gi|00000000|ref|CP005587.1|  Hyphomicrobium denitrificans 1NES1, complete genome. 3808687, gc%: 59.70%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1886171..1887484)       PHAGE_Salmon_Marshall_NC_022772: baseplate hub subunit and tail lysozyme; HYPDE_32038; phage(gi568191965)     3.94e-31            MDQPPWLAAAWAEFGVREISGKDDAPEILRYFREAGDTSVETEATPWCAAFLGAMLRRAGYVGTGSLLARSYLDWGDPLDAARLGAVVVLSRGDDPNAGHVGFLLSDTNGKLYLLGGNQGDAVTVAGFDKARLLGLRWPKENIEPENTGDDTIFLKALAHVLDMEGGYSNDPYDPGGPTNRGITLDAYAAFKSEAVDDVSRARLIAELKRIPDATVTAIYRQCYFDPASCPVFTAPLALMHFDAAVNHGVGAAIRMLQGVVDVTADGEIGPDTLAAIGAKSLSDLLDDYAEMRRTRYRALPHFWRFGRGWLKRVDATLALARTWAAADATNRGLLEPRQIAKGESKMGNATDTQSTDNDDSKWWVRSKTVWGTLITAAATVIPAIGPALGIALPADIIQTFGDQAITAVQALAGLFGTVLAIYGRLKADTPLALHKS
complement(1887850..1891857)       PHAGE_Rhodob_RcRhea_NC_028954: tail protein; HYPDE_32043; phage(gi971760180)         0.0                 MRVSAFGPLTISDKIWKDLRMATLALAAVGAAVGSSMLPAGVGFLGVALSGATIGSQVGALAGAYVDAALFGASGQGRAVEGPRLSDLRVTASTEGSPLPRIYGRARVGGQIIWATDLEEEIVTTTESAGSGKGGSGGGTTLTQYRYYANFAVALGEGVVTRIGRIWADEQELDLSRTSFRLYPGSETQEPDSLIAARDGVGNAPAYRGVAYIVFERLPLAQFGNRVPQLSFEVFRGVSSVEQDIRGVVMIPGSGEFVYATEPVHQTFDDGVSQSENVHQLIGPTDWQVAVDQLEASLPNAKSVSLIVSWFGTDLRAGNCRIEPGVETRHKTTAPLDWSVAGRDRTSAHLISTRDGNAAYGGTPSDQTVIAAIGDLKSRGLNVTLTPFILMDVAEGNGLPNPYGGSSQPVYPWRGRITCHPAPGKTGTPDKTTTAASQIASFVGTALRTDFSLSGSTVQYSGPDEWSYRRMVLHHAHLAKAAGGVDTFVIGTELRGLTQVRSSADTYPFVSALIALAADVKAILGASTKVLYAADWSEYFGHQPADGSGDVYFHLDPLWASENIDAIGVDIYWPLADWRDGRDHLDAIAGAMSIYDAAYLRSNVQGGEGYDWFYASGADRDAQVRTPITDGGGKPWVFRYKDILSWWSNEHFNRPGGIESATATAWVPQSKPFWFMEVGCPAVDKGANQPNVFVDPKSSESMLPYYSRGIRDDFMQARFLQVLRDAFDWTKSGYVVGLNPVSEITGARMVDLGRMHVYCWDARPYPAFPYATTYWGDGGNWALGHWLNGRLGSASLGELVGQILTDHDFAEFDASGLTGTVPGYVLDDTMSARDALQPLSLAYFFDSIESGGKIVFRHRGRAEPQMTLTAYGLVEEHADDPLYEVTRAQETDLPASAKVRYISSADVYPQAVAEARRLTGASGRIAEADLPIVLDDGLAGSLVESWLYETWAARERASFKLPPSALALEPGDVVSVDIAGRNRLLRLTDVTERGVREIAALSVDPDVYDRIDVPARTVPQPALVQVGTPAVTLMDLPSWTMSADAQSGYVAAMQKPWPGSVALYMSPQTTGYQLKALAGAPATLGVTLDPLASGPEGLIDNGARLRIRLTYGTLASADLVTMLGGANLAAVRNGNGDWEIVQFLNATLVDAQTYELSGLLRGQFGTEGAMSDTLAAGAPFVLLDGAVTRVPLQESELKLPLNWRYGPSNRNIGDDSYATTPFAYQGLGRRPLSPAHVKGVRASGDLNISWIRRTRIGGDNWELPDVPLGEDSETYEVDILDGGAVRRTISASAPSIVYASADQIADFGSVQSAVSVKVFQTNTLFGRGVPRAAVI
