gi|00000000|ref|CP007355.2|  Salmonella enterica subsp. enterica serovar Enteritidis str. 4685845, gc%: 51.74%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1011982..1013184)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; AV76_05285; phage(gi100242)     1.40e-49            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS
1013330..1013344                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1013379..1013789)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; AV76_25840; phage(gi169257271)     1.46e-44            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
1013810..1014439                   hypothetical protein; AV76_05305                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MYGVQGTPDCYRIELKNVYGVQENLISYRQASLGAWVAIAGGGDPYEVAYAIYKAVPDISVLTNDVVNPSGAAVDKKTIPIIVYPDTYHVPFVVPSSQNVTLLITWNTASTSYIDPTGIEKAVQQSIADYINGIATGEPINIFLIRDIFLNQVKGLVSSNLVSMIDIQVGINGKIVPPATDSSLVYGDTYAYFSTSSSQIQVKQYGSSS
1014423..1015049                   hypothetical protein; AV76_05310                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MAALLESIIPAYPYTQYNDDPDIVAFFDAYNKLAQGYLDYFNNLNLPCWTSPAITGELLDWIAAGIYGESRPLLQISEDAIARGAYNTIEYNNVAYAKLRNYVPGSASYVPDDYFKRILTWNFYKGDGSHFCINWFKRRLARFIHGANGIDPPVQSTFDISVMPDKGIFFVSIPDYGDGVGHFLKDAIDQSLVKLPFIYTYSVTVVEQ
1015046..1016755                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AV76_05315; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MIIGFGNNVVSSLAADITASQTTIQVMPGVGAMFANLLTSDYANSSNPLKTYAKITLTDAKETVFEVCHLTAVNNDMLTVIRGQEGTTAKGWSLNDVIANFATRGSENQFVQIEELQSGHYVAGVAGGTENNLTLELPATYFVNGGVDWTLRTPLVVIPALNNTGASTLQLTMGGRVLGIFPLYKGNKAELSANDIIKDIPVLCVLDNTKTYFSVLNPLEIYLGSRYLQKDQNLSDVPDKAKGRSSLEVYSKTESDENYMAKSQCGADIPNKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQVTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1016755..1017336                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AV76_05320; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
1017814..1018782                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; AV76_05330; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
1019050..1019298                   PHAGE_Stx2_c_1717_NC_011357: transposase; AV76_05340; phage(gi209447153)             2.73e-30            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MEIDNNICENALRCVALGRRNYLFFGSDRSGEAAAIIYSLLGTCKLNGVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(1019430..1020056)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; AV76_05345; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(1020240..1020419)       hypothetical protein; AV76_05350                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MIVNLYQDNYSGYRQHGGSGVGGSNPLVPTKIPLKNQPVRAVFFMAQFPTGKLWGETGE
complement(1020416..1021102)       virulence protein; AV76_05355                                                        N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(1021373..1021564)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; AV76_05360; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
1021870..1021884                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 2 ####
1226351..1226362                   attL                                                                                 N/A                 CTTATGATCAAT
1226388..1226424                   attL                                                                                 N/A                 CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA
complement(1226469..1227548)       PHAGE_Entero_HK022_NC_002166: integrase; AV76_25910; phage(gi9634144)                2.82e-93            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MSRKKYDANLPRNLTYRKASKSFFWRNPLTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRGNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
complement(1227523..1227801)       excisionase; AV76_06630                                                              N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MTMSFVRLETWGELNYPDDPPPLTTLRRWARNGNIYPTPVLHGRTYRVDPDAFYIKPNKVGLVLEQHHPNGRTGKPSALLEKLISESKKVRC
1228215..1230194                   hypothetical protein; AV76_06635                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MRLKLIVKSFALAGLLSSTALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAHKGFIAGLPEEVIKGEQGNVIWNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTDGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKAGMDLYFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPDASGQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLRGAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLPDSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKADFDQGNYRWVAQVVSKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHINGEKAGNARAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATITLNRDTLNKIILKEETLKQAQDKGEVNVTGNAAKLDEMLGYMDKFEFWFNIVTP
