gi|00000000|ref|CP007266.2|  Salmonella enterica subsp. enterica serovar Enteritidis str. 4685848, gc%: 51.74%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1011984..1013186)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; AU22_05245; phage(gi100242)     1.40e-49            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS
1013332..1013346                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1013381..1013791)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; AU22_26325; phage(gi169257271)     1.46e-44            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
1013812..1014441                   hypothetical protein; AU22_05265                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MYGVQGTPDCYRIELKNVYGVQENLISYRQASLGAWVAIAGGGDPYEVAYAIYKAVPDISVLTNDVVNPSGAAVDKKTIPIIVYPDTYHVPFVVPSSQNVTLLITWNTASTSYIDPTGIEKAVQQSIADYINGIATGEPINIFLIRDIFLNQVKGLVSSNLVSMIDIQVGINGKIVPPATDSSLVYGDTYAYFSTSSSQIQVKQYGSSS
1014425..1015051                   hypothetical protein; AU22_05270                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MAALLESIIPAYPYTQYNDDPDIVAFFDAYNKLAQGYLDYFNNLNLPCWTSPAITGELLDWIAAGIYGESRPLLQISEDAIARGAYNTIEYNNVAYAKLRNYVPGSASYVPDDYFKRILTWNFYKGDGSHFCINWFKRRLARFIHGANGIDPPVQSTFDISVMPDKGIFFVSIPDYGDGVGHFLKDAIDQSLVKLPFIYTYSVTVVEQ
1015048..1016757                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AU22_05275; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MIIGFGNNVVSSLAADITASQTTIQVMPGVGAMFANLLTSDYANSSNPLKTYAKITLTDAKETVFEVCHLTAVNNDMLTVIRGQEGTTAKGWSLNDVIANFATRGSENQFVQIEELQSGHYVAGVAGGTENNLTLELPATYFVNGGVDWTLRTPLVVIPALNNTGASTLQLTMGGRVLGIFPLYKGNKAELSANDIIKDIPVLCVLDNTKTYFSVLNPLEIYLGSRYLQKDQNLSDVPDKAKGRSSLEVYSKTESDENYMAKSQCGADIPNKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQVTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1016757..1017338                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AU22_05280; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
1017816..1018784                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; AU22_05290; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
1019052..1019300                   PHAGE_Stx2_c_1717_NC_011357: transposase; AU22_05300; phage(gi209447153)             2.73e-30            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MEIDNNICENALRCVALGRRNYLFFGSDRSGEAAAIIYSLLGTCKLNGVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(1019432..1020058)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; AU22_05305; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(1020242..1020421)       hypothetical protein; AU22_05310                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MIVNLYQDNYSGYRQHGGSGVGGSNPLVPTKIPLKNQPVRAVFFMAQFPTGKLWGETGE
complement(1020418..1021104)       virulence protein; AU22_05315                                                        N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(1021375..1021566)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; AU22_05320; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
1021872..1021886                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 2 ####
1226353..1226364                   attL                                                                                 N/A                 CTTATGATCAAT
1226390..1226426                   attL                                                                                 N/A                 CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA
complement(1226471..1227550)       PHAGE_Entero_HK022_NC_002166: integrase; AU22_26365; phage(gi9634144)                2.82e-93            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MSRKKYDANLPRNLTYRKASKSFFWRNPLTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRGNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
complement(1227525..1227803)       excisionase; AU22_06570                                                              N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MTMSFVRLETWGELNYPDDPPPLTTLRRWARNGNIYPTPVLHGRTYRVDPDAFYIKPNKVGLVLEQHHPNGRTGKPSALLEKLISESKKVRC
1228217..1230196                   hypothetical protein; AU22_06575                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MRLKLIVKSFALAGLLSSTALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAHKGFIAGLPEEVIKGEQGNVIWNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTDGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKAGMDLYFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPDASGQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLRGAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLPDSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKADFDQGNYRWVAQVVSKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHINGEKAGNARAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATITLNRDTLNKIILKEETLKQAQDKGEVNVTGNAAKLDEMLGYMDKFEFWFNIVTP
