gi|00000000|ref|CP005076.1|  Spiroplasma diminutum CUAS-1, complete genome. 945296, gc%: 25.46%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1466..2590                         PHAGE_Rhizob_16_3_NC_011103: p081; SDIMI_v3c00020; phage(gi195546611)                4.52e-17            MFFSVNRLVLIDEINKCNRIIDPKIPTPSLSGILLEVEADKISLVSSNSSVSIKTVIDMGKSDLQIKETGNILIRGKYFLEILKRMDDDIINISSVENNLVSLSGEKSEFSLNILDFSDYPSIGFREKGDTVTVNNIDLKKSLNQTIVSVNEWNQKIVLAGLNFSLDNSMFYITGTDGFRVSRKRTNVLNEIPEKFETNIPHKSILELIKLLPEKGECKIVSIDSHVTFIINNTIFQTTILEGQFPNVNAVFPTDFNTTLYMDNKKFFKLISRADIPSEDNASTVVNLILNNDSIFIKSNIHQIGSFEEVFKEFELKGLDEQNICFNSKYLIDSLKTFETKNIEINLIDSKKPIVISSSEDMNLSQIILPMFSN
2656..4560                         PHAGE_Bacill_G_NC_023719: gp252; SDIMI_v3c00030; phage(gi593777708)                  1.84e-171           MENNKYGASQIQVLEGLEAVRKRPGMYIGNTNKVGLHHMIWEILDNSVDEALAGFCDEISIFITDENEIIIKDNGRGIPVDIHPKTKKTTLETIFTVLHAGGKFDESTYKVSGGLHGVGASVVNALSLYVEAMISRDGKIYQQKFYDGGTKATEIKEIGISDSNGSIIRFKPDPEIFKETTEFDFKIIQNKIRQLAFLNKKLKLNLYDQRNDKFLTYVFEDGIKDYIKEINSGKEKVHDEIFYVSNNLNDIEVEISIQYNETYDENVFSFCNNIFTSEGGSHEEGFKTALLKSINSYTNDLKNFKGNKFTWDDLKEGIVSVISIKHRDPLYEGQTKAKLSNLDAKESVAEILNEGFKEFLLKNPNDAKKIIEKILISQKARKAAQRAREDTRRKSAIDNFSLPGKLADCESKNIDECELYLVEGDSAGGSAKTGRNRKTQAILSLRGKVLNVEKVKQSKVFDNNEIQSIIAAVGVGVKNDINLKKLRYGKIIIMTDADVDGAHIRVLLLTFFYRYMKDLILNGNVYIAQPPLYKIDAGKNNVDYAYNDLELEQLKESKYNELKYTIQRYKGLGEMDPIQLWETTMDPERRTMIQIKVEDAFLANEVFSSLMGENVDLRKQFITENAQFVENIDI
4580..7012                         PHAGE_Bacill_AR9_NC_031039: hypothetical protein; SDIMI_v3c00040; phage(gi100044)     1.69e-113           MNDIKHGRILEIDIKNEVEKDFLEYSMSVIVSRALPDLKDGLKPVHRRIIYAMNDLKITSDTPHKKSARIVGEVIGKYHPHGDSSVYEAMVRMSQDFSYRYPLVEGHGNFGSIDGDGAAAMRYTEARLSKITSVLLKDIDMDTVPFIDNYDASEKEPKYLTGYFPNLLVNGATGIAVGMATNIPPHNLREIIGAIVAYIKNDQITIDEILTYIKGPDFPTGALMTNGKSMIDGYKTGKGNLIIRSKIDIEDTGKHQRIVISEIPYQTNKLKIVEKIAELYKNKIIGGISDIRDESNYEGIRIVVELSKNSNPQLIIKKLYKYTNLQSSFAINMLSLNNGIPVVLNIRDIIKFYVKHQIEMILKRSVFERNKLNSRLHILNAIRVTLDHIDEIIKIIKESKTTEIANEKLFEAFGFDDKQSKAILDMRLQRLVGLEREKVELDIKNIEIRISELDEILASKDRQNNLLIEQLEDIAKKFGDDRRTKIIEEDETQIDEEELIQDSQMLITLSGEGYIRRLSNEEFKTQKRGGKGVIINSNQDDNIVIAKVGKTKDDVLFFSDEGKVYRIKAYNITQFSRNARGVPIINFIGINSSEKITSILSLKDKKNIYKYLLFITQNGVVKKVEIEEFNRINNFGKIAINLDEGDKLVSVIPTVGESEILIASQNGKIIKVNENDFRPMSRSSRGVKGMGLDKNDVVVSSCSSYKNECVVTISDKGIVKKTLISEYNIFGRGAKGVVGMKLSDKTGKFKSVLPIRETDEILMISSKGKAIKIGAQDINLQSRNSTGVIGFNLDEDEYITAATLEWNKGE
