gi|00000000|ref|CP004384.1|  Burkholderia thailandensis USAMRU Malaysia #20 chromosome 2, 2821713, gc%: 68.26%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1561168..1561179                   attL                                                                                 N/A                 AAAAAGTACCCG
1561451..1561462                   attL                                                                                 N/A                 TTGTCTCCAAAT
complement(1562611..1563027)       PHAGE_Ralsto_RSL2_NC_028950: hypothetical protein; BTRA_4669; phage(gi971759696)     1.13e-34            MEFPIAVHKDDGSVYGVTVPDIPGVHSWGETIDDAIKNTREAIVGHVETLIELGDDVEFTCSTVEELVAKPEYAGAVWALVSVDLSQLDSKPERINVSIPRFVLHKIDAYVASRHETRSGFLARAALEALNEGKVRHA
1563530..1564057                   PHAGE_Burkho_KL3_NC_015266: gp51; BTRA_4670; phage(gi327198096)                      5.23e-46            MGSALIREGDTTSHGGRVLAGTSTNIVYGKPLALEGDMVSCPKCGGIYPIVGVRNRSMTFGDRPVATEGDKTACGATLIASQGTATVELTSGAGGPVGKGKSVVPRPAAQSNEAYRGRFQLVDDKTREPIANHPYTVTSADGQTIQGTTDATGHTDWLSSHQASSLSFQQPGSDA
1564054..1564788                   PHAGE_Burkho_KL3_NC_015266: gp50; BTRA_4671; phage(gi327198095)                      3.55e-39            MSGGYAPGASPGGMSAGSGQTTQVGLSAARLSPKDREVLCHTFCECRRIGVATKAGTIQRQRCVQMRLGLPNEVSKMQTGVPTEYRPEQPYDMTTQPPEPIMDYDDPLEPHSSIRQWIKDVWPDKGKKYQKGDVRRPDVVIVNDPSKPPVQSNIKTVVEMKFPGDSYGPDQEDDYIEIAGSPSKFAHLGAADCGCGDDDGQKKTARSKQSARQSDLDELFGGNSSAPGSPPLPPMPLPPLPAFP
1564798..1565913                   PHAGE_Burkho_KL3_NC_015266: gp48; BTRA_4672; phage(gi327198093)                      0.0                 MTNEEIEAWAKDPRRADTLPFGLYEPPYRKGITGAALVVRGVLYFRNGFTPDVRQALVRCFKQYNAAIEEYQHALEVAAGQSPSKAGPLRWFYSEGEEPTQYDKAPGFESLARSVPANKTLAVAMTSAEHKLAAGFYEFTVFALSDWKAERKRGLDGLVFTVPRAFIVQRPGVFEAMFRAFAEALPTVSGHGGLAVNMPPMERRPNEASEYFYARRFGPGIDVGDPMRSNVRKLYTKIKTVDWLNALDAELVRAVGGTSSLALPPNWFARQPLRDGGLIIQAGVAPMSGVSNGTGIPVAPPAAYVLLNHALRQIVADTLDTLQDGTLDSTAPLLNTVVATEAWLRRFNVPDDQINGYWVELHKTPKLSPST
complement(1565984..1566559)       PHAGE_Entero_phi80_NC_021190: DNA invertase, resolvase, site-specific recombinase Pin; BTRA_4673; phage(gi824479608)     6.91e-26            MSRTFAYARVSKIDQTATNQLHEIEAAGFAVDKRRVVTESISGSVGASQRPGFSKLLDKMEEGDVLIVTKLDRLGRNAMDVRATVETLAERSIRIHCLALGGVDLTSAAGRMTMQVLNVVAEFERDLSIERTQAGIARAKSEGKAMGRPSALTKQQQQDVRQRLHEGASVASLAKFYGTSRQTIMRVRDSV
complement(1566881..1567495)       hypothetical protein; BTRA_4674                                                      N/A                 MTRSLDNFLSGRYQACSLNYNEYVKKLFGKRYGLDSYLTYSIQFIELSEEQISGTSAHRQIPERLRAYVAEFDAALTHDEYNNPRFSYRLLFKKKLVNKAGQADRVIEFIDPNSELAKTIDKEYWVKKDVERAKYLPTRVVEEIRKAGFPKFRVQPDHVNLWKSEDAKNPSKGYGVQVEGAWYWYESWIKRCIDLCKAAGDKYT
