gi|00000000|ref|CP004033.1|  Chlamydia pecorum PV3056/3, complete genome. 1104552, gc%: 41.13%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(350106..351692)         PHAGE_Bacill_G_NC_023719: gp245; CPE1_0314; phage(gi593777701)                       1.46e-11            MSIVLDKIGKSLGSRILFDDVSIVFNPGNCYGLTGPNGAGKSTLLKIIMGMVEPTRGSISLPKKVGILRQNIDSFGEVLVLDCVIMGNSRLWQALQRRDELYTQEFTDAIGMELGEIEEIIGEENGYKAEAEAEELLIGIGISSEYFSQKMSTIPIDLQFRVLLCQALFGQPEALLLDEPTNHLDLYSISWLGNFLKNYDGTVIVVSHDRHFLNTITTHIADIDYDTIIIYPGNYDAMVEMKTASREQEKADIKSKEKKIAQLKEFVAKFGAGSRASQVQSRIREIKKLQPQELKKSNIQRPYIRFPLSDKASGKVVFSLEGITKNYEEKAVISPFSLEIYQGDKVGVIGNNGLGKTTLMKLLAGVENPSSGAIKVGHQAVFSYFPQNHADVLKDCGQETLFEWLRNRKTGINDQEIRSVLGKMLFGGDDAFKQISALSGGETARLLMAGIMLENHNVLILDEANNHLDLEAVSALAWAINDYKGSVIFVSHDRGLIEDCATKLLIFEKERIVFFDGTMAEYTASIKS
351407..351419                     attL                                                                                 N/A                 GGAGAGCTTGCCA
complement(351744..352682)         PHAGE_Mycoba_Panchino_NC_031281: hypothetical protein; CPE1_0315; phage(gi100032)     2.97e-22            MISAFYSFLDSLKAKSVSLHTLRNYSIDFSKFKEFIETHKQLPTTPKITLHMKFQETSDLPLSLLTKDLIRLYISYLIEQGKSKRTIKRRLSTLKSFSRYCLKMQLLFEDPTENIQGPKLPKELPSPISYEQVEILMTMPDVSKYTGLRDRCLLELFYSSGLRLSEITAINRQDIDFEAALIRIFGKGKKERVLPVTPCAIRWLHHYLYHSERMSIQKDTQAFFLNRFGTRISPRSIDRKFQHYLQLSGLTGNITPHTIRHTIATHWLENGMDLKTIQALLGHSSLETTTIYTQVSIKLKKHTHETSHPLGK
complement(352727..353647)         ribonuclease Z; CPE1_0316                                                            N/A                 MSSRELIILGCSSQQPTRTRNQGAYLFRWNNEGLLFDPGEGTQRQFIFANIAPTVVSRIFISHFHGDHCLGLGSMLMRLNLDKISHPVHCYYPASGKKYFDRLRYGTIYHETIQVIEHPISEEGIVEDFGNFRIEARRLQHQVDTLGWRITEPDTIKFLPEKLRARGLQGPIMQELIKHGSIHHLGKTTYLSEVSYQRPGDSIAVIADTLPCQAAIDLARNARLMLCESTYLEEHRHLAESHYHMTAKQAATLAKKAQAQQLVLTHFSARYVNTQDFYLEAASIFPNVAAAEEYCSYPFPKNPASK
complement(353737..354513)         hypothetical protein; CPE1_0317                                                      N/A                 MLSLSSLIGTFSSSKKSAVQLQPIHKCQRIQKITLTALLILLVLSLVAMIGAFISTVFTPAGIKVGLILLGVFLTTALLTLFCLCAILKPKAISGKSVTKPEVRPKDLDLTKLDTRYNALLHEKIKEDVKKSEQDSTERATPTGKTRKLKTAPPSRKTRIKTSISSSSSDSDSEYYSVSSSDSEYYSARSSSPSSTSSRSRSPSPTPSSSSSSQYASTDSSRISSRSPSPASSTASSLTPPSTPTPVKRRFLILKRHE
complement(354627..357080)         PHAGE_Sinorh_phiM9_NC_028676: sliding clamp loader subunit; CPE1_0318; phage(gi966199536)     2.78e-05            