gi|00000000|ref|CP006734.1|  Leifsonia xyli subsp. cynodontis DSM 46306, complete genome. 2686418, gc%: 68.35%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
2150353..2150364                   attL                                                                                 N/A                 GCACCCCCACGA
2157438..2160278                   PHAGE_Staphy_phi7401PVL_NC_020199: phage tail tape measure protein; O159_23070; phage(gi448244674)     2.64e-44            MADRTTKVTFTANFNNYLAGMDAASRKTQEFAAGSAQKLAAQKQAFTDIGHTALLAGGVIAAGLVVAVNAFSEFDAKMSQVHALSHASGDDMKRLSDAAMTAGTQIGFSAAQTADAEIELIKAGVSVSNILGGALKGSLELAAAGQIDVADATEIATIALTQFGLKGSDIPHVADLLAAGADKALGGVSDLGEALKSGGLVAAQFGVSLDETVGTLSAFANAGLLGETAGTDLRQMLLKLADPSAEAQHDMERLGISLYDQQGKFVGIANLAGQLHDKLGALDEATRNQTLATIFGARAIAGANVLYKEGAKGISDWTNNVNDTGFAAAQAAGKMDNLQGDITKLGAAFQNDLIKGGSGANDVLRGTVQNVTALVKTISGVPQPVVAVGVVIAGLTAGVLLLGGGFLSIVPKIAATKAAMAELNLTGRSLGKMLGKGGLIAAGLIGLEGALAGASSSIQLTSAQVSDLNSRLNNADFTGINKEFVDANGNITKMGDALDDLFSPNFFKNYYGGVAQLNGVLKNWTGIDLGAWADTNKAKFAQLGTQLGETAKKDLPQAARQFQQFVKLAGGGSEKAHELLNAMPDYKAALIDLASGMGKTLSGQELLNLAQGKGTFAAKLATKSAARQAAALAKLSGTAVDAKGDISDLAKEITNFGKAEFDAEDTDRALHQAIDDVTSKLKDQVDAYKQAHGNLNGFTKSLDINTQNGRDNSAALEQIAKSALAHAAAVATQTGSQEQATAAINDGRAALINALAQFGVTGQAAQEYADKLGLIPSNVSTLIKLNKSQAQIDAENLIDTLNRVQRNIDIAVTLHGANHLATTGGLRVANANGGMYSYADGGFGAGIYSGGAPLYKFAEPETRWEAFISGKPGQEARSRQIWAQAGRKLGMGPSGAASSTTVSLAGATILMSVDGRQMTAVIQDQIVSASRAQKTGLQGGMQEVAY
2160278..2161120                   excinuclease ABC subunit C; O159_23080                                               N/A                 MPYAPTLTAFTDANPGVRVLVTFSALASGTQTINVYRTAEGRRFKVRGGVNLYAVGGVAVMDFEVPLGVAATYQAEQFDSSGLSLGFTDATSVTVSTSGVFTDTSQAILHQPLSPSLSIIANLDASTAADVANVVPGSLTYPEGATVGTWIGGRRQGISGLALTVKAQSYADADEFRNMFGGYTTDFPAVLCVRTAPPVRLPRVLFASVDMVHESVDYINSLVTFALTVNEVAPPAPGLIIPTLRREDLDVAYATRGAGDAAYATRLSRDTDYSKAGLAG
2161117..2162277                   PHAGE_Propio_PFR1_NC_031076: hypothetical protein; O159_23090; phage(gi100015)       4.35e-06            MRFGTPQLKQVLTGSFTHRYVVDVIKDGSRALRDVPVTNVRLTDSGASLVQSTGSLTIVYQGDFADSVAPSRIGDILAPFGTRLIVYALITAGPGFQERVALGHYLITGAPKIRTTRFQYQGAGAVKGDLIDLTIGDLFAGVQWDRFDIPGVAPDLTSVWKEYQRLVGLPVTRTVADAAIPTAVAYQEDKLQACYDLATVLDGVAYMTADGTASMRPNVWPAAVDTLHSGDVNGDGTPVKAGATSDGTLVDVVPSLANDNVYNAVVVRGNSQDASTIVLATAEVTDGPLRVRNQDGSLSPYRRKPYFYSSQYVTTQAQADAYAQQMLPRVSRLRSITYDLVETFNPLREVGDVLTVRRLGQAFTCRITDISRDAGATQTVTVAVNP
