gi|00000000|ref|CP006999.2|  Campylobacter fetus subsp. venerealis cfvi03/293, complete genome. 1866010, gc%: 33.26%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1084535..1084546                   attL                                                                                 N/A                 TTAAATTTAAAA
complement(1084795..1085433)       PHAGE_Microc_Ma_LMM01_NC_008562: putative site-specific integrase-resolvase; CFVI03293_1059; phage(gi117530307)     3.01e-73            Campylobacterfetussubspvenerealiscfvi03293MSKLLSIGQASKALGVTIQTLRNWDKKGLLKPDELTRGGERRYKLETLKNINKNIVFKNDNLKTIAYARVSSNDQKDDLIRQVQVLELYCSKQGFNYEIIQDLGSGMNYYKKGLTRLLNLILDGEVKRLVLTHKDRLLRFGAELVFAICEAKEVEVIIINKGEENVKFEEELAKDVLEIITVFSARLYGSRSKKNKKLIDEMKEVVNNNVKN
complement(1085688..1086053)       hypothetical protein; CFVI03293_1061                                                 N/A                 Campylobacterfetussubspvenerealiscfvi03293MGGGLKKTVELIEKTFAGVKFISANGYINQAGLYLSFNGLTPLNALCDSAHFSIYFCANSLENDNFAALTQIDELREKVFKLGANLGENLFKNCELIANKDSSLYTYAINFTINLNGEKNE
complement(1086038..1086337)       hypothetical protein; CFVI03293_1062                                                 N/A                 Campylobacterfetussubspvenerealiscfvi03293MEFEKLKESLEARAKASLLNPNEITQEALEFSTNETLEFCKGKEVQSWAVMDFAMTRLKIYLKIELSEADIILLKNACKEIDASKITEGAGGGLLWAAV
complement(1086327..1087262)       PHAGE_Natria_PhiCh1_NC_004084: capsid protein gpE; CFVI03293_1063; phage(gi22091115)     3.23e-06            Campylobacterfetussubspvenerealiscfvi03293MAKNLRELLKATGTINAVDMYSTSTLRPEVSNKIIKTIIDKSDFLSKVTLDKTKKLSKSFDTWNLASGILVRVNSGDKPTNAQRQKIGVSSVLIENKVVQLFAKITQDTLEDNAENPDFENETFDSFATAFSNDLQNLGMIGVKDDYAESKFENLNKGWFTLAKESTKTKKLEHKAASKITDRLIAMVENANEDVLDQSVIIISKKDLIAYNKEIGGKNGGLSILLNKGADNILGVPLIGASFVKSGEYMLTPLKNLIFSIGLDIRRQRWYDNEESSLKYKFEIFCDYQIGVPEWVVLSTTNEADSDGDGV
complement(1087262..1087999)       PHAGE_Lactoc_98201_NC_031064: membrane-associated initiation of head vertex; CFVI03293_1064; phage(gi100034)     7.30e-22            Campylobacterfetussubspvenerealiscfvi03293MAKRLKDIAITHISLVKEGANGKSVIYKSKDALEDYFRSVKIAKNDTEKGIVYGIVYSPDEIDTQGDAASAAEIEKAAFSFMKGLNIKNVDRDHNFKPEGAYICESWIVKSGDPLFPNEKEGSWAVGIKLESDELKEAVKKGDLKALSMAGTAIKEEDDGLLKSILKGFEAILKGFNAEKNIKEGEQLEREKEVAEVIKGLSSIKEKLDELDSLKKDMNELKNELKKSKQENATQTNENDIGGLL
1088131..1089192                   PHAGE_Salmon_Fels_2_NC_010463: portal vertex protein; CFVI03293_1065; phage(gi169936049)     1.45e-19            Campylobacterfetussubspvenerealiscfvi03293MNRFFIEKDAKQSLQIGEETTSTSGIIEPFFSFNQLLEAYYANVYHRRAIKIKAGLLSQIELEDSDLYKFLPPNITPKTFLNIFALNLELYGNAAIEKAGSNSTFFLYNLPANEMRVKKDRSLFQKVGEKINELEGYHFFYYSPNSRYYGEPDYLAALQQILINQKADLYNDKFFDNGARPDLAIVYENAEPSGEQITAFKEFFGNSFRGYNNSHKTLIIYGENSASDKDAKIRFEELGKINDLSFKELKNVARDEIAVAHAIPPRLLGIVQGSALGGSGELSGQLQMFNELEIKPKIELIEQFFANIGIKVVLKAMDTTSFKDDGEIVTTLVGSGILSVQEARSILGWQKNI
