gi|00000000|ref|CP004267.1|  Borrelia crocidurae DOU, complete genome. 916000, gc%: 27.53%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(265691..268141)         PHAGE_Entero_vB_KleM_RaK2_NC_019526: hypothetical protein; BCD_0254; phage(gi422936959)     1.15e-05            BorreliacrociduraeDOUMKSREIEYFMEEIKDTVFKEKKRSKNSGGILPHFDKPVRVPLIAVPSHPVFPSMFIPIVIVSDIDMKAVDYVIKGNGIISLFVLRDKFLEKSGNNKDGKLTINYQKDIYSVGVTAKIVKKINLPDGGYNIFVSTIDRVKFVKVVLNEDFPIIEVDYLKQIPIKKYDVNLKAIYSSILLRTKEIFSHRKMPEFQLNMVNIEDKGRLCDVVAGMIASSKESHQEVLETLSVKDRLKKVLELLYEELNLIEIQNKIAKGIQEKLEKQQKEFFLKEQLKAIKTELGVGDEKNSEFLKMKSKIDALALKGEALDAVGRELEKFSFLERHSSEYIVVRNYLELITNLPWGDTKVDFGKFNLQRAEKILDKTHYGMREVKDRIIEYISVLKLRKSQKGAIMLLVGPPGVGKTSIGAAIAEVLNTKFFRFSVGGIRDESEIKGHRRTYVGALPGKIIQGLRITKTNSPVFLIDEIDKVSSSHYGDPFSVLLEVLDPEQNVNFRDHYLDLPFDISNVFFILTANSLETIPTPLLNRMEVIQLSGYVDDEKIEIARKYLIPKVLKENGVDKDSLKFQSSSLVQIAREYARDNGLRNFEKYLKQIVRKIARKLVEDKSVKAYQISKENLEEYIGIPVFRKEKFLDKAMSPGMVMGLAWTNYGGSTLIIETVKTESKSPGIKLTGRLGDVMKESANIAFTYVNSISNELKLHKSFFEKYMIHLHIPEGATPKDGPSAGITIASAFISLVLNKTVRPNLAMTGELSLTGNVMAIGGLKAKIIAAKRNGVEHIIIPKANKVDLDDIPINIKNGINFHLVDSMKEVIKLLF
268210..268896                     Hypothetical protein; BCD_0255                                                       N/A                 BorreliacrociduraeDOUMLFNKINAIITNLYHKKNYSLLNLFHSKGIIHTIIHDYTIEKFKSNINNLVKANFEIVKKNNLCKIIEVNDEEFIVQDLTYEKLTIIKLWIKLINLSFDEGECFKLFNEATEMLNNSSLRKAQLIDLQYKIRFLIIKGLLYLSNLCFKCNKQIKENYYYDTHIHGFNCIKCSNNKNQYINTESFKYLENTTQTNINTTLNAKLTNRTKELLTLMIKNKLNREFEQILL
268877..269668                     PHAGE_Bacill_0305phi8_36_NC_009760: RecJ; BCD_0256; phage(gi156564062)               3.57e-28            BorreliacrociduraeDOUMSKYYSKESKLEQEMKIWEKKELNIAEENIVNIKKKYNISLFEATLLLNREIKEEDFLFFLESSVNLMHNPFFLKNIDKFIYRINEAILEKENILIFGDKDADGITATIIMYETLKDFGINVTYKIPSNGEFYGLTKEVIDKAFKDKITLIITVDCGISNIEEINYARSKNIEVIITDHHLPNKEIDTENIIIDPHLKGDLYPFKEIAGCYVSFKACLALYLSTTNFYNKDLIFMFLEKFENNIKLHAIEINNYILKTYNSRQ
269865..271031                     PHAGE_Bacill_0305phi8_36_NC_009760: RecJ; BCD_0257; phage(gi156564062)               2.46e-21            BorreliacrociduraeDOUMQITKYFKYREINIYEKLYYMFYNIIFETNKNLLQNCLKRLKFVAIGTIADNMPIIDENRIAVKEGLKEIELRENISINYLLKEVNILTKPIITSTDIAFKIAPILNSTGRLEKADITIRFLLSQDTNKIENKFKEIKNINTLRKYKEDISWNTHNENTIFKNDKFIVCYDKNTPKGISSRMATRLSSYYKKVAVFLTKQSDIIKGSIRSNNKVNSKELISMIPKHLIINSGGHKAAAGFTLYENVLNEFIRELENALEKIEYKELQEDSILIDAIIPKDLSKTELIKTIDLFEPYGHDFREFILMMENVCIQDIRTIDKNGTSKHISMKIINNIDYYKAIYFNGTQTIQELGIRDGQNIDIIFTISEDIYNQNDKILKIIDIKKRKN