7015..8280                         PHAGE_Bacill_G_NC_023719: gp287; SDIMI_v3c00050; phage(gi593777743)                  2.50e-11            MLDINKIEIDFDKVYSNLKKRNKDFKNELDEVVKLNSQRKKITFEVEELKSEKNKMSKEIGNLARENKQEEIEKIKNSVSKINLKIEELDIELKTINDELNLKLSYIPNIPNENIPLGIDDNDNIEIKKWGSENLKNNGEAHWEIASKLKLVDFELGSKLSGSRFVVYTNKGAKMIRALTDILITRHTNNGYKEMWLPLIVNKENMYGTGQLPKFEEDAYKLDNQYLIPTSEVPLTNTVRDKILDKSELPIYLTAFTQCFRREAGSAGRDTKGLIRLHQFNKVEMVKITDSESSYEELEKMLLDAEHCLQLFNLPYRVVELCGGDIGFSSAKTYDLEVWFPNQNKYREISSCSNCLDFQAKRIMTRYKNEHGKNEYVHTLNGSGLAIDRLFAAIMENYYDGEKLILPEILKPYFENQDFLK
8490..8915                         PHAGE_Acinet_vB_AbaM_Acibel004_NC_025462: putative deoxycitidylate deaminase; SDIMI_v3c00060; phage(gi712915758)     9.66e-06            MEDIYSTLLNELGKCEKSKDVPVSALLLNTKNEIVAKSFNSRQKKYSFTNHAEVCVLNKIYKKRKTKNLSDYILITTLKPCLMCITIIEQANIKEVRYFLENFKCNYNRIETKINFEKIGSQEQCNELEKYLKEFFLELRK
8951..10870                        PHAGE_Strept_Dp_1_NC_015274: DnaX DNA polymerase III clamp loader complex gamma-tau-delta subunit; SDIMI_v3c00070; phage(gi327198331)     8.40e-43            MENKKSLYREYRPKNFDQVAGHEGIKEILISQIKTNSFGHALLFSGQRGTGKTSIAKIFAKVVNCQNLDGYNPCDECLSCKEFNSNSHSDIFEIDAASNNGVEEIRNIKSNISLLPSFSKYKVYIIDEVHMLSNSAFNALLKTLEEPPKHVLFVLATTEFSKIPATIISRCQLFNFKRIAQISLENKVNEICEKEGKKITQDALNEIYYMSDGSLRDALNYLEQSITISTEEVNIEILKKIFYIATKNEKIEIIRNVIEGKTKEIISYFEKANNQGIDFQTMTLSLLNILKEIIEVKLTEDINFLVNINENDYEFFKNIDIKIFFDLSDNIADSYTKSKNSNISFQYILINILKTVANKQLISVLKSNELNDNFSIIHENNLEISKVKIVGPEIVEPEIVEPEIVEPEIVEPEIVEPEIVEPEIVEEQNIERNNEEKPKLENEINDFFISEDESKFLKLQMKLLISESNYYKNIIDFTNDQIINVLVGANKESRGYYEEKFNNIFSPESINNNSEYIQNFIMFYGTKITAASADSLIIVSEERTISKWINNKLQNEKNRKLVFSYFKREVKIICLDKKRWAEIKIDFMDRKNNNKLNNYSTVSTEEFYSNLTLNIDEEENEYLKRAKELLGNQNIKVVD
10870..11436                       recombination protein RecR; SDIMI_v3c00080                                           N/A                 MDKIVEELKKIDGVTKKSAEKIIFDLIINKDKIDILENILKDIKNIFNECETCFYFKENNLCTFCDNENRNRNIICVVSTKMDAIKIAESNYNGMIHVLNGEINLNKNIGPEKLKMTELFVRINKDIEMLLALNLTFEGEVTSNYIANKAKGICEKISRIARGIPLGGVLDYIDQETLNDAILNRKKL
