gi|00000000|ref|CP005388.1|  Campylobacter jejuni subsp. jejuni CG8421, complete genome. 1636029, gc%: 30.51%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(183456..184175)         PHAGE_Bacill_CP_51_NC_025423: putative resistance protein; CJ8421_00940; phage(gi725949539)     1.19e-13            MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHRDKGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKSIKEIKEQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMIIAVIIAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTAMAFALVVQILNILDQRKEKNG
complement(184247..184813)         PHAGE_Prochl_P_SSM7_NC_015290: PRGA-formyltransferase; CJ8421_00945; phage(gi326784531)     6.12e-35            MLVKLAVLFSGNGSNLENILEKLHKKTIGENTYEVVLCICNKKDAFGVQRAKKFGLDTVIVDHKAYNTREEFDTILVQKIKESGANLTILAGFMRILSPVFTKNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDGGMIIAQKAFEKRNLSFEEFEEKIHSLEHEILPLSVIEIFS
complement(184804..186174)         putative kinase; CJ8421_00950                                                        N/A                 MKAIIDNIKILEQNAINKGLDELILMENAGLNLAKLIKKEAKKIRIQRKIRKVKILFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYAFKFCKKEPNFKKFHIIIDCILGTGSNRCLDEKTSLIIQKVNQSKALKIACDIPTNLGFYPCFKANITFCMGALKEILLEDFAKEFVGRIKIANLGIRSKKFYPNSQAFLLEKKDLKTIDRKINANKGNFGHIYIVANASAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKIENNASAIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDVVITPHPKEFIKLYKMCFDENLDIETLQKNRFFYARKFSQNYDCVLVLKGANPIIVQKEKLFVVNLGNQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLIKGLKCL
complement(186158..186856)         hypothetical protein; CJ8421_00955                                                   N/A                 MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQKNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSDYTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALINITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREKNIYFLVKKDYESYY
complement(186858..188363)         PROPHAGE_Escher_Sakai: putative ATP-dependent protease; CJ8421_00960; phage(gi15833954)     8.26e-87            MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASTAIKESVERIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGELGLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEFFKEKNYENFRFSHNHPLFANPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALGMHNILFEGSPGSGKSMCAKRLVYIMPPQSLNEILMQNAYMSLDSKDCEFTKIRAFRHPHHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDYKIHISRVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLYVAMDEISKDDKVSISSKEMSEKILQAFIFGKKRGQKEFNGKLKDEDLSRFCVLEKDAKDTLDLAISRYNLSLRSLNKILKVSRSIADLEQSLNINKTHILEALSFRARN
complement(188360..188887)         PHAGE_Synech_ACG_2014f_NC_026927: baseplate tail tube initiator; CJ8421_00965; phage(gi100217)     5.48e-15            MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGVGLAAIQVDIPLRVLLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDFFEEVKRYNHILLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKFDKEFKKKKKNHKKEK
complement(188923..189507)         PHAGE_Bacill_G_NC_023719: gp257; CJ8421_00970; phage(gi593777713)                    3.30e-58            MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK
complement(189507..190841)         trigger factor; CJ8421_00975                                                         N/A                 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALQELKKENKELVGEPYFEKFDRKDGEIIAELILSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKRALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKKQGALPAVKMALIEEKLFNDIFIPKTEKSEKVSKKEKEDK
190984..191556                     PHAGE_Strept_Dp_1_NC_015274: FolE; CJ8421_00980; phage(gi327198319)                  3.56e-50            MQKKFEDCVKTMLEIIGENPNREGLIKTPNRVFKAYEFLTSGYTQNVKEILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGVQKANSTTTTSALRGIFLKNEKTREEFFSLINSAKQVRF

