVRRNRVIKENSSTSNCEACPLLKKTPYVCNACPKKRSNCGYQKQFYYAKRAQLDYEVKLSDSRTGVALNKEEFYRMDEIVSAAIQKGQHLNHIIASNEMSASRASIYRYLEKGYLSTKPIDFPRVVKFRKRRIRNLQPIPKIAKEGRSYEDFQRFLTEKGISYWLEMDTVTGRIGGKVLLTFNLSFCNFIFAQLLDNKTANEVAKHLYAIKNDLHQKEMDFCEIFPVILTDNGGEFARVDDIEMDVRGESKLFFCDPNRSDQKGRIEKNHTLIRDILPKRSSFDNLTQEDINLVCSHINSVKRASFNGKSAYELFTFTYGEELATLLGISKIDPENVIQSPRLLDK
complement(1263791..1263878)       tRNA                                                                                 N/A                 GGAAGATTACTCAAGAGGCTCAAGAGGCCGTGTTGGAAACGCGGTAGGCGTGTAACAGCGTGCGTGGGTTCGAATCCCATGTCTTCCG
complement(1263884..1264234)       tRNA                                                                                 N/A                 GGGGTTGTTACGGATTCGACAGGCATTATGAGGCTTGTTCTGCAACTCATCGGCAGATGTAAAAATGCCAGTTAAATATAACTGCAAAAAATACAAACACTTACGCATTAGCAGCTTAATAACCTGCCTGCGTGACCAGTCGCGAATTGCTTGTGTTTGCTGATTGGTCTTAAAATAGCAAGCTACGTTGGGATTGAGTCAGGCAGTTCCAAAAGAGATTTACTGACTCGCTTGGTCTAGGTTTGAGTTATGTATCGAGTTCAAGTTAAAGTTAAAGCAAGACATAACCTATGGTTGTAGACGAATAAGTTAGCAGGTGTTTGGACGTGGGTTCGACTCCCACCAGCTCCA
1264344..1264937                   hypothetical protein; YYK_05985                                                      N/A                 StreptococcussuisS735MYKFWQKTIQVLSILTLIGTAIFLFWLYKIGILNDQNVLSDLIKSQGALGSLSFLAIQIIQVVFPIIPGGVTTVVGFLVFHFWWGFFLNYLGISIGSIILFWLARRYGKKFCLLFMSEDTFYKYESKIDNKRSYEIFFILCMLSPISPADIVVMITGLTSMSYRKFIMITLLCRPFSVVAYSFFWIYGSQWLQQLLG
complement(1265077..1265286)       PROPHAGE_Salmon_Ty2: transposase; YYK_05990; phage(gi29143766)                       3.66e-11            StreptococcussuisS735MIFDKHANLKYKYGNRKFWARGYYVSTVGLNEKTVAKYIREQEKNDIALDKLSVKEYEDSFSDSSFRTR
1265639..1266025                   PROPHAGE_Escher_MG1655: predicted transposase; YYK_05995; phage(gi16131356)          4.40e-23            StreptococcussuisS735MEDFIEMNESVLGEYVDLSVGCLSHDTLERVVSMVNPDFLKELKLSFEASSETTDFSKLIAVDGKTIRGNRGKHQSPTHIVTAYDGGNRISLGQVAVEDKSNEITAIPRLLCQLDLRKSVVTIDAMGT
1266071..1266421                   PROPHAGE_Shewan_MR-1: transposase, putative; YYK_06000; phage(gi24373689)            8.67e-11            StreptococcussuisS735MAVKGNQGNLHEDIDLYFSDAKLLSTLTEKGCHYQTIEKARSQIEVRDYWVSHDVKWLSQRHPKWKKLRGIGMTKNIIDKDGVITEEVRYFILSFKGDVQTFSQVVRGHWSVESLH
1266422..1266628                   transposase; YYK_06005                                                               N/A                 StreptococcussuisS735MLDVVYREDKNQTLDKRAAFNLNAIRKACLHLLQMMTFPKEKLSYRRKQRYISVHLEDYLPQLFGNRG
complement(1267053..1267376)       metal-sulfur cluster biosynthesis protein; YYK_06010                                 N/A                 StreptococcussuisS735MTYTEDQIKDIQERIFHALEDVIDPELGIDIINLGLIYEIRFIEGKAEIDMTLTTMGCPLADLITDQIHDVLKDVPEVTEVDVRLVWSPAWTVQKMSRYARIALGIK
