gi|00000000|ref|CP007040.1|  Pasteurella multocida subsp. multocida str. HN07, complete genome. 2325026, gc%: 40.34%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
2218477..2218501                   attL                                                                                 N/A                 TTTGGTGCCCCCAACAGGACTTGAA
2218931..2220130                   PHAGE_Entero_phiP27_NC_003356: putative major capsid protein; PMCN07_2009; phage(gi18249904)     6.57e-61            MFKKLLELRQKKAEHAAEMRALLENAEKENRSLNEEESGKFDKLKDLVKQMSEEIERYETVADEERSLGLQGGKPVETGGKAQLSNDELRHYIKTGELRTNTLSTTSKEDGGYSVIPQLDKEVMKRLTDDSVMRQICNVVRLPVGAKEYKKLVSAGGAVVAHGDEGQARNATNAPKLHEVSIALNPIYAYPKTTQEILDFSSIDILGWLTDEISESFTETEEADLTAGDGSKKAKGLLQYTRSTTADKTRTFGELQKMEVASADKIIADTLIDLFYTLHSKYRKNAVWVMSSTTAAALQKLKNKNGDFIWRDGLTVDAPSTLLGRPVYFLETMPASGANKAVIAFGDFKRGYFIVDHETGVRTRPDNLTEPGFYKVHTDKYLGGGVVDSNAIKFIETLA
2220182..2220742                   PHAGE_Clostr_phi3626_NC_003524: putative prohead protease; PMCN07_2010; phage(gi20065968)     9.95e-31            MNKDFEIRSSELSAENEKLIGYVVKWNSPSELMWGEFVEQFAQGAFSETLSSGADVRALFEHDYTKLLGRTQANTLKLEEDSIGLRFELTPPETSLGKDLLVSVKRGDITGMSFGFRAKAESWNFELTPCQRIVTNAELVEITVTSIPAYPESNVQIAQRSMAQAKAKLQPKPTALLDRWAELAEL
2220744..2221955                   PHAGE_Yersin_PY54_NC_005069: portal protein; PMCN07_2011; phage(gi33770511)          1.15e-63            MWPFKKKTEQRSSLTIEELLSYMGVANTGAGEFVTPTTAESLPAVMNAVTVIAEAVAAMPCYLYQLKQDGRERVFDHPVDFLLNEMPNRSQTPYQFKYTMMRHCLLTGNAYAVIEWDKTGQPISLTPYQPSAVNILRNPKGDYIYQITDLNSKVKNYLQDEILHLRHSSLDGFMGRSPIAICRETVGLGIAQQKHGASVMKNGLMASGLITTSEWLDEAKAQKAIKALERYKGAKNAGKTPVLEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSTYSNFSEASRAFLSQTLRPWLTNFEQQLKDALMVDVTRQSKQRYLIEFDTSDLLRTSQNDRFNSYDTAIKAGIMNPNEVRRREGLAPYVGGDEFSQAWKQTVEVKKGGGHGEND
2221939..2222295                   PHAGE_Paenib_Harrison_NC_028746: head-tail adaptor protein; PMCN07_2012; phage(gi971482318)     1.71e-15            MARMIRAGRYNKVITLQKRNYEKERESNTYGHRTPYWEDVATVRASIEPLQGREYFSGPFQLGENITRVRIRYMPEVTRKMRIKYGDKYFDIYSVIDSKEGHRELQLMCKDGEAYGGY
2222282..2222608                   PHAGE_Shigel_SfII_NC_021857: head-tail connector protein; PMCN07_2013; phage(gi526244642)     6.20e-09            MVDINNLIKLQEIKAHLNLADEFDLDDDLLRAYAETALEVAQRHIGKTFGNEETDKTIPFNQSIKVGCLMYIAYLYANREAVTDVANLNPAPMTIKSLWDVYREPCVY
