gi|00000000|ref|CP004392.1|  Pasteurella multocida OH1905, complete genome. 2271688, gc%: 40.45%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
221808..221822                     attL                                                                                 N/A                 TAGTAACTACGGCAA
221863..223074                     PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; I927_00995; phage(gi16130540)     2.35e-105           MARTTKPLTNTEVDKAKARYKPYTLTDGNGLFLLIMPSGVKTWQFNYYRPITKKRAKFSLGAYPNLTIAQARAKREEYRALLAQGIDPQLHKQEQELKQQAENTNTLLNIAHRWKEKRSKEVEPLTMEKNWKRLENHLFPILGHYPIDQITSPILIDAVKPLNEQGFNDTLHRIINLTNQILNYAVTIGLLPFNSCVKASDAYHKEEQTNHPAISYKELATLLKDFQESNRDYLTKVLFRWQLLSMVRPAEAVSVEWSEIDFDKKLWVIPAIKMKKTRQGQFDHTVPLSSQMIAILKELKPITGECKYVFPHYSLPNRSMSKETITKALRDIGYQGKQDSHGLRSIGRTYLEDQNVDFRLAETCLAHRVGDKTSRAYNRAKYIELRRPVMQLWGDYVEKCSPK
complement(223248..225020)         PHAGE_Entero_P4_NC_001609: DNA primase; I927_01000; phage(gi9627512)                 2.33e-84            MSKLINAPHLKEQPNDFMSDLIVLAGGSAWSAWNKGKGTEWLLLCQALQHDSKQKPVILGETQLKEINQVRIALADQQSIKFIQFGELSQAEITALCLNIAKNTKAKVILLCDMLGQTVENLSQYIERLRNDSATAEIISKATEKAPKTKESDRTNAKARAFSQWLGLDLALQRGSREIYHYDNQAWHKLELEDIEEKAVQFFDENELGYSDRTINSLLNTLKAQLPRMGDQANEFIAFNNGVLNRNTLAFEPHDRNHWLTSYIPHDYDEHAQNTPHFDDWLSFVANGCEKKQRNILAALYAILTNRYNWQLFFELTGKGGSGKSVFAHIATLLAGEQNTISAKLEDFDNAKDLEGFENKTLILCPEQSKYAGEGGGLKAISGGDLLRVNPKHKKPFFTKITALIMLINNEPCRFTERAGGVDRRRVIFDFQRVVPDEKKDPDFIHKVTLEAGGIIRKVLNTFTQPEEAKKALNEQMKSEEALSVKMESDVLTAFFNYFFTSRTLDGLYIGSRTMGDNRIQTHLYPAYVAYAAAYNLKELGLVTFIAGIEQAIKQHNNEYPFIKEKKRDGVRTNIHFKDFNDFFTDVIKR
complement(225004..225423)         hypothetical protein; I927_01005                                                     N/A                 MALDKPMDYSKCNAIEIKAISIATQKVGLEYPYFGEALNVLAEEFSKFPLESLNGLKILHDELGTINKHLLEMAPKPPSLIPEEMVKVLTHDEIIDGLLKHGVIHSLVNTFSYFQENISMRIAELENGISKEGVNEQIN
complement(225423..225614)         hypothetical protein; I927_01010                                                     N/A                 MIKEPYELTAYNSQGQRVLVNYYSNYKKANAAMQKLISAQFSFNDISEIRINYINGKALGGLK
complement(225611..225853)         hypothetical protein; I927_01015                                                     N/A                 MCKEQTRPQFKIKGDVKDFDYQNDMLGTIIALLDVLEQADFNQLKEQTANEAFKGINHLVKEISNIQFDWVIAGVEEVTK
complement(225875..226096)         hypothetical protein; I927_01020                                                     N/A                 MRKYSVITYREDETVEGQPFIIATGKTHQEAVQIAREAMDNDPLVYGAVLRKCDHYNYSLKDNTHLVKKLTKV
complement(226089..226304)         hypothetical protein; I927_01025                                                     N/A                 MRKAKTVKPFKPEYQPTFEQLAKAVEKTEFYLNFAKDYIRNGHFKGTTDALKAIKKEVTQGLKENKGGKHA
226715..226894                     PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; I927_01030; phage(gi157166037)     4.79e-07            MATGNKNNKSLKKGIRFPHELIQQIDRAVEVESTKGEKTNFSSWVIDACKAKLEKSNNE