MDSTINTDTPILDPNSDEVEKLLDETEDSEEKTNNRSLPKELFILPLNKRPFFPGMAAPILIESGPYYEVLKVLAKSSQKYIGLVLTKKENADILKVGFNQLYHIGVAARILRIMPIEGGSAQVLLSIEERIRIIEPVKDKYLKAKVSYHPDNKELTEELKAYSISIVSVIKDLLKLNPLFKEELQIFLGHSDFTEPGKLADFSVALTTATREELQEVLETTNMHDRIDKALILLKKELDLSRLQSSINQKIEVTITKSQKEFFLKEQLKTIKKELGLEKEDRAIDIEKFTDRLNKRHVPEYAMEVIQEEIEKFQTLETSSAEYAVCRNYLDWLTIVPWGIYSKEYHDLKKAEITLNKDHYGLEDIKQRILELISVGKLSKGLKGSIICLVGPPGVGKTSIGRSIAKVLHRKFFRFSVGGMRDEAEIKGHRRTYIGAMPGKLVQALKQSQSMNPVIMIDEVDKIGTSYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFILTANVLDTIPDPLMDRMEILRLSGYILEEKLQIATKYLVPKARKEMGLTARQVVFQPEALKHMINNYAREAGVRSLNGNIKKVLRKVALKIVQNQEKPKAKNSLVKITTKNLQDYLGKPVFSSDRFYEHTPIGVATGLAWTSLGGATLYIESVQVPSGKTDMHLTGQAGDVMKESSQIAWTYLHSALEKYAPGYPFFSKSQVHIHIPEGATPKDGPSAGITMVSSLLSLLLDTPIINNLGMTGEITLTGRVLGVGGIREKLIAARRSRLNILIFPEDNRRDYEELPDYLKKGLKIHFVSHYDAVFKIAFPQK
357485..358129                     putative glycoprotease family protein; CPE1_0319                                     N/A                 MHFHPRYLIIDTSGYHPFLAYVDSQRVLQYWDLPVGSDVGPVLEFLCKNQNFSFQGIAVAVGPGNFSAPRIGLSFAQGLAMASNMPLLGYSSLEGYLTPEDKGKALMLPLGKRGGVLTLSEEISDHNFMLKKNQGVGPGHLLSYAEASEYCLAHGYYHVISPKPQLFIEHFSEKILVEETGPSIDRVHRSLIPQLLLDCNEALVPDYRSCSCFF
358305..358481                     PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; CPE1_0320; phage(gi460042545)     5.91e-05            MPSVKVRVGEPVDRALRILKKKIDKEGILKAAKSHRFYDKPSVKKRAKSKAAAKYRGR
358516..359694                     PHAGE_Cellul_phi17:2_NC_021798: chaperonin DnaJ; CPE1_0321; phage(gi526177822)       5.95e-10            MDYYSVLGVAKTASQEEIKKAYRKLAVKYHPDKNPGDAEAELRFKEVSEAYEVLSDPQKRESYDRFGKGGPFAGAGGFGAGGMGNMEDALRTFMGAFGGEFGGSGSFFEGIFGGLGEAFGMRSDPSGARQGASKKVHITLSFEESASGVDKELVVSGYKTCETCSGSGAATPQGIKRCERCKGSGQVVQSRGFFSMASTCPECGGEGRIITDPCRECRGQGRVKEKRNVHVHIPAGVGPGMRLKMEGYGDAGQNGAPSGDLYIFIDVEPHPVFERRGDDLLLELPIGFVDAALGMKKEIPTLLKSEGTCRLTIPEGIQSGTILKVKNQGFPNIHGKGRGDLLVRISVETPQHLSEEQKELLQRFASTEKAENFPKKRGFLDKIKGFFSDFTV
359729..361765                     PHAGE_Synech_S_SM2_NC_015279: transketolase central region-containing protein; CPE1_0322; phage(gi326781943)     1.32e-08            MVLLQNQVEASIREVLKLVWILRLAENKMLLLSRQSDSGGTFQLSCAGHELAGIVAGKSLLPEKDWSFPYYRDQGFPLGLGGDLAEIVAAFLARTSSNHSSGRMMPYHYSHKKLRICCQSSVVGTQFLQAAGRAWAVKHAQTDEVVYVSGGDGATSQGEFHEMLNYVALHQLPLVTVIQNNQWAISVPWKEQSAMDFVQLGRSYQGLAVHEVDGSDYMALLETFSTAVKQARENATPALVLVDVVRLQPHSNSDDHTKYRSPLDLEQSYVRDPLKRLERDVVELYGGSSEELREIYAQAEEEVARAFQIAEAKPFPCKGGSSHEVFSPHTVALIDYESSQEAQALRDTQPKVMRDAISEALIEEMTRDSRVVVFGEDVAGDKGGVFGVTRNFTKHFGEQRCFNTPLAEATIIGTAIGMALDGIHRPVAEIQFADYIWPGINQLFSEASSMYYRSAGEWEVPLVIRAPSGGYIQGGPYHSQSIEGFLAHCPGLKIAYPSNAADAKALLKAAIRDPNPVVFLEHKALYQRRIYSACPVFSSDYVLPFGKATIVYPGTDLTIVSWGMTLVLSVEVAHELSTLGISVEVIDLRTIVPCDFATVLESVKKTGKLLVTHEASEFCGFGSELVATMAEQAYLYLDAPIRRVCGLHAPVPYSKILENEVLPQKEKLLQAAKALADF
372018..372030                     attR                                                                                 N/A                 GGAGAGCTTGCCA
