gi|00000000|ref|CP006708.2|  Campylobacter jejuni subsp. jejuni 00-2426, complete genome. 1680813, gc%: 30.52%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1219837..1219848                   attL                                                                                 N/A                 TCTTTTAATTCA
1220142..1221317                   PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; N564_01247; phage(gi16130540)     2.59e-36            MAKINKLTDSFLKSIKCESDKKFIKFADPSLKGLYVFIYPSGKKLFKIRQANDTYIKIGEYPLLSLAELREIALNAFKLKAKGQNIKNAKRLKFGDIYDEVLEKCKADGLSLKEIQRGLKYKNGVFKNFKDVDIESIKRSHVIETLKTIEHQIPTLIKAKGWINKIFKYALQLEIVENNPVTSIDNSIVFKKASKVIHQPTLLENDKIKEYILALKNSDLKKTHKNLMLFNLLTAQRPGNVIKATWDEIDLKNAIWTIKAEKMKMRKEHIITLNSQALKILKEQKKMKVNDYIFAGSSKNGCNSENITCNINKRLGYKGIQSAHGFRAMFRSLANEHQLDHGVSMDIAEQCLAHEQKNAILKAYNRSENIELKRKLMQWWGDYIEKLAGDF
complement(1221314..1221520)       DNA-binding protein; N564_01248                                                      N/A                 MAKFGKIEKLLSTKEVAEYLGFTPLKIRKMRMRVNQNKFNFPKGIKIGSTFKYEKAEIDKWLQTCKVI
complement(1221522..1221875)       hypothetical protein; N564_01249                                                     N/A                 MKEFKEYIKAKIALEKELENTQEMLKQTIKEMLLLRNDNAFNQNANDEMLKAINKNWKITASLESLSDTLEIKVLEQSTSYNRFCFGDVLILISNFLSYEEQKAIIAKLGFDLEKGV
complement(1221893..1222648)       PHAGE_Lactoc_Tuc2009_NC_002703: putative methylase; N564_01250; phage(gi13487817)     2.35e-124           MFHPQLYNDHFQNFKRYNIPKAQLVIADIPYNLGNNAYASSPEWYINGDNKNGESKKANKAFFDTDNDFRVSEFMHFCSKMLIKEPKECGKSPCMIVFCSFEQQTMLIEVAKKYGFNHYINLVFRKQSSSQVLKANMKIVGNCEYALILYREKLPKFNNDGKMIYNCMDWQKDEGIPKVHPTQKPVKLLERLITIFTDAGDVVIDPCAGSGSTLLAATNLNRKAYGFEIKKDFFKSANEIMFKHIERSLFA
complement(1222626..1222892)       emm; N564_01251                                                                      N/A                 MKKNTNQQLEQLKELNQGELNQEIEVLTKRALAIHRSIQRVKDERSILNQNIKDYQSEFNEIMEKIAFLKEPNLFNQKGSDDVSPTAL
complement(1222876..1223247)       hypothetical protein; N564_01252                                                     N/A                 MNITRELEAYDLAKLVLNNDLKYFFKDAKIVGENKERRLCFYFSDSFVLALFEKEKENILQRLREEYKKKLEFYKRIDLVFYSIAAKGINELKARSKEEQEVLERGLLKLENIIKRIKNEKKY
complement(1223248..1223472)       hypothetical protein; N564_01253                                                     N/A                 MKVNFIFKGTIKCSKCNLEFVPNSKFFKGLDEIIGDVKSVSLDGFCPECDNKLKATFEVEKITRELSKTYTMRC
complement(1223481..1224242)       hypothetical protein; N564_01254                                                     N/A                 MRSTTRNKSIDEFAKDKFKGIKTNDKFYPFKMRYINIKPRNKSLSNTIIILDNSKACFELSKKNKKAKDYYIEVQFNGLYQPSKQIEAEVWKILSKMIKRFKAYSVDIACDFDDDLAVSKPREFKHQERFSKLKIFGDFHTYKTSMYINNPQSKYYKLERILLYDKYEKQKHYHKENIKREFVRWKRLELTLKIKDKFLDRIENDINDALDLMQDYLRMIGIWHFNMRVILEQTKYLNNPRWAKTFKPYALAS
complement(1224179..1224493)       hypothetical protein; N564_02195                                                     N/A                 MSFKPIQKDNDAFKKAQRAKVIESLAMRGYALVKISSNGFLMKKGFEKDILCKQIIAQDTTASVSLSTKKPFTNTLKDGGFLKKCEAQQEIKALMNLQKTNSKA
