gi|00000000|ref|CP003922.1|  Streptococcus suis SC070731, complete genome. 2138568, gc%: 41.21%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
650395..650406                     attL                                                                                 N/A                 ATCTCAAAGGAA
650400..650411                     attL                                                                                 N/A                 AAAGGAAAACAA
658696..660501                     PHAGE_Clostr_phiCTC2B_NC_030951: methyltransferase type 11; NJAUSS_0617; phage(gi100001)     6.84e-34            StreptococcussuisSC070731MKTNNVEIIKADSLVRRRGVKVERHLKRVAAYCRVSSDSEDQKNSYESQVRHYKDYISQRSDWELAGIYADEGISGTQVGKRQDFQRLINDCVNGEIDYIVTKAIARFARNTLDTLKYVRMLKDMQIGVYFEEENIDTLTMDGELLLTILSSVAQQEVENTSAHVKKGLKMKMQRGELIGFQGCLGYDYDVETKQLSINKKEAKIVRYIFERYLEGIGGKVIARELDELGYKSPRGLDHWNDTTVLGIIKNEKYKGDILMGKTFTVDPISKRRLSNFGEEDKYYIKDNHEPIISKEDFEKAQEIRLRRAGNKKTVANVNGKRERYSKMYAFSSMLECGFCGSILSRRSWHCRSDYRKVVWHCVTSIKKGKKFCKHSKGLEELAIEGAFMEAYRQLYHSNENLMTDLLETIESELNDNSLNKELKRITNKLRTLLKKEENLVNLRLEGKISDTIYNEKYNEISSEKEFLAEEKVNIETTLKSEIDVKKRLTEFKHLLSSQKMLTEFDRAVFESIVEKIIVGGVNSDGEIDPAMLTIIFKTGETQNKDGKQFKSKRKNAKLETDKLCPQNSDEDKKLYSQGTDYTRGVCCSACKSLETFERKG
661426..662643                     Macrolide efflux protein A; NJAUSS_0618                                              N/A                 StreptococcussuisSC070731MEKYNNWKLKFYTIWAGQAVSLITSAILQMAIIFYLTEKTGSAMVLSMASLLGFLPYAVFGPAIGVLVDRHDRKKIMIGADLIIAAAGSVLTIVAFYMELPVWMVMIVLFIRSIGTAFHTPALNAVTPLLVPEEQLTKCAGYSQSLQSISYIVSPAVAALLYSVWELNAIIAIDVLGAVIASITVAIVRIPKLGNQVQSLEPNFIREMKEGVVVLRQNKGLFALLLLGTLYTFVYMPINALFPLISMEHFNGTPVHISITEISFAFGMLAGGLLLGRLGGFEKHVLLITSSFFIMGTSLAVSGILPPNGFVIFVVCCAIMGLSVPFYSGVQTALFQEKIKPEYLGRVFSLTGSIMSLAMPIGLILSALFADRIGVNHWFLLSGILIICIAIVCPMINEIRKLDLK
662763..664226                     PHAGE_Bacill_G_NC_023719: gp245; NJAUSS_0619; phage(gi593777701)                     4.96e-12            StreptococcussuisSC070731MELILKAKDIRVEFKGHDVLDINELEVYDYDRIGLVGANGAGKSTLFKVLLGELIPPGCKMNHLGELAYIPQLDEVTLQEEKDFALVGKLGVEQLNIQTMSGGEETRLKIAQALSAQVHGILADEPTSHLDREGIDFLIGQLKYFTGALLVISHDRYFLDEIVDKIWELKDGKITEYWGNYSDYLRQKEEERKRQAAEYEQFIAERARLERAAEEKRKQARKIEQKAKGSSKKKSTEGGGRLAHQKSIGSKEKKMYNAAKTLEHRIAALGKVEAPEGIRRIRFRQSKALELHNPYPIVGAEINKVFGDKALFENASFQIPLGAKVALTGGNGIGKTTLIQMILNHEEGISISPKAKIGYFAQNGYKYNSNQNVMEFMQKDCDYNISEIRSVLASMGFKQNDIGKSLSVLSGGEIIKLLLAKMLMGRYNILIMDEPSNFLDIPSLEALEILMKEYTGTIVFITHDKRLLENVADVVYEIRDKKINLKH
complement(664344..664607)         hypothetical protein; NJAUSS_0620                                                    N/A                 StreptococcussuisSC070731MDYYSESYQDFERDFYRYSNMNIPLTFLTDDILKTMATSRKNYFVLNKEKARDNRDHFFIFEVSTVDENPLIYHYTYKKTTIYLAEK
complement(664630..664998)         PHAGE_Lactoc_PLgT_1_NC_031016: hypothetical protein; NJAUSS_0621; phage(gi100003)     2.76e-05            StreptococcussuisSC070731MIDRSYLPFQSAREYQDTKMQKWMGFFLSEHTSALTDDANKVTYMSDLSLEKKLLLLSQVYAGQLNTRIHVVEKNNRVSYTGTIPSLTKDFILIKTTTGHINLKLKDIVSIELVEEVLYESA
complement(664995..666284)         PHAGE_Bacill_SPbeta_NC_001884: IMPB/MUCB/SAMB family protein; NJAUSS_0622; phage(gi9630142)     1.34e-64            StreptococcussuisSC070731MSRADNSAGLILASSPMFKKVFGKANVGRSYDLPFDINTRKFSYQNAWKQGIEVTPKYKSFIEHWAKRTLIVPPRMDRYIEKNLEIQHIFQDYAAPDDILPYSIDEGFIDLTSSLSYFISDKSMSRKDMLDNVSAMIQRDIYRKTGIISTVGMSNSNPLLAKLALDNEAKKTATMRSNWSYEDVETKVWAIPKLTDFWGIGSKTEIHLQKLGIHSIKELANFNPDILKKEFGKVGVQLWFHANGVDESNVHEPYKPKSRGLGNSQVLPRDYRTQREIEIVLAEMADQVANRLRSAHKKATVVSIHIGYSRTEMKKSINAQKKIEPANLPKTMVSHVLELFRKKYTSGAVRQIGVSYSGFVDESYTLLSLFDDVEQIEKENRLQTAIDVVREQFGFLAIQKGTVLTEGSRNIERSKLIGGHSAGGLEGLK
complement(666533..666760)         hypothetical protein; NJAUSS_0623                                                    N/A                 StreptococcussuisSC070731MKLKDILELGTYGFNPDCKVEIFNMDNFEERLENEGFDEILIPQNDDVTIYPYAFLIEDSILIAMTEEDDNTNEC
complement(666763..667452)         PHAGE_Strept_phiARI0131_1_NC_031901: hypothetical protein; NJAUSS_0624; phage(gi100004)     6.16e-24            StreptococcussuisSC070731MFSGIRLKEKRIERKFNQSEIAYKLGINRASYSKWESGKSIPNQKNLSAIAKILDVPVTYFESEYNIVNNYLQLTPGNQLKAEDYVEELLLSQQTSNVIPLFSVQVLSDIQLSAGLGEGFFDEFETETVYSDEEQYGYDIAAWIEGDSMEPVYKSGEVALIRSNGFDYDGAVYALSWNDSVYIKKLYRDEDGFRMVSLNKNYPEKFIPYEDEPKIVGLVVGHFMPVEGV
667728..669551                     hypothetical protein; NJAUSS_0625                                                    N/A                 StreptococcussuisSC070731MPITEYIKRKFTNQIKSDIHSNILLDIKAKIETTVESWQVFSKELPNIKYIKVTPFQKDYRTIRLLVNVTSETHFEFVCKDKTEIRDIQRKHTIEYLLFFDDEVIMSLVEIGEHRKVKFDSETQLDSTLLPYMYQTKYEEEAEQFLNTFYSSALKLPQPIDPLIAINSLGLTLLESPLSPDGSIRGQSHFRSEIARVYDHTYNSYKSLVVSEGTVIYDASKFVKGNKNLTLIHEAYHQYRHRPHIMMKEFLLSQDDYKSRDKDFKNARMWIEKQAKVVPPRILMPRSTFCKKALELITEIAENNKRTGMLDILQITIEELADFFHVSKQSARVRLIELGFDEVRGVLEFVDGRYVNNYAFNKLKVNHNQTLTISEQQMFDLYASNSDFRELIDSKRYIYVDGHVVINSPEVVWYFIKYPLISPAALEKLDEYAIIFDIKRKEYEEMGFEEDFTLYLLHPSSYKFEISYKHGIEYSIDERKLEVETEQRNREFTLFRQLPNDFTEAMNKVKDYQEETFPKIAEAVDSSESTIKRLFKGTGGSLQLFVLVLVYLELPDFINQYLLSLSNFKIKNGEKEDMAYQYLLNHFQGQSVAAAKQFLTKRGISTK