11457..12086                       PHAGE_Pseudo_EL_NC_007623: putative thymidylate kinase; SDIMI_v3c00090; phage(gi82701134)     4.49e-33            MIFISLEGIDGSGKTTISKMIKDNLMQKGYNVLLTREPGGEPLAEEIRRIILDEKTKINPWAETLLYVAARKQHLDSIILPALKEGTIVICDRFMDSTSAYQGYARNIGMADVSELQNIVLGSTKPDLTIFFDITPKESQIRLMNRKRSADRMEQEDQKFHEAVYEGYQILISENSDRIKVVDSRKPISEVIQQVDFLIDNALNERTKK
12086..12832                       PHAGE_Strept_Dp_1_NC_015274: DnaX DNA polymerase III clamp loader complex gamma-tau-delta subunit; SDIMI_v3c00100; phage(gi327198331)     7.12e-06            MKKNEVFKNVNELIKENNLYHSIIISNDNQLQLEEISLEVIRQIYCFNNSIENDNCKWCLKVINKNNLNTFFLGDGISKINKEDIKSLIINFSSSGLEDNKNKVYVIANGENLSESASNAMLKFLEEPPKNTYAIILTNDRNQILSTIKSRCKLFSIENEIKIDNFDLDLFNIIRNKKREIVLEFLIQFKKRDKQEIIKTLSDTLQLCLELNFKKIPELILDSLSEIKNSNYISLILENLFIQIYEVI

#### region 2 ####
102796..103977                     PHAGE_Mycoba_MiaZeal_NC_028953: minor tail protein; SDIMI_v3c00980; phage(gi971759943)     9.88e-09            MNKFKNVENKILEIIEKNFFTGAVIQINQNKKTIFSYSYGINDIDKQTFMNEDLIFRGYSLTKTVTVASFLTLIDKKIISLDDKLSKFFPEFTEMKVLNKEGMQEINKSNNPILIKHLLTMTSGFTYFGNKNITQKETTKLLAKFVEKENDTYINYETFMKMLSNIPLEFEPGTNWRYGISLDVLAAVIEKVTKRKFSDFVKETIFEPLEMNDSDFYLKDKNREAKVYSWNLIEDKPTLTKVENFNFLFQEIDKIPQMPMGGAGIFTTVKDYSKFLDFLLDGKDSKGNQILSSHILNEMKSDQLKEIRKYFKWTLNDEYSYGYGVRVRMENTNYPLTEIGEFGWDGLLGSTGLADPKNKFTVCLMLSSKPGHNKLIESEFFDSLYKDLANYKY
104040..106211                     PHAGE_Bacill_0305phi8_36_NC_009760: PcrA helicase; SDIMI_v3c00990; phage(gi156564011)     1.89e-114           MLEELLKQLNDEQLESVITTDVPLRIIAGAGSGKTRVITTKVAYLIEKEKIVPSKILAVTFTNKAAQEMKNRVKKIIPNLDRNPLITTFHSFCVRVLREDCEYIGISKDFTIIDASDQGKIIRDIIKRLDIGNDKNKPEKKILSKISNWKSKQLSWEEAYEETFNIAEKKWAKAFRDYEQYLNEKNYLDFDDLILKVHKLFNDNLDVREKWKKRFDYIMVDEFQDTNYTQFDLIKWLTGSRNNLTVVGDPDQTIYSWRGAKVSIILNFKEQFKNSRTVMLTENYRSTKPILDIANEFIDNNKNREKKDIFTQKKDGEIVHVKEVASRNFEAKFVSKKIKELIEKGEYKYSDIYILYRTNAWSQEFEKEFQNQKIPFQLIGGFKFRDRKVIKDVTALLRAVVFKDDLSMERVFGFTPKVGAVTSSRIKQAAEEFDLNLFDFLTSQHTEVNAISKNLNYLIKCLTKSRLLFEENKSLLELTEFLVKESGYKDRLDLKDKEDIESLQNLEAYYDQMEKYDTYYNETENELNRAVTFLQEEALSSDEESNEEINKVTLLTIHSAKGLENKVVFIVGLNKDIFPSKMSFYSMESLEEERRAFYVAITRAQELLYISYVSGEYSYISSGELGASRFIQELNPELYDIEKNIYFHSNNETSSGYKGKPNLELKPQKLEAGVVKGNDIKHIIFGKGKVVRVIDKYISVAFVDPKQGVKMIPINSNTWEKVE