complement(1230212..1230403)       hypothetical protein; AV76_06640                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MNHATTSYCHLMKKAVHNRIRTDWYQGHVLQQQIHKMKQDIKNEGKIEYKKRTELSEVTSLQH
1230826..1231131                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; AV76_06645; phage(gi423262436)     1.24e-10            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MMIINSLLYIHVENEDALKMLKFVIYGDTVKNLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDTLINELTIRAGYHE
1231195..1231794                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AV76_06650; phage(gi169257286)     2.14e-70            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWMPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTEHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
1231791..1232018                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; AV76_06655; phage(gi169257288)                  3.59e-12            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MKMTWFQHPVCTTEEADELVAGYRRRGVKVERYGEAEVLELESNNTPQRWTVEELKEIRIAALADLRALKKLEAA
1232148..1232837                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; AV76_06665; phage(gi169257244)     5.53e-112           SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MNTQYLEYVRQQLIVATADLSGATKGQLQAWLENAQLYTKNYPRKKQRIRDEVTGKMITLNNPPIAGKQSLAKGSAIPLVQPVEYSTSSWRRALLSLEEHNKAWLLWNYSENTCWEYQVTVTRWAWEKFSQQLEGKRVAKKTLARLRQLIWLAAQDVKAELARRETYEYQTLAELMGVAKSTWTETYMSHWLVMRNSFKRLDSDALISVTRSRSQQKATNLDISLAKPN
1232934..1233458                   hypothetical protein; AV76_06670                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MFYRDLFQVFGPDPLYKEEEGIAILREQYGIEAPEQIFKQIYCGLSNNSEFQTLYGHLNLKSLKWDLVRLKTAEFTKFGRNATYPDYMLEISEDFNACGSKFCIDAREEVANHWLKFGTWAEPPMFIERSLIIPGESGLHLMEGHTRLGTLLGAIKYKFVQLADTHELYIASQK
complement(1233832..1234281)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AV76_06675; phage(gi169257293)     1.10e-105           SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENSLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1234642..1235328)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; AV76_06680; phage(gi169257294)     6.16e-169           SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELRDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1235598..1235933                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; AV76_06685; phage(gi169257295)     2.16e-75            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MKMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1235920..1236369                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; AV76_06690; phage(gi169257296)     3.42e-106           SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1236387..1236866                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; AV76_25915; phage(gi169257297)     6.25e-115           SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
1237074..1237385                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AV76_06705; phage(gi169257298)     2.12e-70            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088VDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSV
1237465..1237644                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; AV76_06715; phage(gi169257312)     1.66e-35            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1237761..1238294)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; AV76_06720; phage(gi169257313)     6.02e-125           SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1238384..1239079                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; AV76_06725; phage(gi169257314)     9.41e-173           SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPGADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1239089..1239370                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; AV76_25920; phage(gi169257315)     3.30e-58            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGTVCRAC
1239349..1242583                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; AV76_06735; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088NGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETMDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAIEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKNPDGGRQQTATIFEGVAGRRMERHVGRQNRADQRRQILCGRTWTEHGRHAREDKPVPGGGGSHCLYPGKRKRDARIRHAGRPDNHEGVPEIPERADHYQWRESSGIFPDAGWKADCEKCGYQRPYQRCIWLVYGRNQCHLRVFWRDRSKRVCRYLRLKSHAGREHQGDERRTQHLNTVYRQRHLSDRENHHGDGLARWHRCHHRHDKYRPGENGGGYAVYRRDSGHVSDRRLFGLHHFTCRGYQRLSEGPWAVHHVCFRLAAGDGFPVGEQLHKLA
1242705..1242932                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AV76_06750; phage(gi169257321)     5.51e-41            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGLATDDEKAQLDEWKKYRVLVNRVDTLNPDWPEKPS
complement(1243134..1243856)       type III secretion protein SopE2; AV76_06755                                         N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKNDVFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIQNTP
1244066..1244307                   PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; AV76_06760; phage(gi169936026)         7.96e-15            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088EMERELIVERTSAGLAAAREQGQIGGRRPKLTTEQWAQPGASLGPEYRDSRRLFMMLAFRRCTENFRRVTCLCHSWENAA
complement(1244336..1245136)       hypothetical protein; AV76_06765                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MIINVGHVATEKFDTTGVSACNNQQSTSVDLSSCIINAASECTVFVRTIIKKSDSYDAMQIDRLKIDTQEKYDALNLQREHHKKFLQTIKANSFDRAMAERPENPISLSLIYSSIDSIKYNTGNCADMSLILGAIIAKYIPQRLTGIGFSKNNVFDARISTSLMYNSASGGNHVVVFLTFTDSKGISEYILDPWLDARIFKKEESYEIYKNNSSEYINENHCFEAYDKYTAIMNSAEYIDAITKTINLLYRVNLDEIQLTNPFKFI
1246009..1246045                   attR                                                                                 N/A                 CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA
complement(1246081..1246350)       PHAGE_Entero_HK022_NC_002166: integrase; AV76_06770; phage(gi9634144)                3.53e-15            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MISAGIRKNSPTGNIHPDGLTKKFVKARKISDVKCSDNPPTFHEIRSLLGRLYKDERGEEFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(1246365..1246934)       PHAGE_Entero_HK022_NC_002166: integrase; AV76_06775; phage(gi9634144)                1.88e-47            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEMILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRTAAEYLPVWFPLAMDLALVTGQRREDIVNMKFSDIVDGRLHVTQIKTGMKIAFPLSLTLQAPGLRPGRLSIAADW
complement(1246994..1247647)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; AV76_06780; phage(gi169257272)     1.20e-15            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKPQPTGELADEPATPEAVEQDTTEHHPAPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVHNNYSASNQGEKEEVVQEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
1247678..1247908                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; AV76_06785; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1247962..1248495                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AV76_06790; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1248752..1248919)       lytic enzyme; AV76_06795                                                             N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1248984..1249172)       hypothetical protein; AV76_25925                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKYEQLSTTTT
1249227..1249718                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AV76_06800; phage(gi169257298)     1.78e-36            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MDGELKNLKCNICQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGRFWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWSDKLERDKGWSADQLNEAQDVVDEARILLVKAIQETADDDGE
1249705..1249884                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; AV76_06805; phage(gi169257185)     6.07e-29            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGIKQFMFVPRGANTAVPWDDTLASQSFPK
1249904..1250278                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; AV76_06810; phage(gi169257299)     3.62e-69            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MFRDGSFLQIGWPSITVFSSSDYKRVALTDYDRFPEDIDGEGDGFSLASKRTTTFMSAGMTPAESSPGREITDVKWRRSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGDWFQSAMENMVGYG
1250271..1250867                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AV76_06815; phage(gi169257320)     5.26e-120           SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MGEVQTKAPLDSLALTGTPTAPMPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYVGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEY
1251188..1251874                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AV76_25930; phage(gi16765208)     1.98e-90            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MDGNKSHSYTARAQDIDLGTKTTSSFDYGTKSTNTTGNHTNQFGGYINSYWGDSNHTSFQLGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVVADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPDSVARQIVLI
1252087..1252323                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AV76_25935; phage(gi16765208)     9.15e-47            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MNDEAAEAAARLREAEGTKNRLLQITSEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1252420..1252620)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; AV76_25940; phage(gi169257211)     1.14e-41            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MKHVKSVFLAMVLILPSSLYSALTIAADSQDHKKEETIKPIPQKWCTLWPAGIPFPEDWFKMCRGY
1257466..1257477                   attR                                                                                 N/A                 CTTATGATCAAT

#### region 3 ####
1466672..1466684                   attL                                                                                 N/A                 CTTTTTTGAATTA
1467009..1468382                   PHAGE_Entero_CAjan_NC_028776: helicase-like protein; AV76_08075; phage(gi971742387)     3.74e-06            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQPASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPSLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
complement(1468426..1469361)       tRNA 2-thiocytidine(32) synthetase TtcA; AV76_08080                                  N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MQEIQKNTKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIVRFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVDGGDLAFDREEIPLQPAGWQPEEDDTALEALRLDVIEVK
complement(1469413..1469697)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AV76_26050; phage(gi18249865)     2.93e-32            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088FMPRMSKGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
complement(1469678..1470295)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; AV76_08095; phage(gi985761253)     1.22e-47            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MSDNKTEYSYYIKVKNESARKRLGFPFAFWWKTESSEAAATARLAVSMLDAGFEPTDFAKPVRVNSPAVNELPPEGSFDTTFCQKYELGGEDGKTFMLIPGTPATDAHDEKTEECADDAGTEESGTDTSDNDECQDCEVSVATLPFPQRVLHIFTYAATDKKYLHHATRAQRRHITVLEMEQENSYIQNLLMVLRKSEQVHAQDE
complement(1470323..1470640)       hypothetical protein; AV76_08100                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MKNVPESVIAELRQLSGKIRTLCIENNMPCVVSYARDCDDESVSRTLVAYTDSETGAYDRSITAAIMLLKMNEAPPENFISLLKLMECKELVTNAFCSMKNESLH
complement(1470725..1470946)       PHAGE_Shigel_Stx_NC_029120: Kil protein; AV76_08105; phage(gi985761255)              1.16e-40            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MIAHHFGTDEIPRQCITPGDYVIHDGRTYIASANNIKKRRLYIRDLTTQRCITDCMVKVWLNRNGLPAKAESW
1471384..1471905                   hypothetical protein; AV76_08115                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MSETALVIVKFLIGKSVGQFMLTVALFFLIIIFIPRDITELIEARSDLPYAVQIFSFAVAYLIVLILKVTGYFFVSALPLCQRRGRAKRMLKTLNSLSTEQLFLLEPFLKTHSPTFRASWDNPDADALVKAGIVRPAGSCIDGVSVMFKIEPEYESLMLSTWNPCTKRFDISR
complement(1472013..1472177)       PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; AV76_26055; phage(gi472340166)     7.43e-11            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MDKLQKIHLGNNESLVCGVFPNQDGTFTAMTYTRSRTFKTETGARRWLERNSGE
complement(1472553..1473020)       PHAGE_Pseudo_F116_NC_006552: transcriptional regulator; AV76_08135; phage(gi56692918)     1.71e-10            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MRKKREEIAPPEATQRLRAIWDAKKRDLKLTQEIAADLMGFETQSTVSHYLNGKAPLNTDAALKFSVLLRVKPEELRPDLADLMNYVRSSGTYDDNFEGGGWRMVSRQQADLLNLFDILPESEKEKLIDRLKGQNELYKEAFQNMLAAQKRLKNQ
1473293..1473622                   PHAGE_Shigel_Stx_NC_029120: LygF; AV76_08145; phage(gi985761265)                     4.59e-22            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MNSGLITLTELRRMTGLTIYSTRHYLDKAERCGDVYQAGRRGGIFPSEEAYRAWKKQAKVDADLIWKLPDGEVRRYDRHHNVICRECRKSEYMQRVLAFYRGNFQEVLL