669885..670454                     hypothetical protein; NJAUSS_0626                                                    N/A                 StreptococcussuisSC070731MTINVNFFNYCQAQSSSTGVHPTEGEVLAPMFVQDYYMTSHHSGLLRGTFRQCRIMGIPILTAFVPVAEEDYEQMVWWYNNSVNDYLKDFRKPSKNAPRVSSWEAFTEKQDLPVIDDGIELYLFMDQFEFLKSKLAESNFQAPEILEMLFKGYENKEIFEKLGVQKSAGYNKVNNTKKEGIELYKALNK
complement(670493..672448)         PHAGE_Coryne_StAB_NC_048780: HNH endonuclease; NJAUSS_0627; phage(gi100046)          0.0                 StreptococcussuisSC070731MPIKELSIDIETYCEIDLRKSGVYRYAEDDSFEILLFAVSVNNGPVTVYDLSKEKLPQDILEALVDDRVIKWAFNASFERVCLSNWLKKYHPDLLLDRFLSPVSWRCSMIWSAYLGLPLSLEGVGTVLKLKDQKMREGADLIRYFCVPCKPTKINGGRTRNLPHHAPDQWATFIDYNRRDVEVELAIKERLKNFPVPDFVWDEYLQDQIINDRGIGIDVDFVKAAIKIDTESKAQIQEELKALTSLENPNSVLQMIGWLREHGVTTDSLDKKAVKELLKTVDDKTSKVLKLRQQAAKSSVSKYQAMMNCVCKDGRARGMFQFYGANRTGRWAGRLVQLQNLPQNHLPDLEEARKLFKTGDLEATELLYDTQDTLSQLIRTAFVPSKGKKFIVCDFSAIEARVLSHLAGEKWRSKVFELGKDIYCMSASQMFGVPVEKHGQNSKLRQKGKIAELACGYGGSVGALKAMGALDMGLSEEELQPLVNSWRQANPNIVLLWWDVDNAVKTAVKEQIPTSTHGIQFEVRSGILFITLPSGRKLAYIKPRIGENQFGGESVTYEGTGTAKRWERLESYGPKFVENIVQAISRDILAYSLKQLKEFKIVGHVHDEVIIECPMEQKIDKIASLMGIAPDWMSDINLRADGYECLFYQKD
complement(672683..673231)         PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; NJAUSS_0628; phage(gi100017)     8.09e-68            StreptococcussuisSC070731MTTKVITGPNTRFSYLNANEPKSINGSTPKYSASLIIPKDDTVTVNKIKAAIEQAYKEGESKLKGNGKSVPALSTLKTPLRDGDLERPDDEAYKNAYFVNANSPHKPGVVDGNRQEIIDTSELYSGIYGRASITFYAFNSNGNKGIACGLNNLQKLRDGDPLGGRTRAEDDFATEDDDDFLN
complement(673236..674276)         PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; NJAUSS_0629; phage(gi100016)     2.23e-100           StreptococcussuisSC070731MPDVNSEFALEGTDAHELCAYLVEKALGRNARDPTEDLAFYNHEMQDCAEEYRNYVMEQVEKARGYSRDPTVLIEQRLDFSKWVPEGFGTGDCLIVADGLLQVIDYKHGLGVLVDADHNPQMMCYTLGALEMFDGLYDFDKVTMTIFQPRKHNISTFEIEKTELLEWAENELAPKAELAFKGEGDMQSGKHCQFCKLKTVCRKRAEDNLALAKMEFANPATLDNEDIAEILPKLDLLISWANDIKAYALNQATDGYSIPGYKLVEGRSVRKFSDESAVSHAVIEAGYDPYEKKLLTITAMTKLLGKKTFNDLLGGLVIKPTGKPTLVPIDDSRQEMNLAKNEFKED
complement(674350..674634)         hypothetical protein; NJAUSS_0630                                                    N/A                 StreptococcussuisSC070731MEETAKYYLRLVDEFKKLLSTDGETVTEPISPKSEPQREIQLEDVRAVLATKAKDGFKNEVRALLNTYGASSLSALDPKHFAAVLEEAGGIGND
675072..677357                     PHAGE_Lactob_A2_NC_004112: putative primase; NJAUSS_0631; phage(gi22296557)          1.76e-56            StreptococcussuisSC070731MQFTLSHSGQTGVQTTTVYPNQVTITDEISIQTVAQFDHVAGLFLNNTRSNTNFIKSDVLVMDIDNDHTENPDEWLTEEVLKDIFADYNFALVTSRSHLKAKGGKAPRPKFHIYFQINEVTDKDVYVAMKEELCNQYKFFDDNAKDAARFFFGNPNAQVIWYDSWLTIDEDLFQAVSIDDEEDFDADFYTPSSGPIQQGSRNSTMSVFAAKILKRLGVTQEARDGFDEQAQKCVPPLDKAELDTIWGSAVRFYNRTIKTSKSYVTPDAFNRETLKPDDYSDVGEAGVLAREYANKLAYTNATDYLYYDGTHWRENKQLALGAVVHFTDEQLAEANALLESADKQLQSSGIDELTIKAGGKRLENAVETPLQLKYLKAYLAAKEFHKFVMKHRDYKNLMAVYNTAKPMLSVELSELDSDDLLLNTPEATYDLRKGINGQQEHNPEDYITKITAVSPSDQGMGLWQETLATFFCNDQELIDYVQEIIGMAAIGKVYQEHMIIAYGGGANGKSTFWNTIARVLGSYSGKLSADALTMSNKRNVSPELAELKGKRLVIASEMAEGMRLNTAVVKQITSTDEIQAEKKYKDPFHFVPSHTLVLYTNHLPKVGANDDGTWRRLVVIPFNAKITGRSDIKNFADHLYDNAAPAILSWIIEGAEKAIKANFKTKVPTAVSSSVKAYREANDWLGHFLSDCCQVGDQLTEKSGELYSQYRAYCAKNMEYTRSTTDFYSALDQAGFKRKRTSKGNLILGLKLVDDGYDFLD
677624..677923                     PHAGE_Coryne_StAB_NC_048780: recombination protein; NJAUSS_0632; phage(gi100049)     5.10e-24            StreptococcussuisSC070731MKGFRTMREKYVEQALVKSVKARGGICPKWVSPSFSGVPDRLVFLPNGKFGLVEVKAPDQKPRMLQVSRHKLFEQLGFTVYVIDRIEMIGEVLDEIDIT
677904..679280                     PHAGE_Coryne_StAB_NC_048780: hypothetical protein; NJAUSS_0633; phage(gi100051)      3.49e-161           StreptococcussuisSC070731MKLTLHNYQVVVKDFIIAHPYAAVILDMGMGKTATTLSAVNELMFDRFEVTKVLVIAPLRVANTVWSDEIEQWAELRHLRYSKIVGTPKQRKVALQKDADVYIVNRENLPWLVEQCSPYFKWDMVVIDELSSFKSWQSKRFKAFMAMRPYMKRIVGLTGTPSSNGLMDLFAEFKVIDGGERLGRFIGEFRSRYFEEGRRNGNIVYEYIPMDYAECQIQDKISDITISMKALDYLDMPELISTKKLVRMSEKEKAKYSQFKKEYVMSELDGLEVTAANAASLTNKLVQLSNGAVYSDDHTVVALHEQKLDALEDILESANGEPVLVAYWFKHDLARIINRIEKLRVKSRVLKTEEDIREWNKGNVPVGLLHPAGAGHGLNLQKGGHNLVWFGLTWSLELYQQTNARLWRQGQESETVVIQHIVTEGTIDEEILKALENKDAQQERLIEAVKAQVGGADG
679273..679749                     hypothetical protein; NJAUSS_0634                                                    N/A                 StreptococcussuisSC070731MDKAEHILTHYNELKSDLEMLKYRLEHFKPVTENEVIGSLVFEKSDEPRVKSTPTNRRSEMIALNFREKMIQENEEQLADLSQRYIRLANDLENFEMALKFLKGDLYDFAQSMLKTDSNWDSLMREFHISRSTVRNWRRKVLDHVREVYLKMGFSLEK
