gi|00000000|ref|CP007364.2|  Salmonella enterica subsp. enterica serovar Enteritidis str. 4685846, gc%: 51.72%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1011982..1013184)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; AV44_05240; phage(gi100242)     1.40e-49            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS
1013330..1013344                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1013379..1013789)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; AV44_25375; phage(gi169257271)     1.46e-44            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
1013810..1014439                   hypothetical protein; AV44_05260                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MYGVQGTPDCYRIELKNVYGVQENLISYRQASLGAWVAIAGGGDPYEVAYAIYKAVPDISVLTNDVVNPSGAAVDKKTIPIIVYPDTYHVPFVVPSSQNVTLLITWNTASTSYIDPTGIEKAVQQSIADYINGIATGEPINIFLIRDIFLNQVKGLVSSNLVSMIDIQVGINGKIVPPATDSSLVYGDTYAYFSTSSSQIQVKQYGSSS
1014423..1015049                   hypothetical protein; AV44_05265                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MAALLESIIPAYPYTQYNDDPDIVAFFDAYNKLAQGYLDYFNNLNLPCWTSPAITGELLDWIAAGIYGESRPLLQISEDAIARGAYNTIEYNNVAYAKLRNYVPGSASYVPDDYFKRILTWNFYKGDGSHFCINWFKRRLARFIHGANGIDPPVQSTFDISVMPDKGIFFVSIPDYGDGVGHFLKDAIDQSLVKLPFIYTYSVTVVEQ
1015046..1016755                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AV44_05270; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MIIGFGNNVVSSLAADITASQTTIQVMPGVGAMFANLLTSDYANSSNPLKTYAKITLTDAKETVFEVCHLTAVNNDMLTVIRGQEGTTAKGWSLNDVIANFATRGSENQFVQIEELQSGHYVAGVAGGTENNLTLELPATYFVNGGVDWTLRTPLVVIPALNNTGASTLQLTMGGRVLGIFPLYKGNKAELSANDIIKDIPVLCVLDNTKTYFSVLNPLEIYLGSRYLQKDQNLSDVPDKAKGRSSLEVYSKTESDENYMAKSQCGADIPNKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQVTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1016755..1017336                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AV44_05275; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
1017814..1018782                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; AV44_05285; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
1019050..1019298                   PHAGE_Stx2_c_1717_NC_011357: transposase; AV44_05295; phage(gi209447153)             2.73e-30            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MEIDNNICENALRCVALGRRNYLFFGSDRSGEAAAIIYSLLGTCKLNGVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(1019430..1020056)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; AV44_05300; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(1020240..1020419)       hypothetical protein; AV44_05305                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MIVNLYQDNYSGYRQHGGSGVGGSNPLVPTKIPLKNQPVRAVFFMAQFPTGKLWGETGE
complement(1020416..1021102)       virulence protein; AV44_05310                                                        N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(1021373..1021564)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; AV44_05315; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
1021870..1021884                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 2 ####
1226351..1226362                   attL                                                                                 N/A                 CTTATGATCAAT
1226388..1226424                   attL                                                                                 N/A                 CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA
complement(1226469..1227548)       PHAGE_Entero_HK022_NC_002166: integrase; AV44_25415; phage(gi9634144)                2.82e-93            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MSRKKYDANLPRNLTYRKASKSFFWRNPLTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRGNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
complement(1227523..1227801)       excisionase; AV44_06565                                                              N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MTMSFVRLETWGELNYPDDPPPLTTLRRWARNGNIYPTPVLHGRTYRVDPDAFYIKPNKVGLVLEQHHPNGRTGKPSALLEKLISESKKVRC
1228215..1230194                   hypothetical protein; AV44_06570                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MRLKLIVKSFALAGLLSSTALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAHKGFIAGLPEEVIKGEQGNVIWNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTDGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKAGMDLYFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPDASGQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLRGAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLPDSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKADFDQGNYRWVAQVVSKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHINGEKAGNARAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATITLNRDTLNKIILKEETLKQAQDKGEVNVTGNAAKLDEMLGYMDKFEFWFNIVTP
