gi|00000000|ref|CP007332.2|  Salmonella enterica subsp. enterica serovar Enteritidis str. 4685848, gc%: 51.74%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1011984..1013186)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; AV48_16625; phage(gi100242)     1.40e-49            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS
1013332..1013346                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1013381..1013791)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; AV48_27365; phage(gi169257271)     1.46e-44            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
1013812..1014441                   hypothetical protein; AV48_16605                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MYGVQGTPDCYRIELKNVYGVQENLISYRQASLGAWVAIAGGGDPYEVAYAIYKAVPDISVLTNDVVNPSGAAVDKKTIPIIVYPDTYHVPFVVPSSQNVTLLITWNTASTSYIDPTGIEKAVQQSIADYINGIATGEPINIFLIRDIFLNQVKGLVSSNLVSMIDIQVGINGKIVPPATDSSLVYGDTYAYFSTSSSQIQVKQYGSSS
1014425..1015051                   hypothetical protein; AV48_16600                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MAALLESIIPAYPYTQYNDDPDIVAFFDAYNKLAQGYLDYFNNLNLPCWTSPAITGELLDWIAAGIYGESRPLLQISEDAIARGAYNTIEYNNVAYAKLRNYVPGSASYVPDDYFKRILTWNFYKGDGSHFCINWFKRRLARFIHGANGIDPPVQSTFDISVMPDKGIFFVSIPDYGDGVGHFLKDAIDQSLVKLPFIYTYSVTVVEQ
1015048..1016757                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AV48_16595; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MIIGFGNNVVSSLAADITASQTTIQVMPGVGAMFANLLTSDYANSSNPLKTYAKITLTDAKETVFEVCHLTAVNNDMLTVIRGQEGTTAKGWSLNDVIANFATRGSENQFVQIEELQSGHYVAGVAGGTENNLTLELPATYFVNGGVDWTLRTPLVVIPALNNTGASTLQLTMGGRVLGIFPLYKGNKAELSANDIIKDIPVLCVLDNTKTYFSVLNPLEIYLGSRYLQKDQNLSDVPDKAKGRSSLEVYSKTESDENYMAKSQCGADIPNKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQVTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1016757..1017338                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AV48_16590; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
complement(1017342..1017590)       PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; AV48_16585; phage(gi100034)     1.08e-24            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MRHQRPGVQFWRAEVTRQKLLNDADNAIKDWRTELTLGIISDENKAALILPMNYINVLKSLDLTGVSDEATFTAIRWPALPQ
1017561..1017647                   phage tail protein; AV48_27370                                                       N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916KLNARALMPDDLVIVESDPEKIDTLAVK
1017816..1018784                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; AV48_16580; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
1018882..1019300                   PHAGE_Stx2_c_1717_NC_011357: transposase; AV48_27375; phage(gi209447153)             8.00e-06            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916SPAQTRLSVRKEKSQSLYDWIQAQLKTLSVHAEMAKEFGYMLKQCDALSVSSAATVGWRSTTTSVKTPYGAWRWADVTICSSAQTGAARQRRSSTACWVRANTASPRHGYATCCGKSATGHRTGCTNCCPGTSKPNAA
complement(1019432..1020058)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; AV48_16565; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(1020127..1020433)       hypothetical protein; AV48_27380                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916VYHFMIVNLYQDNYSGYRQHGGSGVGGSNPLVPTKIPLKNQPVRAVFFMAQFPTGKLWGETGESRRDSTQFAIDSSVCSLLSFGIHQYTNFHFELLYKFPVA
complement(1020418..1021104)       virulence protein; AV48_16555                                                        N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(1021375..1021566)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; AV48_03985; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
1021872..1021886                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 2 ####
1226375..1226387                   attL                                                                                 N/A                 TTTCCGAAATTTT
1226390..1226426                   attL                                                                                 N/A                 CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA
complement(1226471..1227550)       PHAGE_Entero_HK022_NC_002166: integrase; AV48_27485; phage(gi9634144)                2.82e-93            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MSRKKYDANLPRNLTYRKASKSFFWRNPLTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRGNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
complement(1227525..1227803)       excisionase; AV48_04725                                                              N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MTMSFVRLETWGELNYPDDPPPLTTLRRWARNGNIYPTPVLHGRTYRVDPDAFYIKPNKVGLVLEQHHPNGRTGKPSALLEKLISESKKVRC
1228217..1230196                   hypothetical protein; AV48_04720                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MRLKLIVKSFALAGLLSSTALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAHKGFIAGLPEEVIKGEQGNVIWNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTDGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKAGMDLYFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPDASGQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLRGAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLPDSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKADFDQGNYRWVAQVVSKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHINGEKAGNARAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATITLNRDTLNKIILKEETLKQAQDKGEVNVTGNAAKLDEMLGYMDKFEFWFNIVTP
complement(1230214..1230405)       hypothetical protein; AV48_04715                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MNHATTSYCHLMKKAVHNRIRTDWYQGHVLQQQIHKMKQDIKNEGKIEYKKRTELSEVTSLQH
1230828..1231133                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; AV48_04710; phage(gi423262436)     1.24e-10            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MMIINSLLYIHVENEDALKMLKFVIYGDTVKNLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDTLINELTIRAGYHE
1231197..1231796                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AV48_04705; phage(gi169257286)     2.14e-70            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWMPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTEHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
1231793..1232020                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; AV48_04700; phage(gi169257288)                  3.59e-12            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MKMTWFQHPVCTTEEADELVAGYRRRGVKVERYGEAEVLELESNNTPQRWTVEELKEIRIAALADLRALKKLEAA
1232017..1232153                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; AV48_27490; phage(gi435439319)     8.47e-05            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MTFESYFADHLRARWQLCLYHFRVPSSITGFKTTRRAVPYGA
1232150..1232839                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; AV48_04690; phage(gi169257244)     5.53e-112           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MNTQYLEYVRQQLIVATADLSGATKGQLQAWLENAQLYTKNYPRKKQRIRDEVTGKMITLNNPPIAGKQSLAKGSAIPLVQPVEYSTSSWRRALLSLEEHNKAWLLWNYSENTCWEYQVTVTRWAWEKFSQQLEGKRVAKKTLARLRQLIWLAAQDVKAELARRETYEYQTLAELMGVAKSTWTETYMSHWLVMRNSFKRLDSDALISVTRSRSQQKATNLDISLAKPN
1232936..1233460                   hypothetical protein; AV48_04685                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MFYRDLFQVFGPDPLYKEEEGIAILREQYGIEAPEQIFKQIYCGLSNNSEFQTLYGHLNLKSLKWDLVRLKTAEFTKFGRNATYPDYMLEISEDFNACGSKFCIDAREEVANHWLKFGTWAEPPMFIERSLIIPGESGLHLMEGHTRLGTLLGAIKYKFVQLADTHELYIASQK
complement(1233834..1234283)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AV48_04680; phage(gi169257293)     1.10e-105           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENSLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1234644..1235330)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; AV48_04675; phage(gi169257294)     6.16e-169           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELRDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1235606..1235935                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; AV48_04670; phage(gi169257295)     1.03e-73            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1235919..1236371                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; AV48_04665; phage(gi169257296)     3.75e-107           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1236389..1236868                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; AV48_27495; phage(gi169257297)     6.25e-115           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
