gi|764057510|ref|CP007235.1|  Salmonella enterica subsp. enterica serovar Typhimurium str. 4856450, gc%: 52.20%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(334268..334909)         PHAGE_Salmon_SJ46_NC_031129: baseplate hub subunit; AX02_3120; phage(gi100101)       1.35e-37            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRP
complement(335269..335457)         inner membrane protein; AX02_3130                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MEEEKIKLLHCLLFSISKKGNGLREYWRHEIIRSNEFLLYRLLMQANNNRRRNFFILVASGK
complement(335645..336100)         PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; AX02_3140; phage(gi418489075)     2.37e-28            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSQTTVWLACYKGRSEHRGIARFADWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEVFFRKHNGKRYDWQGALGIALYNRERKDRLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
complement(336097..336702)         bacteriophage protein; AX02_3150                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTQYAYYHPATFEVIDWIDTSSLNVVLPDSVISIDDEQWRLRDKNCWVCLNPLEFITTPPPGKFYRLQGNEWVYDEALFVSALESVKAQVIQAIKAHRDDVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAQQIPAGLMWQAKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALEDIEAVLDYDYSTGWQP
complement(336707..338452)         PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; AX02_3160; phage(gi526003631)     3.56e-85            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MDNEFYTLLTDRGMAKIASALADKKQLHLQKMAVGDGGGQYYEPIASQTKLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQVTGVPDGTLAQKGIVKLNNATDSTSTTEAATPSAVKAAMDKASAAAPARHTHAWGQITGAPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAYDKASAAAPANHSHYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGHTSNTDGLLYCSGGNAGKSGEPEIAIVPVIAGNNYPVTVGAGGASGAGGVLPNSNPTGNVVQVGQAGNSGINGGNSIFIDVVANGGAGGAGGIVQSRIPLSGFNQLDSISGGNAETTFFGKGGTGAVLSNGSNASGYGAGGGGGASVNSLNIALSGYAGGRGSSGFVKISW
complement(338455..339087)         PHAGE_Burkho_BcepMu_NC_005882: gp51; AX02_3170; phage(gi48696961)                    5.82e-32            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAEQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
complement(339080..340195)         PHAGE_Burkho_BcepMu_NC_005882: gp50; AX02_3180; phage(gi48696960)                    2.60e-132           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
complement(340186..340500)         PHAGE_Burkho_BcepMu_NC_005882: gp49; AX02_3190; phage(gi48696959)                    4.86e-38            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
340606..340728                     hypothetical protein; AX02_3200                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAGSECVLPGGASALTGPVLMHILLNGEDRVLRKVKMKLL
complement(340709..342256)         PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; AX02_3210; phage(gi221328637)     7.59e-62            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
complement(342256..343185)         PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; AX02_3220; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
complement(343182..343439)         PHAGE_Entero_SfV_NC_003444: putative flippase; AX02_3230; phage(gi19549013)          1.25e-39            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MANVAGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
complement(343738..343863)         hypothetical protein; AX02_3240                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLLDGGFALSSLQKVHKHRPGKRRSATGQIAGGYLFSAQRD
complement(343872..344594)         PHAGE_Burkho_BcepMu_NC_005882: gp48; AX02_3250; phage(gi48696958)                    3.31e-38            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
complement(344604..345647)         PHAGE_Burkho_BcepMu_NC_005882: tail protein; AX02_3260; phage(gi48696957)            2.05e-101           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSTGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDVSHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSLMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
complement(345635..345844)         PHAGE_Burkho_BcepMu_NC_005882: gp46; AX02_3270; phage(gi48696956)                    6.98e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPELPPWLR
complement(345844..346797)         PHAGE_Burkho_BcepMu_NC_005882: gp45; AX02_3280; phage(gi48696955)                    5.01e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVNDSWFDELLSVVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTMSSIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
complement(346797..349151)         PHAGE_Burkho_BcepMu_NC_005882: gp44; AX02_3290; phage(gi48696954)                    7.55e-61            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKVTRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSTAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQIAMKNAPDAGAAAANFDHFLKSAFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMTHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMVEKFNLGAMFGDAQTRDFLAPMLANMDEYRQLKASAMQAAGQHVIDDDFAAKMTSPGEQTKALQLSLNDLWLTVGLELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVSVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKSLTMLLGNGLIKGLRLVGQTFIWLGRALLMNPVGLTITAIASAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFAGVLDWFGIELPASFSEFGGNILDSLINGILNALPFLSGAIEKIKALIPDWAKSALGISAEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPVKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
complement(349248..349376)         hypothetical protein; AX02_3300                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
complement(349336..349653)         PHAGE_Burkho_BcepMu_NC_005882: gp41; AX02_3310; phage(gi48696951)                    1.91e-10            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQSMLSMATEPTATVAGNGAAGEVVSLSAQ
complement(349705..350229)         PHAGE_Burkho_BcepMu_NC_005882: gp40; AX02_3320; phage(gi48696950)                    6.46e-90            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
complement(350229..351656)         PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; AX02_3330; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAANYLHGIETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
complement(351646..351843)         PHAGE_Burkho_BcepMu_NC_005882: gp38; AX02_3340; phage(gi48696948)                    2.55e-11            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
complement(351840..352295)         PHAGE_Burkho_BcepMu_NC_005882: gp37; AX02_3350; phage(gi48696947)                    3.09e-15            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899METLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
complement(352455..352769)         PHAGE_Burkho_BcepMu_NC_005882: gp25; AX02_3360; phage(gi48696935)                    1.58e-29            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEAGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
complement(352782..353387)         PHAGE_Pseudo_B3_NC_006548: endolysin; AX02_3370; phage(gi56692593)                   4.19e-73            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MRYQYVCLVCAMTFLSADAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSPAGAQGMAQFMPATAKWVSQLYPELHENKPFNPAWAIRALVQYDRQLWKSVLAKNSCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGQASCIH
complement(353390..353677)         PHAGE_Burkho_BcepMu_NC_005882: gp21; AX02_3380; phage(gi48696931)                    3.91e-14            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MRKIIVPRLSGWLVASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
353904..354035                     hypothetical protein; AX02_3390                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MIKIILLIFKVSLKIHAIVRKAIFLIERRKKCKKLTVYAYSIV
354253..354600                     PHAGE_Burkho_BcepMu_NC_005882: gp01; AX02_3400; phage(gi48696911)                    2.55e-30            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML

#### region 2 ####
1750494..1752440                   PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; AX02_16650; phage(gi371496158)       2.75e-46            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTALLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAQEKKREQGVDAAVVNTAPGWRQFASSFREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE
1750620..1750634                   attL                                                                                 N/A                 TCCGGTTCTGGAAAA
complement(1752570..1752791)       PHAGE_Lactoc_bIL312_NC_002671: Csp; AX02_16660; phage(gi13095918)                    1.92e-18            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPIEAEAVA
1753115..1753435                   PHAGE_Pectob_CBB_NC_041878: putative major capsid protein; AX02_16670; phage(gi100319)     4.84e-08            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGKTNDWLDFDQLVEDSVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
1753499..1755742                   PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; AX02_16680; phage(gi100292)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDIVNFISHGTRKDEPSQSSDLGNQPTGDEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMGEIKKVFTPEFRNRLDNIIWFDHLSGEVIHQVVDKFIVELQAQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNALTYDFQSAQKHKPEAAH
1755934..1756392                   PHAGE_Hypert_2_NC_014321: IS element Dka2 orfA; AX02_16690; phage(gi300116744)       1.70e-18            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
complement(1756855..1757538)       PROPHAGE_Escher_CFT073: transposase insF; AX02_16700; phage(gi26249410)              2.94e-37            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEPEQVWVADITYLPLRSGTACLSLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNALAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD
1771555..1771569                   attR                                                                                 N/A                 TCCGGTTCTGGAAAA

#### region 3 ####
complement(1827633..1828835)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; AX02_17280; phage(gi100242)     2.14e-49            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLLEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS
1828981..1828995                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1829030..1830415)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; AX02_17290; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MDRGAEKKSTRCEDNMKSCTLVNAPGRQEGLMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALFRYAPSLPQSMVAAQ
complement(1830367..1830615)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; AX02_17300; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
complement(1830656..1830862)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AX02_17310; phage(gi169257270)     1.75e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1830938..1832047)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; AX02_17320; phage(gi169257271)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
complement(1832058..1834943)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; AX02_17330; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEDDLGTGKEAVTVENQNQAEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNVTLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
complement(1835391..1835549)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AX02_17340; phage(gi169257274)     1.88e-31            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLKQCGYCRKSIDEGKEVKNTLLYRNGSQLASKEKEYCSRQCAEYDQMAHES