complement(1224572..1224892)       hypothetical protein; N564_01255                                                     N/A                 MSNKPYLENEIKALKYQLLIEKQKHKKTKEKVFKLKNIQGEKYEKLKAEFAKNQLFVFRDDELFLWVESLMRELKTKILCTNDELSKKACDILVFKLEKRRKNFNY
complement(1225280..1225516)       hypothetical protein; N564_01257                                                     N/A                 MTSEELKQFCKEQGLTYKELAELIGFGEGAVKNAISTEKISFQMAHAINMLKKIFELEAKLEKAEAIKKDFKAWINEN
complement(1225530..1226297)       RloG protein; N564_01258                                                             N/A                 MTEEKENIVNFKIKIIHEENIELGIMANSLLSFQKLMDSFISKEHGITQSKIFLEKVETGSDIYSLVFEIAGEVLPIIAPIQALNEFIELIISFKNIKSKSIEEIEENPHFTKYNANNLKNIFAPVTINQNTFFINHKGEELLRINSDEAELIYENANYICEKKEIEYQKIHENALITMYKTTNKIDNKTKHKAKCDALSPYAVDVSFSDEKIAEEVLKNPYGFNFLVDLEYYKNDKNKIILYRIFNIKDKISLE
complement(1226435..1226665)       hypothetical protein; N564_02210                                                     N/A                 MEQEIAKIKKFKLECKNCETQIIIDTHNSIKNCPVCGLKFYDNLESPFENLHEQILLINKNKNVKVYFVCEEKEKR
complement(1226631..1226894)       hypothetical protein; N564_01261                                                     N/A                 MDKNLKKITELKIKCKNCDTKIITKIGNVIKTCPQCGIKFIDENLGYNLFEILTELFKSVSKNKNAEFYFVCKKECDGTRNRQDKKV
complement(1226951..1227238)       PHAGE_Campyl_IBB35_NC_027989: hypothetical protein; N564_01262; phage(gi937456610)     3.21e-29            MPSDRVEIELFTGFYDKKGNKIYEGDILYSFEGCSEDEAFKYKVVFKEGAFYLVECGDDGEEWDEDLLSEFCLEELEIVGNIHENAELLNENKPS
complement(1227291..1228022)       PHAGE_Stx2_c_86_NC_008464: DNA-binding protein Roi; N564_01263; phage(gi116222069)     7.52e-26            MNLELFKKDENKEISLTSLEIAELTGKEHFHVIRDIETYLEKVVEGGISKFGDTYQNTQNKQSYKYYRLPKREVLILVSGYSVELRAKIIDRLEYLENELKKQSYKPLSLKESLQMQLELLEKNEKLQVENQSLKNEAEQNAPLIHFANRIQNTNDAILIRDYAKILHEKNNLEIGEKRLFKILREKGFLMSDNKPYQKYIEQGLFKVSETTVSTINGDRLVSTTKITGKGQIAILKAILKAS
complement(1228453..1228737)       hypothetical protein; N564_01264                                                     N/A                 MKQAIKQKLGVSSITEAGLKLNLAHNVLNSWLSNNLTNAKVEIALLKLGLREDERLIKRIEKLKSEYKKNEIRKQAYEKYMREIKVLLEEIEAA
complement(1228734..1228937)       hypothetical protein; N564_01265                                                     N/A                 MIEARSILDVLSFRKTEEKEELRKCFNFSDEVFEKGLNFLHTNDEISIEAVSDGLFEKTIISIKVSK
1229142..1229795                   hypothetical protein; N564_01266                                                     N/A                 MSENKENISFENYEKNLKLQLESKRKDLDIQLTSIIPGQFQTIKLYMWLCTFIIAGDITILNNYIKTTHTDLFTIILFSVSIIFLGYCAFFSLLALKINNTIAFPQDQYGEMSKLNSDNLEHTNGINAMISSILDAFDKNNKIINNMSKDIGKIYVFLVIGASISFFAIITSGAQIVKGEIIMSDNKEKVIKPTPQTGTTTPIIPKTRGDKPEQEKK