1237076..1237387                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AV48_04650; phage(gi169257298)     2.12e-70            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916VDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSV
1237386..1237646                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; AV48_04640; phage(gi169257312)     7.49e-56            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916FKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1237763..1238296)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; AV48_04635; phage(gi169257313)     6.02e-125           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1238386..1239081                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; AV48_04630; phage(gi169257314)     9.41e-173           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPGADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1239091..1239351                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; AV48_27500; phage(gi169257315)     2.43e-58            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSG
1239366..1241726                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; AV48_27505; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916VLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETMDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAIEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKN
1241722..1242585                   PHAGE_Phage_Gifsy_2_NC_010393: pseudogene; bacteriophage tail fiber C-terminus (Host specificity); Lambda gpJ homolog; AV48_27510; phage(gi169257318)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MDLTEDNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGTGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
1242590..1242934                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AV48_04605; phage(gi169257321)     3.07e-68            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916IYDTTTGNQVYISELGPLPENVTSVSPDGEYQKWDGKAWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGLATDDEKAQLDEWKKYRVLVNRVDTLNPDWPEKPS
complement(1243136..1243858)       guanine nucleotide exchange factor SopE; AV48_04600                                  N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKNDVFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIQNTP
1244071..1244309                   PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; AV48_04595; phage(gi169936026)         3.34e-14            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MERELIVERTSAGLAAAREQGQIGGRRPKLTTEQWAQPGASLGPEYRDSRRLFMMLAFRRCTENFRRVTCLCHSWENAA
complement(1244338..1245138)       hypothetical protein; AV48_04590                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MIINVGHVATEKFDTTGVSACNNQQSTSVDLSSCIINAASECTVFVRTIIKKSDSYDAMQIDRLKIDTQEKYDALNLQREHHKKFLQTIKANSFDRAMAERPENPISLSLIYSSIDSIKYNTGNCADMSLILGAIIAKYIPQRLTGIGFSKNNVFDARISTSLMYNSASGGNHVVVFLTFTDSKGISEYILDPWLDARIFKKEESYEIYKNNSSEYINENHCFEAYDKYTAIMNSAEYIDAITKTINLLYRVNLDEIQXTXPFKFI
1246011..1246047                   attR                                                                                 N/A                 CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA
complement(1246433..1246924)       PHAGE_Entero_HK022_NC_002166: integrase; AV48_04580; phage(gi9634144)                9.52e-43            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916IDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEMILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRTAAEYLPVWFPLAMDLALVTGQRREDIVNMKFSDIVDGRLHVTQIKTGMKIAFP
complement(1246996..1247490)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; AV48_04575; phage(gi169257272)     6.41e-16            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MEQDTTEHHPAPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVHNNYSASNQGEKEEVVQEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