1835671..1835817                   hypothetical protein; AX02_17350                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MPYRRPAERFTPDNDALVVDETNDKTKGSICKAKSATKSSILEHKNST
complement(1835852..1836058)       PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; AX02_17360; phage(gi169257276)     1.94e-41            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MEPGDESEGERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNNVFDLINDLKK
1836755..1836961                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; AX02_17370; phage(gi169257278)     1.58e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1837046..1838029                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; AX02_17380; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
1838032..1838781                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; AX02_17390; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
1838792..1839139                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AX02_17400; phage(gi169257281)     7.30e-80            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MARPKTQSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
1839262..1839447                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; AX02_17410; phage(gi169257282)     2.77e-35            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTLAHTVEKRDAEFIAAANPATVLALLDVLYEFGEDEVAISEYVTNLEDALRVAAAPQQEE
1839664..1839816                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AX02_17420; phage(gi169257283)     1.06e-28            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MEFKDTRGDVFYAYNYAYSGKKPSNDEIYKAIDELKPIGEKFEMSKTISD
1840108..1840341                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; AX02_17430; phage(gi169257284)     4.88e-51            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MRIELVISRAKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
1840757..1841359                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AX02_17440; phage(gi169257286)     2.56e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
1841359..1841565                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AX02_17450; phage(gi169257287)     1.48e-44            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAMKYSWFHHHDCTTEQADTLISDYQKRGVRTEKSLNPDFITWTVSAKLPEYAHRVRTPKSLRQKVWG
1841562..1842179                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; AX02_17460; phage(gi169257288)                  1.26e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1842312..1843109                   PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; AX02_17470; phage(gi169257290)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHGALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
complement(1844738..1845211)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; AX02_17480; phage(gi169257294)     1.82e-112           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1845781..1846029                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; AX02_17490; phage(gi169257295)     2.08e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1846001..1846465                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; AX02_17500; phage(gi169257296)     3.04e-107           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQGLMMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1846462..1846962                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; AX02_17510; phage(gi169257297)     9.14e-115           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MMFNWKTMFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
1847107..1847703                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AX02_17520; phage(gi169257298)     5.35e-127           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MVRFLFDTERHFHRIQEKSTTVDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILPDLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAINGDDDDNGDEGQEEEQE
1847765..1849798                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; AX02_17530; phage(gi169257299)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKISDAVRKYMRVPRDAGNSVAWESTLTPYVVEAMNCLSSRSYDAVVFVAPARTGKTLGLIDGWISYNIVCDPSDMLVVQMTQDKAQEHSKRRLAKMFRHSPAIARRLSPHRNDNNVHDKTFRDGSFLKIGWPSINVFSSSDFKCVALTDYDRFPEDVDGEGDAFSLASKRTTTFMSLGMTLVESSPGREITDTRWKPSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGEYFQPSMANMTGYRHIADPMEASEAARIQCPHCHKLTEPQQKRELNNRGVWLREGQHIDRDGNITGEARRSRIASFWMEGPAAAYQTWAQLVYKLLTAEEEYERTGSEETLKAVINTDWGLPYQSRRSLEARSGDALMARAEDVSKRTVSDGVRFIVATVDVQGGKKRRFVVQVVGYGAYGERWIIDRYNIRYSLRVNEDGESQPVNPAARPEDWDLLKTDVLEKTYPLAADPEQFMPVLAMAVDSGGEDGVTDNAYAFWRRCKRKGVAGRVYLFKGDSTRREKLITKTYPDNTERSERRAKARGDVPLYLLQTNALKDRVAAALEREEPGANYIHFPDWLGPWFYEELTYEERSADGKWKKPGRGNNEALDLMCYAHALAILRGYERINWEKPPGWARLPEKDAAKTTQPVEVRQQEQHEGGEKAVKARKKKILPAWGGGSGGGWL
1849795..1850001                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; AX02_17540; phage(gi169257300)     1.38e-41            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTRAGLQELYNAYLEAELAVLKGKSIMLNGQSMTMESLEEIRKGRREIEDRLQRLNNPRRLFTRARLS
1849998..1851545                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage portal protein; AX02_17550; phage(gi169257301)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNFIDKAISMMSPGWAVSRLRSRAVIKAYEAAIPTRTHKIKRENRNANQLNQIAGKSLREQARWFDNNHDLVVGALDKMEERVIGAKGIIVEPQPLTVAGTLNNALAEQIRARWAEWSVSPDVTGQYTRPVLERLLLRTWLRDGEVFSQMVAGKMPGLEPVAGVPFWLEAMEPDYVPMEQTDSTNNLIQGIYFNDWQRPKSYIVCKSWPGFATAMVATKLIDAENMLHLKFTRRLNQARGVTLLAPVIIRLLDLKEYEDSERLAARISAAFAMFIRRSDAMVQDGDAPDYADKDRDLDIEPGTILKDLLPGEDIGTIKSDRPNANLESFRMGQLRAVAAGVRGSFSSIARNYDGTYSAQRQELVEAQEGYAILQDNFIAAVSRPVYRRWLATAITAGVIDVPTDTDMATLFNAVYSGPVMPWIDPLKEANAWRILIRGGAATESDWVRARGGAPAEVKRRRKAEIDENRKLGLVFDTDPAHDPGEQDNAGSEDNSGGDKNAAGDDSRERTRGGKQ
1851508..1853550                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage Clp protease involved in capsid processing; AX02_17560; phage(gi169257302)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTAGNGRGEGSSNSWYSIRAAANNTAEVRIYDEIGGWGISARWFAEELAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNPIIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLAKETWMSGAECVSEGFADKLIQPVKAMACIHSKRVEEFEHMPQSIKGMIIAPQGNAGAQPQPQAKAPESQIQSQAQSLVTVDENAIRARLQEEQRNRITGIQNVFSLSGDRYASLMAKCIADVDCSLEMAKDRLLAEMAKGITPTNQLNGPQNRAEFHAGMYTGNGNITGDAVRAAVMARAGYEEAQKDNPYNCMTLRELARISLVARGTGVSSMNPMQMIGMAFTHSTSDFGNILLDVANKSILQGWQEAPETFDAWTKKGQLSDFRIAHRVGMGGFSSLRQVREGAEYKYVTTGDKQATIALATYGELFSITRQAIINDDMNMLTDVPMKLGRAAKATIADLVYDVLISNQKLSSDNVALFDKTKHANVLEKAVMDVASLDKARQLMRMQKEGDRHLNIRPAFVLVPTAMESVSNQVIKSVSVKGADINAGIINPVKDFATVIAEPRLDDASQSTFYLTAAKGSDTVEVAYLNGVDEPYIDQQEGFTVDGVTTKVRIDAGVAPVDYRGMVKCTV
1853656..1853964                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; AX02_17570; phage(gi169257303)     6.03e-65            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MEDGKTIEIVATTSLKSGDLVQVGDMFAVAVTDIAAGSAGTGIAEGVFSIPKLTTEDIAVGKKVYLKDNVVQTDATGSLPYVGVVWAPAANGDETVPVKING
1853990..1854256                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; AX02_17580; phage(gi169257304)     1.13e-56            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MDALIAERFGMKVNINGTDCIVVESDFLAELGPVEGNGKNVVVFSGNVIPRRGDRVVLRGSEFTVTRIRRFNGKPQLTLEENNGGKGA
1854237..1854803                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage morphogenesis protein; Lambda gpZ homolog; AX02_17590; phage(gi169257305)     1.52e-134           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPVRTVRRRARVRLARADKPFANIYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRGFIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNTQVVLQMKTEMPKELKHEISYELRRFTKK
1854800..1855201                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; AX02_17600; phage(gi169257306)     6.36e-94            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIWSAVLHVEVFLKATAPDSALDEQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMWGSADLSYDITYSM
1855213..1855962                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage major tail protein; Lambda gpV homolog; AX02_17610; phage(gi169257307)     1.68e-179           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTDTTIPNPLAPVKGANTTFWMYNSEGDPFASPLSDNNWLRLANVKDLQPGELTADAEDNNYLDDENADWKSTTQGQKSAGDTSVTLAWKPGEDVQKKLIQLFTTGQKRGFRIKYPNGTVDVFRGWVSSLGKTVQSKDEIARTVKITSVGRPYMAEEDAPEVVSVTGLTVEPTNATVKVGATTAVTFTVKPDNVTDKSLRIATSDPTTATVTQAENIATVKGVKAGTVKIIGMTTDGNFTAIADITVQA
1856008..1856406                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chaperone; Lambda gpG homolog; AX02_17620; phage(gi169257308)     1.13e-91            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFLKKETFTRGDASVALFELSGLQRIEYLEFIQKRTAKYDTDMDGTTEADKRVAYMQMALEINAWLVSRSLLNGDSSQDADTLYQSVQAKWSYEALDAGAESVLMLSGLSADKKDNASDSGNESEDMTPEKS
1856469..1856732                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein; Lambda gpT homolog; AX02_17630; phage(gi169257309)     8.51e-56            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLDEMSSTELSEWADFFRENSFSDALLDAEFSTLKAQVFMLVTGKEIDAADFSLLTLPGAVQSMTEQDLLEVAVGIPGGVRFEPESR
1856713..1859799                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; AX02_17640; phage(gi169257310)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSQKVGDIVINMDVDTAKVAAGLQTASNGLGKLVDSSDLVEKRIKRCMESSARSVAASAKSISAAMAQSQVATRTQSDAMAQLAREANEARERAVDLNQKLRAEAAQAAVVAQAQDAAAAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSEAAAKTRELTDAEALATQKKAQFIRRLKEQTAVQGLSRTELLRVKAAELGVSSAADVYIRKLDTATKSTHALGLKSAMARREIGVLIGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLVGGVAAAVYGLGKAYYEGAKESEEFNKQLILTGSYAGKTTGKLNEMAKSLAGNGVTQHDAAGVLTQVVGSGAFTGQAVAMVSRTAARMQENVGQSVDETIRQFKRLQDDPVNAAKELDRALHFLTATQLEQIRVLGEQGRTADAAKIAMSAYSEEMNKRAGDVHDNLGWIEKAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARARKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQKTQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKAMARQKEKPKAYYNDEAGRLLLQYSQQQAQTEGLIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNAFNELKKKTLTLTSQLADEESRVRQQHALALATMGMGDQQRGRYEEHLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQELQASLDRRLAEWADYNAKVDAAQGDWTQGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLGMFVFGASAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFARGAAVMGEAGPEAILPLRRGTDGKLGVVAAGSGGMAMFAPQYHIAISNTGPELTPQALKAVYDLGKKAAADFVQQQGRDGGRLSGAYR
1859796..1860128                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; AX02_17650; phage(gi169257311)     1.73e-78            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MMKTFHWKVDPDMGVDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPGLEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVIS
1860227..1860724                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; AX02_17660; phage(gi169257312)     2.92e-113           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1860841..1861146)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; AX02_17670; phage(gi169257313)     2.06e-66            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1861464..1862159                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; AX02_17680; phage(gi169257314)     7.93e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPDADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1862169..1862906                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; AX02_17690; phage(gi169257315)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGLDWWLVCDNRIHKFRCVPHLTGRQFEHGVTDCYTLFRDAYHLAGIDMPDFDREDDWWSQGKSLYLDHLEAAGFYRVNPEDAQPGDVLICCFGSPTPNHAAIYCGNGELLHHIPEQLSKREGYNDKWQRRTHSIWRHRQWCESAFTGIYNDLESASASA
