gi|00000000|ref|CP003949.1|  Rhodococcus opacus PD630, complete genome. 8376953, gc%: 67.37%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
8357017..8360889                   Virulence factor mviN; Pd630_LPD08035                                                N/A                 RhodococcusopacusPD630MQFAAIRVETSPPPVRDSGPSTAPQKQSNSRLLASTGSIAVATLVSRITGFAKQLLVLTLLGGSVASSFTVASQIPNMISELVLGAVLTAIVVPVLVRAEREDPDQGAAFVRRLFTATCVLLGTAALLATAAAPVLTTHVFLSADGKVNTSLTTALSYLLLPAILFYGLSALLTAILNTRQVFKPGAWAPVLNNVVMLTVLVIYYATPGEITLDPVRMSDPKLLVLGVGVTLGVVVQAMSLVPAIRREGISLKPLWGLDDRLKQFGGMAVAIILYVLISQAGMIVATRISSHADASGPAIYNNAWLLLQLPYGVLGVTVLTAIMPRLSRNAAADDTPAVVDDLSVATRLTMISLIPIITFLTFAGPEIGQALYGYGNFGTGDAERLGQAVSWSAFTLIPYSLVLIQLRVFYAREQAWTPTWIVLGITAVKIALSALTPMIASSDDQVVILLGVANGLGYITGALVGGWLLHRSLGNLQMANVGKTVWVVVLASMAGALVMLGADRLLGLDRLTSLFGGPGSMVRVMISGVLMLVVTFVILWFAKIPEIVSITVAVARKVRALRGRGAAPEPEADPLADAETELIPVVRATPHDFGAQPRGIERPGGLPYPGHERVGSPPGTGRSWAFENEGVRVSDDDVAGSKRAGGSTVQASERDSAAAPNGVDAPTTRISSESASTDSAKSDKQAGTDAPQKKDAATSSGSADTPKTGQSKETGDPADAQTKAAPKTPADDAGESPRDTRHMGAAPARDLSYDTGVIPITPAPGREPGAGPRRTPRGPKLIPGASVAGGRYRLLTPHGGSRGLQFWQALDVKLDREVALTFVDAEQRSTSAGPEGPQAILSRTLRLGRINSPGLARVLDVVRGSSGGIVVAEWTPGRSLREMADTKPSPIGAASAIRALAAAAETAHRAGGALSIDHPDRVRISINGDAVLAFPATLADSDSSSDVRGLGAMLYALITARWPLGDPSAPAGDPSGSNRPGSVGGMRLADRDSSGQPIGPRVIRPEVPFEISAVALRSLEPNGGIRTAATVQHILDQASVVNDKTEFIPVLRLGQRGPGTTDHALADPEALEAEKKKSNRMIAALVGLAVVTIIVLALLGFWLATFLTGSSSDAPLTEQDFGLTTSAEAPPNPESPAPAPAANVAPVSPSGATVFSPQGTPDSAANARLAVDGNTSTVWSTDSYFQPFPALKNGVGLMVTLDEPATLSSVWINSPTPGTNVEIRSAPSENPTLDQTQVLGSKVLGNGVTEIPVKSEGPSKNVLVWITGLSNSGGKNQSSIADIGFNAAT
8360937..8361518                   PHAGE_Sinorh_phiM9_NC_028676: DNA-directed RNA polymerase specialized sigma subunit; Pd630_LPD08036; phage(gi966199376)     3.35e-11            RhodococcusopacusPD630MRIFRGDSEGEPSDVDLLAAHVAGDRHAFETLLGRHYDHLWHVAKRTSYTTEDAADALQEALLSAHRNAGSFRRDAAVRSWLHTIVVNACLDRIRRNKARPAVSLSADEDDEPRDTRDYVSEVELSLVVERALAQLPPDQRTAIVAVDLEGRSTSEAAALLGVPEGTVKSRCARGRKKLASSLEYFRVEGNRS
8361597..8362343                   hypothetical protein; Pd630_LPD08037                                                 N/A                 RhodococcusopacusPD630MADREPDPSDAALPAPPYSEDLLADLHAGVLPESVSDRLWPLVRKDPQAMAVIDALDRVTDQLGALGRDHSVSTPIPADVADRINRALAAERDTPAEATVVPLARRRKWAAAAAGTFAAAAAVVVAVAVVTPDSRESEPAVALPSSETSPAPAVLDLGTDLDSGRLLTVIGSRQLGPLEDPAQLAECLRANGIEPSRPLLGSGEVRLDGVPGVLLLVAAPRPPQITALVVGRECGAGDPATIAVTEIG