complement(227054..227377)         hypothetical protein; I927_01035                                                     N/A                 MIIEERLIEEVNQHPLIITQKLVYPNFEMSYDEESDVFYLKFNLDKNKLFCDEYGIDCLDLLLTILAFKQSTCDVPLLVTKQDLDLIYSLEIKNPIINLDDSNITLQ
complement(227374..227721)         hypothetical protein; I927_01040                                                     N/A                 MTRLMAVLSALVRNPHLGISEKESYFEVHFLNARNEVSELERTLDMKLERVREESAAGSHYTRYLPKDADQIRKLAGLYNLKLKFQQEKYKRYLDEPLFSDDDIQRAINLLGETK
complement(227721..227927)         PHAGE_Stenot_S1_NC_011589: putative repressor protein; I927_01045; phage(gi213163928)     4.40e-05            MSEAQTLFQKLIPGKEVTKIVGFGRTKLNSLVKAGKFPQPIRFSDNFIRWDLEEVNAWIEQQKAMRGA
complement(228070..228909)         hypothetical protein; I927_01050                                                     N/A                 MTRQKLLPKKTYSLEKAAEYISINYGLKVDKYDLFQHIQDGQLTASIYIEGSKKSLKTITGKSVSFEIFDEKSYIKVLDASKLIAITEHCFGNNALDPTNNFSFSVCMYSFCRKSTNIFFKECCTAVFSGYFNIPIFYLKNSKCIFNCGYSDLYSDNADLLLNIGFFHDEFEIDMNDIYILHSNLIKFLNSFDLINTSDITNCTAQLLKEMEEKNRDVSGKSLTSYLNIIQALKDELIEKGKFENQTEIIELLSCKYQGYIGLTESNLRDKFAKANNIK
complement(229239..229697)         PHAGE_Entero_HK542_NC_019769: hypothetical protein; I927_01055; phage(gi428783353)     9.89e-07            MIKMLGLDKALKDMDKLEKKFTKQLKKPMRIALNAGAKSLKETIKPLVPVMNVSTNFRQKGTVKNNIRSKTRIAKNAKSGYTVVGVMRPKGQRMARIGENTRDKRDPFYWWMVEFGTKKMTGRHYMEKGGNKGIEKATRVVEERFIQELKKL
complement(229694..231361)         PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; I927_01060; phage(gi100002)     2.67e-97            MSIWHDYAEKVKSGEIIACKKVKLAVERYFQDLTNPDYYFDEKIVNQFLAFSRLCPHVKGHLRGKPIILSDWQVFLFANILGFKHTDTGLRKYRSAYIQVARKNAKSTVAAVLANWFLVMEKGQQDIYTAAVSRDQARIVFDDARQMCLLSPPLRKRVQVQQHKLIYPQNNSLMRPLAAKSSTIEGTNPSLAIVDEYHLHADNSVYSALELGQGARPEGLLFAITTAGSNTISACKQHYDYCSQILEGNEKNDSIFILIFELDDESEIDNPDTWIKANPNINQSIPLIDFENTIKKARGIPSEWVEMLTKRFNVWCQGTTPWLSEGSWALCKRDYKESSLLHQDCYMGLDLSSTNDLTSICYTFPQGQKVRLITRHYLPEYQLNNVANKNRAIYRQWVRQGWLHITEGDCIDYDKIRDDILKDAERFNIKMIGFDVWNATHLRTQLQSAGLEVEPFPQTYQRFSPVAKSAEVLINRQVIEHNGDPVLAWALSNVVMETDANANIKPNKKKAANKIDPAIAFLMSFGTYQLEYGDLIFELSEEHQRVLEEFNGVEL
complement(231361..231729)         PHAGE_Psychr_Psymv2_NC_023734: terminase small subunit; I927_01065; phage(gi593779760)     1.21e-15            MTRKKTYKTPDFLDDIAKSQWKARIKQLSERGDIMPEDLTNLEIYCENYAIWRHSVADLAKNGFVIINSQGTQSRNPALSAKADAEKVMIKMSTLLGFDPVSRKKNPVTIEGMDAIDELLTL
complement(231889..232245)         PHAGE_Bacill_phi105_NC_004167: hypothetical protein; I927_01070; phage(gi22855043)     1.93e-23            MPYQPLKRCTFPGCRNKVKSGRCEEHKPKDNRISASKRGYDHNWSKYRLQYLKQHPLCVMCLAKGIYTPATVIDHIKPVENGQADPLFWIESNHQALCRDCHSYKTRVIDKRGYGAKK
complement(232254..232577)         PHAGE_Shigel_SfII_NC_021857: head-tail connector protein; I927_01075; phage(gi526244642)     7.89e-11            MDVNNLISLEEIKAQLNLMDDFDLDDDLLRSYALTALEVAQRHIGKTFGDEATETTIPFNTSIKVGCLMYIAYLYANREAVTDVANLNPAPMTIKSLWDVYREPCVY
complement(232567..232908)         PHAGE_Paenib_Harrison_NC_028746: head-tail adaptor protein; I927_01080; phage(gi971482318)     1.71e-16            MARMIRAGRYNKVITLQVQKQIPTDYGGFNLKWVDFKTIRASIEPLQGREFFSAAQQQNETQLRIRIHYIPDVLPTMRIKYGDRLFAIVAAIDSKESHRELQLLCKEGVTDGR