complement(1892008..1892469)       PHAGE_Rhodob_RcRhea_NC_028954: cell wall peptidase; HYPDE_32048; phage(gi971760179)     7.34e-22            MQTRPTRTMIVEAARAWIGTPYHHQASRRGIGTDCLGLVRGVWRDVYGSDAEMPPAYSRDWAEAGGQETMLDAAERHLKRISVSDIKPGDAVIFRLRPGVVAKHAAIVASPSTMIHAMEGAPVCEVSFSNWWRRRVAGAFRFPPVPLSPAGRG
complement(1892473..1893333)       PHAGE_Rhodob_RcRhea_NC_028954: minor tail protein; HYPDE_32053; phage(gi971760178)     1.90e-54            MKALSPDLGAHLASGATTLCWCWRVARRDSVVMGFTDHDKTLAFDGTTYEAASGFTASDIKNSLGLAVDNLEVTGALSSASLTDGDLAAGRYDDARIEIYRVNWSDTGQRVLMRSGSIGEVRRSGTGFTAELRGLAHYLQQPKGRLLQLTCDADLGDARCKVDLSSPTFRGTGTIIMASSARRFTVSGLGGFENGFFSRGLFEFTSGASEGLKIEIKSHMKLAATDVIELWVDAEGPLAVGDTFVVTAGCDKRIETCKARFSNVINFRGFPSMPGNKFLTQVGHRS
complement(1893330..1893968)       PHAGE_Rhodob_RcRhea_NC_028954: tail protein; HYPDE_32058; phage(gi971760176)         8.11e-57            MSFHDVRFPTAISRNAQGGPERRTDVVALGSGYEERNSRWADSRRSYNAGYGVKSLDDLHRIIAFFEERRGRLHAFRWRDPMDWKSCAPNVLPTPLDQVIGSGDGMTATFQLHKIYGSAFAPWARDIKKPVADTVRVAVAGVECNVEADFAVDTSTGVVTFLAGHIPAVGQSVTAGFEFDVPVRFDTDRLEINLSGFTSGAIPNIPIVEVRL
complement(1893983..1894576)       PHAGE_Edward_eiAU_183_NC_023555: putative bacteriotail tape measure protein; HYPDE_32063; phage(gi589889263)     3.13e-14            MPLTDEQQLETWNVKITADTSDLEASLATTSRLGQQFSNRLVSAFDDLAIKGKSVGDVFKSLALNISKLALKATLQPLTSGLASVFQGLISGAMPFAKGGVIQNGAPVPFASGGVIASPISFPLAGGASGLAGEKGPEAIMPLTRGSDGRLGVAAAGGCGQHITINISTPDAASFKRSQTQIAAMIARAAAAGQRNL
complement(1894581..1894754)       hypothetical protein; HYPDE_32068                                                    N/A                 MEMGLGVLGLAPAVFWSLTPRELQAILRGKFGTAGEGSAPTRAELDALMRQYPDCET
complement(1894754..1895134)       hypothetical protein; HYPDE_32073                                                    N/A                 MANRHRGEIEAQLDGTTFKLVLTLGALAELEDAFGDSDMLALAARFEKGRLSARDCMRVIAAGLRGAGHAVSDADITSMQSNGGAAGYVDIVARLLTATFGGGPVADQDRGEEANAEARDPFAGTS
1895193..1896974                   PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; HYPDE_32078; phage(gi169936050)     2.39e-51            MTEQSKLLYSTQSNDWGSVLMDRIIASDVAEFAKSHALDDLPENKQFEHFTSYITVRRHHARTFDTDDIVVGGNSEPSIDSIAIIVNGTLVTEPSTIDELIERNGYLEVNFVFGQADRGSHFDSSKMGTFGYGVEDFFRDEPTLPRGERVRLAAEIKDAIFDQGNKLRKKPTCRLYYATTGRWNEDQIPVARRDATVTAIESTQLFSSIDYHCYGSNELHDLYVRTKTAVTREFEFKERRSMPKPDGVKSAYIGYAPAAEFMKIISDDSGDDILGSIFDENVRDWQDYNAVNKEMRDTLQSPHRDRFALMNNGVTIITSRIGGAGDDLILENFQVVNGCQTSNVLFNERHEDLSKVFVPLRLIETEDEAVKQAIITATNRQTELTTEQLYALTDFSRQLEDTFKTYDEPVRLYYERRDGQYDRFPEINKTKIVVPRALVTAFAAMFLNDPTRVTRNYKTIRTKVGAEIFAKGHHIEPYYVAAYAAYRLAFLLRNKLKGDTGARFHILTALRYLLDSRPLPPMNRNEIKSRCEEMTKLLWDHAKSDELFAEASSIVHKVVEDQGLEFDRDNIRTEATTKGLLQHFGIRVADDRA