complement(1567969..1568619)       putative conserved hypothetical protein; BTRA_4675                                   N/A                 MLISKLVELYPSVYHMAERDTWESIRTRGLLSTSAVLDHFGLTGADRVQYESQQRPIKMEVILNHPASIVLRDQKPMPRSRLITALQDGITPEDWYRIINAKVFFWATRTRLLSLLNARDYRLLEHDVLTIDAAPFIRAYADQIWLCHMNSGNTWPWPHPRGANTFRRISDYPTGRSGRPLKEVAELVVDHSVPDIAQYVIEVNRMRGAEVLRRIL
complement(1568629..1570314)       PHAGE_Vibrio_J2_NC_027393: adenylosuccinate synthetase; BTRA_4676; phage(gi849255873)     4.80e-35            MSNRQIVVISGKACSGKTGLADLLEQEFQFRVVRTRQVLVDFCDAEIDENELVTLITRKQEVNETTDSRWLLRATLEVLEGLDPAKSVVVDHVSSPLQVAQFRRVFGENLIHVHLYASKETLQERYAQTEAAKKNVLSYDEIDRLKDEKDIEALKNDADVRIYTTRSDAQDTLVRVAARLHLFTPPDIRCVDVLIGGQYGSEGKGNVVSYLAREYDVMVRVGGPNAGHTVASANGPYTYHHLPSGARDVDSRLLLGPGMTIRLKGLFEEICDCNIGPDRLFIDPQATIIEDKDIESEGQHLVSTIASTGSGSGAATARRIISRGSSDFRMARDVPALAPYVGTPGNYHGATADRLEEAYRKRQSILLEGTQGSGLSLFHGTYPYVTSRDTNVAGCLAEAGISPSRVRKILMVIRPMPIRVGDPDGNEGHTSGPLKHPTTFDAIARHADLDAAALHSAEKTSTTKRKRRVGWFEWDQFRRACALNAPTDIVLTFADYINASNRNARRFEQLTQETIKFVEELERVSQAPVSLINTRFPRQEEGIDDLRSLIDRRNWTARSRA
1571349..1572395                   hypothetical protein; BTRA_4677                                                      N/A                 MLHGLYRSFGAVVDEIEYETNRLETIALRNQRIPVNPLSDYFCEDLLAPLERANITRLRKEWRDMAGSLVQIIDAARDRHWKRDGPYRLRYCWRQAEIVEEEAYPAWAHHATQDLLRNAYSIFKRGGEAEADDGDLLTLARHYIRPHVSLTDAHLLSGLAIREAVRAVEHLTTLVDHVEQDEHVAVWLKEWLRQDVQDNDYARKAYGAELNARIDRAALDIFYPDLETVTDYRIHAEKLLLLADVCATGRLSSTESSRLFAQLEVREQHIEELDSAVAEMRAKRESFQIKGTLARTKLSSADKDEVKRQYDDLIAAHPDKQVKDIELTLADQWGVARSTIQRATGKKR
1572488..1572706                   PHAGE_Burkho_KL3_NC_015266: gp52; BTRA_4678; phage(gi327198097)                      2.32e-11            MTVQFQATAIQPRRIVRMPALLERVGLSESEVRRRIKAGTFPRPVKLGPRAIGFVVADVDAWLEALTTRVAA
1573301..1576153                   PHAGE_Escher_vB_EcoM_ep3_NC_025430: primase; BTRA_4679; phage(gi712913189)           4.31e-53            MSEFERASVALGYVPADDRDTWRHAGMALKAEFGEEGFALWNEWSQGAQNYNARDTRDVWKSFKGGKITINTLFHLAKLGGFDPRAHRAKPVDPEQRERQHAERAAREAAELAALAEKQQAASALAESIWSAAEPAPTDHPYLVRKRIPADALRVYRGNLSLGTAACDGALVIPARDADGQLWTLEFILTDGQKRYLPNGRKAGCFSLIGGPVSSVLLIGEGYATCATLAAVTGYPAAVAFDAGNLHAVATALRGRYPDARIVVCADDDHATNGNPGVTKARAAANAVGGAVAVPDFGPNRPAAGTDFNDLAAHLGPDAVAAAVRAALVPAGASDADRGKASPFATKPAKRPKTARAQDGTWRFEVDDEGVWYHGFNNQGDPLPPHWISTRIDVIAETRNEMSSEWGYLLEFTDRDGIRKRWAVPAGLFAGDGTELRRMLLDMGVKLGVTQTARTQIANYIQMARPDERVRCVPRVGWHHGAFVLPDRVIGTGKEALIYQADTPIQSQFKERSTLDDWRRDVAAYCVGNSRLLFCVATAFAGPLLHFSGLQSGGFHLLGTTSKGKSTGGVIAASVFGSPDYVRSWKATDNALEAVATQHSDALLILDEIGQVEPRLVGDVIYMLANESGKARASRNGSAKPVLTWRLLFLSNGEKSVSALMAEANKPMKGGIEVRLPAIPAEVGDMGVVEELHGFPTPAALIEHLERHAGKHYGTAGPAFIEFASAQADELAEHLRTRVDELVTEWVPEGAHSQVARVAKRFCLVAVAGELATAHGLTGWPEGASVKAARRCFEGWMELRGGAGNSDEAEAVRQVLHFLVAHGDNRFVWMNRAQDDHRPNVPHRAGFKQHVKRDERRTAIASDREYYAEFGGKMGADDAEHVETEYLIEAAVFRKDVCAGFDHKMVAKALMKRGVLMPRSDGYPYRQEYIPGHGKFMVYRVRPSIFTLEL