complement(232892..234103)         PHAGE_Yersin_PY54_NC_005069: portal protein; I927_01085; phage(gi33770511)           2.88e-61            MWPFKKKTEQRNSLTIEELLSYMGVANTGAGEFVTPTTAESLPAVMNAVTVIAEAVAAMPCYLYQLKQDGRERVFDHPVDFLLNEMPNRSQTPYQFKYTMMRHCLLTGNAYAVIEWDKIGQPVSITPYQPSAVNIFINPKGDYIYQITDLNSKVKNYLQDEILHLRHSSLDGFMGRSPIAICRETVGLGIAQQKHGAAVMKNGLMASGLITTSEWLDEAKAQKAIKALERYKGAKNAGKTPVLEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSTYSNFSEASRAFLSQTLRPWLTNFEQQLKDALMVDVTRQSKQRYLIEFDTSDLLRTSQNDRFNSYDTAIKAGIMNPNEVRRREGLAPYVGGEEFSQAWKQTVEVKKGGGNGEND
complement(234105..234665)         PHAGE_Entero_vB_IME196_NC_028990: head maturation protease; I927_01090; phage(gi971763614)     4.96e-31            MNKDFEIRTSELSAENEKLIGYVVKWNSPSELMWGEFVEQFAQGAFSETLLSGADVRALFEHDHTKLLGRTQANTLKLEEDSIGLRFELTPPETSLGKDLLVSVKRGDITGMSFGFRAKAENWNFELTPCQRIVTNAELVEITVTSIPAYPESNVQIAQRSMAQAKAKLQPKTTALLNRWTELAEL
236283..236297                     attR                                                                                 N/A                 TAGTAACTACGGCAA
complement(236356..236457)         hypothetical protein; I927_01105                                                     N/A                 MFWKDLSVIYGFLIDFIGDFGLFWIGLESEMVH
236654..236773                     hypothetical protein; I927_01110                                                     N/A                 MSWDYESVLAIAAYYKEKGIKVFKHFVMDIIKKKPLTKK
complement(236802..237011)         PHAGE_Lactoc_bIL312_NC_002671: Csp; I927_01115; phage(gi13095918)                    3.36e-20            MSKLNGTVKWFNSDKGFGFITPADGGKDLFVHFSGIIGSNYRTLNEGDRVEYSVQDSQRGPSAIDVKAI

#### region 2 ####
complement(1708432..1708896)       PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; I927_07875; phage(gi16130540)     3.86e-36            MARTTKQLNNTAVEKAKAKDKPYTLTDGNGLFLLIMPSGSKTWQFNYYRPITKKRAKFSLGAYPNLTIAQARAKREEYRSLLAQGIDTQEHKEQEQKAAISKIENSLLFIAERWKAKKAQEVDALTLKKNWRRMDMYLFSFIGDISVRFSPLQQ
1709170..1709183                   attL                                                                                 N/A                 TGTGTTACTAAAAA
complement(1709375..1710292)       PHAGE_Burkho_BcepMu_NC_005882: gp34; I927_07880; phage(gi48696944)                   8.61e-84            MSLADKRIQDPVLTQLALGYHNAELVGDYLFPIVEIPKEAGKIPQFGRLAFRQQSTVREVLGKSNRLTPEDITSVSIELEENDLEYPIDYRENHEASYPLKQYALSVVQDSLALGREITAAKIAQNSDNYPSENVSSLAGKNKFSHKESNPLETFDNAISVISASIGKKPNVCVISEDVWKALKNNPSILERIKYTKTGILTPSVFAELIDVPNVKIAAASEEKSGELHKIWKNCVILAYVSTRSKGQGTIFDPSYGYTVRRKQGLFVDTYHESGGKIELIRCTDISKPYLVGKSAGFLMKDCIE
complement(1710292..1710732)       PHAGE_Burkho_BcepMu_NC_005882: gp33; I927_07885; phage(gi48696943)                   6.27e-13            MENEELERLQTENERLKQQLKQDEKAKNEEYANELVKKGILMPANKSQAVELLNYACDYDNGDVLNFNEGENLLEKLKAFLNSQPTRIHLNRELSADDGMGLTDIPQYAENTPKDVIALDKRIREYMHANNVDYKTAFNQIHSGGK