271031..271987                     PHAGE_Clostr_phiCP7R_NC_017980: putative lysozyme-peptidase; BCD_0258; phage(gi389060393)     7.00e-15            BorreliacrociduraeDOUMHNIKKLLFAFTLAFIFIIGLFKVNAKNNDITKIYYKKETFQGSNIYFISNKNFKKLSLLSTNQKPILSASPFKCNISNRDYYIALIGITPMIKEGKRKIQIEFENKQYIKEIEIKKFKFKKTTVKLNKSKSKLIKSQQSPKAKKQALTLWNIIGSVGDTTIYHYDTFVHPIKDKYQITSPYGDQRIYMQDNQKISSQKIHNGKDYAPFKKEKTPIFAAGRGKVVFARDREITGKTVIIQHLPGVFTIYLHLSKFGVKENTIVNTGEYIGNVGNTGISTGPHLHFEIRINGIAVNPDFFLEEMLIDKNQIINNTKKIE
272005..272214                     PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; BCD_0259; phage(gi460042545)     4.92e-06            BorreliacrociduraeDOUMVTVNVDKNEGLEKALKRFKRMIEKEAIIREWKRREYYEKPSTIRVKKEKAFKRKQAKKVRKLKQKIGK
complement(272264..274615)         PHAGE_Mycoba_Optimus_NC_041844: head completion protein; BCD_0260; phage(gi100195)     2.20e-91            BorreliacrociduraeDOUMKNFYRYFQFLFFFMLAVILFSLLVALTPIGNIFIFFVFNLIGHMLLNTFSFLSFYLILYPLVNWYVYCNNMFSKKFIFNWNYTVVLFFTLTFWLRINSDFEGSNFVNWFLSNFGIIVGNLFVCLLFILELIVWVYLNYVFFKDASFILTTFHFITFKLKILFENMFSYLPFLSTLKIKKDIKVYKDCKNNISSDRILNKEDNIINDEEYQALWSFKEFLRNSNKSLDVDLDKTIFSKSEVMDDKLPKDESLQEVQCDLNTENNCQYKILRSECEDSRLVVSGKIRASDIRHNGIINNIVRDEYENDTLFKVKSDENYSIDISVFAQREPENETEDVEYEREIQKQAMLLQETFREFNINAKLIDIIRGPVVTMYAVRPDKGIKLSKITSISDNIALRLAAVRVRIIAPIPGKEAVGIEIPNKRRKFILISEIINSQEFQNDFKVPFALGKEISGNNVVFDLVTAPHLLIAGATGAGKSVCVNSLIASIIFSKSPDDVRLVLIDPKVVELKLFNDIPHLLTPVITNVNRALEALRWCLDEMERRYVILDNFFVRDINSYNKKIVEEGLNEMPLPYLVIIIDEFADLILSARKDLENLISRLAAMARAVGMHLVLATQRPSVDVITGVIKANFPSRISFMVASSMDSRIILGTSGAEKLLGKGDMLYVSPITPFPQRIQGGFLTEKEVYKLVEEVKKFGKPNYIDDEIFIDSVVESDTLVINSSDEPMFEEALEIVRSTKKASASYLQRRLKIGYNRAARIIELMEEMGYIGPVNGSKPRDVFI
complement(274628..275428)         Undecaprenyl-diphosphatase (Bacitracin resistance protein); BCD_0261                 N/A                 BorreliacrociduraeDOUMDNILRVIILGFVQGISEFLPISSSGHLLLLKKFMNIDLPIVFDIYLHFATVLVVIIYYRRRILELVMVFIKFILRKSKMTELDSSNLNLILLILIITFFTALIGIFIEKFKVLFTFKLVLFNFIVTSILLFLIEFRIKIFNFKKNIFFSGLLIGIMQGIGAMPGISRSGITIFASILLGFSRTKSLEISFLSLIPIVFGSLFLKYNDLFKSDIIFNIFEINLGAIFAFIFGLFSISLFVKMLKNSKLYYFSIYLVSVVSLVYFLV