1862966..1863508                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; AX02_17700; phage(gi169257316)     3.66e-127           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNEGWYQVRIAGSDMAPDTLTARLNESLPPGAVVHIVPRMAGAKNGIWQVVAGAALIGASFIPGLNAVAAAVLFSAGTSMALGGVAQMLTPVPKTPTVGQADNGKQNTYFSSLENMVAQGNPVPVLYGEMKIGSRVISQMMSTRDESTSGKVVVIGSPLQANTTSRQDGGITRPSVVIRQ
1863580..1866930                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; AX02_17710; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSKGGGKGHTPREAKDDLKSTQQLSVIDALSEGPIVGPVNGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETTDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIQDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGTGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
1866975..1867211                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AX02_17720; phage(gi169257319)     4.14e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
complement(1867488..1867673)       Side tail fiber protein; AX02_17740                                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSAPVQMPALRRWHSAMPPMPGGQLLPPSPQNAAAPPGGRRLLSWPPENHSGCPALNHRKP
complement(1867681..1868196)       Virulence protein MsgA-like protein; AX02_17730                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MDASDADDEAAVALAAAVLADVAAFVSDVFAAAADAAAAFSDAAAAVADAPASPALEAACVSDVFAAVSDAPARSADVCAAVALAAAAAAESPAAVREASAFASDVFAAAADAAAAVLAVSADAALADASPAFVVAVPALLSADAADEAACVADASAAPAAFTAAVALSDA
1868312..1869703                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AX02_17750; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGATRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTSLNPPPNSYPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHSARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1869703..1870284                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AX02_17760; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
1870760..1871728                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; AX02_17770; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQAEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
1871996..1872244                   PHAGE_Stx2_c_1717_NC_011357: transposase; AX02_17780; phage(gi209447153)             2.03e-31            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MEIDNNICENALRCVALGRRNYLFFGSDSSGEAAAIIYSLLGTCKLNDVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(1872376..1873002)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; AX02_17800; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
1872984..1873133                   hypothetical protein; AX02_17790                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQSVHTYETASRQAESIGQGENVARSGNDLQGIYTVIRNENLCIDEFRN
complement(1873355..1874041)       Gifsy-2 prophage protein; AX02_17810                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(1874312..1874503)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; AX02_17820; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
1874809..1874823                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 4 ####
2684632..2684643                   attL                                                                                 N/A                 GTTTTTTCTTTT
2689845..2690174                   PHAGE_Entero_HK022_NC_002166: integrase; AX02_26180; phage(gi9634144)                1.14e-19            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPNSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKLYLDERDNKAYVML
2690309..2690331                   attL                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
2690957..2691085                   hypothetical protein; AX02_26190                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKQTIILAMALINNRSRATYIQRVSELPDGIQPVLFLGLLTG
2691478..2692392                   Protein pagO; AX02_26200                                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNLPVTSRCRDNSSQK
2692531..2692683                   hypothetical protein; AX02_26210                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
2692693..2693307                   inner membrane protein; AX02_26220                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKTHHHPTTFVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
2693795..2693941                   hypothetical protein; AX02_26230                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAHWVLKQWPQLALDAISQITFQMDNKHSSYPVCIGIVKPDVDHLHQG
complement(2694455..2694580)       hypothetical protein; AX02_26240                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
complement(2695447..2696328)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AX02_26250; phage(gi169257321)     4.82e-86            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2696483..2696746)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AX02_26260; phage(gi169257298)     2.87e-21            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
2696801..2696989                   hypothetical protein; AX02_26270                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNKKHTNHHLLKINYIKTESYNMMMMHEKSKMRQIPRRCRPVAGRPAGSTFLKCEQLSTTTT
2697054..2697221                   hypothetical protein; AX02_26280                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(2697478..2698011)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AX02_26290; phage(gi16765210)     1.40e-124           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEAAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
2698326..2698979                   PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; AX02_26300; phage(gi169257272)     6.24e-14            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKQQPTGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEGKQPAAEPEAVTRNADGTFDVSALFLPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
2698997..2699893                   PHAGE_Entero_HK022_NC_002166: integrase; AX02_26310; phage(gi9634144)                5.83e-84            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MALIEKLKGTDSFTVSAWIDRYEVLLQRRNLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
2700024..2700046                   attR                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
complement(2700267..2700620)       PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; AX02_26320; phage(gi971764937)     9.60e-12            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
complement(2700637..2701461)       Inner membrane protein YebZ; AX02_26330                                              N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MMLVYGCALYGAWLAPASIRRLMTRRFLHLQQHAAAWSVISAAFMLAVQGGLMGGGWPDVFFVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
complement(2701513..2701893)       Copper resistance protein CopC; AX02_26340                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2702025..2702255                   PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; AX02_26350; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
2702363..2703019                   protein yobB; AX02_26360                                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWNESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
2703043..2703741                   PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; AX02_26370; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
2705831..2705842                   attR                                                                                 N/A                 GTTTTTTCTTTT

#### region 5 ####
2810845..2810856                   attL                                                                                 N/A                 CTAAAATCTGGC
complement(2811037..2811249)       PHAGE_Lactoc_bIL312_NC_002671: Csp; AX02_27550; phage(gi13095918)                    1.74e-21            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGPSAVNVVAL
complement(2811704..2812972)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; AX02_27560; phage(gi399528790)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYFKQKERFRRSGVVCFSSNYELYADMSNRVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTDGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEFAPAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSRDIINAAVKCLDKIWRDGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQWAMKREMLSPRYTTRYSDLLRVK
complement(2812975..2813214)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: errror-prone repair protein UmuD; AX02_27570; phage(gi399528789)     3.86e-41            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MIEAGISDGDLLVVDSSRNADHGDIVIAAIEGEFTVKRLQLRPTVQLIPMNGAYRPIPVGSEDTLDIFGVVTFIIKAVS
complement(2813521..2813682)       hypothetical protein; AX02_27580                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGAGQKINCCEGNALARGDNLRCGTVDAVQKIWPPGWLKYAHMTIQPENLQNP
2814032..2814046                   attL                                                                                 N/A                 CGGTTTTCGAGACCG
complement(2814313..2814534)       PHAGE_Salmon_ST64B_NC_004313: DNA invertase pin protein; AX02_27590; phage(gi23505471)     2.83e-47            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFLLYCRGTGEIGGRRPKLSPEQWAQAGRLIGAGIPRQQVAIIYDVGLSIHGLYWILLSANRKGVKKRDYRAN
2814747..2815754                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27600; phage(gi23505470)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFSRVRGFLSCQNYSHTATPAITLPSSGSANFAGVEYPLLPLDQHTPLLFQWFERNPSRFGENQIPIINTQQNPYLNNIINAAIIEKERTIGVLVDGNFSAGQKKALAKLEKQYENIKVIYNSDLDYSMYDKKLSDIYLENIAKIEAQPANVRDEYLLGEIKKSLNEVLKNNPEESLVSSHDKRLGHVRFDFYRNLFLLKGSNAFLEAGKHGCHHLQPGGGCIYLDADMLLTGKLGTLYLPDGIAVHVSRKGNSMSLENGIIAVNRSEHPALKKGLEIMHSKPYGDPYIDGVCGGLRHYFNCSIRHNYEEFCNFIEFKHEHIFMDTSSLTISSWR
complement(2816039..2816608)       PHAGE_Salmon_ST64B_NC_004313: Probable tail fiber assembly protein; AX02_27610; phage(gi23505469)     1.45e-138           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKKYQNIKNFRLIDAPVNRDKTQAEINIGAYFLESDDGQDWYECQSLFSDDTAKIMYDHEGVIWGVVNKPVPQRGNTYSVSMLWPVNMSVAEIDAADCPDDCRGDGTWLYQDGKVVQRGYSPEELRKKAEAEKVRRLAEAESAIAPLARAVKLKIATDEEIKRLEAWELYSVMVNRVDTSAPDWPDIPR
complement(2816608..2818170)       PHAGE_Salmon_ST64B_NC_004313: tail protein; AX02_27620; phage(gi23505468)            0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPSAANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTLFNSLMKPTAGDVEALSVNGGRLNGPLGIGTDNALGGNSIVFGDNDTGFKWHSDGVLGIYANNALVGYIDNSGLHMSVDVLTNGAVRAGNAKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRAGGAIYQNNGDIFGSLWGNGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDYQGENIDGINYAPLQKRVGSQWYTVQGGTV
complement(2818157..2818744)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; AX02_27630; phage(gi23505467)     7.68e-145           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MALQDEYTQLLYHLLPEGPAWDGENPLIEGLAPSLNRVHQRADELMAEIDPARTTELIDRYEQLYGLPDSCAPEGVQTLQQRQQRLDAKANVAGGINERFYREQLDALGYTAATIEQFQNLDSTPDPEWGEFWRYYWRVNIPADANISWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