1576269..1576448                   hypothetical protein; BTRA_4680                                                      N/A                 MCCLRLQASVAQKLRGKKLHYARNADDVHEGDVSFTAFNLAQVRAVNLYEIGQHLLRHR
1577307..1577540                   hypothetical protein; BTRA_4681                                                      N/A                 MSADDVEHVETESLIEVVVLRRDVRAGFGHKIVVKALTKRCVLMSRSDGYPYRQKYIRRHGKFMVCRVRPSIFTLEL
1578199..1578210                   attR                                                                                 N/A                 TTGTCTCCAAAT
complement(1578622..1579761)       PROPHAGE_Escher_CFT073: P4 family integrase; BTRA_4682; phage(gi26248244)            1.13e-107           MLVKPNGLKYWQFRYMKPDGREGLIQIGPYPRITLEAARAARNEHRVAVQGGDDPATLRKQEKARRKIDAARALNFKQCATAFIEARSAEWVNPKHTQQWTNTLSTYAYPIIGALRPADIDTDLVRKVLEPIWLTKNETASRVRGRIESVLDWAKVRGLRDGENPARWSGHLDQLLAAPGKVQKPKHHAALPFTEIGAFVAELRGMVGTAARALEFTILTAMRTGEVIGARHDEFDADAQLWTVPAERMKAKRAHRVPLSSSALELLKTLPTSADSPVVFEGMRARRPLSNMAMLQVLERMKRGALTVHGFRSTFRDWAAECTPFSNEVVEMALAHAIRDKTEAAYRRGDLFDKRRTLMQAWADHIENEVKAATTKAAA
1579867..1579878                   attR                                                                                 N/A                 AAAAAGTACCCG

#### region 2 ####
complement(2748058..2749098)       PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; BTRA_5672; phage(gi16130960)     4.57e-133           MLVLGIESSCDETGLALYDTGRGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLLEEVLAAGGARREDIDAIAFTQGPGLAGALLVGASIANALAFAWDKPTIGIHHLEGHLLSPLLVAEPPPFPFVALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLLGLGYPGGPEVSKLAEAGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKLEAAHASGAELDRAKADLARGFVDAAVDVLVAKSLAALKKTRLKRLVVAGGVGANRQLRAALSAAAGKRGFDVHYPDLALCTDNGAMIALAGALRLARWPSQASRDYAFTVKPRWDLASLAR
2749229..2750452                   flavo, HI0933 family protein; BTRA_5673                                              N/A                 MEKFDIAVIGAGAAGMMTAAVAGQLGRRVVLLDHSPRLAEKIRISGGGRCNFTNLYAGPDNYLSANPHFCRSALARYTPRDFLGLLKNYRVTWHEKHKGQLFCDHSSDAIIDVLKSECDAGGVAWRRPVTVDAVRHAQADGFALDTSAGAIGARALVVATGGLSIPKIGATDFAYRIAKQFGHKLVDTRPALVPLTFSADAWAPFAALSGVSLEARVFTGSRQGGGEFVEDILLTHRGLSGPGILQISSYWRSGEPIHVDLVPQLDAANELIRAKAGSRRQIGTLLAEWVPARLAHAWLEAERVRADARLADLPDKTLRRIGETLSRWTLTPSGTEGYRKAEVTKGGVDTRELSSATMMSERVPGLFFVGEAVDVTGWLGGYNFQWAWASGVAAGRAAADSARRLTS
2750532..2750744                   PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; BTRA_5674; phage(gi460042545)     1.93e-05            MTIIRVKENEPFEVAMRRFKRTIEKNGLLTELRAREFYEKPTAERKRKKAAAVKRHYKRIRGQMLPKKLY