680147..681208                     PHAGE_Faecal_FP_Brigit_NC_047909: hypothetical protein; NJAUSS_0635; phage(gi100017)     7.15e-97            StreptococcussuisSC070731MGFLRGGIMIISSEQVSVGHPDKICDQISDAIVTECLKYDKSSRVAVETLIKDNHVVVAGEISTRHYFNLENIVRQVIEPLGMKNVRVTNLLGLQSSDIAQGVDNGGAGDQGMMFGYATDETPEYLPLPYVLATRVLEKLMSLGHPLLGKDAKAQASYDYEKKRIDTFLVSIQHIETADLAKVKRIVTEAMMSVALRYHQNLDFNVLVNPTGRFVLGGSFADAGVTGRKIVADTYGGFAHHGGGAFSGKDPSKVDRSAAYMARKIAKDIVREGYAKRCEVQLAYAIGVAKPVSVYVETFGTSRYTTQQLEGMIRERYDLTPRGIIKELHLLNVDYTKTSCFGHFTKAYLPWEK
681309..681575                     PHAGE_Bacill_phi105_NC_048631: hypothetical protein; NJAUSS_0636; phage(gi100051)     6.85e-26            StreptococcussuisSC070731MDAKSTKAKGYNAQWNKARLRYLKVHPLCVQCKVKGRLTKAAVVDHITPHRGDQELFWNQSNWQALCKSCHDRKTKTTDRYVEYTYRF
681862..681873                     attR                                                                                 N/A                 AAAGGAAAACAA
682214..683560                     PHAGE_Faecal_FP_Epona_NC_047910: u-spanin; NJAUSS_0637; phage(gi100032)              3.97e-114           StreptococcussuisSC070731MAGHFYLMPIQIENIVAIRVTFNHAFIKEKSMTSQPTMEIKEIRLSELHPASYNPRKKLKKGDKEYEKIKQSLLKFGYVDPIIVNKDFTVIGGHQRLTVLKDLDYETAKCVIVDLSKEDEKALNIALNKITGQWDDQLLADLLLDLQESDFNLDLTGFEPPEIDDILSNVHDKDLSDDDFDVEEELKKPTVARRGDVWQLGKHRVICGDSTKAETYDQLLGDKKVNLVVTDPPYNCDVEKTAGKIQNDNMGDSEFYQFLLAMFTQVENHMEADASIYVFHADTEGLNFRKAFKDAGFYLSGCCIWKKNSLVLGRSPYQWRHEPVLYGWRQKGKHQWFSDRKQTTIWEYDRPKSSKDHPTMKPIQLMAYPIQNSSMRGTLVLDPFLGSGSTLIAADQTGRICYGIELDEKFVDVIVKRYMEATDNTDVTVVREGQSISYEEAVKQLGGM
683560..684150                     PHAGE_Acinet_WCHABP1_NC_041966: endolysin; NJAUSS_0638; phage(gi100033)              6.25e-19            StreptococcussuisSC070731MSNVHYSFIGSIGIGTLKDGTQFRFDRDRFSLIEDINFYRNKNNDEDAKSYIICAKGKYLHRYLFGHRHGYEIDHINLDTFDNRSENIRFCTHQQNQINQGLQSNNTSGVTGVSYYKPRQKYRARIKISQRDIHLGYYDTFLEATQARNVGIELLFGEYGRYNKVPEVPNWIRNKVEKICRNYKSFALTNYREETV
684147..685421                     PHAGE_Clostr_CDKM15_NC_048643: head morphogenesis protein; NJAUSS_0639; phage(gi100068)     1.26e-117           StreptococcussuisSC070731MTLSFLDFFAGVGGFRRGLELAGFKCIGYCEKDKFARKSYEAMYDTKGEWFHDDITSIDPTQLPKADLWTAGSPCQNVSIAGKRAGLYGERSGLFFTFVDLLQSQKEKDKPEWILLENVKGLLSSGGGRDYLDYLSILDEAGYDLEWQVFNSKDYGVPQNRERIYTLGHLRSRGRRKVLPISGESGSHLKQLVGGMQSYRVYDPSGIATTIVGEGGGLGAKTGLYLIDQSLTEPKLTDEARCITARYTAGATKRTAMNSGVLEIQPILTPNRIHKRQNGRRLKEQDEPMFTLTSQDRHGVLEGIKVRNGTKQGYQVAEVGDSVDLSYPNSPTRRARVGKGIAHNLSCGGQMGAVVWNDRVVKIRRLTPRECFRLQGFSDDLFEKAQAVNSDAQLYKQAGNGVTVTVVYAIGCAILASEELSKIS
685467..685748                     hypothetical protein; NJAUSS_0640                                                    N/A                 StreptococcussuisSC070731MYTTKEEENKSMTTTLEKLYDIYPATASIIPYKDWVIVASNGYKGTEVEIYETADSLEEFENFERRFDRIYQEAGTFEDFGHAVKWAFEKIGE
686405..686719                     PHAGE_Gordon_Kita_NC_031233: methyltransferase type 11; NJAUSS_0641; phage(gi100001)     4.13e-08            StreptococcussuisSC070731MGKILEQMGILTEMDMTAFAGYCQAYARWKEAEEFLSKHGSIIKTPNGYLQQVPQVSISQTNLKIMLKFCEQFGLTPSARNRLATMDSEVGTGDEMEDLLGGIL
686716..688308                     PHAGE_Strept_Rowa_NC_047906: hypothetical protein; NJAUSS_0642; phage(gi100002)      2.86e-99            StreptococcussuisSC070731MSYHYEPSPFMLPTSHYDKAKADRAVTFINNLSHTKGKWAGKRFDLLPWQEQIVRDLFGIVKEDGNRQFLTAYIEIPKKNGKSELAAAIALYLLYADNEASAEVYGAACDRNQASIVFDVAKQMVQMSRPLEKRSKIMGATKRIVNYTNAGFYQVLSAETGTKHGLNVSGLVFDEIHAQPNRHLYDVLTKGSGDAREQPLFFIITTAGTDRNSICYELHTKALDILNGRKKDTSFYPVVYGLSDEDDWNDEANWLKANPSLGHTIGIDRVREAYQQALDNPAEENVFKQLRLNMWTSSSVAWIPEHVYAKGNDPIQYESLKGRSCYAGLDLSSTSDITAFVLVFPPRFEEENYIVLPFFWLPEDTLELRCRRDHVLYDVWERQGYIKTTEGNVVHYGFIEKFIEDLSEIYHIKEIAYDRWNATQMVQNLEGMGLTMVPFGQGYKDMSPPSKELYKLMMEGKIQHGGHPVLKWMGQNVVMRQDPAGNIKPDKEKSVEKIDGIVALIMGLDRCIRHQTDEGSVYDERGILSF
688368..688670                     hypothetical protein; NJAUSS_0643                                                    N/A                 StreptococcussuisSC070731MGKTATLNVRVDSDDKLNAESVLKELGMPMSTLITLLLKQVSMTRSIPFDIALPQAPSSVDVSPLSAGELKDLLVQSYHSADHEETILAEDFFKGIKGVN
688685..689008                     hypothetical protein; NJAUSS_0644                                                    N/A                 StreptococcussuisSC070731MRLTKQASDDLTAIYRFIAIELQSPLTADKNIHLFEQSIKSLSTFPERCPILEGFESEGIVIRKLIVKNYVIFYRFVGEVVTVLRVLHGTSNIDALLRDIAEDNDVN
689145..689489                     PHAGE_Prochl_MED4_213_NC_020845: hypothetical protein; NJAUSS_0645; phage(gi472340277)     4.06e-08            StreptococcussuisSC070731MATKARIGLLTKNHTAQTIEVAYEGYPEYTGELLKKHFKSSKEIRALLQKGDIIQLEDSLDKIEHDDLQGNAQQHRFIGDISQLAEDTLADYIYLFQESDRTWYLLEEGEMKNI
689547..690830                     PHAGE_Burkho_phi6442_NC_009235: gp4, phage portal protein, HK97 family; NJAUSS_0646; phage(gi134288632)     1.68e-87            StreptococcussuisSC070731MGLLDLLGRKRARDKPRNSYEGQDFSYLFGRTTSGENVDEFKAMQTTAVYACVRILAEAVASLPIHVYERTATGKEKRVEHPLYFLLHDEPNPEMSSFVFRETLMTHLLIWGNAYVQIIRDRSGQVISLYPLLPDKMSVHRDESGKLYYKYKRQSEENPNFKEKGDAILKADDVLHVPGLGFDGLIGYSPIALAKNAIGMTLATENYGASFFKNGANPGGVLEHPGILKDPKRVRDSWNAVYNGVTNAHKVAVLEEGMKYTQVGIPPEEAQFLQTRKFQINEIARLYRIPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVVRLEQAFKRSLFLPEEKKTYFVKFNVDGLLRGDYQSRMNGYAIGRQNGWLSTNDIRELEDLNLLSDEEGGNLYLINGNMTKLKDAGGFMKQVPSEQETQSEEDMDA