complement(1230214..1230405)       hypothetical protein; AU22_06580                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MNHATTSYCHLMKKAVHNRIRTDWYQGHVLQQQIHKMKQDIKNEGKIEYKKRTELSEVTSLQH
1230828..1231133                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; AU22_06585; phage(gi423262436)     1.24e-10            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MMIINSLLYIHVENEDALKMLKFVIYGDTVKNLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDTLINELTIRAGYHE
1231197..1231796                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AU22_06590; phage(gi169257286)     2.14e-70            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWMPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTEHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
1231793..1232020                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; AU22_06595; phage(gi169257288)                  3.59e-12            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MKMTWFQHPVCTTEEADELVAGYRRRGVKVERYGEAEVLELESNNTPQRWTVEELKEIRIAALADLRALKKLEAA
1232150..1232839                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; AU22_06605; phage(gi169257244)     5.53e-112           SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MNTQYLEYVRQQLIVATADLSGATKGQLQAWLENAQLYTKNYPRKKQRIRDEVTGKMITLNNPPIAGKQSLAKGSAIPLVQPVEYSTSSWRRALLSLEEHNKAWLLWNYSENTCWEYQVTVTRWAWEKFSQQLEGKRVAKKTLARLRQLIWLAAQDVKAELARRETYEYQTLAELMGVAKSTWTETYMSHWLVMRNSFKRLDSDALISVTRSRSQQKATNLDISLAKPN
1232936..1233460                   hypothetical protein; AU22_06610                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MFYRDLFQVFGPDPLYKEEEGIAILREQYGIEAPEQIFKQIYCGLSNNSEFQTLYGHLNLKSLKWDLVRLKTAEFTKFGRNATYPDYMLEISEDFNACGSKFCIDAREEVANHWLKFGTWAEPPMFIERSLIIPGESGLHLMEGHTRLGTLLGAIKYKFVQLADTHELYIASQK
complement(1233834..1234283)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AU22_06615; phage(gi169257293)     1.10e-105           SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENSLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1234644..1235330)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; AU22_06620; phage(gi169257294)     6.16e-169           SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELRDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1235600..1235935                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; AU22_06625; phage(gi169257295)     2.16e-75            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MKMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1235922..1236371                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; AU22_06630; phage(gi169257296)     3.42e-106           SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1236389..1236868                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; AU22_26370; phage(gi169257297)     6.25e-115           SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
1237076..1237387                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AU22_06645; phage(gi169257298)     2.12e-70            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223VDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSV
1237467..1237646                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; AU22_06650; phage(gi169257312)     1.66e-35            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1237763..1238296)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; AU22_06655; phage(gi169257313)     6.02e-125           SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1238386..1239081                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; AU22_06660; phage(gi169257314)     9.41e-173           SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPGADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1239091..1239372                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; AU22_26375; phage(gi169257315)     3.30e-58            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGTVCRAC
1239351..1242585                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; AU22_26380; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223NGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETMDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAIEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKNPDGGRQQTATIFEGVAGRRMERHVGRQNRADQRRQILCGRTWTEHGRHAREDKPVPGGGGSHCLYPGKRKRDARIRHAGRPDNHEGVPEIPERADHYQWRESSGIFPDAGWKADCEKCGYQRPYQRCIWLVYGRNQCHLRVFWRDRSKRVCRYLRLKSHAGREHQGDERRTQHLNTVYRQRHLSDRENHHGDGLARWHRCHHRHDKYRPGENGGGYAVYRRDSGHVSDRRLFGLHHFTCRGYQRLSEGPWAVHHVCFRLAAGDGFPVGEQLHKLA
1242707..1242934                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AU22_06685; phage(gi169257321)     5.51e-41            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGLATDDEKAQLDEWKKYRVLVNRVDTLNPDWPEKPS
complement(1243136..1243858)       type III secretion protein SopE2; AU22_06690                                         N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKNDVFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIQNTP
1244068..1244309                   PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; AU22_06695; phage(gi169936026)         7.96e-15            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223EMERELIVERTSAGLAAAREQGQIGGRRPKLTTEQWAQPGASLGPEYRDSRRLFMMLAFRRCTENFRRVTCLCHSWENAA
complement(1244338..1245138)       hypothetical protein; AU22_06700                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MIINVGHVATEKFDTTGVSACNNQQSTSVDLSSCIINAASECTVFVRTIIKKSDSYDAMQIDRLKIDTQEKYDALNLQREHHKKFLQTIKANSFDRAMAERPENPISLSLIYSSIDSIKYNTGNCADMSLILGAIIAKYIPQRLTGIGFSKNNVFDARISTSLMYNSASGGNHVVVFLTFTDSKGISEYILDPWLDARIFKKEESYEIYKNNSSEYINENHCFEAYDKYTAIMNSAEYIDAITKTINLLYRVNLDEIQLTNPFKFI
1246011..1246047                   attR                                                                                 N/A                 CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA
complement(1246083..1246352)       PHAGE_Entero_HK022_NC_002166: integrase; AU22_06705; phage(gi9634144)                3.53e-15            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MISAGIRKNSPTGNIHPDGLTKKFVKARKISDVKCSDNPPTFHEIRSLLGRLYKDERGEEFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(1246367..1246936)       PHAGE_Entero_HK022_NC_002166: integrase; AU22_06710; phage(gi9634144)                1.88e-47            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEMILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRTAAEYLPVWFPLAMDLALVTGQRREDIVNMKFSDIVDGRLHVTQIKTGMKIAFPLSLTLQAPGLRPGRLSIAADW
complement(1246996..1247649)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; AU22_06715; phage(gi169257272)     1.20e-15            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKPQPTGELADEPATPEAVEQDTTEHHPAPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVHNNYSASNQGEKEEVVQEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
1247680..1247910                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; AU22_06720; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1247964..1248497                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AU22_06725; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1248754..1248921)       lytic enzyme; AU22_06730                                                             N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1248986..1249174)       hypothetical protein; AU22_26385                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKYEQLSTTTT
1249229..1249720                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AU22_06735; phage(gi169257298)     1.78e-36            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MDGELKNLKCNICQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGRFWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWSDKLERDKGWSADQLNEAQDVVDEARILLVKAIQETADDDGE
1249707..1249886                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; AU22_06740; phage(gi169257185)     6.07e-29            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGIKQFMFVPRGANTAVPWDDTLASQSFPK
1249906..1250280                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; AU22_06745; phage(gi169257299)     3.62e-69            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MFRDGSFLQIGWPSITVFSSSDYKRVALTDYDRFPEDIDGEGDGFSLASKRTTTFMSAGMTPAESSPGREITDVKWRRSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGDWFQSAMENMVGYG
1250273..1250869                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AU22_06750; phage(gi169257320)     5.26e-120           SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MGEVQTKAPLDSLALTGTPTAPMPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYVGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEY
1251190..1251876                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AU22_26390; phage(gi16765208)     1.98e-90            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MDGNKSHSYTARAQDIDLGTKTTSSFDYGTKSTNTTGNHTNQFGGYINSYWGDSNHTSFQLGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVVADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPDSVARQIVLI
1252089..1252325                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AU22_26395; phage(gi16765208)     9.15e-47            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MNDEAAEAAARLREAEGTKNRLLQITSEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1252422..1252622)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; AU22_26400; phage(gi169257211)     1.14e-41            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MKHVKSVFLAMVLILPSSLYSALTIAADSQDHKKEETIKPIPQKWCTLWPAGIPFPEDWFKMCRGY
1257468..1257479                   attR                                                                                 N/A                 CTTATGATCAAT

#### region 3 ####
1466674..1466686                   attL                                                                                 N/A                 CTTTTTTGAATTA
1467011..1468384                   PHAGE_Entero_CAjan_NC_028776: helicase-like protein; AU22_08000; phage(gi971742387)     3.74e-06            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQPASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPSLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
complement(1468428..1469363)       tRNA 2-thiocytidine(32) synthetase TtcA; AU22_08005                                  N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MQEIQKNTKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIVRFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVDGGDLAFDREEIPLQPAGWQPEEDDTALEALRLDVIEVK
complement(1469415..1469699)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AU22_26485; phage(gi18249865)     2.93e-32            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223FMPRMSKGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
complement(1469680..1470297)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; AU22_08020; phage(gi985761253)     1.22e-47            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MSDNKTEYSYYIKVKNESARKRLGFPFAFWWKTESSEAAATARLAVSMLDAGFEPTDFAKPVRVNSPAVNELPPEGSFDTTFCQKYELGGEDGKTFMLIPGTPATDAHDEKTEECADDAGTEESGTDTSDNDECQDCEVSVATLPFPQRVLHIFTYAATDKKYLHHATRAQRRHITVLEMEQENSYIQNLLMVLRKSEQVHAQDE
complement(1470325..1470642)       hypothetical protein; AU22_08025                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MKNVPESVIAELRQLSGKIRTLCIENNMPCVVSYARDCDDESVSRTLVAYTDSETGAYDRSITAAIMLLKMNEAPPENFISLLKLMECKELVTNAFCSMKNESLH
complement(1470727..1470948)       PHAGE_Shigel_Stx_NC_029120: Kil protein; AU22_08030; phage(gi985761255)              1.16e-40            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MIAHHFGTDEIPRQCITPGDYVIHDGRTYIASANNIKKRRLYIRDLTTQRCITDCMVKVWLNRNGLPAKAESW
1471386..1471907                   hypothetical protein; AU22_08040                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MSETALVIVKFLIGKSVGQFMLTVALFFLIIIFIPRDITELIEARSDLPYAVQIFSFAVAYLIVLILKVTGYFFVSALPLCQRRGRAKRMLKTLNSLSTEQLFLLEPFLKTHSPTFRASWDNPDADALVKAGIVRPAGSCIDGVSVMFKIEPEYESLMLSTWNPCTKRFDISR
complement(1472015..1472179)       PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; AU22_26490; phage(gi472340166)     7.43e-11            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MDKLQKIHLGNNESLVCGVFPNQDGTFTAMTYTRSRTFKTETGARRWLERNSGE
complement(1472555..1473022)       PHAGE_Pseudo_F116_NC_006552: transcriptional regulator; AU22_08060; phage(gi56692918)     1.71e-10            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MRKKREEIAPPEATQRLRAIWDAKKRDLKLTQEIAADLMGFETQSTVSHYLNGKAPLNTDAALKFSVLLRVKPEELRPDLADLMNYVRSSGTYDDNFEGGGWRMVSRQQADLLNLFDILPESEKEKLIDRLKGQNELYKEAFQNMLAAQKRLKNQ
1473295..1473624                   PHAGE_Shigel_Stx_NC_029120: LygF; AU22_08070; phage(gi985761265)                     4.59e-22            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MNSGLITLTELRRMTGLTIYSTRHYLDKAERCGDVYQAGRRGGIFPSEEAYRAWKKQAKVDADLIWKLPDGEVRRYDRHHNVICRECRKSEYMQRVLAFYRGNFQEVLL