1230030..1230692                   PHAGE_Pseudo_MP22_NC_009818: c repressor; N564_01267; phage(gi157834973)             4.32e-09            MENYYELVEELKTFFNVKSLEEVAERLGYKKNNANNWRNNKQLSAQALKKYYELKKANNSVSIHHHKDTITIRYFPDICASAGFGNANENENFQLINIDKAFLTDVLGVPYKTQYDMIKIYGESMEPFIQNGSFIIIDTTKNSLEKIRNADVVIFRDNDNELFCKRILKNAFDDDIVISSDNFNFGDKKIKKSALKNYVFIGVVVCSCNAKIFLNQIERV
1230698..1231351                   PHAGE_Entero_vB_KleM_RaK2_NC_019526: putative nuclease; N564_01268; phage(gi422937180)     1.48e-13            MKKLIILSLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYINCYDYSLKGTKAVAYRLEADNLKGEQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVLNLVNYDNNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHDVENENLRIYKVKCDNF
1231368..1231649                   hypothetical protein; N564_01269                                                     N/A                 MEIAGLVYFIFAVVCAFELSYDAKQRNMSSLWWGIVGFFFGIFGCILYLAVKKPYRREQKISKMRDLEFLRGLKEKRCISEAEYEKYKAEVLE
complement(1231778..1232197)       hypothetical protein; N564_01270                                                     N/A                 MINLLFGNAKLYIALALMAILTGYFYLRLDSTQAKLEKSQSDLALALKINENNQEKLKELNQIHKTELKALNEANNQKNQVQERVQYVKEYIYKSNENNITKLFNDVVDRLWDANSTSSNQNRNSKSKNSARTTNIKSS
complement(1232426..1232887)       PHAGE_Helico_KHP30_NC_019928: hypothetical protein; N564_01271; phage(gi431810564)     2.86e-10            MKITINRRYTGKTCVIGKFKVLDDDDKILFECFSLEEDKEGLESGKDLRIPEGNYNLKRHSPSRFENTLRSITKKDDDTMINVYNDDVPSSRAILIHWGNTDKDTQGCILLGLTKDNNNESVGQSRQACKEFYDLMHGKNLEDIKLEITNELA
complement(1232936..1234219)       PHAGE_Campyl_CP21_NC_019507: putative tail fiber protein; N564_01272; phage(gi422935209)     3.74e-37            MSVDLREIAIKTEEINKDFSEALEILKELFKNGVKPSDESIKNAINEVLTSFNFIKQSELKEKLEALLEELDINANINEESLKEVVLKVVLENQESLKGDKGDPFTYEDFTEEQLKNLKGQDGAKGADGKSAYELWLENEENTGKSQDEFLESLKAQTPTKEEIKPIIEEMLEDMKLNLGINGIKVSNSIPTPKTKANVNDLIITYNENVKQLWLCVASDDKYTSWINLLGNENITAQELIIISFDTNLNSGQYGGCLSDLRFGFENSLASTTQIIKGLNEGSFLITKDGMGLKSKNYTEVSVLSKPSKNQIEGNIKTSGIYNDPAWHNITNALKKYDGNANECCLWASNIKNSVSIELFTNEIPMSLFYRQAGYYGNVNLSNIKMQKALRVQNEIIVERSFIGIKKEIDKTTYGDNAFLFEFEEEK
1234035..1234046                   attR                                                                                 N/A                 TCTTTTAATTCA
complement(1234216..1234590)       PHAGE_Vibrio_qdvp001_NC_029057: tail protein; N564_01273; phage(gi985757190)         2.82e-10            MTKTELKRVCVKPYDKDRFEVIQDYEFILPNYKGIVPQGFKTDGASIPRLFWSLFPPFKSEYFSACVVHDFLCEKAKSRKDYKLADLVLKEAMQALGINKFKIFVFYCSCNLFHEIKCLIKGIR
complement(1234583..1234966)       hypothetical protein; N564_01274                                                     N/A                 MSTENIIKEGAILGSLSGSALLGLMVFVLAGIAWHLYKTLHKEAGERTKELISETKNTNVLIREQIAVSRASSDSLVKFIETHCSKTNDKLEAIETDLMRMDERLVKLTQIRNDELRSIFKKKENND
complement(1234963..1235598)       PHAGE_Nitrin_1M3_16_NC_024217: hypothetical protein; N564_01275; phage(gi643655223)     5.07e-14            MFYDLKNKSLKYDDIFLKDVKIQNEEGEIDAQDTYFLSACDDKLLKELGFAKVKEEEIPSFNEKIEELRQIQTYDEENNLYIISYEIKEKALEELKELKLEELKAIKEEKLLFMPFKNTIFQIDTEAKINISGKVSEIMLANLNNTPLENIAWIDKDNKIITFNKEEFLEFGVGIAKYTESIIFKNDELRNKVKNATSLEELNLIAWESEK