complement(1230212..1230403)       hypothetical protein; AV44_06575                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MNHATTSYCHLMKKAVHNRIRTDWYQGHVLQQQIHKMKQDIKNEGKIEYKKRTELSEVTSLQH
1230826..1231131                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; AV44_06580; phage(gi423262436)     1.24e-10            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MMIINSLLYIHVENEDALKMLKFVIYGDTVKNLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDTLINELTIRAGYHE
1231195..1231794                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AV44_06585; phage(gi169257286)     2.14e-70            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWMPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTEHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
1231791..1232018                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; AV44_06590; phage(gi169257288)                  3.59e-12            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MKMTWFQHPVCTTEEADELVAGYRRRGVKVERYGEAEVLELESNNTPQRWTVEELKEIRIAALADLRALKKLEAA
1232148..1232837                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; AV44_06600; phage(gi169257244)     5.53e-112           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MNTQYLEYVRQQLIVATADLSGATKGQLQAWLENAQLYTKNYPRKKQRIRDEVTGKMITLNNPPIAGKQSLAKGSAIPLVQPVEYSTSSWRRALLSLEEHNKAWLLWNYSENTCWEYQVTVTRWAWEKFSQQLEGKRVAKKTLARLRQLIWLAAQDVKAELARRETYEYQTLAELMGVAKSTWTETYMSHWLVMRNSFKRLDSDALISVTRSRSQQKATNLDISLAKPN
1232934..1233458                   hypothetical protein; AV44_06605                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MFYRDLFQVFGPDPLYKEEEGIAILREQYGIEAPEQIFKQIYCGLSNNSEFQTLYGHLNLKSLKWDLVRLKTAEFTKFGRNATYPDYMLEISEDFNACGSKFCIDAREEVANHWLKFGTWAEPPMFIERSLIIPGESGLHLMEGHTRLGTLLGAIKYKFVQLADTHELYIASQK
complement(1233832..1234281)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AV44_06610; phage(gi169257293)     1.10e-105           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENSLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1234642..1235328)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; AV44_06615; phage(gi169257294)     6.16e-169           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELRDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1235598..1235933                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; AV44_06620; phage(gi169257295)     2.16e-75            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MKMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1235920..1236369                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; AV44_06625; phage(gi169257296)     3.42e-106           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1236387..1236866                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; AV44_06630; phage(gi169257297)     6.25e-115           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
1237074..1237385                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AV44_06635; phage(gi169257298)     2.12e-70            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555VDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSV
1237465..1237644                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; AV44_06645; phage(gi169257312)     1.66e-35            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1237761..1238294)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; AV44_06650; phage(gi169257313)     6.02e-125           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1238384..1239079                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; AV44_06655; phage(gi169257314)     9.41e-173           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPGADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1239089..1239370                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; AV44_25420; phage(gi169257315)     3.30e-58            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGTVCRAC
1239349..1242583                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; AV44_06665; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555NGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETMDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAIEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKNPDGGRQQTATIFEGVAGRRMERHVGRQNRADQRRQILCGRTWTEHGRHAREDKPVPGGGGSHCLYPGKRKRDARIRHAGRPDNHEGVPEIPERADHYQWRESSGIFPDAGWKADCEKCGYQRPYQRCIWLVYGRNQCHLRVFWRDRSKRVCRYLRLKSHAGREHQGDERRTQHLNTVYRQRHLSDRENHHGDGLARWHRCHHRHDKYRPGENGGGYAVYRRDSGHVSDRRLFGLHHFTCRGYQRLSEGPWAVHHVCFRLAAGDGFPVGEQLHKLA
1242705..1242932                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AV44_06680; phage(gi169257321)     5.51e-41            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGLATDDEKAQLDEWKKYRVLVNRVDTLNPDWPEKPS
complement(1243134..1243856)       type III secretion protein SopE2; AV44_06685                                         N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKNDVFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIQNTP
1244066..1244307                   PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; AV44_06690; phage(gi169936026)         7.96e-15            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555EMERELIVERTSAGLAAAREQGQIGGRRPKLTTEQWAQPGASLGPEYRDSRRLFMMLAFRRCTENFRRVTCLCHSWENAA
complement(1244336..1245136)       hypothetical protein; AV44_06695                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MIINVGHVATEKFDTTGVSACNNQQSTSVDLSSCIINAASECTVFVRTIIKKSDSYDAMQIDRLKIDTQEKYDALNLQREHHKKFLQTIKANSFDRAMAERPENPISLSLIYSSIDSIKYNTGNCADMSLILGAIIAKYIPQRLTGIGFSKNNVFDARISTSLMYNSASGGNHVVVFLTFTDSKGISEYILDPWLDARIFKKEESYEIYKNNSSEYINENHCFEAYDKYTAIMNSAEYIDAITKTINLLYRVNLDEIQLTNPFKFI
1246009..1246045                   attR                                                                                 N/A                 CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA
complement(1246081..1246350)       PHAGE_Entero_HK022_NC_002166: integrase; AV44_06700; phage(gi9634144)                3.53e-15            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MISAGIRKNSPTGNIHPDGLTKKFVKARKISDVKCSDNPPTFHEIRSLLGRLYKDERGEEFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(1246365..1246934)       PHAGE_Entero_HK022_NC_002166: integrase; AV44_06705; phage(gi9634144)                1.88e-47            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEMILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRTAAEYLPVWFPLAMDLALVTGQRREDIVNMKFSDIVDGRLHVTQIKTGMKIAFPLSLTLQAPGLRPGRLSIAADW
complement(1246994..1247647)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; AV44_06710; phage(gi169257272)     1.20e-15            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKPQPTGELADEPATPEAVEQDTTEHHPAPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVHNNYSASNQGEKEEVVQEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
1247678..1247908                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; AV44_06715; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1247962..1248495                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AV44_06720; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1248752..1248919)       lytic enzyme; AV44_06725                                                             N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1248984..1249172)       hypothetical protein; AV44_25425                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKYEQLSTTTT
1249227..1249718                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AV44_06730; phage(gi169257298)     2.41e-35            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MDGELKNLKCNICQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMETPVSQAAEHQGPNKMTPKERKNWFDSEKGRFWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWSDKLERDKGWSADQLNEAQDVVDEARILLVKAIQETADDDGE
1249705..1249884                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; AV44_06735; phage(gi169257185)     6.07e-29            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGIKQFMFVPRGANTAVPWDDTLASQSFPK
1249904..1250278                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; AV44_06740; phage(gi169257299)     3.62e-69            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MFRDGSFLQIGWPSITVFSSSDYKRVALTDYDRFPEDIDGEGDGFSLASKRTTTFMSAGMTPAESSPGREITDVKWRRSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGDWFQSAMENMVGYG
1250271..1250867                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AV44_06745; phage(gi169257320)     5.26e-120           SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MGEVQTKAPLDSLALTGTPTAPMPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYVGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEY
1251188..1251874                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AV44_25430; phage(gi16765208)     1.98e-90            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MDGNKSHSYTARAQDIDLGTKTTSSFDYGTKSTNTTGNHTNQFGGYINSYWGDSNHTSFQLGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVVADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPDSVARQIVLI
1252087..1252323                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AV44_25435; phage(gi16765208)     9.15e-47            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MNDEAAEAAARLREAEGTKNRLLQITSEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1252420..1252620)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; AV44_25440; phage(gi169257211)     1.14e-41            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MKHVKSVFLAMVLILPSSLYSALTIAADSQDHKKEETIKPIPQKWCTLWPAGIPFPEDWFKMCRGY
1257466..1257477                   attR                                                                                 N/A                 CTTATGATCAAT

#### region 3 ####
1466672..1466684                   attL                                                                                 N/A                 CTTTTTTGAATTA