complement(1473784..1474338)       hypothetical protein; AV76_08150                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MNKINVLGVIIKHYKTMSDQRGTMLMSDITVHFIVPLSLSFVLCWTYGIMKPAIASVFVNFGAITTALLMSAVIMIYEQKQKTITKISDIIEGNKSRDKLISLNTNKTIYEQLCHNVAYAILTSIVLVIFSVIIYFLPDNAVDLMKWYFRAPAYIVSFLAYTSFFITVITFLMVIKRFSTILDN
complement(1474335..1475267)       hypothetical protein; AV76_08155                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MHSVNFYSFRVLTHKGSRASKKLNDLGLSNKKTAYELFVDYFTLYKNTPIEFGVSKTKISLEQHTKLHFDNTKKIIYGYIKVGKYGESSEIKDVKLKKVHYRTTAYDVTLKERYILIYLPDNLEEGIIAFHSCDNISARGVLSDSITEYLKKQFQLEARINPLHHKKIPQYILNSELKQIKAQGYKAPEDIADSFGKNKTNIKTDLIIKANDGIFGSFRDLRNKNIGNIIEIIEDKCDAIKVSLQLGSRTVVFNYDTILKKGISAELDDNDLKIDPLTGIPDLTALHDTIKNLSNDILEELHCGNKGVII
complement(1475448..1475592)       hypothetical protein; AV76_26060                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MLTGAFLYLPFGVHAGRPQAPATILLNSPFPANRFYPQRKFYQYPLA
1475637..1475849                   PHAGE_Entero_933W_NC_000924: protein MokW; AV76_08160; phage(gi9632542)              2.64e-39            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MLCTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
1476373..1476972                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; AV76_08170; phage(gi435439315)     1.47e-71            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MAHLQLVKQTSSGLLLPATPESEDFLRSVKIGAWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPIGGAILPQEQELITGFVDFLCESAAQGHSPALSDAAEQYLHKVAVNRTLDVALLKSFDAFREWVTIQAGFYTEHYYPDGSRGRRAKSIAFANMDETEFQQVYKAVLNVLWNWILFRKFSSPEEVENVAAQLLEFA
1476972..1477262                   PHAGE_Shigel_Stx_NC_029120: hypothetical protein; AV76_08175; phage(gi985761275)     1.41e-30            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MADLRKAARGLMCTVRIPGHCNHNPETSVLAHYRLAGTCGTATKPNDMQAAIACSSCHDIVDGRVKIDDFTKTEIRLMHAEGVFRTQEIWREKGIL
1477259..1477795                   PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; AV76_08180; phage(gi100055)       6.94e-07            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MIYPTNTGKSGEHLRLSTLESVWIQGKLRMWGRWSYIGGGKTGNMFNQLLASKKLTKTAINDALRRMKKAGLEKPELEVFLREMINGKQKSWLAHCTDTEALIIDRVVGEVLTDHPGLLGILNQRYVGRGMSKRRMAELLNEQYPEWALITCRRRVEQWLSIAEFILYSPMRKAFDYA
1478820..1478832                   attR                                                                                 N/A                 CTTTTTTGAATTA
1479166..1479177                   attL                                                                                 N/A                 CAATTTTTTTAC
1479966..1480361                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AV76_08185; phage(gi100118)       1.12e-62            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MLGIFRKKTRKAIVEVKKMENRDAVEATVWGAYSIAYADGTCDAKEIAVLEKTIAALPAFAPFSGEIAQMSANIRARYEASPRSANAQALRELADVAGTAEAVDVLCLYWPRSCPALLTTTVNRWMRCVQW
1480461..1480742                   PHAGE_Entero_phiP27_NC_003356: putative holin; AV76_08195; phage(gi18249893)         2.47e-24            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MESNLTGTLNAGLCLVTVLALFLYRRNGARYKPGIAWLSYLLMLGYALVPFRFLAGHYPSSSWPVVLMNALFCGLVLWARGNVSKILSLLRLR
1480739..1481284                   PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; AV76_08200; phage(gi422935930)         1.04e-86            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MKPKDEIFDEILGKEGGYVNHPDDKGGPTKWGITEKVARAHGYRGDMRNLTRGQALEILETDYWYGPRFDRVAKASPDVAAELCDTGVNMGPSVAAKMLQRWLNVFNQGGRLYPDMDTDGRIGPRTLNALRVYLEKRGKDGERVLLVALNCTQGERYLELAEKREADESFVYGWMKERVLI
complement(1481826..1481966)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AV76_08210; phage(gi18249865)     6.30e-16            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
1481985..1482137                   multidrug transporter; AV76_08215                                                    N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MSRMVRITATNASTFLWQDTQWFKSVFILSSVLLKISSRPEKYWNEEMYD
1482130..1482468                   PHAGE_Acinet_ZZ1_NC_018087: putative quaternary ammonium compound-resistance protein qacE; AV76_08220; phage(gi392973036)     3.10e-13            SalmonellaentericasubspentericaserovarEnteritidisstrEC20100088MTKEAVIFLFIAIVVEVIATISLKLSDSFTRLVPSLVTIIGYCIAFWCLTIPMRTIPAGIIYAIWSGVGIVLIGLIGWLFLGQKLDMPAIIGMLLIICGVIVINLFSKSVSH
1492464..1492475                   attR                                                                                 N/A                 CAATTTTTTTAC
