gi|00000000|ref|CP007300.2|  Salmonella enterica subsp. enterica serovar Enteritidis str. 4685839, gc%: 51.72%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1011984..1013186)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; AU99_05240; phage(gi100242)     1.40e-49            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS
1013332..1013346                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1013381..1013791)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; AU99_25370; phage(gi169257271)     1.46e-44            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
1013812..1014441                   hypothetical protein; AU99_05260                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MYGVQGTPDCYRIELKNVYGVQENLISYRQASLGAWVAIAGGGDPYEVAYAIYKAVPDISVLTNDVVNPSGAAVDKKTIPIIVYPDTYHVPFVVPSSQNVTLLITWNTASTSYIDPTGIEKAVQQSIADYINGIATGEPINIFLIRDIFLNQVKGLVSSNLVSMIDIQVGINGKIVPPATDSSLVYGDTYAYFSTSSSQIQVKQYGSSS
1014425..1015051                   hypothetical protein; AU99_05265                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MAALLESIIPAYPYTQYNDDPDIVAFFDAYNKLAQGYLDYFNNLNLPCWTSPAITGELLDWIAAGIYGESRPLLQISEDAIARGAYNTIEYNNVAYAKLRNYVPGSASYVPDDYFKRILTWNFYKGDGSHFCINWFKRRLARFIHGANGIDPPVQSTFDISVMPDKGIFFVSIPDYGDGVGHFLKDAIDQSLVKLPFIYTYSVTVVEQ
1015048..1016757                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AU99_05270; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MIIGFGNNVVSSLAADITASQTTIQVMPGVGAMFANLLTSDYANSSNPLKTYAKITLTDAKETVFEVCHLTAVNNDMLTVIRGQEGTTAKGWSLNDVIANFATRGSENQFVQIEELQSGHYVAGVAGGTENNLTLELPATYFVNGGVDWTLRTPLVVIPALNNTGASTLQLTMGGRVLGIFPLYKGNKAELSANDIIKDIPVLCVLDNTKTYFSVLNPLEIYLGSRYLQKDQNLSDVPDKAKGRSSLEVYSKTESDENYMAKSQCGADIPNKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQVTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1016757..1017338                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AU99_05275; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
1017816..1018784                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; AU99_05285; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
1019052..1019300                   PHAGE_Stx2_c_1717_NC_011357: transposase; AU99_05295; phage(gi209447153)             2.73e-30            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MEIDNNICENALRCVALGRRNYLFFGSDRSGEAAAIIYSLLGTCKLNGVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(1019432..1020058)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; AU99_05300; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(1020242..1020421)       hypothetical protein; AU99_05305                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MIVNLYQDNYSGYRQHGGSGVGGSNPLVPTKIPLKNQPVRAVFFMAQFPTGKLWGETGE
complement(1020418..1021104)       virulence protein; AU99_05310                                                        N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(1021375..1021566)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; AU99_05315; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
1021872..1021886                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 2 ####
1226353..1226364                   attL                                                                                 N/A                 CTTATGATCAAT
1226390..1226426                   attL                                                                                 N/A                 CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA
complement(1226471..1227550)       PHAGE_Entero_HK022_NC_002166: integrase; AU99_25415; phage(gi9634144)                2.82e-93            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MSRKKYDANLPRNLTYRKASKSFFWRNPLTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRGNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
complement(1227525..1227803)       excisionase; AU99_06570                                                              N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MTMSFVRLETWGELNYPDDPPPLTTLRRWARNGNIYPTPVLHGRTYRVDPDAFYIKPNKVGLVLEQHHPNGRTGKPSALLEKLISESKKVRC
1228217..1230196                   hypothetical protein; AU99_06575                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MRLKLIVKSFALAGLLSSTALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAHKGFIAGLPEEVIKGEQGNVIWNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTDGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKAGMDLYFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPDASGQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLRGAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLPDSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKADFDQGNYRWVAQVVSKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHINGEKAGNARAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATITLNRDTLNKIILKEETLKQAQDKGEVNVTGNAAKLDEMLGYMDKFEFWFNIVTP