complement(2818747..2819268)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; AX02_27640; phage(gi23505466)     2.91e-122           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MERYYWIPQGGADPDYVIWAKEIAGITRAWTFRHYKGTGTVGVMVATSNPVNPAPGDDLVKAVRDHILPLAPVAGGGLFVFAATEKSIPVTVALAKDTPEIRTAIIAELNALMLRDGAPSGKIYVSRISEAISLATGEVAHQLRVPAADVVLGKTELPVLGNITWATYTGENG
complement(2819303..2819827)       PHAGE_Salmon_ST64B_NC_004313: putative head assembly protein; AX02_27650; phage(gi23505465)     4.09e-125           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MADSQFARPELPQLIATIRSDLLTRFQQDVVLRRMDAEVYSRVQAAAVHTLYGYIDYLARNMLPDMCDEDWLYRHARIKRCPRKNAVSAKGFARWDGIAGTPEIPAGTQIQRDDQVTFTTLQTVKASGGLLRVPVIADVAGTAGNTDDGTALRLGTPITGIPSTGYADTLTGGG
complement(2819820..2820233)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; AX02_27660; phage(gi23505464)     3.87e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MILYVNGIRKDATASLDFLTRAVVISLFTWRRAERDDRTPQPYGWWGDTWPAVQNDRIGSRLYLLKRRKLTNKTPQDAREYMQQALAWMTDDGVAARIDVTSERTGTDTLAAGVTIYQRDGVIHNITFDDIWSKLNG
complement(2820238..2820771)       PHAGE_Salmon_ST64B_NC_004313: putative base plate assembly protein; AX02_27670; phage(gi23505463)     2.39e-129           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MANHPLQNMITRAVITAIDTVRKCQTAGLKLIAGEKKENVEHLEPYGFTSAAQNGAEAVVLFPGGDRSHGVAVVVADRRFRLKGLARGEVALYDDQGQSVTLTRAGIVVNGGGKPVIFTNATKARFEMPIESTGDIRDNCDSSGKTMAEMRTTYNGHTHKENGDGGGITDKPGQPMS
complement(2820771..2821829)       PHAGE_Salmon_ST64B_NC_004313: Tail protein; AX02_27680; phage(gi23505462)            0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNNTVFLRVNGRDWGGWTSVRISAGIDRIARDFNVSITRQWPGGEDVPPVKNGDSVEVLIGDDLVITGWVEALPLRYDAQTIMTGIVGRSKTADLIDCSASPAQHNGENLFLIASALARPFGVDVVDAGAPAAAVIEAQPEHGETVVDCLNRLLGQAQALAYDDERGRLVLGRPGSMKAATALVLGENILSCDTERSVRERFSSYLVTGQRPGTDDDFGEATIAAIRQSTGDAGVTRYRPHTIQQSGTATTDSCKSRCEFEARQRAAKTLETTYTVQGWRQGNGELWKPNQAVVVYDPLNGFDNETLVIAEVTYSQDNNGTLTEIRVGPADAYLPEPFRPKAKKKVSEEADF
complement(2821826..2823166)       PHAGE_Salmon_ST64B_NC_004313: tail/DNA circulation protein; AX02_27690; phage(gi23505461)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAFFSSTGWRGRLRDASFRGVPFSVEDDESTFGRRVQVHEYPNRDKPWTEDLGRATRRLTINAYLVGDDYADRRDRLIGAIETAGPGTLVHPQYGEMQGSIDGQVRITHSSTEGRMCRVSFQFVESGELSFPVAGMATAKRLETSGGLFDDAIDSMFSTFSLSGISDFIQNDVIADAASMLGDVADAFRMVDSGVSAAMRLLQGDLSVILMPPGAASDFVNALQKAWRSGDRLRGSTSDLVTMIKTMSGITLDPGLSPRGTWPTDSGSAAKQKMQRNMIAAAIRTTAISTAVHAVTTLKQPRDVPGVRGVNQPAGTGRDSDIITVMHPALDGVQTVSNGSSPPNYEDLKAIRTALNAAIDQEQLRIRDDVLFQQISVMRTDLNRDISARLAQVERTALRTPDDVLPALVLAAAWYDDAGRESDILTRNPVPHPGFIPVEPLRVPVR
complement(2823200..2825128)       PHAGE_Salmon_ST64B_NC_004313: tail protein; AX02_27700; phage(gi23505460)            0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MADSFQLKAIITAVDQLSGPLKGMQRELKGFQKEMAGLAIGAAAAGTAVLGALALPVNAAIGFESKMADIRKVVDGLDDKKAFAQMSDDILTLSTQLPMAAEGIAEIVAAGGQAGIARGDLMQFANDAVKMGVAFDTTAEESGQMMAQWRTAFRLTQEDVVVLADKINYLGNTGPANAKKISDIVTRIGPLGGVAGVASGEIAAMGATIAGMGVESEIASTGIKNFMLSLTAGNSATKAQKQAMAFLKLNPRKLAEDMQKDSRGAMLKVLDSLAKVPKAKQAAVMNALFGKESLSAIAPLLTNLDLLRTNFDRVADAQEYGGSMQKEYASRAATTENQLVLLKNSVNAISVTLGDTFLPAINEAAEAVMPYLEQLRTFVRANPELVQSAAKFGAALLAVGVSIGSLSRAVKILNSVINLSPAKVAIAALVAGAMLIIENWDDVAPVIKAVWQEVDNVAQEMGGWETVIEGVGLVMAGSFTVRTIGALQQSVLLAGRLSGLLGKIGRMGAMTLTIGVAVSLFKELKDLEQGAKDAGMDAGAFAVQKLQTKERERGYNGFIPRLKELLGMDTPIPQGRYQPYVPLTRRSGVLERAVPPSTQRSELKVTFENAPQGMRVTDIPKSGNPLMNISHDVGYSPFRTSR
complement(2825213..2825524)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27710; phage(gi23505501)     4.35e-70            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLKKPIMAHNEKLHVLELREPSYDEIEAIGFPFTVSGDGGVRLDSSVALKYIPVLAGIPRSSAAQLAKLDIFKACMLILNFFTRSETEEDSESGSTTPHTSGE
complement(2825536..2825892)       PHAGE_Salmon_ST64B_NC_004313: Tail tube protein; AX02_27720; phage(gi23505459)       2.31e-83            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGKIAGTTYFKIDGQQLSVTGGIEVPMNTKVRDDVIGLDGSVDYKETSRAPYTKVTAKVPKNFPVDKITSSDVMTITSELANGQVYVLSNAWLHGEANHNPEEGTVDLEFHGEEGFYQ
complement(2825892..2827388)       PHAGE_Salmon_ST64B_NC_004313: Tail Sheath protein; AX02_27730; phage(gi23505458)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAISFNSIPSDTRVPLFYAEMDNSAANTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICGAGSQLARMVGAYRKTDPFGELYVIAVPESTGAAATVALTVTGEATETGTVNVYTGRTRVQAPVTSGDDAAAVAVSIKDAVNANPDLPFTATSEAGVVTLTARHKGLYGNEIPVTLNYYGFGGGEVLPAGVNITVASGVKGAGAPALNDAVAAMGDEPFDYIGLPFNDTASVNSMATEMNDSSGRWSYVRQLYGHVYTAKTGTLSELVAAGDQFNLQHITLAGYEKDTQTPADELAASRTARAAVFIRNDPARPTQTGELVDMLPAPKGKRFTTTEQQTLLSHGVATAYVESGVLRIQRDITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGSGQAIVTPAVIRGELGSTYRQMEREGIVENFDLFQQHLIVERNANDSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSEEAA
complement(2827378..2827542)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27740; phage(gi23505457)     1.90e-32            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFVKPAKGRSVPDPARGDLLPEGGRNVDENNYWLRREAAGDVRRTNKKVKTNGD
complement(2827546..2828046)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27750; phage(gi23505456)     5.88e-119           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGGAAQFKAIPEAGKLRLPAAYVVPAEDVTGEQKSQTDYWQDLTEGFSVIVVLSNERDEKGQWASYDAVHDVRQEIWKALLGWEPDSQVHEIQYAGGMLLDLNRHELYYQFDFTVKYEITETDTRQQDDLDGLPDLKTLSIDVDFIEPGTGPDGDIEHHTEITFQE
complement(2828103..2828615)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27760; phage(gi23505455)     4.71e-121           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MPQKAYLHVDFVQPEELVFNRARMRRAFVKIGQVHMRDARRLVMKRGRSKPGENPSYRTGQLARSIGYYVPRASKKRPGLMVKIAPNQKNGEGNRHINGAFYPAFLFYGVRRGAKRKKGHHRGASGGSGWRVEPRNNYMTEVLDKRRSWTRYVLSRELRKSLRPQRRKKK
complement(2828587..2828991)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27770; phage(gi23505454)     9.25e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKIRQAQTSATYLLPDPGELDQRIVIRRRVDVPADDFGVTPTYPEQIRTWAKKAQPGAAAYQGSVQIENRVTHYFTIRFRRGITADHEVLHDDISYRVKRVRDLNGKRRFLLIECEALGTDNGSDYAAESIFTR
complement(2828988..2829299)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27780; phage(gi23505453)     5.63e-70            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MEEIKAQLRLDEDFEADERYLQLLARAVQKRTETYLNRKLYAPDETIPDSDPDGLLLQDDIRLGMLMLISHFYENRSSVTEVEKLDMPQSFGWLVGPYRYFPQ
complement(2829314..2829514)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27790; phage(gi23505452)     9.95e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MILKQDLKWSPDGLRVEIIRAGEHDDRILPARVQEIALQTGLAECETSAKSNKAVKEKKSTTSQEG
complement(2829565..2830770)       PHAGE_Salmon_ST64B_NC_004313: Major capsid protein precursor; AX02_27800; phage(gi23505451)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAVDIKDVEQVAQELQQKFDDFKAKNDKRVEAIEQEKGKLAGQVETLNGKLSELENLKSDLEKELLELKRPARGAQNKVAAEHKDAFVGFLRKGREDGLRDLERKAFQVGTDEDGGYAVPEELDRSILSLLKDEVVMRQEATVITVGGSDYKKLVNLGGTASGWVGETDTRSQTATSRLGLIEPFMGEIYGNPQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTTGDGTKKPKGFLAYESTEESDKARAFGKLQHIVSGEATAVTADAIIKLIYTLRKAHRTGAKFMMNNNSLFAIRLLKDTEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKRGYTIVDRIGTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAAA
complement(2830785..2831435)       PHAGE_Salmon_ST64B_NC_004313: Pro-head protease; AX02_27810; phage(gi23505450)       3.83e-156           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQTKQRLDVPLSLKSVSDSGEFEGYGSVFGVKDSHDDVVMSGAFAASLREWSDRKALPALLWQHRMDEPIGVYTEMKEDDVGLYVKGRLLIDDDPLAKRAHAHMKAGSLTGLSIGYVLKDWEYDRSKEAFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGEIPEQKKIERVLRDVGLSRTQAKAFMAGGYGALSLRDAEDVGSALNVLKNLNF
complement(2831413..2832654)       PHAGE_Salmon_ST64B_NC_004313: Portal Protein; AX02_27820; phage(gi23505449)          0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVPKLNSSWEPVYQVTFPDGSTDVLSQEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRINTGLVRKSKQGVFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS
complement(2832654..2832836)       PHAGE_Salmon_ST64B_NC_004313: putative integral membrane protein; AX02_27830; phage(gi23505448)     4.87e-35            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCMFWSWLVARYLDRTQQSVGGGK
complement(2832848..2834581)       PHAGE_Salmon_ST64B_NC_004313: Terminase large subunit; AX02_27840; phage(gi23505447)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSRKSYPNVNAANQYARNVVRGKITACQYVIQACQRHIDDMAAEKSKRFRYRFDKDMAEKAAKFIQLLPHTKGEWAFKRMLITLEPWQLFIVCCAFGWVQKGTKLRRFREVYTEIPRKNGKSAISAGVALYCFTCDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPLLVEAFGIEVNASNLNRPEDGARFEPLIGNPGDGASPHCAIVDEYHEHPTDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNNELFGVIYTVDEGDDWTDPKVLEKANPNIGVSVYRDFLLSQQQRAINNARHAGVFKTKHLNVWVAARTAFFNLVSWQNCEDKTLTLELFEGQPCVLAFDLARKLDMNSMARLFTREIDGKTHFYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVEMGFLTVTDGAEVDYRYILEEAKAANKLNPVSESPIDPFGATGLSHDLADENLNPVTIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPIKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
complement(2834578..2835081)       PHAGE_Salmon_ST64B_NC_004313: terminase small subunit; AX02_27850; phage(gi23505446)     1.48e-117           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MPHMAGTAGRSGRRPKPTARKELAGNPGKRALNKEEPVFTPINGVSPPDWFNEEDMPLASVMWELTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIAKEGNTITGAMGGKIKNPELTAKKEQESEMSSTGSMLGLDPSSRQRLIGLAGQKKTSNPFLKMINS
complement(2835198..2835347)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27860; phage(gi23505500)     8.89e-29            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MCLRSGVVREAKTVDHIIPKAHGGTDTDSNLQSLCWPCHKAKTARERLK
complement(2836131..2836301)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27870; phage(gi23505498)     2.20e-33            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MWGVELLAIRYAAWIKPEFEIEVYEVFKTVVRLGVGAMSRLNRIDHIINTETKAIS
complement(2836763..2837248)       PHAGE_Salmon_ST64B_NC_004313: lysis protein; AX02_27880; phage(gi23505497)           6.38e-114           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNLLPVLLKKYWLQLSVTLLIAVLAWTTDHYRDNAIQYKSQRDTASHSLTLANETISDMEVRQRDVAALDARYTKELADAKAENDALRDDVAAGRRRLLVNATCPAVSTGKSTSAARVDNAARPRLADSAQRDYFTLKERVTTMQKQLEGAQDYIRTQCLK
complement(2837245..2837859)       PHAGE_Salmon_ST64B_NC_004313: lytic enzyme (putative glycohydrolase); AX02_27890; phage(gi23505496)     1.43e-151           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNESQFQQAAGISAGLSARWYPHITAAMSEFGITAPLDQAMFIAQVGHESAGFTSLVESFNYSVDGLMKTFGKRLTPYQCEMLGRVDGKQVAHQPQIANLVYGGRMGNKDAGDGWKYRGRGLIQITGLENYTRCGVALKLDLVANPGQLELDRHAARSAAWFFVTRGCLKYSGDLVRVTQIINGGQNGIGDRRERFEKAKSVLV
complement(2837862..2838206)       PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); AX02_27910; phage(gi23505495)     1.43e-56            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKMHFDPHSWDSWIELFQSWWRGDVPIGGVVMAIVVAFFRMVYNGSSWKETLFEGLLCGSLTLTAVSALDYFDVPKSLTIAIGGTIGFIGVKKISTIISTYFSNRFGGGNPPQV
2838247..2838375                   hypothetical protein; AX02_27900                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSGKRKGRQTAACEWLPRGGGVFPGLILLIRQKHNVKRGKNE
complement(2838732..2838989)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27920; phage(gi23505494)     2.83e-57            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQDGKQQPYFFNPGMTPEQLEDWLGQQKLHLTYYNQLVNEKAALEERLNEISAEIERMSAGGFKGKLSFLWDPSPLPRNRQQNND
complement(2839122..2839571)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27930; phage(gi23505493)     4.24e-107           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLDCCGFWSCLQDEEWTDNEAKRITETIKGLRKIGYKGEALLSMARQILWPKQSIADLLNKEMRIEESDFVERCILSALSKDDPVFVVGIDFYARRKRVSDIGRYLQEIAPWLTRKQAEDRVRWCVNHFNCAVFLAFRDAMRKQNEKIS