2162274..2163161                   PHAGE_Bacill_Shbh1_NC_030925: valyl tRNA synthetase modifier; O159_23100; phage(gi100125)     4.98e-05            MTDDYSAALLRALQGRARVKILQGTFVAQSTFGCNVDVGVGSSSSRIPAHLGTSFLPEVNEPVWVWNIDKQWFVTGPVASKPDRGTVVSVASGLVTLTTALGTTVIAPYTGPSPSAGQIMKLLWHGGPFAMLMSTSPVPNTPPPAPGGGTTTHQDVFTAIDAGSYGSGRWWTNQVYASDKNLGCWFYGTKTADTIPASATIQRVELYVSPERISGSPPNIAVHGYSAKPGDAPALATVAAVAISGGWVTLPASIGNNLKAGGGYVGVGFNHGGYSILRSLAEDGFSGALRITSTY
2163229..2163795                   hypothetical protein; O159_23110                                                     N/A                 MPAQAADLSEVSNYAAGVGNRKTGTSTTRTGLTGADVWDGLEFYETDTGATWEHGSSGWARKRITRLGRARLTSPLVLSVASTWTDVLSVTVTSTGGLTLADWRAYVSNQNSGSRQIAQFRVLCDGTQVDDTLNNDLPWISGATSQYAAGFEHELSTAAGSHVWKLQVQCSSASAISVNNAVLILSEV
2163798..2164742                   PHAGE_Propio_PFR1_NC_031076: hypothetical protein; O159_23120; phage(gi100021)       8.00e-10            MTLLEGVDISYTQGDYTPAGEDFVIINASRANVGLTVGSCYRAQVALARAAGRHVGHYFFNGNLDPVVCADFFADNLAYVAGDSLWLDIEDEASTGTRAWSPAQALAFLNQVKTRLRVVPGVYLNKSLMDAADWSAVVAAGAPLWIASYTPSPPPIRWWPDWTVWQYTSTPIDRNKAQTSLTTAFTTPTPLEEDMKIQLIKTGDASGAIGTLNPDGTLDWLTADEFQALTRTGLIEPVHAEGDGTVWGILASRTARLRAQQGGDPVALAKSVSALLVPAVLAGIQANSGLSLTPEQVQAACETAIKDVFAHAST
2164792..2165226                   PHAGE_Mycoba_Serenity_NC_028932: minor tail protein; O159_23130; phage(gi971757181)     4.95e-06            MGWATLIAAAVTAAGGMAAIVISIVLGARTRRAVKNIASDTREVKEQVTNSHTTNLRDESDHRHNELISEITAVISEITAVRATQDTHGERLDEVQRTQRGMQRDIGRLADADQEQTRTDHRLSERLTDIEKNNPRPHLPEGES
2165223..2165570                   PHAGE_Arthro_BarretLemon_NC_031252: hypothetical protein; O159_23140; phage(gi100029)     2.51e-11            MSKHLTAEIPEIIHTGQRVLRTIIQTGIPAFLTFAVILPQVIDALGLPLTSKVYLWLVGLAGIVTGIAAALTRIMAIPTINRWLTTIGLGTIKKTDPQTPANPTQDPTTTPPANP
complement(2165789..2166505)       PHAGE_Gordon_Splinter_NC_030927: hypothetical protein; O159_23150; phage(gi100001)     1.87e-06            MGATARGMVNGQDRTDSDGKTIHIPPQINALNSSTDMVLVSAGGTDLGFSRVIISCLAESGKGPVAETGSRTCRQDYVKNGHDELDRRITDVVGPALDALYGQISARAPHARKFAYDYPDLFPDRANTPAAGCYAFTTTGTGDLKETDMPFTDEDVVYLHQVQDKLNGLIKREAEKYGFTLLPASSRSQARTACSAAPHWVNGLNALGAPDRNGEAFHPTRVGIAHYVDVFKYATKKN
complement(2167773..2168093)       hypothetical protein; O159_23160                                                     N/A                 MNPHKFIRETSEKLFTEIVFTKLSGLLAFLHNLLKACRNREDRCAPHIDGFYKVASFEAEGSPHLFAVRVYSPGNSEPSDRIILPVTNNSYGTVLADNRVKTFHHL