2222794..2222973                   PHAGE_Pseudo_PAJU2_NC_011373: putative endonuclease; PMCN07_2014; phage(gi209552497)     1.32e-08            MCLAQGKYTPATVIDHIKPVENGQADPLFWIESNHQALCRDCHSYKTRVIDKRGYGAKK
2223156..2223524                   PHAGE_Psychr_Psymv2_NC_023734: terminase small subunit; PMCN07_2015; phage(gi593779760)     1.17e-15            MTRKKTYKTPDFLDDIAKSQWKARIKQLSERGDIMPEDLTNLEIYCENYAIWRHSVADLAKNGFVIINSQGTQSRNPALSAKADAEKVMIKMSTLLGFDPVSRKKNPVTIEGVDAIDELLTL
2223524..2225191                   PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; PMCN07_2016; phage(gi100002)     3.34e-97            MSIWHDYAEKVKSGEIIACKKVKLAVERYFQDLINPDYYFDEKIVNQFLAFSRLCPHVKGHLRGKPIILSNWQVFLFANILGFKHTDTGLRKYRSAYIQVARKNAKSTVAAVLANWFLVMEKGQQDIYTAAVSRDQARIVFDDARQMCLLSPPLRKRVQIQQHKLIYPQNNSLMRPLAAKSSTIEGTNPSLAIVDEYHLHADNSVYSALELGQGARPEGLLFAITTAGSNTISACKQHYDYCSQILEGNEKNDSIFILIFELDDESEIDNPDTWIKANPNINQSIPQIDFENTIKKARGIPSEWVEMLTKRFNVWCQGTTPWLSEGSWALCKRDYEESSLLHQDCYMGLDLSSTNDLTSICYTFPQGQKVRLVTRHYLPEYQLNNVANKNRAIYRQWMQQGWLHITEGDCIDYDKIRDDILKDAECFNIKMIGFDVWNATHLRTQLQSAGLDVEPFPQTYQRFSPVAKSAEVLINRQVIEHNGDPILAWALSNVVMETDANANIKPNKKKAANKIDPAIAFLMSFGTYQLEYGDLIFELSEEHQRVLEEFNGVEL
2225188..2225646                   PHAGE_Entero_HK542_NC_019769: hypothetical protein; PMCN07_2017; phage(gi428783353)     3.60e-07            MIKMLGLDKVLKDMDNLEKKFTKQLKKPMRIALNAGAKSLKETIKPLVPVMNVSTNFRQKGTVKNNIRSKTRIAKNAKSGYTVVGVMRPKGQRMARIGENTRDKRDPFYWWMVEFGTKKMTGRHYMEKGGNKGIEKATRVVEERFIQELKKL
2225978..2226814                   hypothetical protein; PMCN07_2018                                                    N/A                 MLHLSFTQEISNLQIAISKFRNDELRYGLVHLEGIINGALCLFENRELEEINLIREFVENILNDGFIEYKEYALSEALEEDDDDLGEFTINEYGMIQTENSELLMKKYLWFDYSDEEELLFNTVNREDEPDIGRIFTEYKNLTNIKRYELYGALSLNFIYKLLENYNCLSDVINISLKATKAMISATLIKSNSNEFRIENIKNIENNALKTRAKLGALKRHEPYKKVKALVLTEYKTMFRDKTSRGIQPISKDRFADKMAEKYSQVTRDTIRKWLKGQ
2226970..2227173                   PHAGE_Stenot_S1_NC_011589: putative repressor protein; PMCN07_2019; phage(gi213163928)     7.21e-05            MSEAQTLSQKLIAGKEVTKIVGFGRTKLNLLVKAGKFPQPIRFSDNFIRWDLEEVNAWIEQQKASRT
2227266..2228255                   PHAGE_Entero_N15_NC_001901: gp32; PMCN07_2020; phage(gi9630502)                      3.55e-06            MNLININSIEYENYFNYSLLDFSNFALQASITQDEKLVFSPLAFSTSTALSICWISSWGNLIPFFKDLLFLFPVAIETSFLNCTHTLTEKMEKKKLTWAHTLIYYQSMVCVHLYFSKYKKQTPKSVGALLSVLTNNLTKDKTMANLNYTGFTYIFIGILRTDLSNQLHKLRIPAESELQARKQLARDYVLVFAGKIPVKTEEGLSIVGNRCSIQGTTTKDGSRSRYSSGIFLPQIYLSKGNGAYPHTFQKAEFVEWLIRRNKPSNWTNKASRSFAVVETISHPTKGRNLLLTKQKRNPTMKTSQKSTALLAVRSRTPIVFTPAMEVNHA