complement(1897137..1898096)       PROPHAGE_Xantho_33913: IS1595 transposase; HYPDE_32083; phage(gi21231554)            1.45e-26            MPATADLTNPIFTDADAARKHFQGIRWPNGAHCPFCGQSETVKELGGKSMGPGWYHCKDCRKKFTAAVGTIYERSHIPMTKWLLATHLMCASKKGMSAHQLHRMIGLPYKTAWFMAHRIREGMRDLNPSHGPLGGSGRTIEFDETYVGGKEKNKHRSKRKKANIGGAGKEAVFALVERSGKVRSHHVPNVSAKTLRPIMDAQIAEATRTVSDDGGARARHGEPNHHSVNHSIGEYVRGDIHTNTIESYFATMKRGITGVYHHVSAQHLKRYLAEFDFRYNERSTLNVTDAERATKAVAGVVGKRVTYQQSNDRQNDVPF
complement(1898328..1898744)       PHAGE_Rhodob_RcapNL_NC_020489: gene transfer aget (GTA) orfg9-like phage major tail protein; HYPDE_32088; phage(gi461474972)     2.24e-24            MTAQKGKDLLLKVDTTGAGVYVTVAGLRARSLSISAETVEITNTESAGQWRELLTGAGVKSARITGSGVFKDGASDATIRDYAFNGTIRDWQIIVPDFGTIQGAFQITALEFSGRHDAEVTFDISLESAGELTFTAAS
complement(1899015..1899422)       PHAGE_Geobac_GBK2_NC_023612: tail protein; HYPDE_32093; phage(gi589893772)           1.55e-17            MSSAGFALQKAIFEKLTSDASTLAALGGPRIYDDAPARAEFPFVTFGQSTERDWSTGTDEGYEHLVTLHVWSRARGRKEAEAVIAAARDALHDQDLALSGHRLINLRHEYSEARRDNDGETFHGIARFRAVTEVK
complement(1899422..1899586)       ExbD/TolR-like translocation protein; HYPDE_32098                                    N/A                 MKVDVSIGGIATSASRTRALALIREAIAKREADAEKRPKVVNQADNRNQQTRGK
complement(1899583..1899915)       PHAGE_Paenib_Harrison_NC_028746: head-tail adaptor protein; HYPDE_32103; phage(gi971482318)     1.40e-11            MKAPVKAGDLRHRIVIERAQRTSDGAGGSTTEWETVAEVWAAIWSRSADENFTLDRTAGTATHDVWIRYRADVQPDMRIRFGVRIFDILGAIDVEDRGAWLKCPVEERDL
complement(1899912..1900790)       PHAGE_Rhodob_RcapNL_NC_020489: hypothetical protein; HYPDE_32108; phage(gi461474967)     1.44e-20            MPKAQYCVSDESCAGSPAFACAWPRMTFIPIFRAGFPPARAECVRGHRIAVAPHFRLRPATRVPRAGRRARLLLLRSRNKAAPCGRLREAESQGAINKEHAMSLVMTSPPAAEPVTVADAKAHMRIDTDAEDVLIGSLILTSRLHIETALSLALITQSWKLTLDRWPKCREIDLPIAPLRSVGGVRVKDASGNATTVSDQSYLIDLASRPPRLVWNNSAPPPPGLPAKGIEIDLMAGFGDSASSVPAPLKHAILMLTAHWYERRDPLEIGKDGARIPDAVSDLINPFRTIRL