2750911..2751357                   PHAGE_Bacill_G_NC_023719: gp509; BTRA_5675; phage(gi593777964)                       8.14e-17            MSLRDQISEDMKAAMRAKESERLATIRLLLAAIKQREVDERVTLDDAGVTAVVDKMIKQRRDSISQFEAAGRADLVEKEQAEVAVLTAYMPAQLSEAEIAAEVQAAVAQTGAAGPQDMGKVMGVLKGKLAGRADMTAVSALVKAALSK
2751454..2753331                   PHAGE_Helico_phiHP33_NC_016568: DNA primase; BTRA_5676; phage(gi371671350)           5.08e-55            MIPHSFLQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFGCGAHGTAIGFLMEHAGLTFPEAVQELAQSVGLTVPHEPSPMRGAGGGSGEGYAPPAASKSVTTALSDVMQTACDYYRKQLRGAPNAIQYLKRRGLTGEIALRFGLGYAPDGWQNLEAAFDDYRHDSLVDAGLVIVSDKTDANGAARRYDRFRERIMFPIRNVKGQVIGFGGRVLDGGEPKYLNSPETPLFNKGSELYGLFEARLAIREHKYALVVEGYMDVVALAQLGFPNAVATLGTACTPVHVQKLLRQTDTVVFSFDGDAAGRRAARRALEACLPHAADNRTIRFLFLPPEHDPDSYVREFGTDAFSEQVKRAMPLSQFLLNEATAGKELDQPEGRAKALFDAKPLLQALPANALRAQIMHMFADRLQIPFDEVAALAEVDARIAAPARQAPARSERRRVTDSEKRALRNLVMHPRIAAVLDDESAATLRALPRIGELFDEVIGHALALGEGAEFRLLSDVLRNSANAPTYDEIFREILVYDENVRDLMQQNPESDAAQEGLRERERIAGEELQAAVLKMRYDACCDRLNSLSKRSAPSSEELAEIKDLHQNLADMKRRLGL
2753775..2755817                   PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; BTRA_5677; phage(gi331028036)     4.15e-37            MTKKLNEVSVDDDANQSDEQPTAASGKGEKAKARDRRAKEKALLKEAFATSTPGTAEELEERRTKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDAETLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEDGLRHMVMAISACPTTIADILAMAERVANEEIRVDELVDGLIDPNAADTDGFSEKDAEEIENEDEEAEEDDEEEEEDDDGAAQATANAAQLEALKRASLEKFALISEWFDKMRRAFEKEGYKSKSYLKAQETIQNELMSIRFTARTVERLCDTLRAQVDEVRQVERQILHIVVDKCGMPRSEFIARFPGSETDLDWAEKVAAEGHSYGAILSRNIPAIREQQQRLLDLQARVVLPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAPADAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSDKLKSFLEGN
2755942..2756017                   tRNA                                                                                 N/A                 GGGCCTGTAGCTCAGGGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCGGGTTCGAAACCCGCCGGGCCCACCA
2756094..2756279                   PROPHAGE_Escher_CFT073: transposase; BTRA_5679; phage(gi26246249)                    1.12e-09            MQLRKIVKNRGHFPSDEAASKLLYLALRNIEKDWKMPPITWRQAVNQFAILFGERFTSAIN
complement(2756326..2757543)       PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; BTRA_5680; phage(gi100032)      5.87e-06            MKQNKNLGLEGLRGLACMAVMIGHFFYIFSPYLASLFRPVPFLIQPSALERWISIPPLTLAYSADAAVCVFFVISGYVLTTKFFTTEELPALQSAAAKRYIRLGLPSFASIFLAWILWRSGAIYTAHASEIGVAGWVSSWYAGPFTFSDVFTDGLAGAPLFSRTALNPALWTIQVELIGSIVLFAIIALFGKRPILLVLWFLFFANIFGLQSPNALFYLSFLAGAILNIVRPWLIRNQVASLVTVSLGIFGVSYNQQPMFDILRMIPLPNLKPLGPNFNDNPDLLWHTVGSILLVAGVIGSRRLSAIIGSRIPVFLGKISFSIYVIHVPVLASVGLRVAAAAQISGLRYEQSVALAFVAYVMAVIGGAILFERWIDAPSIRLANRMANRAASVEKLQGQSIAPWH