complement(8362347..8362919)       putative HTH-type transcriptional regulator; Pd630_LPD08038                          N/A                 RhodococcusopacusPD630MNATGTGRPRDPRIDTDVLAVTRAMLVESGWEQLSMRAIATRSGVSRASITRRWPSKAHLVLDAILGATPDLTPFEGTDREGWVRWVVTGSAELFSRPEVRAATPGLLAAIRDHDDLRTALWRGFSGPSTQLFGSEGGPDESSTATAVLVLAAGAALFTSLIAVEDDTPELRAKILELLMPVARSERERF
8363009..8363980                   PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: base plate hub; Pd630_LPD08039; phage(gi100103)     4.60e-05            RhodococcusopacusPD630MKIAVTGGTGYVGAHTTLALLAAGHTVRLLVLPAESPDALLAAAGDDAARIEQVVGDIRDTQAVGRLLDGCDALLHAAGVVGTDDRREQLMWEINTQATAAILTRAAFLGLDPIIHVASFSALFPSPDAVIGPDSPTASGRSAYGRTKAAADRIARALQDAGAPVVITYPTSVVGPGLGSTQGVTEQGWGAIISGGVAPRFDGGMQMIDVRDVAAVHAAAMHPGHGPRRYVCGGELVEFNQLIDVLEHSSGRRLRRIPLSGSSFRTIGRIADVIGKFTPLSAGLSYEAAWLLTSATPTDDSRTRDELGLTWRPARAALAATFA
8364017..8365204                   NADH oxidase; Pd630_LPD08040                                                         N/A                 RhodococcusopacusPD630MTVPPPHPGIWEPARLGPLTLRNRIVKAATFEGVMPRGRVTDQLVDFHAEVARGGAALTTVAYCAVSPGGRVHANTLVLDRARVPDLRRLTDAVHAEGGSVAAQIGHAGLVANTLSNRTKTLAPSTRLSPPAMGLVKGATRDELDQVTRDFEDAARNAVEAGFDAIEVHLGHNYLLSSFMSPNLNKRTDEYGGSLERRAAFPRRVIERVRHAVGDSVAVTAKFNMTDGVPKGLWLDDSLRIAQLLEADGHLDALQLTGGSSLLNGMYFFRGEVPMAEFVASQPKLVGWGLKVYGPRIFPTYPFEEAFFLPMARQFREALSMPLILLGGVNRLDTIENALGEGFEFVAMARALLRDPDLVNKFRDRHVPEGLCIHCNKCMPTIYTGTRCVIRETLR
8365316..8366299                   PHAGE_Bacill_G_NC_023719: gp344; Pd630_LPD08041; phage(gi593777800)                  9.85e-78            RhodococcusopacusPD630MTTPSTVHELIIVGSGPAGYTAAVYAARAELEPLQFEGTQFGGALMTTTEVENFPGFREGIMGPDLMDQMREQAKRFGTDIRTEDVEELDLTGPIKKVVVNGETYQAHAVVLAMGAAARYLGIPGEEKLLGRGVSACATCDGFFFKDQDIVVVGGGDSAMEEATFLTRFARSVTVVHRREEFRASRIMLERAKANAKIRFVTNAAPVEVLGDNSVTGLVIRDTVTGETSTLDVTGMFVAIGHDPRSELVKGQVDLDDAGYVIVKTPTTATSVDGVFAAGDLVDHIYQQAITAAGTGCSAAMDAERWLAERGDITANTVAAAGSPVDA