complement(1900855..1902096)       PHAGE_Entero_SfI_NC_027339: phage major capsid protein; HYPDE_32113; phage(gi849250290)     2.60e-91            MTDTTTLETKGAGGETARAFEEFLEAFEAFKETNDQRLTEIEQRGASDALVAEKLARIEETLDSAKRVSDSIALKAARPHLAGSGASPTSELAHKAAFDGYVRRGDASRLARIEEKALSAGSAPDGGYLVPAETEAAVNRALKAISPMRAISGIRQVSGSVYNRPFATTGVGTGWVAETASRTQTTTPTLANLQFPTMELYAMPAASQSLLDDTIVNIDEWLAEEVRIAFAEQEGTAFVSGDGSNKPKGFLAYDTVANASWAWGKIGFVTSGFDGAFPATAPGDKLLDLVYAAKAPYRANGTFMMSRSTVAAVRKLKDGEGNYLWQPANAPGEWPSLMGYPVAESEDMPDIGSGSFSIAFGDFSRGYLIVDRAGIRVLRDPYSAKPYVLFYTTKRVGGGVQDFDAIKLLKFAE
complement(1902241..1902951)       PHAGE_Entero_phiP27_NC_003356: putative prohead protease; HYPDE_32118; phage(gi18249903)     1.59e-37            MLMHSIEPFLLPASLSKRSRALPLEAKSLDDGGFEGYASLFNREDLGHDIIAPGAFRESLLGRGAARIKMLFQHDPAEPIGVWDEIREDARGLYVRGRLMTAVAKAREVLALMRAGALDGLSIGFKAVKARRDAATGVRRLEKVDLWEISVVTFPMLPGARVESVKTRPFAMAAPTEREFERWLTRDAGLTRMEARAVLRSGFHGLKALRDAGRTFDDDAVLASRFRDAARLMQAM
complement(1903157..1903543)       integron gene cassette protein; HYPDE_32123                                          N/A                 MSNEPKHRRTGETLSEVISQYPGELDLDAVGIWQIVPGGRANFGLSGNALTDYVRRAILALLDAGAVCRYDIFQDRPMNGRARRNMAPVAKRLPTRLFASGSRCRMIRWNLWGSAHGSLGLIPSFRNM
complement(1903540..1905273)       PHAGE_Geobac_GBK2_NC_023612: portal protein; HYPDE_32128; phage(gi589893765)         2.15e-69            MSLISEALSRWLPDSLVALGDSRSATRPPSAGVINKGTATGPLIAYQTLGEPVWAPRDYSAFAREGFMQNAIVYRCVRMIAEAAASIPLLLYEGTNEIEDHPLIGLIRRPSLDHTGTDFLEAWYGFLLVSGNAYVEAVALDGELRELHILRPDRMKVIPGVDGWPEGYEYTVYGRSVRFLDDVVEGVRPILHVRLFHPVNDHYGMSPIEAAATAIDIHNTASGWNKALLDNSARPSGALVYAASNGQMTDEQFTRLKDELETNFQGARAAGRPLLLEGGLDWKPLSLSPKDMDFIEAKNAAAREIALAIGVPPMLLGIPGDNTYSNYQEAQRAFWRQTVLPLVNRTARALSSWLGPAFETRPALGGRLRAAESPSANVRLELRPDLDQIEALAPERDALWKRLEGASFLTADEKRAAAGYAAKPDSSPSLKYREDQPRVPAGQSGGGQWTDGDRVAMAKIIQGAARYLLRNPKVLKPAEKTLEDLLKPGGKELGVRAARAGDDIRTLERSEFEKLKSDLLDGATEVPAPKGYDGKAYQRPDGTLLGIRESKKIWRNPRRSEIYRSNVDRKRLQDTQK
complement(1905572..1907062)       PHAGE_Strept_mu1/6_NC_007967: terminase large subunit; HYPDE_32133; phage(gi93007440)     8.07e-59            MNASIANGRLSEVLNELSAAELEFIAYDWQLWARDDQLCPSLIGASDSRSASRPPSAALLDESRAPSSAPGGRLPAGESPGAINKAWRVWMLLGGRGSGKTRAGAEWVREIARGEDPGPHSAAGVTPPRLAAGSPEGGRKAQPIRIALVGKTLGDVRNVMIEGQSGLLAVHPAHERPDFEPSKRRLTWPSGAVAELFSADEAEALRGPQFTAAWCDELAKWRNAEKAWDMLQFALRLGDAPRACVTTTPRATKLLKKIIADEATVTVNLATADNALNLAPTFLAEMTRRYAGSAIGRQELLGEIVEDASDGLWRRHWIEEARVEGAPEMQRVVVAVDPPVTATASSDACGIVVAGLGIDKRAYVLADRTVQGRTPEVWARAVLGAYDDFEADRMVAEVNQGGDLVVSVLQQFRQNFPVVKVRATRGKWVRAEPVAALYAEGRVAHVGRFDALEDQMCAFGCDGTVKGRSPDRADALVWAITDLLLSDTMKPTVRML