complement(1230214..1230405)       hypothetical protein; AU99_06580                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MNHATTSYCHLMKKAVHNRIRTDWYQGHVLQQQIHKMKQDIKNEGKIEYKKRTELSEVTSLQH
1230828..1231133                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; AU99_06585; phage(gi423262436)     1.24e-10            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MMIINSLLYIHVENEDALKMLKFVIYGDTVKNLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDTLINELTIRAGYHE
1231197..1231796                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AU99_06590; phage(gi169257286)     2.14e-70            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWMPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTEHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
1231793..1232020                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; AU99_06595; phage(gi169257288)                  3.59e-12            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MKMTWFQHPVCTTEEADELVAGYRRRGVKVERYGEAEVLELESNNTPQRWTVEELKEIRIAALADLRALKKLEAA
1232150..1232839                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; AU99_06605; phage(gi169257244)     5.53e-112           SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MNTQYLEYVRQQLIVATADLSGATKGQLQAWLENAQLYTKNYPRKKQRIRDEVTGKMITLNNPPIAGKQSLAKGSAIPLVQPVEYSTSSWRRALLSLEEHNKAWLLWNYSENTCWEYQVTVTRWAWEKFSQQLEGKRVAKKTLARLRQLIWLAAQDVKAELARRETYEYQTLAELMGVAKSTWTETYMSHWLVMRNSFKRLDSDALISVTRSRSQQKATNLDISLAKPN
1232936..1233460                   hypothetical protein; AU99_06610                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MFYRDLFQVFGPDPLYKEEEGIAILREQYGIEAPEQIFKQIYCGLSNNSEFQTLYGHLNLKSLKWDLVRLKTAEFTKFGRNATYPDYMLEISEDFNACGSKFCIDAREEVANHWLKFGTWAEPPMFIERSLIIPGESGLHLMEGHTRLGTLLGAIKYKFVQLADTHELYIASQK
complement(1233834..1234283)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AU99_06615; phage(gi169257293)     1.10e-105           SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENSLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1234644..1235330)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; AU99_06620; phage(gi169257294)     6.16e-169           SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELRDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1235600..1235935                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; AU99_06625; phage(gi169257295)     2.16e-75            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MKMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1235922..1236371                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; AU99_06630; phage(gi169257296)     3.42e-106           SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1236389..1236868                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; AU99_06635; phage(gi169257297)     6.25e-115           SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
1237076..1237387                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AU99_06640; phage(gi169257298)     2.12e-70            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877VDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSV
1237467..1237646                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; AU99_06650; phage(gi169257312)     1.66e-35            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1237763..1238296)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; AU99_06655; phage(gi169257313)     6.02e-125           SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1238386..1239081                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; AU99_06660; phage(gi169257314)     9.41e-173           SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPGADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1239091..1239372                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; AU99_25420; phage(gi169257315)     3.30e-58            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGTVCRAC
1239351..1242585                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; AU99_25425; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877NGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETMDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAIEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKNPDGGRQQTATIFEGVAGRRMERHVGRQNRADQRRQILCGRTWTEHGRHAREDKPVPGGGGSHCLYPGKRKRDARIRHAGRPDNHEGVPEIPERADHYQWRESSGIFPDAGWKADCEKCGYQRPYQRCIWLVYGRNQCHLRVFWRDRSKRVCRYLRLKSHAGREHQGDERRTQHLNTVYRQRHLSDRENHHGDGLARWHRCHHRHDKYRPGENGGGYAVYRRDSGHVSDRRLFGLHHFTCRGYQRLSEGPWAVHHVCFRLAAGDGFPVGEQLHKLA
1242707..1242934                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AU99_06685; phage(gi169257321)     5.51e-41            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGLATDDEKAQLDEWKKYRVLVNRVDTLNPDWPEKPS
complement(1243136..1243858)       type III secretion protein SopE2; AU99_06690                                         N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKNDVFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIQNTP
1244068..1244309                   PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; AU99_06695; phage(gi169936026)         7.96e-15            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877EMERELIVERTSAGLAAAREQGQIGGRRPKLTTEQWAQPGASLGPEYRDSRRLFMMLAFRRCTENFRRVTCLCHSWENAA
complement(1244338..1245138)       hypothetical protein; AU99_06700                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MIINVGHVATEKFDTTGVSACNNQQSTSVDLSSCIINAASECTVFVRTIIKKSDSYDAMQIDRLKIDTQEKYDALNLQREHHKKFLQTIKANSFDRAMAERPENPISLSLIYSSIDSIKYNTGNCADMSLILGAIIAKYIPQRLTGIGFSKNNVFDARISTSLMYNSASGGNHVVVFLTFTDSKGISEYILDPWLDARIFKKEESYEIYKNNSSEYINENHCFEAYDKYTAIMNSAEYIDAITKTINLLYRVNLDEIQLTNPFKFI
1246011..1246047                   attR                                                                                 N/A                 CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA
complement(1246083..1246352)       PHAGE_Entero_HK022_NC_002166: integrase; AU99_06705; phage(gi9634144)                3.53e-15            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MISAGIRKNSPTGNIHPDGLTKKFVKARKISDVKCSDNPPTFHEIRSLLGRLYKDERGEEFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(1246367..1246936)       PHAGE_Entero_HK022_NC_002166: integrase; AU99_06710; phage(gi9634144)                1.88e-47            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEMILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRTAAEYLPVWFPLAMDLALVTGQRREDIVNMKFSDIVDGRLHVTQIKTGMKIAFPLSLTLQAPGLRPGRLSIAADW
complement(1246996..1247649)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; AU99_06715; phage(gi169257272)     1.20e-15            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKPQPTGELADEPATPEAVEQDTTEHHPAPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVHNNYSASNQGEKEEVVQEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
1247680..1247910                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; AU99_06720; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1247964..1248497                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AU99_06725; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1248754..1248921)       lytic enzyme; AU99_06730                                                             N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1248986..1249174)       hypothetical protein; AU99_25430                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKYEQLSTTTT
1249229..1249720                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AU99_06735; phage(gi169257298)     2.41e-35            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MDGELKNLKCNICQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMETPVSQAAEHQGPNKMTPKERKNWFDSEKGRFWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWSDKLERDKGWSADQLNEAQDVVDEARILLVKAIQETADDDGE
1249707..1249886                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; AU99_06740; phage(gi169257185)     6.07e-29            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGIKQFMFVPRGANTAVPWDDTLASQSFPK
1249906..1250280                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; AU99_06745; phage(gi169257299)     3.62e-69            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MFRDGSFLQIGWPSITVFSSSDYKRVALTDYDRFPEDIDGEGDGFSLASKRTTTFMSAGMTPAESSPGREITDVKWRRSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGDWFQSAMENMVGYG
1250273..1250869                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AU99_06750; phage(gi169257320)     5.26e-120           SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MGEVQTKAPLDSLALTGTPTAPMPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYVGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEY
1251190..1251876                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AU99_25435; phage(gi16765208)     1.98e-90            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MDGNKSHSYTARAQDIDLGTKTTSSFDYGTKSTNTTGNHTNQFGGYINSYWGDSNHTSFQLGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVVADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPDSVARQIVLI
1252089..1252325                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AU99_25440; phage(gi16765208)     9.15e-47            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MNDEAAEAAARLREAEGTKNRLLQITSEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1252422..1252622)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; AU99_25445; phage(gi169257211)     1.14e-41            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MKHVKSVFLAMVLILPSSLYSALTIAADSQDHKKEETIKPIPQKWCTLWPAGIPFPEDWFKMCRGY
1257468..1257479                   attR                                                                                 N/A                 CTTATGATCAAT

#### region 3 ####
1466674..1466686                   attL                                                                                 N/A                 CTTTTTTGAATTA
1467011..1468384                   PHAGE_Entero_CAjan_NC_028776: helicase-like protein; AU99_08005; phage(gi971742387)     3.74e-06            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQPASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPSLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
complement(1468428..1469363)       tRNA 2-thiocytidine(32) synthetase TtcA; AU99_08010                                  N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MQEIQKNTKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIVRFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVDGGDLAFDREEIPLQPAGWQPEEDDTALEALRLDVIEVK
complement(1469415..1469699)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AU99_25540; phage(gi18249865)     2.93e-32            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877FMPRMSKGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
complement(1469680..1470297)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; AU99_08025; phage(gi985761253)     1.22e-47            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MSDNKTEYSYYIKVKNESARKRLGFPFAFWWKTESSEAAATARLAVSMLDAGFEPTDFAKPVRVNSPAVNELPPEGSFDTTFCQKYELGGEDGKTFMLIPGTPATDAHDEKTEECADDAGTEESGTDTSDNDECQDCEVSVATLPFPQRVLHIFTYAATDKKYLHHATRAQRRHITVLEMEQENSYIQNLLMVLRKSEQVHAQDE
complement(1470325..1470642)       hypothetical protein; AU99_08030                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MKNVPESVIAELRQLSGKIRTLCIENNMPCVVSYARDCDDESVSRTLVAYTDSETGAYDRSITAAIMLLKMNEAPPENFISLLKLMECKELVTNAFCSMKNESLH
complement(1470727..1470948)       PHAGE_Shigel_Stx_NC_029120: Kil protein; AU99_08035; phage(gi985761255)              1.16e-40            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MIAHHFGTDEIPRQCITPGDYVIHDGRTYIASANNIKKRRLYIRDLTTQRCITDCMVKVWLNRNGLPAKAESW
1471386..1471907                   hypothetical protein; AU99_08045                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MSETALVIVKFLIGKSVGQFMLTVALFFLIIIFIPRDITELIEARSDLPYAVQIFSFAVAYLIVLILKVTGYFFVSALPLCQRRGRAKRMLKTLNSLSTEQLFLLEPFLKTHSPTFRASWDNPDADALVKAGIVRPAGSCIDGVSVMFKIEPEYESLMLSTWNPCTKRFDISR
complement(1472015..1472179)       PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; AU99_25545; phage(gi472340166)     7.43e-11            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MDKLQKIHLGNNESLVCGVFPNQDGTFTAMTYTRSRTFKTETGARRWLERNSGE
complement(1472555..1473022)       PHAGE_Pseudo_F116_NC_006552: transcriptional regulator; AU99_08065; phage(gi56692918)     1.50e-10            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MRKKREEIAPPEATQRLRAIWDAKKRDLKLTQEIAADLMGFETQSTVSHYLNGKAPLNTDAALKFSVLLRVKPEELRPDLADLMNYVRSSGTYDDNFEGGGWRMVSRQQADLLNLFDILPESEKEKLIDRLKGQNELXKEAFQNMLAAQKRLKNQ
1473295..1473624                   PHAGE_Shigel_Stx_NC_029120: LygF; AU99_08075; phage(gi985761265)                     4.59e-22            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MNSGLITLTELRRMTGLTIYSTRHYLDKAERCGDVYQAGRRGGIFPSEEAYRAWKKQAKVDADLIWKLPDGEVRRYDRHHNVICRECRKSEYMQRVLAFYRGNFQEVLL