690823..691518                     PHAGE_Clostr_phiCTC2B_NC_030951: holin; NJAUSS_0647; phage(gi100034)                 4.68e-38            StreptococcussuisSC070731MHKFWNFTEDDSGRTLRIEGQIADETWFGDEVTPQVFKNDLHAGNGDITLWINSPGGDVFAAAQIYNMLMDYKGDVHVVIDGLAASAASVIAMAGTTVSMSPVAMMMIHNPWTVAQGEAKDMQKVIEMLGEIKESIINAYELRTGLSRTKLSHLMDSESWFNAKKAVELGFADKILFDKQEEHGMDIESYSFSRTAAQQDLLVKMQAKLEVQQPKKTIPINQLEKRLNLLK
691537..692742                     PHAGE_Burkho_KS9_NC_013055: major capsid protein gp5; NJAUSS_0648; phage(gi255033737)     2.08e-40            StreptococcussuisSC070731MSTLLELKEKRNLAWQQAKTFLDSVRTEDGLVSEEDSKRYDDMEAKINLYNQEIARLERQEKIDLELAQPASQALIGQPTTVLNDRTTEEEKKGVASDSYAKIFWTSVRKRHFFDVKDVLRVGEDTEGGHLVPDEYEKKLVQGLQEENFFRSLATVIRTSSGERKIPVVTGHGSASWMDENGLYPETEETFGQVTLDSHKIGTAIRISEELLNDSVFDLESYMTAEFARRIGTEEEKAFLIGDGSKKPTGIFTQAEVTGPTTATKDITFDDMIELYHSLPAPYRKNAVWILHDTTVKAIRKLKDNNGNYIWQPSTQAGQPDLILNRPYYTSTFAPLPEAGNKAIAFGDFSYYWIADRQGRTFKRLNELYANNGQIGFLASQRVDGKLVLPEAVKTLTVKAK
692742..693002                     hypothetical protein; NJAUSS_0649                                                    N/A                 StreptococcussuisSC070731MMVSLVEAKQYLKVEHDDEDGLIEQLLETSQQLCEDILRQSIYSEVLKTAILYGVAYLYEHREDANHRELKETLYHLLLAERKDVF
693333..693701                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; NJAUSS_0650; phage(gi100011)     2.12e-18            StreptococcussuisSC070731MTKIGLDALEIAIANELAEFVEDTTEVMREVVEEVTEESIETLKATSPRKSGSYAKGWKSKATIDTSTGLTKTIHNRTPGLTHLLENGHAKSSGGRVEGIKHIAPVEKQAIQSLEEKLRKRV
693723..694034                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; NJAUSS_0651; phage(gi100010)     1.84e-11            StreptococcussuisSC070731MYSILKELQLPVAYHHFDEGSRPRPPYLVYLETDSDNHGADNWTYHKQNNLQVELYTTKKDLATEQKVESLFDSHLIYFEKVETYISSEKLYQITYYITLHGG
694036..694605                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; NJAUSS_0652; phage(gi100009)     5.06e-67            StreptococcussuisSC070731MAEKNKVTFGLQDVHWAEVTSEGSDGTLTYGNVERLRGAAELTLEPTGDKGSYKADNINFYTTESNDGYEGTLKVALLTQEFLTRVLGEQLDATTNTISEIANSEKKNFALMFRFEGDKKETLHVLYYCYASRPTVGSKTKSGSDINEVELTFTASPRPLDKVVRRRTTEETSDEIRQNWFKAVFEPRK
694616..695035                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; NJAUSS_0653; phage(gi100008)     6.81e-60            StreptococcussuisSC070731MRESITIAGTTYELATNAYTPIAYKEQFGKDYFQDLFSMVNSQAILDKLGQLEEGEDLQAHHIDVSILSDFDMTFFHRIFWVFAKSANPRVKPFVDFYMEMEEFPVQDIAPVLMNMLNQGMSTRKKQMKQKQRVRKSSQ
695218..698076                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; NJAUSS_0654; phage(gi100007)     0.0                 StreptococcussuisSC070731MAGNIKGITIEIGGDTQPLQDALKGVNKQASEATKELRQIDKALRFDTGNVTLLTQKQEVLAKQVETTKEKLATLRQAQSQVEAQFKAGDIGADQYRAFQREVETTQRLLTSYETKLADVSSTLENHGRASSLAAQQLDKLQVEQGQLASEMNKVTSQFELQESALSSNSSEAERNAIAQQKIGAQSEIVSKQISNLEKQLALTKRKYGENSIEANKMETELNQAKTALNNLNNEMDQTKSSADGAQDGMKAMSDTIRAEALQATSEKLADISQKIFEVGTESMSAAAQLQASNAQFSTVFGDMENAAKDALNKIGEEMDIVPERLQGSFTQMASFAKTSGMDTAQALDLTTRATRAAADGAAFYDKSIEEVTENLQSFLKGNYENDAALGISATETTRNAAANKLYGKSFNELSEAQKQLTLLQMVEDGNELSGAMGQAARESDGLENVLGNLRQSGTNALAAIGQPILEMLIPVFQSLADIVSQLATWFTNLSSPIKEVVIIFTGILAVVGMLLPVFLGLQVAAAAMGTTVVGMITAFLPIVGIIVGIVAAITLLIVGLKELWTNHEGFRTAVTEIWNSIYAFLSMIIQQISSFVMSIWGTLTTWWTENQQLILNAATTVWNAITTVIQTVMTILGPLIQASWENIKLIITTAWEMIKIVVETAINVVLGIIKAVMQVITGDWTGAWETIKQVLSMVWEGIKSLISLALNFIAQYISTAWTGIKNTISNVLSAISSVISTIWSAIQSTISSVLSAIGSTVSTIWNGISSTVSNILNGISNTVSSVWNGVKNTISNAINGARDAVSNAINAIKNLFNFQIRWPHIPLPHFRVSGSANPLDWLKGGIPRISIDWYAKGGILTKPTAFGVNGNSLMVGGEAGKEAVLPLNEQTLGAIGRGIAKTMTSNLPTIHITITGNTVREETDLHRLAEMVGEKLVYELERQQGLRGVKP
698073..698795                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; NJAUSS_0655; phage(gi100006)     1.66e-103           StreptococcussuisSC070731MIRHNALTIGGVSTASFPFKVIVEDSPSITVSESKTHLIEHQGLSGAVLQTNPRRSVMELSYTLYLVKPSEEQLFSFLKLFLKEGFWLENASFKTIRFWCYKVHHTPVQKDKLGVYELKVTFSCHPTKWFKTTTSQVFRTSGTLRSQGSAIAFPKITISGNSTSETSFTIGDDVIRLERLQETLIMDNNPSQPSFKTQRGQPVKWSGDFISIDAGRNDSVGVVLGTGITSLTIETNWGWA