8366346..8366669                   PHAGE_Dinoro_DFL12phi1_NC_024367: putative host-like protein; Pd630_LPD08042; phage(gi658311036)     2.42e-13            RhodococcusopacusPD630MSNTVTITDDSFQQDVISSDKPVLVDFWATWCGPCKMIAPVLEEIAGEHSDKLTIAKLDIDANPGAARDFQVMSIPTLILFKDGKPINTIVGTKGKAALLKELADVL
8366835..8368034                   PHAGE_Bacill_PBS1_NC_043027: hypothetical protein; Pd630_LPD08043; phage(gi100165)     2.54e-15            RhodococcusopacusPD630MHRLRHGDHGPAVAEIRGTLAGLGFLHNGVADSRREGTNGSHWIAPDAVFDHHLDSAVRAFQQQRGLLVDGIVGPATYRSMKEASYRLGARTLIYQLSAPLYGDDVATLQTRLQDLGFYVGRVDGFFGPQTHDSLSSFQREIGIAADGICGPATLRSLELLGTRVTGGSPHAMSEEEMVRSSGPQLSGKRIVIDPGLGGDTYGTIVRSPYGTISESDILWDLASRLEGRMAATGMETFLSRPHHANPTDIERASTSNAFDADLMISLRCDGNTSPSANGVASFHFGNSHGSTSMIGQVLTGFIQREIVARTPLQDCRTHGRTWDLLRLTNMPTVQIDLGYLTNDLDAAVLSNPRARDAIAEAILISVKRLYLLGQDDQPTGTFTFAELLAEELSSSERS
complement(8368053..8368751)       hypothetical protein; Pd630_LPD08044                                                 N/A                 RhodococcusopacusPD630MSTHVTSLTLDGLDKLSAHARRCVFWEMDPAAIHSSRGFCDQEFEKEAWLSMVMLEWGSCGQVAVMDGKPVGSALYAPPRTVPRAQLLPTAPVGADAVLLTSLRLEPAGEEQNLGTTLIQAVVADLVRRGVRALEAFGIRNTDGTGPIDTHGMASATAARECSPEECMIPADFLEDNGFEIVAPHHRFPRLRLELNRDHGWKEDVEAALERLIHTASVSMVDIGERTPVGAH
complement(8368909..8369991)       PHAGE_Agroba_7_7_1_NC_019519: hypothetical protein; Pd630_LPD08045; phage(gi435844368)     1.55e-08            RhodococcusopacusPD630MSQTRKGGLGRGLAALIPTGPTTTGPGLGNAAADVVIGADRRNVLTAPAPNSSDAATDKKTAPASTGNNGDSNGADGASGNGAEPLPSPTGAVYREIAPDLIERNPKQPRQVFDDDALAELVHSIREFGLMQPIVVRPLDDGKFQLVMGERRWRASQEAELETIPAIVRETGDDAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFEVTHEELAAKIGRSRPVVTNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGADAQEVMAARIVAEGMSVRATEEAVTLANRSDDQAAQPAQRRKPIQMPGLQDVAERLSDSFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVGMMEAQKADS
complement(8369988..8371001)       PHAGE_Clostr_phiCDHM11_NC_029001: putative ParA protein; Pd630_LPD08046; phage(gi971764696)     8.36e-14            RhodococcusopacusPD630MSGGPESAVSRETTSRETDHQSDQATSSGNGDDGFTAPYNGISVEETPIGAAAHRASQVLHPHSVSLPKPPERRILTIANQKGGVGKTTSAVNLASALAVQGLTVLVIDLDPQGNASTALGVAHHSGVPSSYELLLGEVTAAEAIQKSPHNDRLFCIPATIDLAGAEIELVSMVAREGRLKGALSEKALGEVDADFILIDCPPSLGLLTVNAMVAAKEVLIPIQCEYYALEGVGQLLRNIELVQAHLNPDLHVSTVLLTMYDGRTKLADQVAEEVRTHFGDAVLRAVIPRSVKVSEAPGYGMTVLDYDPGSRGAMSYLDAGRELAARTAHITKQEQR