complement(2839756..2840709)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; AX02_27940; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGVVLFRPGSELMPLFMQGRVLLEPEPEQYSSFACGAVPAVSQPLADDPAVRDVFRNESVIYRAGGLASLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLPESAARKALRMPKAIVQSATRESEIVPSVPATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCACCGKQADDPHHLIGHGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLS
complement(2840753..2841643)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_27950; phage(gi23505490)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQPTENGERSMNNLMVIDGIEVRRDVHGRYCLNDLHRAAGGEQKYRPKYWLDNKQTRELIEQLFTEGGIPPSEQNQSVSFFQGGSDTQNLGIAPVNTVRGGAEQGTYVCKELVFAYAMWISPSFHLKVIRTFDRITSAPQTSSGMAADKMQAGVILLGFMRKELNLSNSSVLGACQKLQEAVGLPNLAPQYAIDAPAGALDGSSRPTLALSALLKQHGIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
complement(2842016..2842909)       PHAGE_Salmon_ST64B_NC_004313: putative DNA methyltransferase; AX02_27960; phage(gi23505488)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSNKYCQALAELRNKSAHELKEVGDQWRTPDLLFWGINAMFGPLTLDLFADDDNAKCPVWYTADDNALVQDWAEMLESIGGAAFGNPPYSRSQYHEKQAITGMTHIMDHTMEMREKGGRYVFLVKAATSETWWPEDADHIMFIRGRIGFDLPVWFVPADDKQKTTGAFFAGAIAIFDKSWRGERFSYISRTELEEKGKAFMSLVEFAAGKVQPPATTAPEQEEPIIAPAVLPYVDSRIWPLEVGLVFNQVEGADSLDASQQNKLKANINQLWLERMPTSEIITTAGGLVSSMRREVA
complement(2843393..2844211)       PHAGE_Salmon_ST64B_NC_004313: putative replication protein; AX02_27970; phage(gi23505486)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSMELMVKAMKIRVGNPLRKLVLIKLADNASDQGECWPSYQHIADQCEISKRSVMNHIAALCESGLVKKVTRKGEKGNSSNIYLLHLDGAGDSLGGSANNSLPGAANSLGSAGVAPGGSEGDSPRTSHSFEPVKEPVNESKTIGASAYASSSVCFARQEYSPEFEQAWLAYPKRAGGNSKSAAYKAWKARLKEGVNAETMLEGVKRYAGWVSATGNSGTQFVKQATTFFGPDRHFGELWAVPAAPSPGREDPMFKSSYGNVDYSQIPTGFRG
complement(2844429..2845586)       PHAGE_Salmon_ST64B_NC_004313: putative antirepressor; AX02_27980; phage(gi23505485)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNSLTVNNRLSQQPGMYEYRPLRHECRLPNSLVVRNHREHSLTVGDESCRNLTAGFGMEGDFMSMSFAGNQKLSALSICARAIRMSVLALCGNSGVILLSVKRQEHIDSAIPGRYTVQAPHKAGAGRGNPEFNIEHNRAHAVFSCHEHCYAQIMVGRAGPVSAGPGSMLTGISTPVRLTTYKVVESLGGEFIEFNIEAATMATVPTLAQPEIRIINGQAVTSSLAVADYFIKRHADVIRKIESLECSTLFRQRNFAFTSISINQPNGGTRKLPCYQITRDGFAFLAMGFTGKRAAQFKEAYINAFNQMEKQLSIPSVLSDAAHNASVLYSYISSIHQVWLQQLYPMLEKAESPLAVSLYDRINDAVALASLINMTLNRSEVRGRK
complement(2845583..2846137)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; AX02_27990; phage(gi100118)     4.84e-135           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA
complement(2846166..2846390)       PHAGE_Salmon_ST64B_NC_004313: DNA binding protein; AX02_28000; phage(gi23505483)     5.22e-49            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI
2846488..2847183                   PHAGE_Salmon_ST64B_NC_004313: regulatory protein; AX02_28010; phage(gi23505482)      4.81e-170           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLGVDIAELFTSDPKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
2847998..2848369                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_28020; phage(gi23505481)     7.04e-86            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNDDRMTVVPDFLGELDAGVFMNKIAAALNTVGLGVLNNGNKGKVVLTFDFERMGNSVEEKRVKIKHKLQYSTPTPRGKASEEDTTETPMWVNKGGKLTILQEDQGQLFSIKGTTDGKLKAAQ
2848427..2849254                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_28030; phage(gi23505480)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSQLDSGTFQQVKDLVLSGYHLNDIQGLACPTALLPAGTGVESLERFALERFRFRGAMTTTSIEDFVRYSKGYASTTEKARCFIDADHMTARSVFNIGTLDNPGHADNVASVTLKQTAPFRALLQINGERLKQKQIAEWLEDWSDYLLAFDSDGKTMQISQAAQAVRRITIQQATQQDHEDGDFSGKKSLMQSIEASSKDVMPVAFEFKCVPYEGLGERAFSLRNSLLTGDEPRFVLRIVQLEAQEEAIANEFRDLLISKFDGESVETFIGNFKA
2849391..2849930                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_28040; phage(gi23505479)     2.57e-129           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSFIQTLSGKQFDYLSATIDDIDIEDIAVALSNICRFSGHLPEFYSVAQHSVLCSQLVSPEFAFEALMHDAAEAYCQDIPAPLKALLPDYREIEKRTDQLIRFKFGLPLEEASVVKYADLTMLATERRDLDIDDSIPWVILEGIPPTDLFEIYPLRPGQAFGLFMARFNELMELRQCAA
2850228..2850743                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_28050; phage(gi23505477)     1.40e-126           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSNRIRNAQVFDARTGEYPVYMYIHWIIGGELDFDANYQRGYVWGHEEQQAFLNAVISGFPIGSVALAKAPDWCSRELPYIEVVDGKQRLTTLKKFITNEIPIILADGPLYWRDMTRAEQLVFGRRPLPAVVLDEVTYKDRLAYFMVVNFTGVPQSEEHKRHVMQLMEAAQ
2850740..2851357                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_28060; phage(gi23505476)     1.91e-152           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSNIDKQALRERYSPKPAPECHICGAEMTIQRMSASRITYGCTGATYDDKGCHYAEGRSIADDHYEQSRVTVVDVSDPNVLALLDELDSANGYVSAYEAEKWHYHGLAESEGERADRAEKRVAELEYIATDYGVKFQKTQDALKHQALLHKSQMEAAEKQVEELTMWVKRLANSLRNTKPNSKLYGAAMDYLSRKGLISVEDVLR
2851354..2852187                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_28070; phage(gi23505475)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTTITKEWLQQTIAEFENTRDDIPFGLDDDDAKILLVLKRALASLDAEPVRYLNKFSGTCVTLEQQSNAADDVAVYIPLYTAPPAPVVPEEAYSDDCPDLYASQPEAWAAGWNACRAALLHGAEPVSQTYELPQTQFEQVADLYEMQFDDGRTCAFHTDGAKAAQWLLACDGNKVQEYVRLERYHEALIGNSPVIPDDWVMVPKKLTAENGAKSLLSGEFLETTFISFPECLADEECESCDGSGRIKIEVPVRWTTIKAIWNKGVEHFRSSTATGDN
2852191..2852760                   PHAGE_Salmon_ST64B_NC_004313: Endodeoxyribonuclease; AX02_28080; phage(gi23505474)     1.05e-140           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNNLMIDLETMGKKPNAPVVSIGAVFFDPQSGEIGPEFYTAVSLESAMEQGAVPDGDTILWWLRQSPEARAAICADAVSVTTALIEFNDFITCHADDLKYLKVWGNGANFDNVILRGAFERASLPCLWNYRNDHDVRTMVTLGRAIGFDPKRDMPFEGDMHNALADARHQAKYVSAIWQKLIPPTSNNI
2853029..2854018                   PHAGE_Salmon_ST64B_NC_004313: Integrase protein; AX02_28090; phage(gi23505472)       0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGRKRAPGNEWMPKGVFFRPSGYYWKPGGSTENIAPADATKAEVWVAYEKKVEGRKNRITFTQLWRKFLASADYADLAPRTQKDYLAHEKYILAVFGDAEAKAIKPEHIRRYMDARGQKSRVQANHEHSSMSRVFRWSYQRGYVPGNPCVGVDKFPKPQRDRYITDEEYRAIYNNATPAVRAAMEIAYLCAARVSDVLKMNWNQILEKGIFIQQGKTGVKQIKSWTDRLRDAVEICREWGEEGPVIRTMYGERYSYKGFNEAWRKARKAAGDDLGRPLDCTFHDLKAKGISDYEGTAKDKQKYSGHKTESQVLVYDRKVKMSPTLDRKR
complement(2854132..2854221)       tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGTTGCGGGGGTAACTCCGCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
2854179..2854193                   attR                                                                                 N/A                 CGGTTTTCGAGACCG
2854310..2855107                   Protein mtfA; AX02_28100                                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGFELDSLKSARIALIFCLPILELGIEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLRVSAAEGDYGEESEH
2855206..2855283                   attL                                                                                 N/A                 ATTCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2855208..2855283                   tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2855521..2855769                   PROPHAGE_Escher_Sakai: putative integrase; AX02_28110; phage(gi15834507)             2.77e-14            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MASIDSKYWQSGYRFNGKQKVFSIGVYPAVSLADARQRRDEVKRLLDQGIDPNAKNRLMKKSFRKSAIKPARPVSSPKADAP
2856176..2856253                   attR                                                                                 N/A                 ATTCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2856178..2856253                   tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2856417..2856890                   PHAGE_Escher_phiV10_NC_007804: putative protease; AX02_28120; phage(gi89152430)      9.11e-53            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MALTDTAGGTQTDPGTGKPSENPPAAPNKPTPPKEETPPGAPEKYAFTAPEGQELDTSALAQFEPVARELNLTQEQAQKLVDVYPKVLAGVQQQQAESWQKQTEDWAAAVKADKDIGGDKLASNLGAAQRAIDTFGTKELKEYLDGTCARSLVNAAP
complement(2856939..2857064)       hypothetical protein; AX02_28130                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSLCATKVTHRLSAGRERSRILAQIDGHAAAKPDVFAGRSP
2857365..2858063                   PROPHAGE_Salmon_LT2: integrase; AX02_28140; phage(gi16766072)                        4.09e-45            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGKLGGEMKALAKHCGGSHKTVNDCIHIVQRFDHHLRALNVHIQRVAQIKVRHIESYIHERLAQGIGKRTLQNEMASLRAVLQQAGRKQVAEHEWLTNKSLGLAGASRSGTRQAITPEHYHHVLETARMKAPGLAAALELARLMGLRSQEAVQSVQWIWGMGTGVGGMWRRCMGKFDSWLRASSGWSRLPPFTVSERLGGGGKYQAALPSPLQSKPESDRTNVEINERTCPE
2866112..2866123                   attR                                                                                 N/A                 CTAAAATCTGGC

#### region 6 ####
3500978..3502447                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; AX02_34150; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFSEILCAELPYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNRNR
complement(3502651..3502779)       hypothetical protein; AX02_34160                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSENLIKEKIISIDIFLFLQVFNACPNKRAQMVKNLVGHKKV
3502932..3503069                   hypothetical protein; AX02_34170                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKNSIFLPLLLVLSATTFSALVMAASHSPHQIIQNIFPVAGRQIS
complement(3503782..3503901)       PROPHAGE_Xantho_33913: ISxcd1 transposase; AX02_34180; phage(gi21231544)             6.43e-07            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MIYYSAQLFITLCFIHPGKPLQNACIERYNRTVGYDWLG
3504046..3504057                   attL                                                                                 N/A                 ACAAAAACCATG
complement(3505297..3505875)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; AX02_34190; phage(gi169257212)     5.79e-141           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETGTWSLHEDHRGETVYDTTTGNQVYISAPGPLPENVTSVSPDGEYQKWDGKAWVKDEAAETAARLREAEGTKSRLLQMASEKIAPLQDAVDLDEATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(3505865..3506689)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; AX02_34200; phage(gi169257213)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MIKLILSAPVPAMAVAFEHSFQNTENVEIIPGPFETIPEFDCMVSAANSFGLMDGGVDAAITAYFGPQLQERVQQHILREYLGEQPVGTAFVIETGNSKYPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKIKSVVFPAMGAGCGQVSPGSVARQMKLAWDGFINCTTEINWQYASARQNAVFSTTAYCPSKALCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGAHSHAVFLSPNSHGKHLKPEYLSGVKNDV
complement(3506686..3508011)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; AX02_34230; phage(gi169257214)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPVFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTITNMIAGKQPLDDTLTALSGKSIEGLIEYVGLRSTIDKAAGALPAGGTAVAANRLASRGALPALTGTTRGSDGGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
3508127..3508642                   Virulence protein MsgA-like protein; AX02_34210                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MDASDADDEAAVALAAAVLADVAAFVSDIFAAAADAAAAFSDAAAAVADAPASPALEAACVSDVFAAVSDAPARAADVCAAVALAAAAAAESPAAVRETSAFASDVFAAAADAAAAVLAVSADAALADASPAFVVAVPALLSADAADEAACVADASAAPAAFTAAVALSAA
3508650..3508835                   Side tail fiber protein; AX02_34220                                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSAPVQMPALRRWHSAMPPMPGGQLLPPSPQNVAAPPGGRRLPSWPPENHSGCPVLNHRRP
complement(3509112..3509348)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AX02_34240; phage(gi169257215)     5.86e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSRVISLAAGVSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGQIITRSVQCSLPAYLRDPDNQC