#### region 2 ####
complement(1355180..1355854)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; CJ8421_07155; phage(gi100148)     1.76e-07            MQAIILCGGLGTRLKSVIKDIPKPMAPINDKPFLEFIFEYLKKQGIKEVILAVSYKYEVIKEYFKDEFLGIKIKYSIEKEPLGTGGAIKEALKIIKNETYVLNGDTFFGIDLSKLKLNGSKICLALKQMNDFDRYGTVNVNEQGFVISFEEKIFKNQGLINGGIYLLTKDIFNEFDLEKKFSFEEFLRENYEKLKAKAHIFDDYFIDIGVPEDYYNFTTNQSHF
complement(1355842..1356447)       PHAGE_Caulob_Cr30_NC_025422: phosphoheptose isomerase; CJ8421_07160; phage(gi725949171)     1.77e-20            MENLNSYIKEHFQESILVKEQILKDENLITLIKNASLEVIKAYKNGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYENLFARQVQAQGVKGDVFIGISTSGNSKNILKALELCKQKEIISIGLSGANGGAMNELCDYCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFSCKQ
complement(1356435..1357454)       PHAGE_Caulob_Cr30_NC_025422: D,D-heptose 7-phosphate kinase; CJ8421_07165; phage(gi725949173)     2.79e-22            MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIEREDGKIIFDSPDTNSYSEYESKEFLGNDGKLDIFKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLVVGVIKAFAEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQDQYAATFGGFNFMEFYDNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKMKEALFKADFDTLAQILGKSWQSKKIISEIVSNDELERIYHLAMQNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALSKEQGYVQDFSFTKEGVKSWRI
complement(1357529..1358467)       PHAGE_Synech_ACG_2014f_NC_026927: rIII lysis inhibition protein; CJ8421_07170; phage(gi100233)     9.06e-14            MSKKVLITGGAGYIGSVLTPILLEKGYEVCVIDNLMFDQISLLSCSHNKNFTFINGDAMDENLIRQEVAKADIIIPLAALVGAPLCKRNPKLAKMINYEAVKMISDFASPSQIFIYPNTNSGYGIGEKDAMCTEESPLRPISEYGIDKVHAEQYLLDKGNCVTFRLATVFGISPRMRLDLLVNDFTYRAYKDKFIVLFEEHFRRNYIHVRDVVKGFIHGIENYDKMKGQAYNMGLSSANLTKRQLAETIKKYVPDFYIHSASIGEDPDKRDYLVSNAKLEATGWKPDNTLEDGIEELLRAFKMMKVNRFANV
complement(1358491..1359525)       PHAGE_Synech_S_CAM7_NC_031927: hypothetical protein; CJ8421_07175; phage(gi100225)     2.47e-32            MKKTALITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKDGYDPVVHICSSSEVYGKAKAGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIEAGYQEPVIKVGNLSSVRTFQDCRDAIRAYYLLSLESEKGKVPCGEAFNIAGEEAFKLPEVIDILLNFSDMGGGIEVRQVEDRMRPIDADYQMFDNGKIKSFIDWKAEIPVRQMLKDLLNHWRNEIKRGRIPLNR
complement(1359534..1360592)       PHAGE_Synech_ACG_2014f_NC_026927: hypothetical protein; CJ8421_07180; phage(gi100224)     1.03e-81            MQKDSKIYIAGHSGLVGSAILNELKQQGYKNLVFKTHFELDLTNQKAVADFFEREKPEYVILAAAKAGGILANNTYRADFIYQNLMIECNVIHNAYLHKVKKLLFIASTTVYPKNATLPTSEEQMLSGDLEYTNKPYAIAKISGLMLCESYNLQYNTNFIAITPTNLYGNNDKFDLEKSHVLPGILRKMHLAKLLNEKRYEDLLNDLKFDSIEEAKNYLKKFGVDKDNVEIWGSGKPTREFLHSQDLANACLFIMNNIDFKDLKSDNTEIINTHLNIGPHKNITIKELAELIKNIVGFKGKLVFNLNRPDGAMQKFTDCSKIHSLGWKHKIELEDGIKMMYEWYLKEQNIRQ
complement(1361529..1362074)       PHAGE_Entero_phi92_NC_023693: Phi92_gp065; CJ8421_07195; phage(gi726646998)          2.91e-21            MAIEFNIQESKILKGVYIITPNKFRDLRGEIWTAFTSKAVDKLLPNGLKFIHDKFIHSKHNVIRGIHGDVKTYKLATCVYGEIHQVVVDCRKDSPTYLKYEKFIINQDNQQIILVPAGFGNAHYVTSESAVYYYKCAYKGDYVDAPDQFTYAWNDERIGIDWPTNSPILSERDILATKNKG

#### region 3 ####
complement(1588187..1588555)       PHAGE_Paenib_Vegas_NC_028767: antitoxin HicB; CJ8421_08400; phage(gi971741660)       7.51e-05            MKKDINYYLNLPYKINLVKLDDGDYFAQFDDKELNKLVLMAGDGKTPNEAIEDLKNAFACYLEEALAKNEFIPEPIQKDKSKNLAITLKNSLVDEIDFYSKKMGLSRSAFLAVSAKAYIKTL
complement(1588552..1588779)       PHAGE_Paenib_Vegas_NC_028767: toxin HicA; CJ8421_08405; phage(gi971741659)           1.89e-08            MNNKEKLIKELENNPKNASFANIEKLLSWYGYKLVSIRGSHHKFKKDNKSIIVPLHKPIKEFYVKQILKLLKDEK
complement(1588898..1589338)       hypothetical protein; CJ8421_08410                                                   N/A                 MAKINEFKDKNSLKPHQILSRLSLGVVAKLIISYKMQNKILDLRAFDFRKYSSSNRNFFIYENTKQGFDNIDKVNIVLNLLHTLRNRACHFENLLKIRENDNKLYPRISTKEKGTNIGLMPDKIENFLNDLICLINKDLLDYLNRG
complement(1589326..1589538)       hypothetical protein; CJ8421_08415                                                   N/A                 MLGLEFIFSKQRLEHYKDINEHFENLKLISKIMPKIAILEIYLRNALDYELNSNCKEWIKISDNPFYWLK
complement(1589541..1589777)       PHAGE_Bacill_phBC6A52_NC_004821: DNA integration/recombination/invertion protein; CJ8421_08420; phage(gi31415821)     3.39e-06            MARQEAKIRELSGVKEWTPHFSRHIKASFLMQNGVNPAVISGALGHRDLSTINIYATNDTLKASQRANEALKKLQEKD