698797..703344                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; NJAUSS_0656; phage(gi100005)     4.39e-124           StreptococcussuisSC070731MLSLLDKNIRTAKWHGKPLPETIKASVKENLNGDFVLNFTYPITDSGLFRELKEDYLVRSPVPVLGHQLFRIKKVIEGDTSLEVVAYHISDDIMTRLVSPFRCEQVPCATALSSMVMASKSPLGDFSFTSDIVKNRIYTTDKEQTLYSSLLDGKHSILGTWEGELVRDNLALTITSERGQDRGVVISTHYNLKKYQRTKESSQIITRIHASSSFKQEGQDRETVLQVTVDSPLINSYPFINEVTYTNNHLRTRQELIEWASSKFRIEGIDKPKDAIIIEAFELDGQTVHLGDTVTLKSKLHGIDVRKKAIAYDYDPLAKNYRSITFDDKASIGTSKTGDSLTTLANNLIDGNKRSEDVAVEIALENANRAFDAEFEKRQVAIDNAILQAQSRGEVYADRLKASIDSELSTIHQQMRQQEEEQQRTTRNLMAKAGVNTNLATEAKQKAEQAQTGATEALRRAEQAKLDAIQEANRLTSTERSQTESKIATAKSQAITEASRLVDVAKALLGGQLATVSTNLSQTKEDIKLLASKQLVDSLTGRVTGAESMIQVQADQISQRVKTSDFNQAKQRIETAESSITQLGNRITTEISQVDAKIPTSLDGLNLMTGTRDWSNKGNAWHLGNNWSTETENFRGLVVRSTQAGYNGSHQNIVVKAGDVITFSFYAKANQSLSSIKVSSVWTGSSVYRAPVARVRESDDIISVTSDWKRYWKTVHVLSDGSLQFRTEYNGSTIPNGNKFYVAGLKVAKTSLDTGYSENPADISGELTTQRTLITQTASGVEQVSTRLTEANGKISSSDTQIRQLVSDVSSKVSQTDFNNLKRTVEGHTTSIQQTQQSILLKADKNILEGVKTTADNALAKANTNASQITQTKADLRIANDAISQKVARTDFNSLTGRVANAETTIRTQAGQIEQRLTSTQVESAINSKGYQTKSQVDSNITGRGYLTSSSLQPYATTTSVQNLVKTTSDSFTQRISQTESRIPTSVSHRNLIAGTSDRWSAYQTINASSNWIASLGRVQFGDSSGIYVGSKVHLYVHISADEITFDPAVTTRTMKLQGPILDSQNVWTWTNWNLYHPFYNKWSSNLTTGNNYRLIKLTSTITQEMYQQSKGFELQVRIDGVKTGKFHVRALMVSTGDIFPDYWTPSLDDFTTMSVFHEVRDTVSSHTRTIGDHTNQISQVVQTANGIVTRVGNLETSRATTATVNAIQTQVSTLAGAWSVRNLTSAGTVLSQLNLNKDGTVKIDGKLVQITGTTYIQEGVIASGKIASLDAGKITTGIISAARIGAEAITADKLKVDQAFFTKFMATEAYLKQLFAKSAFITQVQSVTLSANKISGGILSAINGAMKINLSLGNIKFFTNSPSISREVSGYPHQWVSFETGTSNGKPCGVTIIGSNRWNNWNANDGGFVGIRAWNGTDTDQIDVVGDKVRLASAPYTNPDGWEIVTLPNRLSIDAYKASDRPSSILNIGDIRIYRNSTSYVSLKDVLHQFNHNFKHLVNITGRGDVILTWDTIK
703357..703563                     PHAGE_Strept_phiARI0131_1_NC_031901: hypothetical protein; NJAUSS_0657; phage(gi100009)     1.24e-10            StreptococcussuisSC070731MNLEQINQSLKLTIQELVTKLSDEITAKNLIAIQLVERDEELSQLRKEKQELTELLEVQTKPEEGKGE
703569..703937                     PHAGE_Strept_phiARI0462_NC_031942: hypothetical protein; NJAUSS_0658; phage(gi100004)     1.02e-41            StreptococcussuisSC070731MALLNIDKVTEPFDLETALAYMRKNGEFIRCRTAEQDFYMYLEEVRRPAIKNGKRQLITTETVWAFNQWGSTTLTLNLSDLFHDCFYLMRFDENGQPDWSDPTIVQEGSVESEVTDEGIVNT
703915..704310                     PHAGE_Paenib_PG1_NC_021558: holin; NJAUSS_0659; phage(gi514231208)                   3.50e-23            StreptococcussuisSC070731MKELLTLNKILFSMIGGLIGSLFGELDGILYALLVFIIIDYLTGIFAAVVEKQLSSSIGFRGIFKKIAILFLVSLGHLIDTAIIKQGGTIRTMVIFFYLSNEGLSILENTVRIGLPIPEKLQAILKQINER
704317..705786                     PHAGE_Strept_Str_PAP_1_NC_028666: endolysin; NJAUSS_0660; phage(gi966198635)         1.40e-48            StreptococcussuisSC070731MGKHLVICGHGQGRTGYDPGAVNAKLGITEAGKVRELAKLMAKYSGQQIDFITEQNVYDYRSITSIGKGYDSITELHFNAFNGSAKGTEVLIQSSLEADKEDMAILSLLSRYFQYRGIKKVDWLYNANQAASRGYTYRLVEIAFIDNEQDMAIFENKKEDIARGLVSAITGVEVKTIVPSPPSSTVGSSGTPSKPIYLVGDSLRVLPHATHYQTGQKIANWVKGRTYKIIQVKNVHQSNSKRAYLLDGIKSWVLEQDVEGTTKGHSEQTYQAQKGDTYYGIARKFGLSVDALLALNGLKKTDILRVGQTLKVNAASRTTTAIPTSVASRVVASALSKVGQKVTVPSNPYGGQCVALVDKIVQELTDKNMSYTNAIDCLKKAKSNGFQVIYDAWGVNPKAGDFYVIQTDGLVYGHIGVCVTDSDGKSIDGVEQNIDGYSDHNKNGINDQLEIGGGGITRRVKRQWMADGSLYDSTRTVKLGKVVGWFRIS
706008..707249                     PHAGE_Faecal_FP_Brigit_NC_047909: methyltransferase type 11; NJAUSS_0661; phage(gi100001)     6.45e-32            StreptococcussuisSC070731MSVKKIRVNKQKNKQRICAYIRVSTTNGSQLESLENQKQYFINLYSNRDDIDFVGVYHDRGISGSKDNRPNFQAMIENCRKGMIDVIHTKSIARFARNTVTVLEISRELKAIGVDIFFEEQNIHTLSSEGEVMLSVLASIAEDELRSMSGNQRWAFQKKFQRGELVINTKRFLGYDLDENGELIINPEEALIVRQIFALYLEGYGTHRIAKLLNEKGVATVTGAKWHDTTIRQMLSNEKYNGSVLLQKYFHDGVNGPKKLNQGELEQYFIEDNHEAIISMEDWQTVQAKLNRRRWQQGRNKTYKFTGLLKCQHCGSTLKRQVSYKKKIVWCCSKYIKEGKAACQGMRVPEVDISNWTVTSPVKVIERDRDGEKYYSYSSQESADQYSSSGQEENQSSRILSSVHRPRRTAIKL
707212..708504                     PHAGE_Bacill_Gamma_NC_007458: site-specific recombinase; NJAUSS_0662; phage(gi77020163)     4.82e-30            StreptococcussuisSC070731MSTDQEEQLSSYENQVNYYREFISKHEDYELVDIYADEGISATNTKKRDAFNRLIQDCRAGKVDRILVKSISRFARNTLDCIKYVRELKELGVGVSFEKENIDSLDSKGEVLLTILSSLAQDESRSISENATWGIRKKFERGEVRVNTTKFMGYDKDDNGRLIINPQQAETVKFIYEKFLDGYSPESIAKYLNDNEIPGWTGKANWYPSAIQKMLQNEKYKGDALLQKTITVDFLTKKRVQNDGQVNQYYVENSHEAIIDKDTWELVQLELERRKAYREEHQLKSYIMQNDDNPFTTKVFCAECGSAFGRKNWATSRGKRKVWQCNNRYRVKGQIGCQNNHIDEETLEKAVVIAVELLSENVDLLHGKWNKILEENRPLEKHYCTKLAEMINKTSWEFDSYEMCQVLDSITISEDGQISVKFLEGTEVDL
711855..711866                     attR                                                                                 N/A                 ATCTCAAAGGAA

#### region 2 ####
1477899..1477910                   attL                                                                                 N/A                 AAAAAGGAGAAT
complement(1479200..1479853)       PHAGE_Strept_VWB_NC_005345: hypothetical protein; NJAUSS_1387; phage(gi41057269)     3.65e-10            StreptococcussuisSC070731MESGMIEWIFFDLGSTLLDEEAAYGYYIDKCVKKLESLDIEVSSDSYKKKMVEYAHKSLDPIRSTWHYFAPTEPRPLWTNEGVSLYPETIDALEKLSQNYRLGIIANQSSSIRELLKEWGIESYFQLIILSEEVGLSKPNTAIFTLALQKTNIPADRVVYVGDRFDNDILPAKSLGMWTVRILTGFGKHASENEKLKSDWIIPSLQEITNIFEQTKN
complement(1480008..1480268)       PHAGE_Gordon_CaptainKirk2_NC_031072: hypothetical protein; NJAUSS_1388; phage(gi100036)     7.50e-12            StreptococcussuisSC070731MYHLEYSKKAQKQIMKLDRQIQRLLFAWIDKHLEGTDNPRANGKGLTGNHANEWRYRIGDYRLICDIQDDKLVILALEFGHRKDVY