complement(2169339..2169533)       dihydroxy-acid dehydratase; O159_23170                                               N/A                 MCSLVLADGLKLKGREVCLGGFGVSDGYVGVGHEGVHVDIIQIVVFGCSFLSTQGGSVDCDGLD
complement(2170672..2171193)       peptidase; O159_23180                                                                N/A                 MNKSVLALALVGVLALAGCSTTPAAKPAHKTTSTPAAVSIGEDAGVIAIRIKGCEDVRVGDIAGGAPALLSTATCMLYGHTINVNSWASGRDSNIEPVLAGDARETYYARGDSWTVTLGDDPILQYQFTNQADKLLQAAFAGHTAGPVNLSVEQNVARAAVASLGGEVYHYVP
2171154..2171165                   attR                                                                                 N/A                 GCACCCCCACGA
complement(2171241..2171316)       tRNA                                                                                 N/A                 GCCCCTGTAGCTCAGTTGGCAGAGCAAGTGACTTTTAATCACTGGGTCCTCGGTTCGAGCCCGAGCGGGGGCACCC
complement(2171317..2172084)       PHAGE_Mycoba_Phrann_NC_031266: hypothetical protein; O159_23190; phage(gi100037)     2.98e-49            MLSRFNPRTGCPLAAGTKQSERSYYQTFFTWMQVKGHRPDNPSAGLPKIKIPRRKPRPLRIQQVDAMLDSGAYKRTRDIITIAALSGLRIGEIVKIRGEDVDLDGGVLCSLRKGNLAHVIALHPILIDLARSYPRTGWWFPSPHRNEQFPNGSGHILMKSASARVSKAIRNAGITDRNLTGHSLRHFYATTLLKQGVNIRVVQELLGHASLATTQLYTEVDQDDMRAGVATLPPIAQRRSSARMRTIPESDKMVG

#### region 2 ####
2351246..2351272                   attL                                                                                 N/A                 GAACCCCCAACCTTCTGATCCGTAGTC
2351646..2352443                   PHAGE_Mycoba_Halo_NC_008202: integrase; O159_25130; phage(gi109392319)               1.35e-65            MWAQAIREYLVAQVAAGAPPTTCATRRQHLEHLARRVDVGPWSVTGADLVAYAGAQVWKPETRRGRRSTFRSFYGWAVAVGHVEASPAVVLPRVKPGQARPRPIPEHVYEDALLRSDERLRLILRLAHDAGLRRGEIAVVHSRDLFEDLHGWSLRVRGKGNKERDVPLTPRLALELRTLPPGWAFPGDEGGHLSARWVGKLATGVLPDGWTLHTLRHSFATHVYARSDLAVTQDLLGHASPATTRVYVQVADGRLRSAVLAAAAG
complement(2352408..2352635)       PHAGE_Mycoba_Butters_NC_021061: holin; O159_25140; phage(gi479336490)                3.80e-08            MNNLIPNPATRAWIYRILIATAATAVSYNLITPNQSNLWLTLIAAILGLSNTLALTNTPTTGKHSTSSSGEDSGT
complement(2352660..2352890)       arginyl-tRNA synthetase; O159_25150                                                  N/A                 MPDWLLTLTVAALAATGSLAATRYGRIARLEKRLAELETRERTLWVYTRDLIDHIYRGEGPPPPPPPPTGYYADKK