1089330..1089341                   attL                                                                                 N/A                 TTTAAAAGGCTT
1089344..1091011                   PHAGE_Rhodov_vB_RhkS_P1_NC_031059: replication and recombination DNA helicase; CFVI03293_1066; phage(gi100033)     1.21e-34            Campylobacterfetussubspvenerealiscfvi03293MLIPISIKVKNAKKRRIVTYTKEFKEECVNLLKSGVSALALAKQTGVSRPTLAKWQKDHQKESLSIENAIKFTKQKIEELSKKININQGHPTSGALIERGASGLASSDNSDDVVMLSELISALAKLENGVKKIKSIKDKPRPMLNLSSPVASELKKRILEKGNLYGYQKEFLQSDDSFRIVLKSRQIGFSYVSSADALIGAVAGRNQLFLSASEEQALILMRYLRKWASEFGVEFAKDSEHEITLPNGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAIKGRLTILSTPFEERSLFHELYSDESKYYMFKRFCVSIYSAIEDGLDFDLETMRNLFDADTWASAYECQFVDDESSLLSIALIKSCVYDKASYYTPKSNQVIYAGYDIGRVSDRSTLAGVVLEDVTNRARGQRSLSQGGRYIVAMMDVLAKAKFDEQKEHLTSFLKTYPLSVLKIDKTGIGMNLAENIHDKFRSRVSGVWFSNTRKEEMALNLKKAFEDKLISIPNDPLLIADIHAIKRTIGAKSLNTMPNATNTDTQIGFGL
1091076..1091489                   PHAGE_Mycoba_Athena_NC_041965: hypothetical protein; CFVI03293_1067; phage(gi100027)     3.46e-14            Campylobacterfetussubspvenerealiscfvi03293MKHIFKKFLFRVGDETVGVAKGIAPYKTGNLKKDIVVINVDDKSVTIGNTTLVPYAKFVHYGTKPHIIRVKKAKGLANKKAGLYFGKQVNHPGTKAQPYLENALDNYIKSGGFSKAKNALDAEVKSKVINDIKKAFK
complement(1091798..1092094)       hypothetical protein; CFVI03293_1068                                                 N/A                 Campylobacterfetussubspvenerealiscfvi03293MENRKFNIEYLGVEWFIEAPSYDEDKAKKLKIIAPITSVIDGKIAQIFDILTPQQEDIEEAKKYKEFHEICDFEVLSNGYKFTGTFIDALEYIKANFS
complement(1092070..1093296)       PHAGE_Entero_phiFL1A_NC_013646: phage head protein; CFVI03293_1069; phage(gi281416365)     5.63e-05            Campylobacterfetussubspvenerealiscfvi03293MYDKDLLTKLLKSKIAKSKSKDELIEELLRYLGKENQKALKNAIDELFLMIVTSKDDVNLQSLIENKINALELNIPNINYEEIYSKFASDVVPQLSPRNEAPLSFSFDTTDIKALEVMRKNFYWMKGDYNEKISNELKDITEKVFNGQIPRAEMASALKEKFKGVLSANTSYFEGVSDHIISQMQNIARVNQASKYGVTHYKVVARIDSRTSDICRSMNGRIIPASHIERQSNNIQNAKSISEKKSAAIWRNEPFLGKMLPSNFGLPPYHFRCRTELVPVWIDSEEIDGVTMTSTSPLNKDEVVKHIDKTGIERVLKNNNTHITKKHKESSVKNIVKALNSINTTAPNKDNRYINAFSDNGYFIVFNGNEIVTCYRPNENKKVAFDYFKRRSVYDKKEVIKWKIVNLI
complement(1093289..1093474)       transcriptional regulator; CFVI03293_1070                                            N/A                 Campylobacterfetussubspvenerealiscfvi03293MICPFCANDKTRVVATIKGLENRRFRYCFKCKKTFETSESVLIKELDWQELKEYKEETKDV
complement(1093471..1093908)       hypothetical protein; CFVI03293_1071                                                 N/A                 Campylobacterfetussubspvenerealiscfvi03293MTEKQAMLRKQLLSKIHTAKRYKELKENDAWEMFLDCHFKTTSSSVLSIKELYSCLDLLHGKALEAEEIDTKGRELIARAKKQLSSPNQVDRLKTAMNAIGWSESQLKMFIIKKLKIIADPFKLNVKNTSKIIYILDKIAKGKKQ