complement(1480270..1480500)       hypothetical protein; NJAUSS_1389                                                    N/A                 StreptococcussuisSC070731MNIMSTVTIRLNQEEEVFFKSYAQLTGQSLSSLFKKALERDIEDEYDLKIYHQAYDEYKADPETISHADFKKELGL
complement(1480801..1482108)       PHAGE_Strept_20617_NC_023503: enolase; NJAUSS_1390; phage(gi588295080)               0.0                 StreptococcussuisSC070731MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNVIADAIIGFDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEVPLYTYLGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPSFKEGLRWGAEVFHALKKILKARGLVTAVGDEGGFAPKFEGTEDGVETIIEAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKRVQLVGDDFFVTNTDYLARGIKEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAVYKGLNSFYNLKK
1482336..1482710                   PHAGE_Strept_20617_NC_023503: hypothetical protein; NJAUSS_1391; phage(gi588295079)     3.02e-21            StreptococcussuisSC070731MGTYRERVVLIVSFDDLSSEVVGNKFDTICQKLANRYSPLFLKLSPALSDKQQISLLKIAQTFGITTAIIDEKIGQSPYALVFHTNHAVDNEEVSLESIFPNLISKPEEKKEDAKPSFWKKLFG
complement(1482937..1484064)       PHAGE_Strept_20617_NC_023503: glycerate kinase; NJAUSS_1392; phage(gi588295078)      6.98e-99            StreptococcussuisSC070731MHILIAPDSFKESLSATKVAEAIKKGFSKVYPQAGYDLIPLGDGGEGTVESLMQALSLDGTQTWVTGPFGDKIKVSYAVKDDLAVFEMAEIVGLASIPHERRSPLFIKTQGVGELIVELVQNGVKRIFIGVGGSASHDGGIGMAAGLGVKFYNREGKEVEAIGAHIGEIVSFSTEDMLVDLSQVRIDLVTDVENPLCGPAGATFVFAGQKGLTSAEFELVDKKMESFYKLVNPMLLDLAGAGAGGGMAAGLVQFAGARIRKGIDFVLDQLDFDHRVTKAGLVVVGEGRMDAQSLSGKTPIGVARRTPTGIPIIAICGSLKDDLPEFPFENICAAFPIIASVESLEDTLQKAEKNLVRTAEQVARILQLGGQQRWN
1484172..1484822                   phosphatase; NJAUSS_1393                                                             N/A                 StreptococcussuisSC070731MYQTILFDLDGTLTDSGQGILNSVAYALEKMGIEEPDTANLNRFIGPPLYESFSRFYQLSPEDTQSAVDAFRVYFKEKGMFENQLYPGIIPLLEELRTAGKTLVIATSKPEIFAKQILEHFGISHYFDVIAGASLDSSRISKADVICYAINQLEAFPNHAVMIGDREHDIEGARMHQLPAIGVLYGYGNKQEFEKAGATMIVETVQDLKRVLLTTE
complement(1485259..1486602)       PHAGE_Bacill_vB_BceS_MY192_NC_048633: minor tail protein; NJAUSS_1394; phage(gi100055)     1.25e-35            StreptococcussuisSC070731MTLDVATKTGKTPVLERMLSKYVGRQTSSIENDITKTRNHSRQRGNIMRVVFGIDVSKASSEVAILVNGEKVHNYTMSNDAIGFSRLLGDLKTVHKPEIIFEATGVYSRRLQAFLDEHGYAYTRLNPLEAKKQLDSLRVRKTNQIDAEKLAQSQFVLNRKPTYVQEEVYQNLRDLSRFYQNLTEDIVRAKNRLHKVLQVTFPELENILSTPTGEQYWNLVITFPCKDFVLDLSKNELSKSIRQSTSKRISDKRVAYLAEKLTALANQSYCAVKKTSPILEEVHYYAKELLRLSEQRQAVLDQMVELAQPLPEYDILLSIPGIAETTATSIIGELGDIRRFQSANQINAFIGIDLRHYESGNFLAKEHITKRGNPYARKILFKCIHNIASVSHTNPCHIADFYEKRKRQSQTTSTKPHTIASIHRLIRTMYYLIMHNKLYDYASTQNR
complement(1486735..1487409)       phosphoserine phosphatase; NJAUSS_1395                                               N/A                 StreptococcussuisSC070731MAFYFYTLKGILEMTTGLLVMDVDSTLILEEGIDLLGEEAGLGAQVAAITERAMRGELDFEEALRERVALLKGLPVSVFDRIIKKIHFTPGAAELVSELKMRGYKVAVVSGGFHETVDRLAAQLELDYVRANRLEVVDGVLTGQVLGEIVTKDTKKACLEEWAAENGLSLSQTIAMGDGANDLPMIQRAGIGVAFCAKPIVQEQVPYQINEKNLYKLIEILDSK
complement(1487422..1489146)       septation ring formation regulator EzrA; NJAUSS_1396                                 N/A                 StreptococcussuisSC070731MPTGTIILIVSIVIILIIAYVACLIVRKRNDNLLVALEERKEELFNLPVNEEVETVKALHLIGQSQVSFREWNQKWVDLSLNSFADIENHIFEAEGYNNAFRFVSAKNAIDSIDSQIDLIEEDIASIRQGLMELKEQEEKNSGRVKHALNLFDSLQEAVRENPDSYGETLSELEKQLKNIEVEFSEFVMLNSSGDPIEASEILDKTEEHMIALNQIMDRIPSLIERVTKDFPEQLEDLESGYRKLVEQNYLFTEANIESQFQNIRVSIRENTALIVSFDLDAAEAENEGIQAKIDHLYKVFNREIEANKEAVKISKNLPKFLEHVVQNTQLLDEESQRLNATYLLADSKLSRINQLKARLESIEIVVTESVEDIENPQVAYSILEERLDHSLASLKEIEEEQLVLADYLKSQELSENTARKKATLYINKLHTLKRYMEKRNLPGIPAEFLTNFFRTSDHVEALIAELDYKRINIEVVNRLLENATYDMNQLEELAYLIVQNATLTEQLLQYSNRYRSFDESVQKAFNRSLSIFEKDFDYQAAFEEISFALETVEPGVTERFVRSYEKTREAIRY
complement(1489235..1491187)       PHAGE_Bacill_G_NC_023719: gp252; NJAUSS_1397; phage(gi593777708)                     4.76e-177           StreptococcussuisSC070731MTEEIKDLQEKAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFADKIEVYIEPDNSITVIDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTQLDVHVYKNGQVYFQEYKRGEVVADLEVVGETDRSGTTVHFTPDPEIFTETTEFDFAKLNKRIQELAFLNRGLNLSITDKREGVEQTKEYHYEGGIASYVEYLNENKDVIFETPIYTEGEMDDITVEVAMQYTTSYHENVVSFANNIHTHEGGTHEQGFRTALTRVINDYAKKNKILKENEDNLTGEDVREGLTAVISVKHPGPQFEGQTKTKLGNSEVVKITNRLFSDAFAEFLLENPQIARRIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNDAAKTELFIVEGDSAGGSAKSGRDREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGFGADFDVSKARYQKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGIKVGSEIKEYIQPGVNQEQELQDALERHSTGRSKPTIQRYKGLGEMDDHQLWETTMNPENRLMARVSVDDAAEADKIFDMLMGDKVEPRREFIEENAVYSTLDV
complement(1491369..1491908)       intracellular protease/amidase; NJAUSS_1398                                          N/A                 StreptococcussuisSC070731MTRVAVVLADGFEEIEALASVDVFRRAHFDCQIVGLDSHEVEGSHGIRVQTDQVFDGDLSSFDLIVLPGGMPGSVHLRDSESLITELQRAVASGKSVAAICAAPIVLDKAGLLDSRHYTCFPGKEKDIPSGIHLEEDVVVDGPIITSRGAGTSLDFAYKLVDLFGGDGESLAQTMVYHS