2228248..2228463                   hypothetical protein; PMCN07_2021                                                    N/A                 MRKSKNVKAFKPEYQPSFEQLAKAVEKTEFYLSFAKDYIRNGHFKGTADALKAIKKEVTQGLKENKGGKHA
2228456..2228776                   hypothetical protein; PMCN07_2022                                                    N/A                 MRKYSVITYREDETVEGQPFIIATGKTYQEAAKIAREAMDNDPLVYGSTLRVERSSYEITVFDKQGEIAFTGEYPTYAQACEVSDYLKSTNLYSEIRISNLDGLGE
2228782..2229207                   hypothetical protein; PMCN07_2023                                                    N/A                 MNKDLDKPMDYSKCNAIEIKAISIASQKLGLEYPYFGEALNVLAEEFSKFPLESLNGLKILHDELGTINKHLLKMAPKPPSLDPEEMVKVLTNDEIIDGLLKHGVINSLVNTFLYFQENISMRIAELENGISTEGVNEQIN
2229191..2230972                   PHAGE_Entero_P4_NC_001609: DNA primase; PMCN07_2024; phage(gi9627512)                1.85e-87            MSKLTKAPHLKEQPKDFMNDLIVLVGESAWNAWNKGKGTEWLLLCQALQHDSKQKPVILGEKQLEGISQIRIAHPEQQYIRLIQFGELSREEITALCLNIAKNTKAKVILLCDMLGQTVENLSQYIERLRNDSDVAESAEIVSKATESTPKIKENDRTNEKARAFTQWLGLDLALQRGSREIYHYDNQAWHKLELEDIEEKAVHFFDKNELGYSDRTINSLLNTLKAQLPRMGDQANEFIAFNNGVLNRNTLAFEPHNRNHWLTSYIPHDYDEHAQNTPHFDDWLSFVANGCEKKQRNILAALYAILTNRYNWQIFFELTGKGGSGKSVFAHIATLLAGEQNTISAKLEDFDNAKDLEGFENKTLILCPEQSKYAGEGGGLKAISGGDLLRVNPKHKKPFFTKITALIMLINNEPCRFTERAGGVDRRRVIFDFQRVVPDEKKDPDFINKVTLEAGGIIRKVLNAFTQPEEAKKALNDQMNSKEALAVKMESDVLTAFFNYFFTSRTLDGLYIGSRAMGDNRIQTHLYPAYLAYAAAYNLKELGLNSFVAGIEQAIKQHGNEHPFRKRRNNDGMRTNIHFKNFNDFFTDVIKR
complement(2231146..2232345)       PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; PMCN07_2025; phage(gi16130540)     4.43e-109           MPKITKPLTNTEVEKAKPQAKEYTLTDGYGLFLLILPSGIKSWRFNYARPITQKRTKISLGIYPAVSLAQARAKREEYRALLAQGIDPQEHKEQEQKAAITKIENSLLFIAERWKAKKAQEVEALTLKKNWRRMETYLFSSMGNMPINEIVPKIAIEALEPLYNQGKGDTLRRVIRLLNEVLNFAVNYGLIPFNPCLQINEVFSFGKSNNNPAISPKELPELIKTVMYSSVAIQTKLLFQFQLLTMVRPSEASNATWSEIDLEKALWTIPAKRMKKRNPFVIPLSSQAIAILDKMKSISPKSEYVFQSWIKSNQPMSSQTINKMLSDLGYKDKQTAHGLRTIGRTYLAEQRIDYEVAEMCISHKTGTQTGKIYDRADFLEQRKPVMQLWGDYVEKCSPK
2232543..2232567                   attR                                                                                 N/A                 TTTGGTGCCCCCAACAGGACTTGAA