complement(1267545..1268663)       PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; YYK_06015; phage(gi331028036)     1.13e-48            StreptococcussuisS735MTNKKDKKTEVTTFDVQVAEFIRNHKKQGSATDDEINDQLVIPFTLDADGIDDLLQRIQDAGISIVDKEGNPSARAMQVEEEPELSDEELLGSTSAKVNDPVRMYLKEIGVVPLLTNEEEQELALAVEAGDPEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIAERMDMTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED
complement(1268666..1270456)       PHAGE_Helico_phiHP33_NC_016568: DNA primase; YYK_06020; phage(gi371671350)           1.48e-46            StreptococcussuisS735MLSKDKITEIKQALNIVDVIGETVALTKAGRNYVGLCPFHGEKTPSFNVIEDKQFYHCFGCGKSGDVFKFVEEVRGVSFADAAAILAEKAGFQIDVTPSYHQEEKRVSPHQVLYDIHRDAAKFYHALLMTTKMGEEARAYLHQRGLTDDVIKTFQLGLAPAEQNILYQKLSGQYDEESLLNSGLFNPSENNIIYDAFQARIIFPLADEYGRIVAFSGRIWTEENRNNKQLAKYKNSRSTAIFNKSYELYHLDKAKAVIKKQRETYLMEGFLDVIAAHRVGIDNAVASMGTALTREHVAHLAKFCKKIVLTYDGDKAGQAATMKALDELQDFQVEIVSLPDNMDPDEFLQKNSEEALQQVLTKSRISDVEFLIQYLKPENPDNLQMQIEFVDKIAPIIAKVSSITAQNSYIYKVADLLSDFDYNQVEQAVNAVRLNQRQERTQQVFQSQTGQSYLPPVQTIARITSLIRTENHLLYRMVEHPYILNEFRLREDFYFATPELQAIYDMLKKSGEITSFELSQLNDSAQQAWYRMQEERLPDEVSPHEIEELEIRRDKELLKKENQHLARKIREHSHVGNADIALDELQKLLDRRRQME
1270638..1271003                   large-conductance mechanosensitive channel; YYK_06025                                N/A                 StreptococcussuisS735MLKDLKAFLFRGNIVDLAVAVVIGGAFGAIIKSFVNDIITPLILNPALKAANVQNIADLAWNGVKYGSFLSAVINFLIIGTSMFFVVKAAEKAMPKKVEEKAPAGPTQEELLAEIRDLLKK
complement(1271094..1272107)       PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: hypothetical protein; YYK_06030; phage(gi100085)     6.69e-39            StreptococcussuisS735MSILVTGGAGYIGSHTVVELLKLGKEVVIVDNLSNSSILVLDRIETITGKRPTFYELDVADKEALRQVFENENIEAAIHFAGYKAVGESVAKPIMYYENNIMSTLALVEVMTEFSVKKIVFSSSATVYGLNNPSPLVETMPTSATNPYGYTKVMLEQILRDVEVADKEWSIALLRYFNPIGAHESGLIGEDPAGIPNNLMPFIAQVAVGKREELSVFGNDYDTIDGTGVRDYIHVIDLALGHIKALEKISTTTGVYTYNLGSGQGTSVLELVKAFEKVNGVPVHYKLVDRRPGDVATCYANADKAWKELNWKTEKTIEDMCQDTWNWQSKNPNGYEG
complement(1272211..1272387)       PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; YYK_06035; phage(gi460042545)     6.82e-07            StreptococcussuisS735MSKTVVRKNESLDDALRRFKRAVTKAGTLQETRKREFYEKPSVKRKRKSEAARKRKKF

#### region 3 ####
1333746..1333931                   PHAGE_Strept_20617_NC_023503: hypothetical protein; YYK_06330; phage(gi588295142)     1.62e-23            StreptococcussuisS735MNPVDLFNQVKELIANKDFDGAKQFIEENKDQFGEYLEQAKGLLSGSEGVNGLLDKVKGLF
complement(1333964..1334605)       PHAGE_Strept_VWB_NC_005345: hypothetical protein; YYK_06335; phage(gi41057269)       2.52e-10            StreptococcussuisS735MIEWIFFDLGSTLLDEEAAYGYYIDKCVKKLESLDIEVSSDSYKKKMVEYAHKSLDPIRSTWHYFAPTEPRPLWTNEGVSLYPETIDALEKLSQNYRLGIIANQSSSIRELLKEWGIESYFQLIILSEEVGLSKPNTAIFTLALQKTNIPADRVVYVGDRFDNDILPAKSLGMWTVRILTGFGKHASENEKLKSDWIIPSLQEITNIFEQTKN
complement(1334772..1335032)       PHAGE_Gordon_CaptainKirk2_NC_031072: DNA polymerase; YYK_06340; phage(gi100036)      5.42e-12            StreptococcussuisS735MYHLEYSKKAQKQIMKLDRQIQRLLFAWIDKHLEGTDNPRANGKGLTGNHANEWRYRIGDYRLICDIQDDKLVILALEFGHRKDVY