complement(1491922..1493151)       rod shape determining protein; NJAUSS_1399                                           N/A                 StreptococcussuisSC070731MRKLMKNRGTIDSRVDYSLILPVFFLLVVGIISLYIAVSQDYPDNVVQMVGQQIAWIGIGTVAAFLVMFFSTKFLWQITPYLYVLGLGLMVLPLFFYSPDLVASTGAKNWVTIGGMTLFQPSEFMKIAYIIMLSRVIVTFHKYYPNRKIREDFMLIGYMTLFTIPVLILLALQKDLGTSLVFVAIFSGMLLLSGVSWKILLPTALTGIVLVGGFMLIFISPGGTTFLHNLGMDTYKINRIAAWLDPFKNAQSTTYQQAQSLIAIGSGGLKGLGFNKTNLLIPVRESDMIFTVIGEDFGFIGGTVLIGLYLLLIYRMLRVTLKSNNRYYTYISTGYIMMLLFHVFENVGAATGLLPLTGIPLPFISQGGSSMVSNLIGVGLVLSMGYQSRLADEKETNRSRRYRKITIKR
complement(1494615..1495157)       PHAGE_Strept_SpSL1_NC_027396: site-specific recombinase; NJAUSS_1400; phage(gi849256088)     1.28e-104           StreptococcussuisSC070731MNAVEPIRDKDDIQAMKDYLRSWNERNYILFLVGINTGFRIGDILKLRVKDVQGWHIRVREQKTGKQKTIKMTRTLKNELRKYVEGKPLHHYLFQSRNGVNKPLDRRTVYWILKTAGNDLGIENIGTHTMRKTFGYHYYKKYKNVADLMSIFNHSSPAITLIYIGVRQDDLDTKMANFDI
complement(1495627..1497159)       PHAGE_Lactoc_98201_NC_031064: hypothetical protein; NJAUSS_1401; phage(gi100015)     9.25e-99            StreptococcussuisSC070731MGSITQYGRQITGETQYNARDIRLRTFKGWQGKVFQFVQHKQEERYRKLLEDGLDDKQAQAEIKKPVPPLIVAQYMAELLTVCRIESDEGTKPVYFYNPDEGIYINDREFLKDFISIIEPRHNEKRASDCIYHLTRKAPHRQAENAPHLIIVGNGIYNRKTRTLEPFTDTRVFTHKIQTNYNPHAQSPTIKGWEFNGWLLDLFNGDKELYQLSLQLLNAVVRGESYAKMFWFVGEGGTGKGTLQELFINLIGRQNIASIKITDLDVNNRFTLAQAIGKQAIIGDDVQAGAVIRDTSKLFSLVGGDTVTVEKKGKDAYSTFIKTVVIQSTNTLPKIRGDYHAIRRRMVILPFNKHFKGKPNRAIKNDYITRPSVLEYVLKTVIDLDFKDFIEPSKSIDLLDEYQETIDPVLAFSQNLFTNLHSTFIPNDWVWWYFTGFADYHNFQHNFSSQGFHTHFPQYLPDNWEKLAYPISLPRGADLPKGFYPKDDQPHYLPLYVPIKGKAQRGYKKK
complement(1497174..1497746)       hypothetical protein; NJAUSS_1402                                                    N/A                 StreptococcussuisSC070731MYSIVEVTIKRGEQILLDLLKDNPTRAVMQDNFFRFFYYLPFGGYITPFSLNNITLKVFEKVPAPKGWELIRDYPISIMKTSLLAKLEDIEKYMLDQQRQASGLYLDGWVFDTIANGIYTQEETAIFIRQMYLHGYDFEQVVSLFTAIVKRSSLASYFLDVMKRFYFAEATGNTIAYIINQQKQDTKIIS
1497905..1497917                   attL                                                                                 N/A                 TTTCTAACGGTTT
complement(1498175..1498474)       PHAGE_Strept_M102AD_NC_028984: hypothetical protein; NJAUSS_1403; phage(gi971763197)     1.07e-07            StreptococcussuisSC070731MDLKGNDKHIYSLIGVGIEKAITARHIAQQTNLDKRTVRECVRRLIIKHKIPIIGNRKGNHKGYFIPANHSELMAGIGALEKQIEEEKKRLEVLLEAEV
complement(1498846..1499109)       hypothetical protein; NJAUSS_1404                                                    N/A                 StreptococcussuisSC070731MAEALLSESASLELVRGALVLAREMAKDEIERLNKKPLRQGEVMELYGFDHKYMKYLKSCGLRSRRQGKSIYYDVRDVEEILEKLKE
complement(1499240..1499674)       unknown phage protein; NJAUSS_1405                                                   N/A                 StreptococcussuisSC070731MGRILEGVEMTKTPFTQELLLQVYEDNGLVSFDLLQERLKGWTIEGIKARFNQWRHRGIISYSLLNDEIDEFQFLKTKREEKQEITEGRKLKLDEYFKQVLATADIINKPTASDTNRLKAIQLQQQALTEIPDDIYKEFYEVYA
complement(1499659..1499907)       hypothetical protein; NJAUSS_1406                                                    N/A                 StreptococcussuisSC070731MKHISKSLQNFTKELEKTLEPNNVAYLTLAWAKINEESERAIEILEPKTSKEDFKAVMEELETLKNTQYTTEDIVLMTWEGF
complement(1499963..1500184)       hypothetical protein; NJAUSS_1407                                                    N/A                 StreptococcussuisSC070731MSKKQTYKEFKKWVDDQVNMAEAMGLDENAEVLHDMVEQNAQAWVQIQEMLEEHTLHYRAKGKKKRGKQHGDK
complement(1500181..1500417)       hypothetical protein; NJAUSS_1408                                                    N/A                 StreptococcussuisSC070731MIDKNTVLFTYGEDNEHKQTVGTFLELVKNEDGEKLYSIGETLESEGKSLGKELNEIAGTFETLIDSLLTTLEGENTK
complement(1500610..1500900)       hypothetical protein; NJAUSS_1409                                                    N/A                 StreptococcussuisSC070731MTTLEERYCIERRAFLGQRATRLELLERVIRLELMLMDIADSTLDTDFPEMAVNTTLDHIADFGDEALYLLESLDHDGDYKALWEHTKDTGADNGK
complement(1501218..1501352)       transcriptional regulator; NJAUSS_1410                                               N/A                 StreptococcussuisSC070731MLTKKATAEKLGIKPQTLTKVEQGNYDAPRRIYESVINWLLEDV
1501558..1502079                   PHAGE_Strept_20617_NC_023503: phage DNA-binding protein; NJAUSS_1411; phage(gi588295107)     5.40e-17            StreptococcussuisSC070731MNKLKTLRKENNLTQEELAKKIGVNLRTLQKWENGESSIRTKNAEKLAKHFGVSVGYLLGYEDKVKKEFYKQLDLYNLDEFRKFRIKLNIELSLLNGILDNDYEKISDKVSYLNNFADKELKRGMENECLEPQELQELFELRNVASYFTSLVETLEQLQYNLKKLLEDTGKDT