complement(2352883..2353596)       PHAGE_Microb_Min1_NC_009603: hypothetical protein; O159_25160; phage(gi149882840)     1.58e-11            MTALRTPTQAIAYALAQQRWPHGMCLGFVWSSYAPDTTITSDLTAYGYPPPITRAIDGWNGSPLKHPGDRNPDIGAPVYYTAARSGATAGDGHVALYIGDGMIRTTDAGGYGINATVPLDWPEHNWGRRYLGWTADILGWPIITPTPPIPGEENMPSAVIIKNNDTIDKSLYLVPDDGDLIVLTSMDEVNALIMSGAVRPGPNGQPFITAPDGLLIQMRQQIAARKREQRENGQQNA
complement(2353593..2355743)       PHAGE_Rhodoc_RRH1_NC_016651: hypothetical protein; O159_25170; phage(gi372449814)     1.25e-07            MAIGGVPVPEVWDGGDMVAVDGVRIRWGRTDAYEQPEPGVLTLTLIDRTGGFISDARRIGRPVTVAIRVREATPEQVVFRGVITQQAAKRHRIHNPLTDTDEDVWVVTVTASDTLATLAMAVLPGDALDGWVEGAGGWSEQTPENRLGTLWTHGLSAILHWIQTPRLSAGTPKAVPILHGQAAEAARSVRDLINQAYQAEPLAVPSYDPGANEVTVARFATASPLALTLESGRITLHAPDGQIVPAARVRVNDLTVESTVADAIDVVNLTYWWYGADPALTPGEQKRTLYTQGFIQGRTDQYDPAGMRVLKVDTQFMTFDTTEFVPGYRDAYNRFPTRLLTDILTIVNGLNGRLRPPTLTFDMKRLPLPEETEAVLYRGPSCKTFPSTLPRQRVQRRGGHGAAVPDHRRHPHLHHRVGPRGHRHPHPHRDGRIACPRPARHPPHTDPRRLRPDPHPRRTRPRHDRTRPMTGHTRRYNIPYPDGATKAYKLGDELAALAVGVEAALTAAGIPAATNPPIVVAPTLDARDAHFGIPGSESERLTLQTHGAHTIRTDKGWTERYYATYDPDTNPQGATPAGWYPIPGTVLASATQGDEFILPTGQTLTAVPGLTATGVFPDTPTLVHANMLLINKDSGANQGVTVQIGQDGIPLASRRYTVAPWASGALAAVPFTLTVPVTGRAGTHAYTLHATATPAIAIAEATLTITSHIPRHGNPS
complement(2355761..2356570)       PHAGE_Rhodoc_RRH1_NC_016651: putative tape measure protein; O159_25180; phage(gi372449813)     3.88e-12            MAILELLTQQTGDATGQFAREANTAEGAAQRSAAQWQNVSAQLGTVLLPVVTWVSQALTDLAGWVSKNTGVATVLAAGVSVLAGGILVLNGAIRAWRTIAEIATAVQWAFNAAMTANPIGLVITAIGLIIAIIIVLVTHWKEVSKVASDVWDGIVGGIKTFIGWIKTAIDWLSRLFGAQQKTTSGGKHATASATASSYGGVPAVFVAGYTGFISPFTASALPSATVVNQNVTITVTGVVTDPEGTARQIRKLLDDSAAIGGRTPAGGRL
2356569..2356769                   hypothetical protein; O159_25190                                                     N/A                 MACACLPAAPVNPDAPSAARRALISDCLIETPVLLDRVGLSLAQQGAERLDSIRGGATVGGREVGT
complement(2357301..2357657)       PHAGE_Arthro_Decurro_NC_028692: hypothetical protein; O159_25200; phage(gi966201227)     3.70e-06            MTMPTDSAEFPRLSVAYAPPGAPAATLVCRPGYSDAARYEIARDRAGWPALDDAPLFAMAFMAWSAIKRDPAAPGVLKTPTVDAFLDVIQNVSPALDDRGEAVTSRVDPTLPGPPPGF
complement(2357665..2358054)       PHAGE_Arthro_Decurro_NC_028692: hypothetical protein; O159_25210; phage(gi966201226)     8.53e-15            MSGMANTPDAGALQVQGLARLRRTLRAAGDDLADFTQVNTAAARIAATAVRGRVARRTGALAASIRSSGTKTAGFIRAGYATVPYANPIHWGWFARHIKPHPFLSEVAQRSQPVWCRCMNATSTVWLTK