complement(3509393..3512755)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; AX02_34250; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLQSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGTALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGVKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRETNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVIPYTAGLPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGNNFTN
complement(3512817..3513323)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; AX02_34260; phage(gi169257217)     1.18e-118           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLGGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMVLGGVAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNTLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
complement(3513362..3513997)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpK homolog; AX02_34270; phage(gi169257218)     3.05e-148           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCAGQVHKFRCVPHLTGRHYKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWRASAFTGICNDFAAASACR
complement(3514106..3514807)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; AX02_34280; phage(gi169257219)     2.92e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MMQDISQDTLNESAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGRKYDVYPVDGCGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQNGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
complement(3515146..3518241)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; AX02_34290; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLDQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAMAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTATQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARDRKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
complement(3518213..3518485)       PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; AX02_34300; phage(gi169257222)     3.37e-59            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
complement(3518548..3518943)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; AX02_34310; phage(gi169257223)     2.51e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
complement(3518994..3519740)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; AX02_34320; phage(gi169257224)     3.70e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
complement(3519748..3519903)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; AX02_34330; phage(gi169257225)     1.58e-30            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
3520138..3521388                   PHAGE_Phage_Gifsy_1_NC_010392: transposase; AX02_34340; phage(gi169257226)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFAHQNASFPPRPEGRGGKEAVFRLTVFCIITFSSLICEAMKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFEPASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKAHLKVARLHAKIADCRLDALHKATRKLINDNQVVCVESLKVRNMIRNPSLSKAIADASWGELVRQLRYKGEWAGRSVVAIDQFFPSSKRCSCCGFIMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
complement(3521437..3522015)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; AX02_34350; phage(gi169257227)     1.05e-135           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
complement(3522437..3522796)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; AX02_34360; phage(gi169257229)     7.18e-80            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
complement(3522854..3523882)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; AX02_34370; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
complement(3523937..3524284)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; AX02_34380; phage(gi169257231)     2.53e-78            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
complement(3524297..3525793)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; AX02_34390; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQRNLSHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT
complement(3525783..3527363)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; AX02_34400; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT
complement(3527360..3527563)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; AX02_34410; phage(gi169257234)     4.65e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
complement(3527547..3529388)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; AX02_34420; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
complement(3529450..3529995)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; AX02_34430; phage(gi169257236)     2.10e-115           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
3530360..3530683                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AX02_34440; phage(gi169257237)     5.45e-72            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNVEFDKGQNSARYSGVIKGYDYNTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK
complement(3530919..3531398)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; AX02_34450; phage(gi169257238)     4.71e-104           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MMFNWKTMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(3531395..3531859)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; AX02_34460; phage(gi169257239)     2.85e-106           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQGLMMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGSKVLNGLTRRREAERALFLS
complement(3531831..3532079)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; AX02_34470; phage(gi169257240)     2.26e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
3532436..3533122                   PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; AX02_34480; phage(gi169257241)     7.18e-169           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MPAGIKPIFINNMMSIYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDNNPRGPVVEYTNIILKEMGHTSPPRIAYESSN
complement(3533340..3533528)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AX02_34490; phage(gi169257242)     1.79e-31            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKEGYYWIQHNGVAQVAYYTNDTVDDLESGQLIVGVWHLTRGDDICHNGEAEVLSGPLQPPV
3533661..3533774                   hypothetical protein; AX02_34500                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MIKGGRLHGLDLSTKHVADDSREPEYEKGHVNAQPLW
complement(3535539..3536030)       hypothetical protein; AX02_34510                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MWGRWSYIGGGSGGNMFNQLLSSGKITKTAINDALRRMKKSGITKPELEAFLREILNSKNKTGLAFCTDEEGLKIDGVIGAILVREGHSGLYSIIMNRYRLRKSKRLMAEELQVKHPEWCYMTCRRRIDSWLSLAESMLYAPMCDTFGTNSDRFYLKSEPVND
complement(3536132..3537085)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; AX02_34520; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGVVLFRPGSELMPLFMQGRVLLEPEPEQYSSFACGAVPAVSQPLADDPAVRDVFRNESVIYRAGGLASLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLPESAARKALRMPKAIVQSATRESEIVPSVLATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCACCGKQADDPHHLIGYGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
complement(3537129..3538019)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; AX02_34530; phage(gi23505490)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQPPENGERSMNNLMVIDGIEVRRDVHGRYCLNDLHRAAGGEQKYRPKYWLDNKQTRELIEQLFTEGGIPSSEQNQSVSFFQGGRDTQNLGIAPVNTVRGGAEQGTYVCKELVFAYAMWISPSFHLKVIRTFDRITSAPQTSSGMAADKMQAGVILLGFMRKELNLSNSSVLGACQKLQEAVGLPNLAPQYAIDAPAGALDGSSRPTLALSALLKQHGIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
complement(3538392..3538979)       PHAGE_Salmon_118970_sal3_NC_031940: cytosine-specific methyltransferase; AX02_34540; phage(gi100124)     1.64e-126           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTHIMDHTMAMREKGGRYVFLIKAATSETWWPEDADHIMFIRGRIGFDLPVWFVPADNKQKPTGAFFAGAIAIFDKSWRGERFSYISRTELEEKGKAFMSLVEFAAGKVQPPATTVPEQEEPIVAPAVLPDVDSRIWPLEVGLVFNQVEGADSLDALQQNKLKANINQLWLERTATSEIITAASELVRNMRGEAV
complement(3538976..3539284)       PHAGE_Salmon_118970_sal3_NC_031940: cytosine-specific methyltransferase; AX02_34550; phage(gi100124)     5.61e-69            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSNKYCQALAELRSKSAHELKEVGDQWRTPDLLFWGINAMFGPLTLDLFADDDNAKCPVWYTADDNALVQDWAEMLESIGGAAFGNPPYSRSQYHEKQAIPA
complement(3539768..3540220)       PHAGE_Shigel_SfIV_NC_022749: replication protein; AX02_34570; phage(gi557307567)     2.74e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTDQEFLTRHPDAAVLSPKKRQWGTQDDLTCAQWIWKKIIALYEQAAESDGELVRPKEPNWTVWANEIRLMCAQDGRTHKQICEMYSRVSRDPFWCRNILSPSKLREKWDELSLRLSAPIGGRFENREDPMFKSSYGNVDYSQIPTGFRG
complement(3540289..3540462)       hypothetical protein; AX02_34560                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MWQSCRRLHLLTCQILTSQNLTHQNLTHQNLTHQNLTRRNLAKTAVLTRQNLAGIRQ
complement(3540945..3542087)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; AX02_34580; phage(gi100057)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNSLTVNNRLSQQPGMYEFRPLRHECRLPNSLVVRNHREHSLTVGDESCRNLTAGFGMEGDFMSMSFAGNQKLSALSICARAIRMSVLALCGNSGVILLSVKRQEHIDSAIPGRYTVQAPHKAGAGIGVLELLSATNDAPASFLLSQLGYIQIMVGWVGAPKGAPVSDNAGYANPAQFTTSEIGVSGGGVTSKLSEAAIMATVPTLAQPEISVINGQAVTSSLAVADYFTKRHDDVLKKIRALDCSPEFTARNFAVSDYTDASGRKLPCYNITRDGFAFLAMGFTGKRAAQFKEAYVNAFNQMEKQLSTPSVLSDAAHNASVLYSYISSIHQVWLQQLYPMLEKAESPLAVSLYDRINDAAALASLINMTLNRSEVRGRK
complement(3542084..3542590)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; AX02_34590; phage(gi100118)     2.79e-120           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCVPEKGDARECAAPGAVASNFMEKTNA
complement(3542667..3542891)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; AX02_34600; phage(gi100117)     5.22e-49            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI
3542989..3543684                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; AX02_34610; phage(gi100116)     9.43e-169           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLGVDIAELFTSDSKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
3543929..3544045                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AX02_34620; phage(gi169257259)     2.42e-20            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MIDFARKPARQQAVPLNRIEVLIRRLCYLLAQKGDPDA
3544038..3544196                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AX02_34630; phage(gi169257260)     1.78e-30            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLKQCGYCRKSIDEGKEVKNTLLYRNGSQLARKEKEYCSRQCAEYDQMAHES
3544950..3547622                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; AX02_34640; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTWTQIPGVTLPSSEAAAAARQHIVDGVNTETDEVLEDHNENFGNGSNCPSPATAPAPELTIVATMPLRYRVLAQHIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAAVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMRAIANGFDTGEWPAPITEDYTDELNDFDVRRLEALRVQA
3547633..3548742                   PHAGE_Phage_Gifsy_1_NC_010392: RecT; AX02_34650; phage(gi169257263)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
3548818..3549024                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AX02_34660; phage(gi169257264)     1.75e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(3549327..3550556)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; AX02_34670; phage(gi169257266)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGSYPEFGLKAAREEVTKWAAILVRGENPRIRQGLDKAKINSQYTFEELFREWHAMVCVQKETSDQILRSFELHVFPKLGKYPAHQLTLHNWLTVLDRLAQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKMGERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGVWTVPWENHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPGRFVFSKYADKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDVLEFTPRQTG
3550630..3550641                   attR                                                                                 N/A                 ACAAAAACCATG

#### region 7 ####
3618007..3618053                   attL                                                                                 N/A                 ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAA
3618099..3618242                   PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; AX02_35210; phage(gi418489728)     9.09e-28            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAAKWRQRVGLAATKNPPLKRVLFRNSCGLDHLFPDVVAQKKLDSVL
complement(3618456..3619556)       PHAGE_Salmon_RE_2010_NC_019488: gene D protein; AX02_35220; phage(gi418489726)       0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNVNSDLLNLNSKSPAFSIVIEGKDVTTVLDTRLMSLTLTDNRGFEADQLDLELDDADGLIALPRRGAVIQLALGWKGQPLFPKGAFTVDEIEHSGAPDRLTIRARSADFRETLNTRREKSWHQTTVGDVVKDIAARHNLKVALGKDLTDKALDHMDQTNESDASFLMKLARQYGAIASVKDGNLLFIRQGQGRTASGKPLPVITIERKAGDGHRFTLADRGAYTGVIASWLHTREPRKKETTKVKRRRKKTTKPKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVTGFKQPIDDAEWTITTLMHSVSPDNGFTTSMELEVKIDDLEIE
complement(3619553..3620038)       PHAGE_Salmon_RE_2010_NC_019488: tail protein; AX02_35230; phage(gi418489725)         1.44e-114           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDSLTLSGVLLPEVTGGRLSLLALEQMAELGKAWPLIQGSGTIYGMFVIESLSQTKTEFFASGMPRRIEFTITLKRVDESLSDMFGSLSDQLSNLQDSAASAIGEIKNTVGGLLQ
complement(3620035..3622842)       PHAGE_Salmon_RE_2010_NC_019488: tail tape measure protein; AX02_35240; phage(gi418489724)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSDNNLRLQVILNAVDKLTRPFRSAQASSKELAAAIQQSRARLKELDAQAGRIDGFRKASAQLAVTGNSLKAAREETAKLATQFSATNRPTAAQARLLEQAKNRVTELQSKYNGLRQSVQRQRLALNEAGLDTKKLSSVQRELRQNADETRQALDRQQKSLKRLGEQQARMNAVRDQYSRRLEVRDRIAGAGATTTAAGVAMGAPVVAAVKSYASMEDAMKGVAKQVNGLRDDNGNRTKQFYDMQDAIKAASEQLPMENGAIDYAALVEGGARMGVTNQDDPYEEQKRDLLAFASTAAKAATAFELPADELAEGLGKIAQLYKVPTRNIEQLGDALNYLDDNAMSKGGDIINVLQRMGGVADRLDFRKAAALGSTFLSLGAAPEIAASASNAMVRELSIATMQSKRFFEGMNLLQLNPAEIEKQMTTDAMGTIQRVLEKVNNLPQDKRLSAMTMIFGKEFGDDAAKLANNLPELQRQLKLTSGSGANGSMQKESDINKDSLSAQWLLVKTGAQNAFSSLGETLRQPLMDIMGMVKRVTGALRRWVEQNPVLAGTLMKVAAATAAITVGLGALAVAVAAVLGPLAVIRFGLSMLSVKALPSAAAAATRTGSVLRLLISGPLALLRVALFAVGSLLGALLSPVGLVVAALAGVALVIWKYWQPISAFLGGVVEGFRAAAAPISAAFEPLRPVFQWIGDRVQALWGWFNDLLTPVKSTAEELNSAAAMGRRFGEALAEGLNMVMHPLESLKSGVSWLLEKLGIVSKEAAKAKLPAQVTQQQSATVNSDGKVVLPPGGFPAYAGMYDTGGIIPRGQFGIVGENGPEIVNGPANVTSRRRTAALASVVAGVMGVAATPAEAAPLHPFSLPARAYQPPLAKADSPPPVIRYEINAPIHIVAQPGQNAQDIAREVARQLDERERRARAKARSNFSDQGGYES
complement(3622835..3622954)       PHAGE_Salmon_RE_2010_NC_019488: tail protein E'; AX02_35250; phage(gi418489723)      8.36e-22            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MADIATIFHWSPSITDVMPLTEVLAWRHKAIQRSGASDE
complement(3622969..3623271)       PHAGE_Salmon_RE_2010_NC_019488: tail protein E; AX02_35260; phage(gi418489722)       3.13e-64            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSDKLTEKTVKLDTPIMRGKAEITEIVLRKPQSGALRGTRLQAIMDMDVGAMMTVIPRISTPTLTAQEMAELDPADLTALSVEVVTFLLPRSVLAGLPTA
complement(3623326..3623841)       PHAGE_Salmon_RE_2010_NC_019488: major tail tube protein; AX02_35270; phage(gi418489721)     4.10e-122           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKFEKYRGGGMPGAVDVDMGLDDGALDTEFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAVELVVRGRHKEVDSGEWKTGESSSTKVSSTNSYAKLTINGEVLYEVDLVNMVEIVGGMDLMEEHRNALGL
complement(3623851..3625023)       PHAGE_Salmon_RE_2010_NC_019488: major tail sheath protein; AX02_35280; phage(gi418489720)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAQDYHHGVRVVEINEGTRPITTVSTAIVGMVCTGDDADASVFPLNKPVLLTDVLTASGKAGESGTLARSLDAIADQAKPVTVVVRVAQGETEAETTSNIIGGVTSDGKKTGMKALLSAQSQLGVKPCILGVPGHDTQAVATELLGVAQSLRGFAYLAANGCKTVEEAIAYRENFSQREGMLIWPDFINFDTVLKADATAYASARALGLRAKIDEQIGWHKTLSNVGVNGVTGISADVFWDLQDPATDAGLLNKNDVTTLIRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLADTMAEAHMWAVDGVLNPSLARDIIEGLRAKMRSLVNQGYLIGGDCWLDESVNDKDALKAGKLTIDYDYTPVPPLENLMLRQRITDRYLVDFASRVAA
3625056..3625175                   PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; AX02_35290; phage(gi418489719)     1.33e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFWLPGVRRTHFTMCQCWYNIATFNATDLQGISCKEWKC
complement(3625898..3626014)       PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; AX02_35300; phage(gi418489715)     4.08e-21            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MVGEYMGQALAASHWKSVLYYLVEVLNHWQPSPMSKRL
complement(3626220..3626795)       PHAGE_Salmon_RE_2010_NC_019488: tail fiber assembly protein; AX02_35310; phage(gi418489714)     2.40e-140           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTFKMSSKARTITIYNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAVFDAETEMWSLHEDHRGETVYDTTTGNQVYISSPGPLPENVTSVSPDGEYQKWNGKAWVKDEVAETAARLREAEGTKSRLLQTAAEKIAPLQDAVDLEIATDDEKVQLDEWKKYRVLVNRVDTTNPDWPDVPVSQ
complement(3626795..3628648)       PHAGE_Salmon_RE_2010_NC_019488: tail fiber protein; AX02_35320; phage(gi418489713)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSAKFYTLLTEIGAAKLASAAALGVPLKITHMAVGDGGGVLPTPSAQQTALVAEKRRAALNMLYIDPQNSSQIIAEQVIPETEGGWWIREVGLFDETGALIAVGNCPESYKPQLTEGSGRTQTVRMVLITSSTDNITLKIDTAVVLATRKYVDDKALELKVYVDDLMAKHLAAPDPHSQYAQKDSPTLTGIPKVPTPAAGNSTKQIANTEFVASSIAAIVDSAPAALDTLNELAAALGNDPNFATTMINALAGKQPLDNTLTNLSGKDVAGLLAYLGLGETINLATGAMQKDQNLNDVPDKALARQSLQLGNSATLNVGTTPDTVAAGDDIRISTAKRAIDDTQTGLGAQPVMWVSTADDLSILPSGARRFASNKAPATILPVNDYVFLEVIAKRDCVDGCAVLITDSVGNTWIGARWDATNDSGFTWRPLMSCPPGVPLPWPSDTIPAGYALMQGQAFDKNVYPLLAIAYPSGTIPDMRGWTIKGKPASGRAVLSQELDGNKSHSHSARAQDTDLGTKGTSSFDYGTKSSNTTGGHNHSAGGTYGGDSIGGKIRVQHDGNDQLTSWNGDHAHTTWIGPHDHTVYIGPHGHVVIVDADGNEETTVKNIAFNYIVRLA
complement(3628645..3629250)       PHAGE_Salmon_RE_2010_NC_019488: tail protein I; AX02_35330; phage(gi418489712)       1.76e-148           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNSLLPPGSSPLERRLAQTCSGISDLQVSLRDLWNPATCPIRFLPYLAWAFSVDRWDESWTESVKRRVVQDAFYIHQHKGTTRAVRRVVEPFGFLIRIIEWWQTGETPGTFRLDIGVQDHGITEDTYLELERLISDAKPCSRHLVGMSINLQTGGPYFVGAATYTGEEITIYPYINETIISGGTAYEGGAVHVIDTMRVNP
complement(3629243..3630151)       PHAGE_Salmon_RE_2010_NC_019488: baseplate assembly protein J; AX02_35340; phage(gi418489711)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAVIDLSRLPPPQIVDVPDFETLLAERKAAFVALYPVDEQDAVRRTLALESEPVTKLLQESTYREILLRQRINEAAQAVMVAYSMGNDLEQLAANCNVKRLTVVPADNDAVPPVAAVMEDDEALRQRIPAAFEGLSVAGPTGAYEFHARSADGRVADASATSPAPAEVVLTVLSREGDGTAVKDLLDVVEKALNSESVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASLQKYIASQTRLGRDIRRSAIYAALHVEGVQRVELTSPLEDVVLDKTQAASCTEWSVTNGGTDE
complement(3630138..3630497)       PHAGE_Salmon_RE_2010_NC_019488: baseplate wedge subunit; AX02_35350; phage(gi418489710)     2.49e-82            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTPYIGMSRNDGQALADTDHLRQSVRDILLTPQGSRIARREYGSLLSALIDQPQNPALRLQIMSAVYVALNRWEPRLTLDSITINGNFDGSMVVELTGHSNNGAPVSLSISTGADNGSH
complement(3630494..3631072)       PHAGE_Salmon_RE_2010_NC_019488: baseplate assembly protein V; AX02_35360; phage(gi418489709)     2.21e-139           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVKVGELETNWINWLTLRAGSARTWWCPSPDEQVVVLSMGGNLETAFVLPAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVRGIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVTQGGGAMSSNGVVMDKHGHTGVKSGGDTSGGPV
3631150..3632001                   PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; AX02_35370; phage(gi418489708)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLTVGIYGFNITKVTHFSFGTMFPTCKSISEIIKKMKSRDELHLTAFLELDINDANECRDILFHLTAILSFIEQRPVSFGYSLRKHESMGNLDDDYPKLINIAYSIKSTGIIIKEDYYSKNSRRYFIEAALNKIIIEKDRHYSTLLHKNVQVFSTPQRYIDVSYYLLFSGLESIARQRENDLSNNAPSVLYKYLSKFKFDIKQQDNKRPPRSLDIYSGLRNALFHNGEYQTAPMKRNGTECTFLLKDYYSYFRRLNSLVILKEANFEDGKINWDFVNYRHYFK
complement(3632003..3632431)       PHAGE_Salmon_RE_2010_NC_019488: tail completion protein; AX02_35380; phage(gi418489707)     6.16e-101           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MDDWLMALLANLEPTARSRMMRQLAQQLRRSQQQNIRLQRNPDGSGYEPRRVTARSKKGRIKRQMFAKLRTTKYLKTAASADSASVQFDGKVQRIARVHHYGLRDRVSRKGPEVRYAERHLLGINDEVAALTCDTLLRWLIA
complement(3632442..3632873)       PHAGE_Salmon_RE_2010_NC_019488: tail protein; AX02_35390; phage(gi418489706)         2.83e-101           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNKPQSLRNALNKAVPYVRNNPDKLHLFVDNGSLVATGASSMSWEYRYTLNVVIEDFSGDQNLLMAPVLLWLSASQPDAINNPELREKLFTFDVDILRNDVCDISLNLQLTERVLVNTDGSVSSVEAVTEPDEPEEMWTVKRG
complement(3632969..3633397)       PHAGE_Salmon_RE_2010_NC_019488: lysozyme subunit B; AX02_35400; phage(gi418489705)     5.96e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTRALAVVVALAFVALGWQSWRLNSASHTIETQLAALKSKAQELTKKNSQLIGLSILAETNNREQARLYAEAEQTSAQLRQRQRRIEELKRENEDLRRWADAPLPADIIRLRERPALAGGAAYREWLSQSDAVPLGQVSAAQ
complement(3633394..3633909)       PHAGE_Salmon_RE_2010_NC_019488: lysozyme; AX02_35410; phage(gi418489704)             8.84e-124           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNPSIVKRCLVGAVLAIVATLPGFQSLHTSVEGLKLIADYEGCRLQPYQCSAGVWTDGIGNTSGVVPGKTITERQAAQGLITNVLRVERALDKCVVQPMPQKVYDAVVSFAFNVGTGNACSSTLVKLLNQRRWADACLQLPRWVYVKGVFNQGLDNRRAREMAWCLKGAGL
complement(3633890..3634105)       PHAGE_Salmon_RE_2010_NC_019488: lysis protein S; AX02_35420; phage(gi418489703)      1.37e-45            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTLERISAFITYCIAVLLAWLGDLSLKDASTVGGVLIGVLMLAINWYYKHQSFKLLRGGKISRGEYESFNR
complement(3634109..3634312)       PHAGE_Salmon_RE_2010_NC_019488: tail component protein; AX02_35430; phage(gi418489702)     2.49e-44            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKVRAHQYDTVDALCWRHYGRTQGVTEQVLQANPGLAEYGPFLPHGLQVELPDITASTTAQTVQLWD
complement(3634312..3634839)       PHAGE_Salmon_RE_2010_NC_019488: head completion-stabilization protein; AX02_35440; phage(gi418489701)     1.16e-112           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAKGTATSKFRPPPTYSGESRMKFVAPEQAPEQAEVIKNTPFWPDVDLSEFRSVMRTDGTVTQQRLKQVVLTAISEVNAELYDFRNRQQMQGWRTLAEVPAEMLDGKSERIRHYHNAVFCWARAVLNERYQDYDATVSGVKRGEELAEASGDLWRDARWAISRVQDTPHCTVELI
complement(3634870..3635520)       PHAGE_Salmon_RE_2010_NC_019488: terminase endonuclease subunit; AX02_35450; phage(gi418489700)     9.53e-155           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSLSPARQHRLRIQAEQAAREGGSVRHASGYDLMLLQLAEDRRRLKGVQSTVKKAEIKVELLPKYSAWAEGVLAAGGAQQDDVLMYVMLWRIDAGDYAGALEIGRHALRHGWVMPLGNRNVQTVLAEEMADAAQSALLAAAGFDADLLLQTLDLTTDLDMPDQSRARLHKAIGAVLSESNPASALNHLNHALQLDPRCGVKKEKQQLERRLRNDSR
complement(3635524..3636585)       PHAGE_Salmon_RE_2010_NC_019488: major capsid protein; AX02_35460; phage(gi418489699)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKKKTRFAFNAYLQQLARLNSVEVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTTDTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAENPLLQDVNKGWLQKIREDAPDHVMGSTTKDGATTAGAVKVGKGGDYANLDAVVMDAVNELIDAVYQDDDDLVVVCGRELLSDKYFPLVNKEQDNSEKIAADLIISQKRMGGLQAVRAPYFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAALVENIEIGDFSAPAAPESGE
complement(3636602..3637429)       PHAGE_Salmon_RE_2010_NC_019488: capsid scaffolding protein; AX02_35470; phage(gi418489698)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKAKRFRIGVEGATTDGREIQREWLVQMAASYNPTVYTALINLEHIKSYLPESTFNRYGRVTGLVAEEIQDGPLAGKMALYADIEPTDALVELVKKGQKLFTSMEVSTKFADTGKAYLVGLGATDDPASLGTEMLAFSASAAHNPLANRKQNPENLFSEAVETLIELEEVQDEKPSLFARVTALFTKKEQTDEARFSDVHKAVELVASEQQNLSERTDKSLSEQDKRLSELESSLQEQLAAFAELEQKLSSEDSRKDYRQRAPGGDAPAGTLTNC