1247680..1247910                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; AV48_04570; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1247964..1248497                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AV48_04565; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1248754..1248921)       lytic enzyme; AV48_04560                                                             N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1248986..1249174)       hypothetical protein; AV48_27515                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKYEQLSTTTT
1249229..1249720                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AV48_04555; phage(gi169257298)     1.78e-36            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MDGELKNLKCNICQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGRFWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWSDKLERDKGWSADQLNEAQDVVDEARILLVKAIQETADDDGE
1249707..1250274                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; AV48_27520; phage(gi169257185)     1.58e-26            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGIKQFMFVPRGANTAVPWDDTLASQSFPKQQRPRNVSWFIPANWLAVHNRFFFVGLQAGGADRLPFPRYRWRGRWFFPGIQTYHHLYVCGDDTGREFAWSGNHRCEMAAFFAARGPTHDRHSFSLPGRSPSVVLALSTLRRLVPVRDGKHGGVT
1250273..1251504                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AV48_27525; phage(gi169257320)     4.22e-117           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MGEVQTKAPLDSLALTGTPTAPMPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYVGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEYSDGVGLMVLLHLHIFAAIEIPPTLSGQNGRCSTPHIRHRIRIQVRRHGRLMLLRQVTLCRGNRLINLLTRYWLRIRPALSLTCEAGQSKVNPPVGELYFLRRWTATNRTRTPRGRRISTGQKLPHPLITARNRPIPRAIILTSSAVISTHTGEIPITLHFSEVVRGHRPLATMRIQFISEDTSTPCISVHTDTSLLWSQTVMRKCC
complement(1252422..1252622)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; AV48_27530; phage(gi169257211)     1.14e-41            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MKHVKSVFLAMVLILPSSLYSALTIAADSQDHKKEETIKPIPQKWCTLWPAGIPFPEDWFKMCRGY
complement(1252813..1252929)       PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; AV48_04520; phage(gi966201445)     2.93e-06            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MWLAYKNEVKLIDITNTPDNVNWPVPPGGRASHDLKST
1253192..1253317                   arsenic transporter; AV48_10680                                                      N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
1253446..1253699                   hypothetical protein; AV48_27535                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MVLTLYEGLIEHQIYPGLFNTAYYEGNNMFSLIKSRKVLFITTLLLPSQRSLWGAGTVVALKNVQRFVPWRQVAPLVFSFAFAA
1253885..1254125                   Hin recombinase; AV48_10675                                                          N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916LLSIWKVIWLIASSASCGHCFSTQCATTVPLHWWPAKTDAGAMGAGRVPYGRSTATAGSDYLCGAVDAVQKIPCVRVA
complement(1254452..1255066)       disulfide bond formation protein B; AV48_10670                                       N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MKTHHHPTTLVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRAVLRL
complement(1255076..1255234)       hypothetical protein; AV48_10665                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
complement(1255367..1256281)       protein PagO; AV48_10660                                                             N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNIPVTSRCRDNSSQK
1256899..1257099                   hypothetical protein; AV48_27540                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSG
1257489..1257501                   attR                                                                                 N/A                 TTTCCGAAATTTT