complement(1093910..1094359)       hypothetical protein; CFVI03293_1072                                                 N/A                 Campylobacterfetussubspvenerealiscfvi03293MHTLNLLPDIKLKTDRYKLGMGLARAGLKESLHKFIKNVTCEDERLTIVFCHNMAKFEFEQSKEQFLESARVYYKTHARDFKTLNFIPKRIEAKVDYYKKPSKYDPFAITTQLNPPAKKATSQFQNKATNPLVHAGFERLREIIKKQGE
complement(1094487..1094678)       hypothetical protein; CFVI03293_1073                                                 N/A                 Campylobacterfetussubspvenerealiscfvi03293MRSISIDDLDNINNARDFLMMLNAILLGWHKGADEIDIEMIKAACGELYFKSFDHISNLKNIG
complement(1094859..1095959)       PHAGE_Helico_phiHP33_NC_016568: transposase; CFVI03293_1074; phage(gi371671362)      1.53e-113           Campylobacterfetussubspvenerealiscfvi03293MLLTYKYKLYKSKKTKHIDELIDIACSIYNHCIALHKRHYKLYHKSLNKVKLQKHLTKLKKLNKYKKWNNLGSQAIQQITERIDNAYKKFFKKQGGLPSFKKRIKYKSFTLKGSVGYKLEDNVISLNGYDYKFSKNQTINADDKIKTITIKRDNLGSFYICVSLETKDKAHTTTGKSVGIDFGLKTFLTLSDNTSFNSPLIYLKSLKELQSKQRKLSLKKKGSNNRKKAKLELAKFHIKLANQRKDYFFKLSNELAKKYDNIFIEDLNLKAMAKIWGRKINDLAFNEFINILATKTNVIKINKFYPSSKTCSCCGYIKEDLSLKDRIFDCPNCKTKLDRDYNASLNIYRVGASTLRGEFVRPTKVG
complement(1095937..1096392)       PHAGE_Helico_phiHP33_NC_016568: transposase; CFVI03293_1075; phage(gi371671361)      6.08e-89            Campylobacterfetussubspvenerealiscfvi03293MQKIKYKSNHNIVYSCKYHIIWCPKYRRKVLVGEVEKRLKEIIIQVANELNVEIIEMETDKDHIHILADIDPGFGVMKFIKTAKGRSSRILRDEFAFLKSRLPTLWTNSCFISSVGGAPLEVIKQYIENQQISERPKQKQKWKNYVANIQI
complement(1096951..1097178)       hypothetical protein; CFVI03293_1076                                                 N/A                 Campylobacterfetussubspvenerealiscfvi03293MSENLIKKTCKELNLTYKQLGELIGYSESALNNASRQDKISEPLKFAINLYLENLKLKEELQDFQTLKRIIQKTL
complement(1097435..1097617)       hypothetical protein; CFVI03293_1077                                                 N/A                 Campylobacterfetussubspvenerealiscfvi03293MSDVKQSKSLSNLALILNDLDEMIEDLSDAISVDDTEEIYENAKAIVEYYQKTKKKLNLD
complement(1097614..1097832)       hypothetical protein; CFVI03293_1078                                                 N/A                 Campylobacterfetussubspvenerealiscfvi03293MLEILNLVALVVGYILLIVASYCAIAIVCMIIYTSITKNFLIEMGDERFELWLDNIKYKRSEYKAKKMREFQ
complement(1097832..1098344)       hypothetical protein; CFVI03293_1079                                                 N/A                 Campylobacterfetussubspvenerealiscfvi03293MTTKEMIEVMEAYERGEEIQCIRSDYCDKDDYWWKDLKEPTWAFDECDYRIKPKRLRRGPKFKVGDKIINKSYCDGGTLSTDDIHTVVELKDDYYITLCDAKLNFKFADENCVNISDCLWFWEVQERESDKWFITYTRCNFTSISEKYEAFFYTNHTPIYSLGARLPKSK