complement(275442..277592)         PHAGE_Bacill_SPbeta_NC_001884: putative transglycosylase; BCD_0262; phage(gi9630157)     4.77e-15            BorreliacrociduraeDOUMKKVMFKKIIYLFLLNLLSCSFVKESLSSNILKKSINSFDLNHLNWLWNFDYVGQNFDKYFGIDSDSYVYVAYLFKKIGYDEKFREYMHKAINSNNNIASQFAGVKLLEYYNSRREYYEAELVGRKLYNKYNDNKFIILGYFKSLYWQKKNNEALLVLNKLEKMDFMPAQENENLLFKAVLYFNISDINTSLIYFKKLFENLPAEYLHVRAHDYLVLEGKDNLLNSTFLSLVKFKALVANGDFKGAVNILDDSFKKYYNNFVFLNDVYKTFVSLGYINKALSFFSNLDSVYKDYYLGLINLKLKKDVGFVTILKYLENSSIINEPYRLEMLNEIFRNFIFMKNTRNYFSKNIANFYTSKDKGNFAFIKVLDEYILEAVQLGDYDNLYLLYYNGQNVIDNAVLARLAFLNARLIYHKFIKSQSVGEYRELLRSAIKYDQISYASFMSKYLLDQNINDLFENALDINYDQSDYERFLEGFLKFNLYSYVSVFVANDFKNGYRFSPNFYRNLYDEFVKHEYYYESILAINYLVRQDFSALNKDDYKRLYPCLYTALIKYWSGKRELESSLVFSLIKAESSFKRDAVSKPGAIGLMQIMPATSADVSREIKYYKYYPYDLKQPKDNVIIGTHYLRKRIDMLEDVYKALASYNGGIGNVRKWEKDYGHLPKEIFIEAIPFGQTRNYIKKILVYSVLYDALYERKGMDFIIEYIMGKFSKRF

#### region 2 ####
452220..452984                     PHAGE_Entero_EF62phi_NC_017732: chromosome partitioning ATPase; BCD_0428; phage(gi384519759)     4.94e-18            BorreliacrociduraeDOUMTIISIINQKGGVGKTTSAINIAYTITLLQKKVLLIDIDSQGNTSSGVNIAKKETKNSSYELIYKKKKIKPIKNFNLDIIPSSLKLALLEKELINEIARENFLKNALEQYKKDNYDFIILDCPPTLSILTINALVASKYLLIPIETEFFAFEGINLLLDTITAVKQINQNLEIAGVFINKYDIRNKSKEKYINLLQKVFKEKFLNTKIRKNISISKSQEENIPVHLYNKESNAAKDFLALTKEIIEKIEGKNVR
452974..453663                     PHAGE_Strept_9871_NC_031069: hypothetical protein; BCD_0429; phage(gi100027)         5.37e-14            BorreliacrociduraeDOUMSDNLDTLMTLMGQKLDKNQNNDNNLTKQELIVIQNKNFKYENLDQEIANFLKKKQYEIFNIFHNTYTEIGRILKEAQEKLRGSNQYNGLFYKWFTSMGFKKDKVYSLISRYELLVENSDKQSIIKNLPLSLSYEISKKSCPTNLKMEVLNGKIKTLKEFKSRHQQNNNNKNNTKIQLKKEDIIKLIELLLQKLENIKKIDLDQINNKKEFLIILQEIKQKIKNIKKIT
complement(453656..454438)         PHAGE_Gordon_Nyceirae_NC_031004: late promoter transcription; BCD_0430; phage(gi100046)     1.67e-14            BorreliacrociduraeDOUMDESLKMVDINLLDIDKSQPRKSINLAELEELSISIKENGILQPIVVYPNNGRYNIIIGERRFRAAKLLGMSQIPVIEIEATTKDKDFMSLIENIQRENLTPVEEAYAYKNLMDKHALTQKALSEKIGKNRSHVANLVRILELEQEILNSLHKKEISLGHAKVLLSLKDNQDRYALYLLIIKKKLSVRDAENYVKNLYKTINDKSEISRDPFLNSIKEFLISRIQTKISIKGSKEKGKIEISYFTSSDLKRIISIFENIK