complement(1257531..1257943)       integrase; AV48_10650                                                                N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MKIALPLSLTPPSMGLRLSTVIDRCRLVSRSEYLISAGIRKNRPNGSIHPDSLTKKFVAARKFTGINLVITHRHFTRSAAYPDDYIKMLTGKGLLRNSWDILPRTPRNSISMNAIIKLTCSAFAVKEMLNWIWIYAA

#### region 3 ####
1466674..1466686                   attL                                                                                 N/A                 CTTTTTTGAATTA
1467011..1468384                   PHAGE_Entero_CAjan_NC_028776: helicase-like protein; AV48_09465; phage(gi971742387)     3.74e-06            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQPASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPSLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
complement(1468428..1469363)       tRNA 2-thiocytidine(32) synthetase TtcA; AV48_09460                                  N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MQEIQKNTKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIVRFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVDGGDLAFDREEIPLQPAGWQPEEDDTALEALRLDVIEVK
complement(1469415..1469699)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AV48_09455; phage(gi18249865)     2.93e-32            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916FMPRMSKGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
complement(1469680..1470297)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; AV48_09450; phage(gi169257272)     1.84e-20            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MSDNKTEYSYYIKVKNESARKRLGFPFAFWWKTESSEAAATARLAVSMLDAGFEPTDFAKPVRVNSPAVNELPPEGSFDTTFCQKYELGGEDGKTFMLIPGTPATDAHDEKTEECADDAGTEESGTDTSDNDECQDCEVSVATLPFPQRVLHIFTYAATDKKYLHHATRAQRRHITVLEMEQENSYIQNLLMVLRKSEQVHAQDE
complement(1470325..1470642)       hypothetical protein; AV48_09445                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MKNVPESVIAELRQLSGKIRTLCIENNMPCVVSYARDCDDESVSRTLVAYTDSETGAYDRSITAAIMLLKMNEAPPENFISLLKLMECKELVTNAFCSMKNESLH
complement(1470727..1470948)       PHAGE_Shigel_Stx_NC_029120: Kil protein; AV48_09440; phage(gi985761255)              1.16e-40            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MIAHHFGTDEIPRQCITPGDYVIHDGRTYIASANNIKKRRLYIRDLTTQRCITDCMVKVWLNRNGLPAKAESW
1471046..1471351                   hypothetical protein; AV48_27675                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916ILIQGVLTVPRALSRIHRITKFTLKRADIRKDEKLMPPSTTHSIIVAVATTTGGALPLFGFTDKTDSENIRNAPSCCARLYLTTSGLRWSRLYPYSENLC
1471386..1471907                   hypothetical protein; AV48_09430                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MSETALVIVKFLIGKSVGQFMLTVALFFLIIIFIPRDITELIEARSDLPYAVQIFSFAVAYLIVLILKVTGYFFVSALPLCQRRGRAKRMLKTLNSLSTEQLFLLEPFLKTHSPTFRASWDNPDADALVKAGIVRPAGSCIDGVSVMFKIEPEYESLMLSTWNPCTKRFDISR
complement(1472015..1472170)       PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; AV48_27680; phage(gi472340166)     1.63e-11            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MQKIHLGNNESLVCGVFPNQDGTFTAMTYTRSRTFKTETGARRWLERNSGE
complement(1472182..1472368)       hypothetical protein; AV48_27685                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916LVLVPPPGVKGRGKDGKESDSVFDGLQRQLRSSPSIARQWMGYVFGSMRATGTVLSGVA
complement(1472555..1473022)       PHAGE_Pseudo_F116_NC_006552: transcriptional regulator; AV48_09410; phage(gi56692918)     1.50e-10            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MRKKREEIAPPEATQRLRAIWDAKKRDLKLTQEIAADLMGFETQSTVSHYLNGKAPLNTDAALKFSVLLRVKPEELRPDLADLMNYVRSSGTYDDNFEGGGWRMVSRQQADLLNLFDILPESEKEKLIDRLKGQNELXKEAFQNMLAAQKRLKNQ
1473126..1473311                   PHAGE_Escher_HK639_NC_016158: cro; AV48_27690; phage(gi356870651)                    2.47e-05            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MTLDEYLKKNRVRQSCLATLAGCSQSMISLVTTGRSQLSPEKVLRIAEATNFEVTPHELRPD
1473295..1473624                   PHAGE_Shigel_Stx_NC_029120: LygF; AV48_09400; phage(gi985761265)                     4.59e-22            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MNSGLITLTELRRMTGLTIYSTRHYLDKAERCGDVYQAGRRGGIFPSEEAYRAWKKQAKVDADLIWKLPDGEVRRYDRHHNVICRECRKSEYMQRVLAFYRGNFQEVLL