1589707..1589720                   attL                                                                                 N/A                 TGCCTTGAAAAATG
complement(1589899..1590681)       PHAGE_Lactob_Lj965_NC_005355: putative integrase; CJ8421_08425; phage(gi41179218)     9.96e-08            MAIDRKDYNIPIGKGTHLKRHKDKINSFLFRMQNGGKEKQHAFTIPLRPAWNENEYIRIALARAKEYENEFKKLFSVGYALNSSILIKNLFEIFIKTNYNIKDLNEQHKGHIRNLISIFNNHILEPLGNIHLDELTLYKVQEFYNGMKNKGLEPKTYNRAIKEVLSPMIRYAVKNKWINENVTLGLKLDRVQNKKLVTNPKGKYEAILNAILELYKDNLLYKALFLLIHSGRRRDEVLSLLWQNVDLERKTIFLPKTKKW
complement(1590979..1591063)       tRNA                                                                                 N/A                 GCGGATGTGGTGAAATTGGCAGACACGCCAGACTTAGGATCTGGTGCAGCAATGCGTGAAGGTTCAAGTCCTTTCGTCCGCACCA
complement(1591068..1591144)       tRNA                                                                                 N/A                 GCGTTCATAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCAGAGGTTCGAATCCTCTTGGGCGTACCA
complement(1591159..1591235)       tRNA                                                                                 N/A                 GCGCTCGTAGCTCAACTGGATAGAGCGACAGACTTCGGATCTGTAGGTTATGGGTTCGATTCCTATCGGGCGCACCA
complement(1591239..1591315)       tRNA                                                                                 N/A                 GTGAGTGTAGCTCAGTCGGTTAGAGCATCAGATTGTGGTCCTGAGGGTCGTGGGTTCAATTCCCATCACTCACCCCA
complement(1591340..1591417)       tRNA                                                                                 N/A                 CGGGGTGTAGCGCAGTCTGGTTAGCGCACTTGGTTTGGGACCAAGGGGCCGAAGGTTCGAATCCTTTCACCCCGACCA
complement(1591460..1592308)       PHAGE_Phormi_MIS_PhV1B_NC_028998: hypothetical protein; CJ8421_08430; phage(gi100018)     3.44e-17            MRFVFLICCACLVFANEILLLSKFDKQDFNSKDFNAYLMSEKLDGVRGIWDGKYLKTRQNYKIKTPDFFTKNFPPFAIDGELWIARNKFDEISALIRSGDSNLTLWKEVTYNIFDVPNACEEFQISTCTLKNRLAVLEEYLQKYPSAYIKIIPQIPVENQNNLNQFYESIIKNQGEGIVIRKNLSPYEKGRSKNAMKLKPYDDAECELVGFRKGKGKFENQVGALLCKMPNGQIIKIGSGLKDEDRKNPPKIGSIVTYKFNGLTKNSLPRFPVFLRLRDENP
complement(1592308..1592970)       hypothetical protein; CJ8421_08435                                                   N/A                 MKTRILAIFFIFTSLLYADENPFKTDQNITLVAPPEFQKEEVKFNSSARILKSITFNYINLDGSEDKIDLDVNKSIDWHDTYTISRFKSPDPSKVLDVSVTIPEKNSSKQESNSTANVEIPLQVAKIYDFISYAVYKNKIKLNTSDEMITDFSVGNPSKIVIDFRSKMISPTKNIRLSNSIFKRIDFGSHKGYYRLVIYLDGTYNYNIQKDATGYMINLL
complement(1592960..1593163)       hypothetical protein; CJ8421_08440                                                   N/A                 MIFWAFLVVIGAIYFGNMFFGQYSLDTLLSLENTKEELNKKIILLKEQNAKAQKDYFELKGLYPNEN
complement(1593229..1594473)       PHAGE_Strept_20617_NC_023503: enolase; CJ8421_08445; phage(gi588295080)              8.09e-141           MLVIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTGSKEALELRDNDERFGGKGVLKAVANVNETIADEILGLDAFNQTQLDDTLRELDGTNNYSNLGANATLGVSMATARAAAAALGMPLYRYLGGANASILPVPMCNIINGGAHANNNVDFQEFMIMPFGFTSFKEALRSVCEIYAILKKELANSGHSTALGDEGGFAPNLANNTEPIDLLMTCIKKAGYENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYPICSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNTGQIKTGALARGERTAKYNRLLEIELESDEYLGEKL
complement(1594473..1595504)       PROPHAGE_Escher_MG1655: DNA strand exchange and recombination protein with protease and nuclease activity; CJ8421_08450; phage(gi16130606)     5.49e-150           MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSVGLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKYAKNLGVNTDDLYVSQPDFGEQALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGDQHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFYASVRLDVRKVATLKQNEEPIGNRVKVKVVKNKVAPPFRQAEFDVMFGEGLSREGELIDYGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENPEIADEITKAIQNSMGIEGMISGSEDDEGEE
1595745..1595758                   attR                                                                                 N/A                 TGCCTTGAAAAATG