complement(1335034..1335255)       hypothetical protein; YYK_06345                                                      N/A                 StreptococcussuisS735MSTVTIRLNQEEEVFFKSYAQLTGQSLSSLFKKALERDIEDEYDLKIYHQAYDEYKADPETISHADFKKELGL
complement(1335565..1336872)       PHAGE_Strept_20617_NC_023503: enolase; YYK_06350; phage(gi588295080)                 0.0                 StreptococcussuisS735MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNVIADAIIGFDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEVPLYTYLGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPSFKEGLRWGAEVFHALKKILKARGLVTAVGDEGGFAPKFEGTEDGVETIIEAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKRVQLVGDDFFVTNTDYLARGIKEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAVYKGLNSFYNLKK
1337022..1337474                   PHAGE_Strept_20617_NC_023503: hypothetical protein; YYK_06355; phage(gi588295079)     2.49e-32            StreptococcussuisS735MNDLNTTILQKASGETRLNPDEQRLYMGTYRERVVLIVSFDDLSSEVVGNKFDTICQKLANRYSPLFLKLSPALSDKQQISLLKIAQTFGITTAIIDEKIGQSPYALVFHTNHAVDNEEVSLESIFPNLISKPEEKKEDAKPSFWKKLFG
complement(1337481..1337711)       hypothetical protein; YYK_06360                                                      N/A                 StreptococcussuisS735MELVKYVAIILFIFICLAKLVSVMRLSEKERVTEMNVIKANGAMFFFNEKNERGRLLGILCLTCIIFTLIFILLYR
complement(1337702..1338829)       PHAGE_Strept_20617_NC_023503: glycerate kinase; YYK_06365; phage(gi588295078)        5.05e-99            StreptococcussuisS735MHILIAPDSFKESLSATKVAEAIKKGFSKVYPQAGYDLIPLGDGGEGTVESLMQALSLDGTQTWVTGPFGDKIKVSYAVKDDLAVFEMAEIVGLASIPHERRSPLFIKTQGVGELIVELVQNGVKRIFIGVGGSASHDGGIGMAAGLGVKFYNREGKEVEAIGAHIGEIVSFSTEDMLVDLSQVRIDLVTDVENPLCGPAGATFVFAGQKGLTSAEFELVDKKMESFYKLVNPMLLDLAGAGAGGGMAAGLVQFAGARIRKGIDFVLDQLDFDHRVTKAGLVVVGEGRMDAQSLSGKTPIGVARRTPTGIPIIAICGSLKDDLPEFPFENICAAFPIIASVESLEDTLQKAEKNLVRTAEQVARILQLGGQQRWN
1338937..1339587                   phosphatase; YYK_06370                                                               N/A                 StreptococcussuisS735MYQTILFDLDGTLTDSGQGILNSVAYALEKMGIEEPDTANLNRFIGPPLYESFSRFYQLSPEDTQSAVDAFRVYFKEKGMFENQLYPGIIPLLEELRTAGKTLVIATSKPEIFAKQILEHFGISHYFDVIAGASLDSSRISKADVICYAINQLEAFPNHAVMIGDREHDIEGARMHQLPAIGVLYGYGNKQEFEKAGATMIVETVQDLKRVLLTTE
complement(1340024..1341226)       PROPHAGE_Escher_CFT073: transposase; YYK_06375; phage(gi26248352)                    7.07e-14            StreptococcussuisS735MRVVFGIDVSKASSEVAILVNGEKVHNYTMSNDAIGFSRLLGDLKTVHKPEIIFEATGVYSRRLQAFLDEHGYAYTRLNPLEAKKQLDSLRVRKTNQIDAEKLAQSQCVLNRKPTYVQEKVYQNLRDLSRFYQNLTEDIVRAKNRLHKVLQVTFPELENILSTPTGEQYWNLVITFPCKDFVLDLSKNELSKSIRQSTSKRISDKRVAYLAEKLTALANQSYCAVKKTSPILEEVHYYAKELLRLSEQRQAVLDQMVELAQPLPEYDILLSIPGIAETTATSIIGELGDIRRFQSANQINAFIGIDLRHYESGNFLAKEHITKRGNPYARKILFKCIHNIASVSHTNPCHIADFYEKRKRQSQTTSTKPHTIASIHRLIRTMYYLIMHNKLYDYASTQNR