complement(1473786..1474340)       hypothetical protein; AV48_09395                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MNKINVLGVIIKHYKTMSDQRGTMLMSDITVHFIVPLSLSFVLCWTYGIMKPAIASVFVNFGAITTALLMSAVIMIYEQKQKTITKISDIIEGNKSRDKLISLNTNKTIYEQLCHNVAYAILTSIVLVIFSVIIYFLPDNAVDLMKWYFRAPAYIVSFLAYTSFFITVITFLMVIKRFSTILDN
complement(1474337..1475269)       hypothetical protein; AV48_09390                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MHSVNFYSFRVLTHKGSRASKKLNDLGLSNKKTAYELFVDYFTLYKNTPIEFGVSKTKISLEQHTKLHFDNTKKIIYGYIKVGKYGESSEIKDVKLKKVHYRTTAYDVTLKERYILIYLPDNLEEGIIAFHSCDNISARGVLSDSITEYLKKQFQLEARINPLHHKKIPQYILNSELKQIKAQGYKAPEDIADSFGKNKTNIKTDLIIKANDGIFGSFRDLRNKNIGNIIEIIEDKCDAIKVSLQLGSRTVVFNYDTILKKGISAELDDNDLKIDPLTGIPDLTALHDTIKNLSNDILEELHCGNKGVII
1475639..1475851                   PHAGE_Entero_933W_NC_000924: protein MokW; AV48_09385; phage(gi9632542)              2.64e-39            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MLCTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
1476375..1476974                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AV48_09375; phage(gi169257286)     4.32e-69            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MAHLQLVKQTSSGLLLPATPESEDFLRSVKIGAWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPIGGAILPQEQELITGFVDFLCESAAQGHSPALSDAAEQYLHKVAVNRTLDVALLKSFDAFREWVTIQAGFYTEHYYPDGSRGRRAKSIAFANMDETEFQQVYKAVLNVLWNWILFRKFSSPEEVENVAAQLLEFA
1476974..1477264                   PHAGE_Erwini_phiEt88_NC_015295: hypothetical protein; AV48_09370; phage(gi327198620)     8.68e-38            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MADLRKAARGLMCTVRIPGHCNHNPETSVLAHYRLAGTCGTATKPNDMQAAIACSSCHDIVDGRVKIDDFTKTEIRLMHAEGVFRTQEIWREKGIL
1477261..1477797                   PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; AV48_09365; phage(gi100055)       6.94e-07            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MIYPTNTGKSGEHLRLSTLESVWIQGKLRMWGRWSYIGGGKTGNMFNQLLASKKLTKTAINDALRRMKKAGLEKPELEVFLREMINGKQKSWLAHCTDTEALIIDRVVGEVLTDHPGLLGILNQRYVGRGMSKRRMAELLNEQYPEWALITCRRRVEQWLSIAEFILYSPMRKAFDYA
1478822..1478834                   attR                                                                                 N/A                 CTTTTTTGAATTA
1479168..1479179                   attL                                                                                 N/A                 CAATTTTTTTAC
1479968..1480363                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AV48_09360; phage(gi100118)       1.12e-62            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MLGIFRKKTRKAIVEVKKMENRDAVEATVWGAYSIAYADGTCDAKEIAVLEKTIAALPAFAPFSGEIAQMSANIRARYEASPRSANAQALRELADVAGTAEAVDVLCLYWPRSCPALLTTTVNRWMRCVQW
1480285..1480473                   PHAGE_Entero_phiP27_NC_003356: putative holin; AV48_09355; phage(gi18249892)         2.43e-16            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MPVLASFLSRLADYNGKPLDALCAVVMSVLSVKFLTFIHDQDISSLTGVFSRMRGGGSGHGK
1480463..1480744                   PHAGE_Entero_phiP27_NC_003356: putative holin; AV48_09350; phage(gi18249893)         2.47e-24            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MESNLTGTLNAGLCLVTVLALFLYRRNGARYKPGIAWLSYLLMLGYALVPFRFLAGHYPSSSWPVVLMNALFCGLVLWARGNVSKILSLLRLR
1480741..1481286                   PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; AV48_09345; phage(gi422935930)         1.04e-86            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MKPKDEIFDEILGKEGGYVNHPDDKGGPTKWGITEKVARAHGYRGDMRNLTRGQALEILETDYWYGPRFDRVAKASPDVAAELCDTGVNMGPSVAAKMLQRWLNVFNQGGRLYPDMDTDGRIGPRTLNALRVYLEKRGKDGERVLLVALNCTQGERYLELAEKREADESFVYGWMKERVLI
complement(1481828..1482031)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; AV48_09335; phage(gi169257268)     3.45e-24            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916KRAGIRRRNPYHTRHAFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
1481987..1482139                   multidrug transporter; AV48_09330                                                    N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MSRMVRITATNASTFLWQDTQWFKSVFILSSVLLKISSRPEKYWNEEMYD