1502135..1502827                   PHAGE_Lister_LP_030_3_NC_024384: DUF3800 domain-containing protein; NJAUSS_1412; phage(gi658607685)     2.35e-40            StreptococcussuisSC070731MQHYSLDESGSITTNNAPNNRFFIIAGVTATNKDKVKRVFRKAKVNYLKHNPDVLLDIKSEIKGSQMSIEFKDYVFSQLISKTDIQFNYLVFDNYNALPRLREKPNITFNYLMFLKADKLLNNQTPLKLDLDDRNKSVESLKALEEYLQTKLCVESDRVSDVKVEFFNSANHTMIQIADIFANHLYRIFKQVAKNQDYTENMELLAKLKQTNLQHCQYFPAGKCECADLF
1503514..1504656                   PROPHAGE_Oceano_HTE831: integrase; NJAUSS_1413; phage(gi23097608)                    1.37e-83            StreptococcussuisSC070731MINQYQLKDGSIRYSYIAYVGIDPLTGKEKRVRKRGFKTKKEAKIAESQLLLKVEQDGFFDKPDRITFEEVYKIWLEHYKNTVKASTYARQKAQADLHIVPVFGACYVDKISLPMCQKQAQEWFKGYKKYANFIGMTKMVLDFAVNLGYIHDNPMKKIIKPRKSSEVDEEEKKKENFYSREDLQKFLDCVAKEDKEEIACIFRLLAFTGMRKSEVLALRWKDLDLFTSRLSVSQIVAYGENNSIVYQTPKTKKSKRTITLDPITVSILKKWEKTRQFLNFPQRVKPTDLVFPAETGNAHSFDYINYNLRCILKKYDLPYITPHGFRHTHCSLLFEAGASIKEVQERLGHEDIKTTMNIYAHVTENTKEKTAEKFAQFLGM
1504735..1504747                   attR                                                                                 N/A                 TTTCTAACGGTTT
1507761..1507772                   attR                                                                                 N/A                 AAAAAGGAGAAT

#### region 3 ####
1599194..1600360                   PROPHAGE_Escher_CFT073: transposase; NJAUSS_1520; phage(gi26248352)                  5.62e-10            StreptococcussuisSC070731MEVLYQSCAGIDVHQANIVVCILHGPLTSTRPKREMATFDTTTKGLRACHDFLSQFHVEAVGMESTGVYWRPVWHALCDDFELILAQPAHMKAIPGQKTDKKDAHWIAKLTRIGLLPRSFVPDETIQELRELTRQRKHYVESRNRETNRIHKILQSGGIKLTTYIEDIMGLSGRNLLQLLVDGTPITPRIVHQSVYTSLKKKVPQLLEALDDYFSDHHRFMLKQSLEIYDFYQKQIELLEERMNVYLSQYEKHVEILDSIPGIDVITASVIISEVGVDMSQFPTFGHLASWAGLCPGNNESAGKKRSTKIRHGNSYLKKCLCQAAFAVKRQKGSPLAERYYQIQSRRGSQKATIALAHQLLKIAYILLKEQMTYPEFLAQKKRLLGTS
complement(1600595..1601062)       PHAGE_Erwini_PhiEaH1_NC_023610: hypothetical protein; NJAUSS_1521; phage(gi589287686)     1.93e-09            StreptococcussuisSC070731MTIRKARQSDIPILNELLQDILQVHHQARPDIFKSAGQKFSEAELVALLENPDKPIFVFELEGQVVGHLFCELSTATGDVLEPIKTLFIDDLCVANSARGQRIGEQLYEFALSYAKEQGCHNLTLDVWADNAGAVRFYERQGMKPQKFRMEQIIE
1601457..1602800                   PHAGE_Bacill_vB_BceS_MY192_NC_048633: minor tail protein; NJAUSS_1522; phage(gi100055)     2.87e-34            StreptococcussuisSC070731MTLDVATKTGKTPVLERMLSKYVGRQTSSIENDIAKTRNHSRQRGNIMRVVFGIDVSKASSEVAILVNGEKVHGYTISNDAIGFARLLGDLRTVHKPEIIFEATGVYSRRLQTFLDDNGYAYTRLNPLETKKQLDSLRVRKTDQIDAEKLAQSQFVLNRKPTYVQEEVYQNLRDLSRFYQNLTEDIVRAKNRLHRVLQVTFPELENILSTPSGEQYWNLVIAFPCKDCVLELSNDELSKSIRLSTSKRISDKRVAYLAEKLIALANQSYCAVKKTSPILEEVRYYTKELLRLSEQRQAVLDEMVELAQPLPEYDILLSIPGIAETTATSIIGELGDIRRFQSANQINAFIGIDLRHYESGNFLAKEHITKRGNPYARKILFKCIHNIASASHTNPCHIADFYEKRKRQSQTTSTKPHTIASIHRLIRTMYYLIMHNKLYDYASTQNR
complement(1603087..1603362)       PHAGE_Burkho_BcepMu_NC_005882: gp04; NJAUSS_1523; phage(gi48696914)                  4.05e-27            StreptococcussuisSC070731MANKQDLIAKVAEATSLTKKDSAAAVDAVFGAVADYLAAGEKVQLIGFGNFEVRERSARTGRNPQTGAEIKIAASKVPAFKAGKALKDAVK
complement(1603452..1604048)       Uncharacterized protein; NJAUSS_1524                                                 N/A                 StreptococcussuisSC070731MRPRKAGNLNIWKWLFLAQLSLLIGCGIVLYTRIQTDREDLTKLVQTSTEDTKVGTFSTNREQLNQTLTNYLKEYQTEEFSYQLFVTSQQVVFEGSYQIFGVTIPLYIYFQPSKMEDGSILLRITEISVGSLSLPKAEVLAYLQKNYKLPAFVKIDSEQAQVQVQLTELKNKFGLYGKANTIDLYNDQFIVDIYRKRQ
complement(1604020..1604703)       lysophospholipase L1-related esterase; NJAUSS_1525                                   N/A                 StreptococcussuisSC070731MALGDSLTEGVGDTTGQGGFVPLLAQSLTNDYGYEVDYKNFGVSGNTSNQILKRMKEDGELISYLKTADLLTLTVGGNDLRKAIIKNIANLKVSTFDKPAKDYGKQLDTIIKTARKNNPNLPIYVVGIYNPLYLNFPELTEMQTIVDNWNTMTEQITEKYQHVYFVPINDLLYKGLEGEAGISQNGSQVTNNLLYEEDSFHPNNTGYEIMKKAILERMNETTESWEP
complement(1604846..1605679)       PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; NJAUSS_1526; phage(gi985761237)     1.72e-20            StreptococcussuisSC070731MSKIKIVTDSSTTIEPSLVEELNITVVPLSVMVDGVVYSDNDLKEGEFLELMRGSKNLPKTSQPPVGLFAETFAELAKDGSQIIAILLSHALSGTVEAARQGATLSGADVTILDSSFTDQAEKFQVVEAARMAQAGASKEEILAAIETVKEKTELYIGVSTLENLVKGGRIGRVQGMLSSLLNIRVIMEMKDHQLTPIVKGRGNKTFKKWLEEFTATLADKKVAEIGISYSGTADFANEMKSQLQEYVSKEISVLETGSIIQTHTGEDAWAILLRYE
complement(1605773..1607443)       PHAGE_Escher_500465_1_NC_049342: putative single-stranded DNA binding protein; NJAUSS_1527; phage(gi100050)     6.40e-104           StreptococcussuisSC070731MVAMLLEVSIKNFAIIEQVSLNFENGMTILSGETGAGKSIIIDAMNLMLGARATTDVIRHGAAKAEIEGLFSFENSRALEQILLEQGIEVADELIIRREILQNGRSVSRVNGQMVNLSVLKQIGQYLVDIHGQHDQEELMKSQHHIRLLDSFGEDEFWSLKDRYQTTFDAYRSLRKRVLEKQKNEQEHKARIEMLEYQIAEIEAADLKSGEDIQLNQERDKLLNHKQIADTLTNAYALLDNEDFSSLNNLRSAMSDLQSLEEFDPDYKQLSSSLTEAYYVVEDITKRLSDVVDNLDFDGNRLMQLESRLDLLNTITKKYGGTVDDVLDYFSKISEEYNLLTGNDLSGDDLEVQLKNLEKELVERAGQLSQSRHELAVVLEDIIRQELQDLYMEKARFQVRFTKGKFNREGNETVEFYISTNPGEDFKPLVKVASGGELSRLMLAIKSAFARKEGKTSIVFDEVDTGVSGRVAQAIAQKIYKIGQYGQVLAISHLPQVIAIADYQFFIEKISDEHSTVSRVRLLTKEERIEEIAKMLAGDKITDAARNQAKELVEKG