complement(454575..457022)         PHAGE_Bacill_AR9_NC_031039: ssDNA binding protein; BCD_0431; phage(gi100044)         8.19e-126           BorreliacrociduraeDOUMIGALMAIENNKEQVLNIKIEDEVRTSYLNYAMSVIVSRALPDVRDGLKPVHRRILYSMHEMGLKSDKSFKKAGRIVGDVLGKYHPHGDQSIYEALVRLAQDFSLRYPIVSGQGNFGSIDGDPPAAMRYTEARMAKIAEELVIDIDKQTVNFKPNYDDSLLEPEVLPAAFPFLLVNGSSGIAVGMATNMAPHNLREVCDAIIYMLEHDDVSIYDLIAIIKGPDFPTYAEIIYNENLIKAYTTGKGSVVIRARYHIEEKSEDNISIIITQIPYAVNKSSLLMKIALLIKEEKLEGVSDIRDESDREGIRIVLEIKKGFDPHVVMNLLYEYTELRRNFSINNLALVNGIPKQLNLRELISEFIEHRKNILRRRVEFDLKRAQEKAHILEGLNIALRNIDRVIEIIRFSRLVKDARECIIREFQLSEIQANSILDMKLQKLTSLEVAKIEEDFKVVLALIKDYEDILISPSRIVNMIREEIINLSLKFGDDRRTKIIYDEEVLKTSMSDLMQRENVIVILTKQGFIKRVLQDEYKLQGIGGKGLGSFDLQDSDQVNVALCVNTHDFLLMISNEGKLYVINAYGIKDSSRTSRGQNIRELINLGEKEEILAIKNCSELSVDNYLLITTANGKIARIETEGFKTVKSRGVIIMKLDDKDFVTSAEIVSRDDKIICISKKGNAFAFSSNDIRLTHRGTQGVSGMKVREGDMLIKALAIKQGSHLLIMSENGYGKRLEVSKVTGLKRGSTGYTCYKKSDEKAGEVVDAITVSQDDEILLISKSSKVLRTLVDKISEQGKDARGMQVLSLDEDKLVAVSKFIK
complement(457019..458938)         PHAGE_Bacill_PBS1_NC_043027: tail sheath stabilizer and completion protein; BCD_0432; phage(gi100209)     1.75e-92            BorreliacrociduraeDOUMCGRFMSYVASNIQVLKGLEAVRKRPGMYIGSVSINGLHHLVYEIVDNSIDEALAGFCDRIEVVINSDNSIMVNDNGRGIPTDIHEEEGISALELVLTKLHSGGKFNKGTYKVSGGLHGVGVSVVNALSSFLEVVVSREGKLFKQTYSRGIPTSEVEVVGVSSTTGTKVTFFADSEIFETLKYDFETLSRRLRELAFLNDKIRISIEDRRLGEEKFLEFYFEGGIKAFVDYITNNNKNIQSSPYFIEGVCNDVIVSVGLKWTEGYSDNTLSFVNNINTKEGGTHVAGFKSGLLKAMSEAFRDSKISKKDIPNLTLDDFKEGLTAVISIKVPEPQFEGQTKGKLGNSYIKKIVETIVYDGLLRIINENFVEIDIILNKAIRAARAREAARKARESERKKSAFESLALPGKLADCTSKNPAEREIYIVEGDSAGGSAKMGRDRFFQAILPLWGKMLNVEKTREDKVITNDKLIPIIASLGAGVGKAFYIEKLRYHKIIIMADADVDGSHIRTLLLTFFFRYMRELIDNKHVYIAMPPLYKIKHENKVHYFYDDFEKETFLGSIDVGKRNKVSLQRYKGLGEMNPTQLWETTMNPATRKMKLIEIDDAIQAEKIFVTLMGDDVEPRREFIEQNALDVVNLDV
459171..460625                     PHAGE_Bacill_250_NC_029024: DNA replication protein DnaC; BCD_0433; phage(gi971766633)     5.31e-08            BorreliacrociduraeDOUMQEGKNIWSLILAAIRKELSEEEFYIWFENLYFIDAIGENIKIATPNSFHKNQVEKRFSKRIKEILIEKGHSTINVEFIHSQNELKDHNTESKDISLKAITHQQDLQTKNKDIKTHAKNIINNTKQYSIKEEIHIKYRNPFLKKKYTFENFIIGTNNKLAYNASLSIAKNPGKKYNPCLIYGGVGLGKTHLLQSIGNKTEELHKEFKILYVTAENFLNEFVESIKTNETKRFKKKYRHLDMLLLDDIHDLQKKEGIQEELFHTFNALYEDNKQMVFTCDRQPSELVNFTDRLKSRFTRGLNVDISKPNFELRVAIIEKKAEEDGIKVPKNILNLVAKKVTTNIRDLEAAVTKLKAHIDLEDIEIDTNIVDKIIKEIIAYENDNTNTPNKINIENIKKVILRELKLTNKDIEGNSKKPEITKARHIYAYLLRNFTELSTIEIGKIIGGKTHSTVLYSINKIDKDRNKNLEINNLIIELMNKINKN