complement(2358051..2358473)       PHAGE_Rhodoc_RRH1_NC_016651: putative tail protein; O159_25220; phage(gi372449810)     1.46e-16            MTATVQKTGPGKFIIGDNADITVFETQVTSITLEPDVKSEDDMLVLSGDTVAGADTETWTVKGKLNADLGAKTSVQEYCFTHAGQAKPFKFTPATASGRQFEGVLKIRPTAFGGDVGSTSQVDFEFPVIGRPTLTPITGG
complement(2358492..2358851)       PHAGE_Rhodoc_RRH1_NC_016651: hypothetical protein; O159_25230; phage(gi372449809)     6.23e-08            MSALATLGTDLTALAEKWSAAGVACVIDPRDMVPPCVWLIPDTLTFDRLGGSGVTATVNAIAVTPDTGTSRIVLDDLGALLDGLDGLAGITGVVQTVTLTLPSLSPDPLLGLQTTLTLT
complement(2358848..2359183)       PHAGE_Arthro_Decurro_NC_028692: hypothetical protein; O159_25240; phage(gi966201223)     1.42e-20            MVVGEKRGVAAAQLSAWSKVPADDQNMSLVVGAVNAYVGGLPVVAGVPEDTAWPASVTLGALMLGARLLRRRNSPNGVEALTSDVISYTARYDSDIARMLGLDGFESPAVG
complement(2359188..2359664)       PHAGE_Arthro_Decurro_NC_028692: prohead protease; O159_25250; phage(gi966201222)     3.04e-37            MDDYKRKTEAWLVSELLTAATTVAPGATFAQTLAGLGVAAVTLGARLDIISMATDQWLAFAALKESEVPWWLRSQGELQLGTTNGTAGGLSFECDPELPSGTILAADSRAYTPYEKGPIQVEALNIPNGGIDLGVFSYIAAIVNDPRAVLKVVNTAGK
complement(2360000..2360764)       PHAGE_Rhodoc_RRH1_NC_016651: caudovirus prohead protease family protein; O159_25270; phage(gi372449807)     6.90e-10            MTNPPHPSQSHTPEPLQASLTVTVTASSPAARTITGRIVSYGETGHASTGPTQFAAGSLAVPTDLSAVKLLIQHDTYAAAVGYMTDFQDGVDHADATFTVHPGHDGDTALVQAKNGSRDGLSVGAMITDYAYAADGDTLLVSAATLREVSLVTLPAYPDARVTTVTAAQTPTQENNMNPTPAVPQTVPQAATPAQPAPRERENTPYRRPDRAGGAGGAGCAFDRWGPVPGSGVGGVRGRVPAGHAPAAVDGGVE
complement(2360761..2361294)       PHAGE_Rhodoc_RRH1_NC_016651: portal protein; O159_25280; phage(gi372449804)          1.34e-24            MPQEQIDALIARWVAARTGENGGVGFTNATVNATTMGQAPEQLMIAAHTQSALDVARACNLPAWAVDVSVEGNGMNYTTVPARSRELLDYTLQPYVDAITSRLTLPDVLPQGQECTAVTAALIAGDFNARMQGYQSAIAAGIYTPDECRLIEAGQSVPLRGDTPQENPDTPKEDPTP
complement(2361366..2361899)       PHAGE_Arthro_Decurro_NC_028692: portal protein; O159_25290; phage(gi966201221)       8.77e-27            MVAGLRQSSLMAPAASPWRDDDVLTRLTLGELFGTETMPVGRREAMSVPVIARARNLICQQIARFPLQVTKTGIPIPGQPGWVSQIEAGRPRPITLAWIVDALLFHGRAFLEITERYATGYPSRFAWVPEWQARTDGAGTLLAVDSRRVKPGEWIRVDAPTRASCTLRRRTFGTRLR
complement(2361962..2362177)       stress-inducible protein; O159_25300                                                 N/A                 MPRKTTDYTWCDESASLIVVRCHACPYWHGFAMDRGEFHDVAVRHEHTIHPGVTNAECAREQYRRRQRKRR