106300..106563                     PHAGE_Bacill_G_NC_023719: gp197; SDIMI_v3c01000; phage(gi593777654)                  9.60e-06            MTSFTATVIDPVGLHARPASVLTKEASKFASEIKIKCGDKEGNLKSIMNVMALAVKTGAEITIEANGEDENEAIEAIEKAMKDNSII
107091..108113                     PHAGE_Gordon_OneUp_NC_030917: hypothetical protein; SDIMI_v3c01010; phage(gi100122)     8.27e-130           MAKKKNQYYYDSLSPIEFAMNKFNGRMRSVNWNVMNDDKDLEVWNRATQNFWLPEKVPVSNDLVSWKTLTPEWQELITRTFTGLTLLDTIQATVGDVAQVPNSLTDHEQVIYTNFAFMVAVHARSYGTIFSTLCSSEQIEEAHEWVINCDSLQERAKALIPYYTGNDPLKSKVAAALMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNYYSGYKYQRKVEKLSPEKQAEMKKFVFDLLYELIDLENKFLYELYDGFGIAEDAVRFSLYNAGKFLQNLGYESPFTEEETRIEPEIFTQLSARADENHDFFSGNGSSYVMGVTEETSDEDWEF
108120..108578                     PHAGE_Bacill_SPG24_NC_030903: hypothetical protein; SDIMI_v3c01020; phage(gi100023)     1.26e-15            MHSDVIKISDKDIKKPKGKVFVVYFSSISNNTHRFMDKLDVSDARIPYELNQELIVDKEYVLITPTYAGGGGDTKGAVPAQVIKFLNNENNRHLCRGVIASGNTNFGDTFAIAGPIISKKLNVPLLYQFELLGTQNDVESIRKILEDFWGEK
108582..110747                     PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; SDIMI_v3c01030; phage(gi158079505)     0.0                 MNTDNIKSLSGTNESDEYIKLNARAKLFVPGQDNFKLDIEAAELYMKEHIEPNMMKFSSTKERIEYLVNNQYYDEEVISKYTMDQLDELTKYAYSFEFKFPSFMGALKFFNAYGLKTFDGKQYLENYEDRVVSNALFLAGGNFEKAKNILRQIILGRFQPATPTFLNAGKKQRGEYVSCYLLRVEDNMESIARAVTTSLQLSKRGGGVALCLTNLREFGAPIKNIENQATGVIPVMKILEDSFSYANQLGQRQGAGAVYLNVHHPDIMSFLDTKRENADEKIRIKSLSLGVVVPDITFELAKENKEMALFSPYDVEKVYNKAFSDISVTEEYENMLNNPKIKKTFINARKLFQAIAELHFESGYPYLLFDDTVNNSNAHPVAGRIVMSNLCSEIVQVSTPSEFNTDLSFSKTGEDICCNLGSMNIAKTMESGDEFSEVIYNSILALDHVSRNSDLSSAPSIENGNQNNHAVGLGAMNLHGFLATNHIYYNAPEAVDFTNMFFYTMAYHAFKASNKLAKEFGSFAGFKISKFADGSYFDKYTKCEESKWTPESDTVKGLFEKYGVSIPTQKDWIELSEEIKNTGLANSHLMAVAPTGSISYLSSCTPSLQPVVAPVEVRKEGKLGRVYVPAYKIDFDNMGYYSLGAYEVGPDPIIDIVAAAQQHVDQAISLTLFMTDQATTRDLNKAYIRAYTKGCASIYYVRVRQEVLEDSENYECDACVI
111075..111821                     PHAGE_Bacill_G_NC_023719: gp245; SDIMI_v3c01040; phage(gi593777701)                  2.12e-12            MIEIKNISRKMGNFGLDNVSFKIKNGSVVAFVGDNGAGKTTTIKAIFGELKLDSGEILIDGENLFKNNNLSKVAFFPDSNNVPLDIKVHEYLHYICAANNMNKERTDLSIDNVYRLLELRPYKDKKIKELSSGWKKKAIMASVLVRSPEYIIFDEPTANVDVESKMYFMDIFKLLSKVGITILITSHIIEELQELANYLVLIKKGQIVYSNDFDKTKEHIMDVYKKHMNEPIKDLHILSDLYNKKDKK