complement(1473786..1474340)       hypothetical protein; AU99_08080                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MNKINVLGVIIKHYKTMSDQRGTMLMSDITVHFIVPLSLSFVLCWTYGIMKPAIASVFVNFGAITTALLMSAVIMIYEQKQKTITKISDIIEGNKSRDKLISLNTNKTIYEQLCHNVAYAILTSIVLVIFSVIIYFLPDNAVDLMKWYFRAPAYIVSFLAYTSFFITVITFLMVIKRFSTILDN
complement(1474337..1475269)       hypothetical protein; AU99_08085                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MHSVNFYSFRVLTHKGSRASKKLNDLGLSNKKTAYELFVDYFTLYKNTPIEFGVSKTKISLEQHTKLHFDNTKKIIYGYIKVGKYGESSEIKDVKLKKVHYRTTAYDVTLKERYILIYLPDNLEEGIIAFHSCDNISARGVLSDSITEYLKKQFQLEARINPLHHKKIPQYILNSELKQIKAQGYKAPEDIADSFGKNKTNIKTDLIIKANDGIFGSFRDLRNKNIGNIIEIIEDKCDAIKVSLQLGSRTVVFNYDTILKKGISAELDDNDLKIDPLTGIPDLTALHDTIKNLSNDILEELHCGNKGVII
complement(1475450..1475594)       hypothetical protein; AU99_25550                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MLTGAFLYLPFGVHAGRPQAPATILLNSPFPANRFYPQRKFYQYPLA
1475639..1475851                   PHAGE_Entero_933W_NC_000924: protein MokW; AU99_08090; phage(gi9632542)              2.64e-39            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MLCTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
1476375..1476974                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; AU99_08100; phage(gi435439315)     1.47e-71            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MAHLQLVKQTSSGLLLPATPESEDFLRSVKIGAWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPIGGAILPQEQELITGFVDFLCESAAQGHSPALSDAAEQYLHKVAVNRTLDVALLKSFDAFREWVTIQAGFYTEHYYPDGSRGRRAKSIAFANMDETEFQQVYKAVLNVLWNWILFRKFSSPEEVENVAAQLLEFA
1476974..1477264                   PHAGE_Shigel_Stx_NC_029120: hypothetical protein; AU99_08105; phage(gi985761275)     1.41e-30            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MADLRKAARGLMCTVRIPGHCNHNPETSVLAHYRLAGTCGTATKPNDMQAAIACSSCHDIVDGRVKIDDFTKTEIRLMHAEGVFRTQEIWREKGIL
1477261..1477797                   PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; AU99_08110; phage(gi100055)       6.94e-07            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MIYPTNTGKSGEHLRLSTLESVWIQGKLRMWGRWSYIGGGKTGNMFNQLLASKKLTKTAINDALRRMKKAGLEKPELEVFLREMINGKQKSWLAHCTDTEALIIDRVVGEVLTDHPGLLGILNQRYVGRGMSKRRMAELLNEQYPEWALITCRRRVEQWLSIAEFILYSPMRKAFDYA
1478822..1478834                   attR                                                                                 N/A                 CTTTTTTGAATTA
1479168..1479179                   attL                                                                                 N/A                 CAATTTTTTTAC
1479968..1480363                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AU99_08115; phage(gi100118)       1.12e-62            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MLGIFRKKTRKAIVEVKKMENRDAVEATVWGAYSIAYADGTCDAKEIAVLEKTIAALPAFAPFSGEIAQMSANIRARYEASPRSANAQALRELADVAGTAEAVDVLCLYWPRSCPALLTTTVNRWMRCVQW
1480463..1480744                   PHAGE_Entero_phiP27_NC_003356: putative holin; AU99_08125; phage(gi18249893)         2.47e-24            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MESNLTGTLNAGLCLVTVLALFLYRRNGARYKPGIAWLSYLLMLGYALVPFRFLAGHYPSSSWPVVLMNALFCGLVLWARGNVSKILSLLRLR
1480741..1481286                   PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; AU99_08130; phage(gi422935930)         1.04e-86            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MKPKDEIFDEILGKEGGYVNHPDDKGGPTKWGITEKVARAHGYRGDMRNLTRGQALEILETDYWYGPRFDRVAKASPDVAAELCDTGVNMGPSVAAKMLQRWLNVFNQGGRLYPDMDTDGRIGPRTLNALRVYLEKRGKDGERVLLVALNCTQGERYLELAEKREADESFVYGWMKERVLI
complement(1481828..1481968)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AU99_08140; phage(gi18249865)     6.30e-16            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
1481987..1482139                   multidrug transporter; AU99_08145                                                    N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MSRMVRITATNASTFLWQDTQWFKSVFILSSVLLKISSRPEKYWNEEMYD
1482132..1482470                   PHAGE_Acinet_ZZ1_NC_018087: putative quaternary ammonium compound-resistance protein qacE; AU99_08150; phage(gi392973036)     3.10e-13            SalmonellaentericasubspentericaserovarEnteritidisstrSA20090877MTKEAVIFLFIAIVVEVIATISLKLSDSFTRLVPSLVTIIGYCIAFWCLTIPMRTIPAGIIYAIWSGVGIVLIGLIGWLFLGQKLDMPAIIGMLLIICGVIVINLFSKSVSH
1492466..1492477                   attR                                                                                 N/A                 CAATTTTTTTAC