complement(1098400..1098813)       hypothetical protein; CFVI03293_1080                                                 N/A                 Campylobacterfetussubspvenerealiscfvi03293MLVRIGKSETKIHDKSLENAVNEFAYLKHKIDSLNDELKAFKEIIINKASEQLLSSDSLSVNFESLSENKVKVSFGWDVKVSDVDTLAVLLGDKFELLVKAETTYKAEKRLKELALNDDALKECLEIKEKAPSVSLI
complement(1098926..1099270)       putative protein (DUF4406 domain); CFVI03293_1081                                    N/A                 Campylobacterfetussubspvenerealiscfvi03293MEKTMGLVYVASPYAAITAARDENQRRFYAKRIAVSACKKVMRAGHEPISPVLAFCDIYDEKTDREEVMKACLELLSKCSYIYFADSTYSKNSAGMKKEKRYAMELGIAVLELC
complement(1099283..1099528)       hypothetical protein; CFVI03293_1082                                                 N/A                 Campylobacterfetussubspvenerealiscfvi03293MATIEVDVDLYDYMDIDDVICYLEENDISVDSRKRLLETLNLTGVKISEDLIRDHCFEMSEAEAMEYIKWISHYHVISNVA
complement(1099542..1100423)       PHAGE_Haemop_SuMu_NC_019455: phage transposase; CFVI03293_1083; phage(gi418489040)     7.72e-33            Campylobacterfetussubspvenerealiscfvi03293MNKFEDVRSELNAFLEAEQISASSLARSIGVSSAAISNFRKGDYRGDNEGLAKKIKAYLNNQNAKKNEPIEVVAFKEDILKSLDYEMSNFAINEAVNEREIALIYGSAGTGKTTILKEYIKANPNAVFIEATPHTTARSLLYDLCETLKIDAPKGMHDKLKAVARHFLTCNRVILVDEAEHLPLKALEDLRRIHDFSRTPLVLVGTEILLQNLMGRNKELRQLYSRIGAKWIMKGLSKDECKNYFCDEIYEWCGGNFRSSAKLYKKALKLSQYYKVPLDKQVIAKASEMVVLA
complement(1100689..1103268)       PHAGE_Ralsto_RS138_NC_029107: integrase; CFVI03293_1084; phage(gi985760913)          4.03e-17            Campylobacterfetussubspvenerealiscfvi03293MWVDSKTAAAVLGVNLRTLQRKVVDAQKKCQKILTIDTQKIMYQFIFSNRGGTSGKVLQIWLDDEIASFPNDMQNNKGCNNESNFDTRACGILDAKGLQGSSICETRQGEYQSSEAWQNDTGKESASFTKRDESSINDENNITKCNKTGNQTQEKSMDKSCQSRINGDINDTQDKENMGEIRRGVLFDSQRLNADMGVEYMAGDNRSASENADENDIRYAKCSNISNSAMDNNERCGMDELDELDNSKTKWVCGLANNESEATKDKNNELEELFNATNIAEDKKADAYMKAKICKIWLKNKDKKIAKIDAFLSYINSNKMYDKKVSKGLMYDWLRRYENGGIKALVDSRGGNKPLSVELLGYKEKIDELIMASQGKITAYNVYNRFHHTCVQMGLLTHDEFIAKEKYILSYDNINRYVNKWRKENPTTALYIEKGYDGAINSKLGAVGKASWKAKTVNEYVEIDATTLDIFAKKINLDLASEIWKMNKDAFRDFEECKARVEENQKRYTVVGMIDVYSGVCSYVIGKSENIYTVKRCLAKYIAKFGKPITVVGDNGKAFKSHEMQGTFDSLDIEYQAVRAYSGWLKPYIERSWRSFQDNFSQNLAGFIGHSVVQRQAIEFGFSKMERRLKKGEQTNLKRMQLINDLEKLMDDYIDEFMNPRWLDRLGKSPLEAYKMCEDKVLKLSGVVVCARLGKMLTKKVYKKGIMHDNAYYVCAKSFAFDAVKIVPNINNVDEVYIWSGLGEFIGVGTRLNDGDGISPEIAKEARSFSKNKIDKARKAVNKATIINQDSFVEHMQYAKSLRACEDGSAALEYEDELTTKIKIEHKKAKSLKVMSVNLIQSKPKKEINISWEGLVKGK
1105046..1105057                   attR                                                                                 N/A                 TTTAAAAGGCTT
1106156..1106167                   attR                                                                                 N/A                 TTAAATTTAAAA