1482132..1482470                   PHAGE_Acinet_ZZ1_NC_018087: putative quaternary ammonium compound-resistance protein qacE; AV48_09325; phage(gi392973036)     3.10e-13            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MTKEAVIFLFIAIVVEVIATISLKLSDSFTRLVPSLVTIIGYCIAFWCLTIPMRTIPAGIIYAIWSGVGIVLIGLIGWLFLGQKLDMPAIIGMLLIICGVIVINLFSKSVSH
1492466..1492477                   attR                                                                                 N/A                 CAATTTTTTTAC

#### region 4 ####
2498870..2499811                   PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; AV48_02860; phage(gi966197797)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MDSLNDDKINRQSSDLEVESEEKQSGKEIEVDEDRLPSRAMAIHEHIRQDGEKEMERDAMALLWSAIAAGLSMGASLLAKGIFHVQLEGVPGGFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQNPTLSNVGLLMRLWGVVLLGNLIGTGVAAWAFEYMPIFDEETRDAFVKIGMEVMKNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTLPWSDFLWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKEEARLRGERLERERKKAEKQR
2499887..2499961                   tRNA                                                                                 N/A                 GTCCCCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAGTTGCAGGTTCGATTCCTGCAGGGGACACCA
complement(2500109..2500733)       PROPHAGE_Shewan_MR-1: ISSod4, transposase; AV48_02850; phage(gi24373869)             1.28e-07            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MSHPFDFDKALKALQVRPGINGQRWHLNAINQVFNRVYPVCTFPSGSGCGKPKWFRQKAIKAPTGSFELATPRNRNGTFEPLVKKLQTPCTTRSSAISFDCLRWRVIRTSAGRVKIFMPSAFQPPPSVQYRSYPTKTVATAPAGEGLSRRLAGRYSLKPGWPLSEQGGLYRSGTESGRQKRSSGPISVGKRCLLVKT
complement(2500747..2500937)       hypothetical protein; AV48_28140                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916LIDVIDQLVLLIAKRLGIKTGHVKLCIVLQGFAFFFRERYLKGWKCWGEGERKFCIILVTNAA
2501054..2501443                   PHAGE_Entero_UAB_Phi20_NC_031019: RNA polymerase sigma factor; AV48_02845; phage(gi100049)     2.72e-73            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MLKLFAKYTSIGVLNMLIHWRVFAFCMYGMHTHQALTNFSDFVIAVSFSFYANARFTFNASTTAIRYMMYMGFMGALSAVVGWMADQCSLPPLVTLITFSAISLVCGFIYSRFFIFRDKNENLSCRPSF
2501412..2501666                   PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; AV48_02840; phage(gi100002)     1.61e-33            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MKISLVVLVFNEEDTIPIFYRTVHEFNELEKYKVEIIFINDGSKDVTESIIKIIAVSDPLVIPFSFTRNFGNDARCTTILLIFF
2501684..2503606                   PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; AV48_02835; phage(gi100015)       0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MEHLKYRPDIDGLRAIAVLSVVIFHYFPSLLPGGFVGVDIFFVISGYLITSIILKSASNKSFSYLDFYKRRVLRIFPALSIVLVSCLIVGWVYLFQDDYKLLGKHVFSGSFFISNFTLWSESGYFDSKSYLKPLLHLWSLGIEEQFYIIWPVVILLCFRSKNHNRNIVLSCATIFIISYAISIFTMASDGGANYYSPASRFWELMAGAIISTLRFIGINTSLSKLMSLLGIILIALSITMIDEKMSFPGYIAIIPVLGASLIIASNGNDLVVSKLLSVRPVVFFGLISYPLYLWHWPIYSFYRSIFAGSPDYHELILLLLSSFFLAILTYYLIEKPLRNARNKYITAILLALSVFGTGLIGAFIFHINGVKDREINKSAGEYASVTDVYNYYKYGELLRGGICHSVQLTAAISNGCIKNGKHNIFIIGDSYAAALFNGLSHYIDNKGSDYIISQMTDGNAPPLFVDGKDDLQRSVITLNNNRINEIKRVQPEVVLLTWSVRGTNGVHDKKLAIDTLSLTIKKIKEASPDSRIIFIGPVPEWNANLVKIISNYLSEFKKTPPLYMTYGLNSEISEWDSYFSNNVPKMGIEYISAYKALCNESGCLTRVGNGPDFITAVDWGHLTKPGSDFLFNKIGNKIIK
complement(2503777..2504223)       PROPHAGE_Escher_CFT073: transposase; AV48_02825; phage(gi26246249)                   1.91e-49            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MDEKKLTALAAELAKGLKTEADLSQFSHMLTTLTVETALNAELADHLGHEKNAPKTSSNSHNGYSLKTVLYDGGEIVLNMLRDRENTFELQLIKEHQTRITRWTVRFIPLCQRHDMTTREIIATFKEMYNADVSPMLILKITAAVKELV
complement(2504596..2504739)       PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; AV48_28145; phage(gi100014)       8.17e-16            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MDGWGSYVSNILMQDCAGSGDLWYTYGKAFTYISVIDTKTLTLTNCL
complement(2504755..2504922)       PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; AV48_28150; phage(gi100014)       9.14e-15            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120916MYFLWDCFNLWADIGNEKDRPGNYSLSEYPVHQLPTTNYQLPTNHLVDGLVAIGS