3637626..3639344                   PHAGE_Salmon_RE_2010_NC_019488: terminase ATPase subunit; AX02_35480; phage(gi418489697)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLLYFQGYRVARIAEMLGEKVATVHSWKKRDKWGDYGPLDQMQLTTAARYCQLIMKEHKEGKDFKEIDLLARQSERHARIGKFNNGGNEADLNPNVANRNKGPRRQPEKNVFTDEQIEKLEEVFHASMFDYQRHWFEAGKTNRIRNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVDVELKGDPMVLPNGAALYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWRQTYFSTPSSLTHSAYPFWSGALFNRGRAKADKVDINLTHSNLARGLLCPDGQYRQIVTVEDAVRGGCNLFDLDQLRMEYSPDEYQNLLMCEFVDDLASVFPLSELQACMVDSWEVWTDFQALALRPFGWREVWIGYDPAKGTQNGDSAGCVVMAPPTVPGGKFRILERHQWRGMDFRAQADAIKKLTQQYNVTYIGIDSTGVGHGVYENVKAFFPAVREFVYNPNVKNALVLKAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATMHALFNEPLQGESANTSNIVEIF
3639344..3640384                   PHAGE_Salmon_RE_2010_NC_019488: capsid packaging protein; AX02_35490; phage(gi418489696)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSELEALTSTTPTEDMAPKNADVTAEAFSFGDPIPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTYRAAVHHSSPIAVKRNILTSTFIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRLGGILSLEPSLAKYTRRGIDLDTYWFVQYGLTTPPYEFTKGSIFHLMEPDLNQEIYGLPEYLSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNIRQAMKSAKGPGNFRNLFMYSPNGKKDGIQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPSNVGGFGDVEKAAKVFVRNELLPLQKRLTELNSWLNDEVIKFEAYSYDIT
complement(3640488..3642152)       PHAGE_Salmon_RE_2010_NC_019488: abortive infection protein; AX02_35500; phage(gi418489695)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MANLLDWNTLHHKVQAYLDPENGIDKPQKAFPILMVATLLNVSDEEAEDAITDGSMDRGVDAVYVDDRDGRNSIHIFQFKYADTFENTKKNFPSNEIDKLVSFFDDLLDLNKSLEKTCNPILWNKIKEIWAALEKSNPSIEVHFCGNTMEMQNGEKERANASLSKYKYFNVHHHSLDTIVNYFVERKNSVIDEQLQIVDKDYFDRTDGSIRGLICTVEASEIVRIITNPENPKEVRKEIFNDNVRVYLSRTNKINRRIIETALSDRSPLFWYLNNGITVTCDSFSYIKGKRAPLVELKNIQIVNGGQTSNALFEASLNSEERLEDVLILVRIIETKSQPVSLAIAESTNSQTPIKSRDLRSNDDIQKKLEEAFEGMGLFYDRKDGQHSNQPKSVRVDALSAGQAHLAYSLDLPEVAKKDRGRIFSDLYETVFTDELMADELLASIKVLSVIENKKKLLQSSIRKEEKFNSAHMFLIDGAYHVLFAVGQICDAKGVDRLNYQKAITFVPAAIKYISAMVEKAQRDDASFSFNRYFKDAKTKTKIAAYIQGMEKGL
complement(3643257..3643499)       PHAGE_Salmon_RE_2010_NC_019488: SOS induction modulator; AX02_35510; phage(gi418489694)     6.39e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTFMRIEIMIDKEQKISQSTLDALESELYRNLRPLYPKTVIRIRKGSSNGVELTGLQLDEERKQVMKIMQKVWEDDSWLH
complement(3643501..3643665)       PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; AX02_35520; phage(gi418489693)     8.16e-33            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MKLQRIDFFLKLVAASECSDEEKGLALQWVSELTDELMAKIRTHEYNRSMDVIN
complement(3643842..3646256)       PHAGE_Salmon_RE_2010_NC_019488: replication protein; AX02_35530; phage(gi418489692)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSHADMNNCSGFNEAAAAFSWNSPKKAINPYLDPAEVAPVSALSNLITLYAADNEQEQLRREALSDQVWERYFFNESRDPVQREMEQDKLISRAKLAHEQQRFNPDMVILADVNAQPSHISKPLMQRIEYFSSLGRPKAYSRYLRETIKPCLERLEHVRDSQLSTSFRFMASHEGLDGLLILPEMSQDQVKRLSTLVAAHMSMCLDAACGDLYATDDVKPEEIRKTWEKVAAETLRLDVIPPAFEQLRRKRNRRKPVPYELIPGSLARMLCADWWYRKLWKMRCEWREEQLRAVCLVSKKASPYVSYEVVMHKREQRRKSLEFFRSHELVNEDGDTLDMEDVVNASSSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHSTLNNGRPNPTWTNATVRQSSDYLVGMFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRAITALLRKFAIREDREELGNNTGPRFKSELINPRKGTPTSYIAKYISKNIDGRGLAGEISKETGKSLRDNAEYVNAWASLHRVQQFRFFGIPGRQAYRELRLLAGQAARQQGDKKAGAPVLDNPRLDAILAAADAGCFATYIMKQGGVLVPRKYHLIRTAYEINEEPTAYGDHGIRIYGIWSPIAEGKICTHAVKWKMVRKAVDVQEAAADQGACAPWTRGNNCPLAENLNQQEKDKSADGGTRTDITRMDDKELHDYLHSMSKQDRRELAARLRLVKPKRRKDYKQRITDHQHQQLVYELKSRGFDGSEKEVDLLLRGGSIPSGEGLRIFYRNQRLKEDDKWRNLY
complement(3646253..3647110)       PHAGE_Salmon_RE_2010_NC_019488: DNA adenine methyltransferase; AX02_35540; phage(gi418489691)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MSTILKWAGNKTTIMSELKKHLPAGPRLVEPFAGSCAVMMETDYPSYLVADINPDLINLYKKVAADCESFISRARVLFEIANREVAYYNIRQEFNYSTEITDFMKAVYFLYLNRHGYRGLCRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQRATFICASFDETLAMLKAGDVVYCDPPYDGTFSGYHTDGFTEDDQYHLASVLEHRSSEGHPVIVSNSDTSLIRSLYRNFTHHYIKAKRSIGVAAGESKSATEIIAVSGARCWVGFEPSRGVDSSAVYGVRA
complement(3647107..3647334)       PHAGE_Salmon_RE_2010_NC_019488: zinc-finger containing protein; AX02_35550; phage(gi418489690)     3.48e-48            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MADAMDLVQQRVEEERQRHIRAARAKTPGVSRVLCIECEAPIPPARRRAIPGVQLCITCQEIAELKGKHYNGGAV
complement(3647334..3647567)       PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; AX02_35560; phage(gi418489689)     1.15e-47            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MRNIETLTTKAGPDDAGLNILLTEARLEERRARAEAMAARLDSLACHITSRQLNHVEAAELLRVTAEAIQNEAQEIH
complement(3647635..3647976)       PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; AX02_35570; phage(gi418489688)     2.34e-76            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MAIEGAAATVPLSPGERLNGLNHIAELRAKVFGLNIESELERFIKDMRNPRDINNEQNKRALAAIFFMAKIPAERHSISINELTTDEKRELIKAMNHFRAVVSLFPRRLTMPN
complement(3647940..3648140)       PHAGE_Salmon_RE_2010_NC_019488: cell division blocking protein; AX02_35580; phage(gi418489687)     6.49e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLTKEPSFASLLVKQSPAMHYGHGWIMGKDGKRWHPCRSQDELLAELSTKKRGNKWLLKALRRLFH
complement(3648148..3648657)       PHAGE_Salmon_RE_2010_NC_019488: regulatory protein; AX02_35590; phage(gi418489686)     1.96e-122           SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFDYKISKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLNPAQPHLLTAPEIWLLTDLTEDSTLVDGFLAQIHCLPCVPINEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTSAGRRDAISSINSVTRLMALAAVSLQARLQANPAMASAVDTVTGLGASFGLL
complement(3648691..3648807)       PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein Ap1; AX02_35600; phage(gi169936062)     1.12e-19            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MVKKEKNKGRVSLRYLMYKTDQVRESLGHSNFRVIVGK
3649463..3649687                   PHAGE_Salmon_RE_2010_NC_019488: repressor; AX02_35610; phage(gi418489684)            1.66e-47            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MFLETPTDCYLIDKSIKQVSNGFWLINIDGMIIVAKIMRIPGNKIVVNQDEASFECSTDDVEVIGRAVKVIKSI
3649690..3650706                   PHAGE_Salmon_RE_2010_NC_019488: integrase; AX02_35620; phage(gi418489683)            0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTVRKQPNGKWLCECYPNGRNGKRVRKQFATKGEAIAFESFTMEEVNKKPWLGEKEDRRHLSELIEQWYSLYGQTLADPKRLMAKLRIICNGLGDPIASELTAGDFTKYREARLKGEVRNEDGTLMSPVKPRTVNLEQRNLSSVFGTLKKLGHWSAPNPLAGLPTFKITEGELAFLSVDEIKRLLAACAESQSPSLLMIAKICLATGARWSEAENLQGHQISKYRITYTKTKGKKNRTVPISQDLYHELPKNRGKLFTPCRKSFERAVKRAGIDLPEGQCTHVLRHTFTSHFMMNGGNILVLRDILGHSDIKMTMVYAHFAPEHLEDAVTKNPLFNLK
3650716..3651921                   PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; AX02_35630; phage(gi418489682)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MHIQQELDEELNNLFDTIRKKSSIRPPIEIEKNLTLIDDFALKCSKFRGCLVDYIQENDNRLSLRLRNRLRAVDIMQKEIVSCLECFLSGDIKSAYDSFESMLEPRTISRHIENICIPLSDLCNEDKPLFRVRKSDTPLTSRRDMFHIPFSQRHFVRAQRFSVAGLPCLYLGTSLYICWREMDKPDFDKLYISAYKIDKNNDSKVLNIGPDFLYKQRSILESKRKNKYDFNTKLSYLALWPLIIACNYLKKYDNASFVQEYIIPNLLMQWISRNSNENVVGIAYRSTKLPANALGSRGINVVLPPKVRYEEMANNEFCPNLAKIFKFTLPVSWQVLKTVEYVPESVAQSDRENLSRRLRRRKNRELTGSIDDEILNIYNLTDFYKLETCMDEIQVYAHIKP
3652041..3652087                   attR                                                                                 N/A                 ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAA
3652459..3653316                   PROPHAGE_Entero_Fels-2: integrase-like protein; AX02_35640; phage(gi16766052)        0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSRQDRRRRSFSP
3653330..3653497                   PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; AX02_35650; phage(gi16130540)     1.31e-10            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE

#### region 8 ####
3821705..3822232                   PHAGE_Lister_vB_LmoS_293_NC_028929: hypothetical protein; AX02_37360; phage(gi971756903)     2.24e-05            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MMFTDWHEAAIGKTHNRMNFDCGDADLNQFLQRHARQNHEKGTTKTYVALDNSDVTRIHGFYSVSPASLIYAQVPGAISKGLGRYDVPVFRLGRLAVDKSMQGQGLGAQLLLSAGKRCIQAALQVGGVALLIDAKNKQVCDWYKGFGAVPLNDQPLSLLLSFKTLYAALSASGRL
complement(3822305..3822457)       PHAGE_Entero_HK022_NC_002166: IS903 transposase; AX02_37370; phage(gi9634149)        1.37e-15            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899METAMFRIKTLLGGHLSLRNYDAQVGEAMAMVKALNRMTLLAMPTSVRLV
3822857..3823513                   PHAGE_Salmon_SJ46_NC_031129: baseplate distal hub subunit; AX02_37380; phage(gi100102)     6.20e-64            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MELIRYADINSDLYRHIWVVGDIHGCYSLLLTRLAQLNFSPDTDLLISTGDNIDRGKENLETLRLLNTPWFISVVGNHEAMALDAFETQDGNFWYVNGGYWYDSVTEKDRQEATELLLTFKQRPHIIEVETSSKKYVIAHADYPDDSYDYGKQVDIDSVLWSRDRLLGSLQGNIHPIRGADTFIFGHMIVDYTTTFANQIYIDTGSFCSGNLSFFKIK
complement(3823685..3823870)       hypothetical protein; AX02_37400                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLATKRNFNKIKRETDASELETVIKIVLHEGKPIHFATTVIAFSSDRYLELCDLYSSQAIE
complement(3824044..3824157)       hypothetical protein; AX02_37390                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLSLHSVALEKSFSKLTQLKNSTLFSMTTEKLLLVSG
3824365..3826932                   PHAGE_Bacter_B124_14_NC_016770: putative mismatch repair protein; AX02_37410; phage(gi374671664)     2.01e-12            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNESFDKDFSNHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDGKGYGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYAEDFAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENASRGLCAAGCLLQYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGVENTLAAVLDCTVTPMGSRMLKRWLHMPVRNTDILRERQQTIGALQDTVSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELHAQLETVDSAPVQALRKKMGDFAELRDLLERAIIDAPPVLVRDGGVIAPGYHEELDEWRALADGATDYLDRLEIRERERTGLDTLKVGYNAVHGYYIQISRGQSHLAPINYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQSANALAELDVLVNLAERAWTLNYTCPTFTDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLAAPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV
complement(3826988..3827368)       hypothetical protein; AX02_37420                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MNPYKEEIIHAHAAIENWLSKGVGSLEALIARFAADFTMITPGGVCLDYPALGAFFQAQRACRPGLVIVVEHIDLVAEWPEGAALRYRERQQLPGQAETVRWSTVILKRERGRIVWRHLHETTVTA
complement(3827365..3828573)       PHAGE_Mycoba_Enkosi_NC_028936: transporter-like protein; AX02_37430; phage(gi971757643)     6.82e-05            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MTYRSKVAVVYLLGFFLDLINLFIASVAFPAMSVDLHTSISALAWVSNGYIAGLTLIVPFSAFLSRYLGARRLIIFSLILFSVAAAAAGFADSLHSLVFWRIVQGAGGGLLIPVGQALTWQQFKPHERAGVSSVVMMVALLAPACSPAIGGLLVETCGWRWIFFATLPVAVLTLLLAYRWLNVASTTMASARLLHLPLLTDRLLRFAMIVYLCVPGMFIGISVVGMFYLQNVAQLSPAAAGSLMIPWSIASFVAIMLTGRYFNRLGPRPLIIVGCLLQAAGILLLTNVTPATSHRVLMMIFALMGAGGSLCSSTAQSGAFLTIARRDMPDASALWNLNRQISFFLGATLLTLLLNALQRVMSLEVAYRWTFIAAAGITLLPLIYAVCLNNRQALLCLKKERS
3828682..3829593                   PHAGE_Burkho_phi1026b_NC_005284: gp58; AX02_37440; phage(gi38707948)                 5.19e-07            SalmonellaentericasubspentericaserovarTyphimuriumstrUSDAARSUSMARC1899MLNLQRMSLFIAVVDSGSFTAAAAASGQTKAVVSFNIRQLEKELGVTLLLRSTRRLTLTDAGVLFYQKGVNLLNAAKNLQDEVRASHSGLGGELRITTTPEFGEQVIIPLLAQFSQRHPDLRIRHMSSSHHADLIAERFDVAIRLGSLADSRYRAALISRFTILPVAAPQWLARNPVSSLESLAQAEWIIHERLPTPLRWTVTSNHGQHSRLEISKAGKISVDSARSLMAFALAGSGVALLPQWLVNTALEDGTLIHVLPDYHFPRQGIYAVYPDARHVSTKVRAFIDFLRSQWDCGEHAPSS