complement(2362247..2363626)       PHAGE_Rhodoc_RRH1_NC_016651: terminase large subunit; O159_25310; phage(gi372449802)     7.20e-56            MRLTVFAPEPRFLTPLDPAAATEGHQIGKLAAALGKPLMPWQRIVARGATEKNPDGSYKYKIVLVTVPRQSRKTTLVGPVQLHRIMTRPGVKAFFTAQTGKDARARFTDLGELVGASPLASLFKIRRAQGTESITVANGSGVHLFAPSPSAIHGETPHLVTLDEIWKHDAVRGGELMGAIGPAQSTLDGVSQIWMIRTQGTAQSGFMNEYVERGRSGDPNMFYAEWAMPDGADPYEPKTWWVFHPALGNTITQAALEKEAANQPRGEWMRAYMNRLTETIDPLVPAADFAALTADPIQVPSRRALAIAYAVSPGNELATVCATWRDIDGAPCTRILHTAGGTTWVVPFLLDLCAHWQPAHLAADDGGPTRAITDELERAYESGALYVKPSTTGPKDFATACEAWLGYVTEARTLKHDGSRTLTTGLANLVMRQSGDVRVFSRSRSTGAIIGPEASAVGL
complement(2363601..2363867)       hypothetical protein; O159_25320                                                     N/A                 MVVAQIDELTRLGYVQAHHAGVCELARVTARDLDSSTGRGAPSGRANLLRVMNEVLASLPQPEATRRDALDEVVAALLQDDAADGVRS
complement(2364021..2364302)       PHAGE_Rhodoc_RRH1_NC_016651: HNH endonuclease; O159_25330; phage(gi372449820)        2.41e-18            MVAEPGVSQPGWGGRRAQQFVALTLATYGDTCWLCGLPGADTADHVVPRSKGGAVYDVLNLAPAHRRCNEARGNRAVTGEEIVEDGRDFFTVE
complement(2364326..2364622)       PHAGE_Strept_SV1_NC_018848: putative head assembly protein; O159_25340; phage(gi410491724)     1.39e-07            MVTSPVFGFAVSRWRGLREEFEVVRQAAYVVAEEETRGAMLNAWGRRLGIDPYSLFLGPAARAYAYASAELVEHWRTHPRPVFQVFEAARFDPDGGVW
complement(2364616..2364936)       hypothetical protein; O159_25350                                                     N/A                 MIAACLERVPDLETPGWLLLLFVVLAWGGYGLLLGERRRARAGRVRAVLVGVLAQSRQHGGADDRELDQDAEHGDQTGRGQDEGEGKGKPGGVDGGHGPRVSGGVW
complement(2364933..2365244)       CinA-like protein; O159_25360                                                        N/A                 MMSMFSRSSTSAEADRRVVVASLRHTARGLDAAADRASTIVAEDQRRRAAAQVRFVAVLVATGGHDGMAGPWLVAGRRLLVGYDRVDMDAIYADRLARREVRR
complement(2365550..2366047)       hypothetical protein; O159_25370                                                     N/A                 MITKYLTRIKRINPREHAITVVFDIETDSHGRKRAAAEIVTADDITDAEVSKHLANVSAQLLAGVDVNPPNAVRETGVAVGRAGHGPTPYGECQCYRADCDWSGPGLVEFSGDALDRVGKMKHGDGEFANGVRVSGGGEGIVMHGPSSSYPGACMCYRADCEVPR
2366537..2366863                   PHAGE_Mycoba_Bipper_NC_031253: hypothetical protein; O159_25380; phage(gi100050)     4.41e-12            MTITTTPGIDALHKRLRMARIGADLEQADISERLGVARNTVSNWETGRSEPSATHFVQWALICGVPLEWLGAINDETPAEAGVSHDGAPRGIRTPNLLIRSQMLYPLS
2366814..2366840                   attR                                                                                 N/A                 GAACCCCCAACCTTCTGATCCGTAGTC