complement(1710744..1711319)       PHAGE_Burkho_BcepMu_NC_005882: gp32; I927_07890; phage(gi48696942)                   1.12e-16            MKTAIFEIFRTGKHNGSGENAKMQWTEKHLAQIGQFYSEDVKSAPLVIGHPDNDEPKLGKVKRLIHHEGALFAEAQLNDDLIQKIKNGAFSGISASFYPPTYAQNPIKDLGFYLRHVGFLEKGKQNPAVIGMLDPKASVEYLSYSEMKEDLILFCEDESTLSYAEQIHQKALYFSNVLSVNYERALQLINP
complement(1711316..1711651)       PHAGE_Burkho_BcepMu_NC_005882: gp01; I927_07895; phage(gi48696911)                   3.46e-13            MSKSMKIARHELLQDIEVHISLICKEFNLADDVCEQIGTSIADFIADNYGGQVISFPKNFKWRTDSRTMQIYKKFNGTNIRELAKEFGITESGIRKAINRARKNLETKVKA
complement(1712046..1713839)       PHAGE_Entero_P4_NC_001609: DNA primase; I927_07900; phage(gi9627512)                 4.86e-68            MKTKLKNAPHLAEQPLAPFEDMLILAGSSSWQAWNKGKNEEWYLLCQALRHSATQKPVILGESQLKEIQALKLAEEEQQFIKIAIFGKLSEQYKTAICLNLAKNTQARTVQFINNIGELVEDVSGYIQRLREDESTAQQAEKIAPKAKIQLDFETEKPTQPEIAEAFLSWIDKPIRQDADIGKTFEYNGLYWQILPDHALMQKVMAFYDKQNYRKYTARSLKSMAELIGIMAEKIPHANQDLIGFQNGVLNKKTGEFLTHNINHYLRSVENFNCTTQNKSTPYFDDWIDFVSNGNQNKRNAILAGLYMVLTNRHEWGLFLEATGIAGAGKSVFSQIASIINGGSNTAYISLQELEIDRKRAMLIGKSLAISPDQKPYKGSADELKAITGGDSVTVKLVYVDDFAVKLNPVFMLVTNYPLLFTDRNGGIARRRIIIPFDRAIPKEKKDVHFIDKVQTEVYGIVNKLLALFPNPDDARLILEEYKDLDEGKNIKREANHLIDFLGHFELRENALGALRLGSARNNSVNGLDFTLYSAYCFYCECHSINPLNLFSFKNSLPDAFKESGQKIDFNVTLNKGYPRTNAFWKDKENTLKNWNG
complement(1713829..1714017)       hypothetical protein; I927_07905                                                     N/A                 MNLSSFILREMKVNYTVIKKRQGKEIILVTTNNKDKAFNVAYGLIECNEQITIKATRGHNEN
complement(1714017..1714310)       hypothetical protein; I927_07910                                                     N/A                 MRKNNHFQAVFKNAPDLAYQVTSGIEHLKCVPVLLTGLYCLSQTYKGEHIKDDIIESLESFAEMQKVFINQLSENTSLLHDIVDELNDVFAKTEEVE
complement(1714303..1714953)       hypothetical protein; I927_07915                                                     N/A                 MKGKISGAFQCANIGNAPYHHLSRQAKTMIEMILTKITKKDFTKCGHFWHDLTVSAKSLTEPENSNYLLMANSGTPFNRAFFVRSLRTPQERPEPLEGLERHSMVACSGKGFALCCVPLVAVSQPVARYRPKPENFQAVTSLKFLLMGLIAMIYQFLGVSRQHYDRTKAEQIRIQADNEQQARAYLARNYVLILLGRLPNSAKNDRTLVIQGGIYA
complement(1714950..1715141)       excisionase family DNA binding domain-containing protein; I927_07920                 N/A                 MNQQHTPTTDKHYTVREMFELYGVSRSKLDRLAREGKIKKTKFGSSTLFSAQEVQRYLASVNQ
complement(1715665..1716900)       PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; I927_07925; phage(gi16130540)     3.53e-98            MPRIAKSLTNTEIDRAKIKDKEYNLADGKGLYLRIKSTGTKVWIFNYYHPITQKRTNYNIGHYPAISLAQARTKRGEYQALLAQGIDPQEHAKAEQQAQQLQLENTFYKWAERWKENKQKKVLASTIQKDWRRLEMYILESLGQMPIDKILPPVLIETLKPLEAMKDRRTGTADSDTLKRVIRLTNEILTYAMNAGALPFNPCLSVKDIYNFAQPESHPHVEPEELPQLLTDIDNSKAQPRTRDLILFQLLTMVRPAEASSAEWAEFDLTERVWTIPARKMKMRYPHKVPLSNQVIELLQRLQMQTGHRQFVFLSRNKTNEPMSPQTVNKAFVDMGYKGKQDAHGLRSIGRTYLGNKRIDFEVAEMCLSHKKGDSTSKAYDKADFFEQRIPAMQLWADFVQESAQSTSLFK
1716957..1716970                   attR                                                                                 N/A                 TGTGTTACTAAAAA