complement(1473786..1474340)       hypothetical protein; AU22_08075                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MNKINVLGVIIKHYKTMSDQRGTMLMSDITVHFIVPLSLSFVLCWTYGIMKPAIASVFVNFGAITTALLMSAVIMIYEQKQKTITKISDIIEGNKSRDKLISLNTNKTIYEQLCHNVAYAILTSIVLVIFSVIIYFLPDNAVDLMKWYFRAPAYIVSFLAYTSFFITVITFLMVIKRFSTILDN
complement(1474337..1475269)       hypothetical protein; AU22_08080                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MHSVNFYSFRVLTHKGSRASKKLNDLGLSNKKTAYELFVDYFTLYKNTPIEFGVSKTKISLEQHTKLHFDNTKKIIYGYIKVGKYGESSEIKDVKLKKVHYRTTAYDVTLKERYILIYLPDNLEEGIIAFHSCDNISARGVLSDSITEYLKKQFQLEARINPLHHKKIPQYILNSELKQIKAQGYKAPEDIADSFGKNKTNIKTDLIIKANDGIFGSFRDLRNKNIGNIIEIIEDKCDAIKVSLQLGSRTVVFNYDTILKKGISAELDDNDLKIDPLTGIPDLTALHDTIKNLSNDILEELHCGNKGVII
complement(1475450..1475594)       hypothetical protein; AU22_26495                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MLTGAFLYLPFGVHAGRPQAPATILLNSPFPANRFYPQRKFYQYPLA
1475639..1475851                   PHAGE_Entero_933W_NC_000924: protein MokW; AU22_08085; phage(gi9632542)              2.64e-39            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MLCTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
1476375..1476974                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; AU22_08095; phage(gi435439315)     1.47e-71            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MAHLQLVKQTSSGLLLPATPESEDFLRSVKIGAWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPIGGAILPQEQELITGFVDFLCESAAQGHSPALSDAAEQYLHKVAVNRTLDVALLKSFDAFREWVTIQAGFYTEHYYPDGSRGRRAKSIAFANMDETEFQQVYKAVLNVLWNWILFRKFSSPEEVENVAAQLLEFA
1476974..1477264                   PHAGE_Shigel_Stx_NC_029120: hypothetical protein; AU22_08100; phage(gi985761275)     1.41e-30            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MADLRKAARGLMCTVRIPGHCNHNPETSVLAHYRLAGTCGTATKPNDMQAAIACSSCHDIVDGRVKIDDFTKTEIRLMHAEGVFRTQEIWREKGIL
1477261..1477797                   PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; AU22_08105; phage(gi100055)       6.94e-07            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MIYPTNTGKSGEHLRLSTLESVWIQGKLRMWGRWSYIGGGKTGNMFNQLLASKKLTKTAINDALRRMKKAGLEKPELEVFLREMINGKQKSWLAHCTDTEALIIDRVVGEVLTDHPGLLGILNQRYVGRGMSKRRMAELLNEQYPEWALITCRRRVEQWLSIAEFILYSPMRKAFDYA
1478822..1478834                   attR                                                                                 N/A                 CTTTTTTGAATTA
1479168..1479179                   attL                                                                                 N/A                 CAATTTTTTTAC
1479968..1480363                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AU22_08110; phage(gi100118)       1.12e-62            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MLGIFRKKTRKAIVEVKKMENRDAVEATVWGAYSIAYADGTCDAKEIAVLEKTIAALPAFAPFSGEIAQMSANIRARYEASPRSANAQALRELADVAGTAEAVDVLCLYWPRSCPALLTTTVNRWMRCVQW
1480463..1480744                   PHAGE_Entero_phiP27_NC_003356: putative holin; AU22_08120; phage(gi18249893)         2.47e-24            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MESNLTGTLNAGLCLVTVLALFLYRRNGARYKPGIAWLSYLLMLGYALVPFRFLAGHYPSSSWPVVLMNALFCGLVLWARGNVSKILSLLRLR
1480741..1481286                   PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; AU22_08125; phage(gi422935930)         1.04e-86            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MKPKDEIFDEILGKEGGYVNHPDDKGGPTKWGITEKVARAHGYRGDMRNLTRGQALEILETDYWYGPRFDRVAKASPDVAAELCDTGVNMGPSVAAKMLQRWLNVFNQGGRLYPDMDTDGRIGPRTLNALRVYLEKRGKDGERVLLVALNCTQGERYLELAEKREADESFVYGWMKERVLI
complement(1481828..1481968)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AU22_08135; phage(gi18249865)     6.30e-16            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
1481987..1482139                   multidrug transporter; AU22_08140                                                    N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MSRMVRITATNASTFLWQDTQWFKSVFILSSVLLKISSRPEKYWNEEMYD
1482132..1482470                   PHAGE_Acinet_ZZ1_NC_018087: putative quaternary ammonium compound-resistance protein qacE; AU22_08145; phage(gi392973036)     3.10e-13            SalmonellaentericasubspentericaserovarEnteritidisstrEC20110223MTKEAVIFLFIAIVVEVIATISLKLSDSFTRLVPSLVTIIGYCIAFWCLTIPMRTIPAGIIYAIWSGVGIVLIGLIGWLFLGQKLDMPAIIGMLLIICGVIVINLFSKSVSH
1492466..1492477                   attR                                                                                 N/A                 CAATTTTTTTAC