1467009..1468382                   PHAGE_Entero_CAjan_NC_028776: helicase-like protein; AV44_07995; phage(gi971742387)     3.74e-06            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQPASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPSLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
complement(1468426..1469361)       tRNA 2-thiocytidine(32) synthetase TtcA; AV44_08000                                  N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MQEIQKNTKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIVRFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVDGGDLAFDREEIPLQPAGWQPEEDDTALEALRLDVIEVK
complement(1469413..1469697)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AV44_25530; phage(gi18249865)     2.93e-32            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555FMPRMSKGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
complement(1469678..1470295)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; AV44_08015; phage(gi985761253)     1.22e-47            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MSDNKTEYSYYIKVKNESARKRLGFPFAFWWKTESSEAAATARLAVSMLDAGFEPTDFAKPVRVNSPAVNELPPEGSFDTTFCQKYELGGEDGKTFMLIPGTPATDAHDEKTEECADDAGTEESGTDTSDNDECQDCEVSVATLPFPQRVLHIFTYAATDKKYLHHATRAQRRHITVLEMEQENSYIQNLLMVLRKSEQVHAQDE
complement(1470323..1470640)       hypothetical protein; AV44_08020                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MKNVPESVIAELRQLSGKIRTLCIENNMPCVVSYARDCDDESVSRTLVAYTDSETGAYDRSITAAIMLLKMNEAPPENFISLLKLMECKELVTNAFCSMKNESLH
complement(1470725..1470946)       PHAGE_Shigel_Stx_NC_029120: Kil protein; AV44_08025; phage(gi985761255)              1.16e-40            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MIAHHFGTDEIPRQCITPGDYVIHDGRTYIASANNIKKRRLYIRDLTTQRCITDCMVKVWLNRNGLPAKAESW
1471384..1471905                   hypothetical protein; AV44_08035                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MSETALVIVKFLIGKSVGQFMLTVALFFLIIIFIPRDITELIEARSDLPYAVQIFSFAVAYLIVLILKVTGYFFVSALPLCQRRGRAKRMLKTLNSLSTEQLFLLEPFLKTHSPTFRASWDNPDADALVKAGIVRPAGSCIDGVSVMFKIEPEYESLMLSTWNPCTKRFDISR
complement(1472013..1472177)       PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; AV44_25535; phage(gi472340166)     7.43e-11            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MDKLQKIHLGNNESLVCGVFPNQDGTFTAMTYTRSRTFKTETGARRWLERNSGE
complement(1472553..1473020)       PHAGE_Pseudo_F116_NC_006552: transcriptional regulator; AV44_08055; phage(gi56692918)     1.71e-10            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MRKKREEIAPPEATQRLRAIWDAKKRDLKLTQEIAADLMGFETQSTVSHYLNGKAPLNTDAALKFSVLLRVKPEELRPDLADLMNYVRSSGTYDDNFEGGGWRMVSRQQADLLNLFDILPESEKEKLIDRLKGQNELYKEAFQNMLAAQKRLKNQ
1473293..1473622                   PHAGE_Shigel_Stx_NC_029120: LygF; AV44_08065; phage(gi985761265)                     4.59e-22            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MNSGLITLTELRRMTGLTIYSTRHYLDKAERCGDVYQAGRRGGIFPSEEAYRAWKKQAKVDADLIWKLPDGEVRRYDRHHNVICRECRKSEYMQRVLAFYRGNFQEVLL
complement(1473784..1474338)       hypothetical protein; AV44_08070                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MNKINVLGVIIKHYKTMSDQRGTMLMSDITVHFIVPLSLSFVLCWTYGIMKPAIASVFVNFGAITTALLMSAVIMIYEQKQKTITKISDIIEGNKSRDKLISLNTNKTIYEQLCHNVAYAILTSIVLVIFSVIIYFLPDNAVDLMKWYFRAPAYIVSFLAYTSFFITVITFLMVIKRFSTILDN
complement(1474335..1475267)       hypothetical protein; AV44_08075                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MHSVNFYSFRVLTHKGSRASKKLNDLGLSNKKTAYELFVDYFTLYKNTPIEFGVSKTKISLEQHTKLHFDNTKKIIYGYIKVGKYGESSEIKDVKLKKVHYRTTAYDVTLKERYILIYLPDNLEEGIIAFHSCDNISARGVLSDSITEYLKKQFQLEARINPLHHKKIPQYILNSELKQIKAQGYKAPEDIADSFGKNKTNIKTDLIIKANDGIFGSFRDLRNKNIGNIIEIIEDKCDAIKVSLQLGSRTVVFNYDTILKKGISAELDDNDLKIDPLTGIPDLTALHDTIKNLSNDILEELHCGNKGVII
complement(1475448..1475592)       hypothetical protein; AV44_25540                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MLTGAFLYLPFGVHAGRPQAPATILLNSPFPANRFYPQRKFYQYPLA
1475637..1475849                   PHAGE_Entero_933W_NC_000924: protein MokW; AV44_08080; phage(gi9632542)              2.64e-39            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MLCTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
1476373..1476972                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; AV44_08090; phage(gi435439315)     1.47e-71            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MAHLQLVKQTSSGLLLPATPESEDFLRSVKIGAWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPIGGAILPQEQELITGFVDFLCESAAQGHSPALSDAAEQYLHKVAVNRTLDVALLKSFDAFREWVTIQAGFYTEHYYPDGSRGRRAKSIAFANMDETEFQQVYKAVLNVLWNWILFRKFSSPEEVENVAAQLLEFA
1476972..1477262                   PHAGE_Shigel_Stx_NC_029120: hypothetical protein; AV44_08095; phage(gi985761275)     1.41e-30            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MADLRKAARGLMCTVRIPGHCNHNPETSVLAHYRLAGTCGTATKPNDMQAAIACSSCHDIVDGRVKIDDFTKTEIRLMHAEGVFRTQEIWREKGIL
1477259..1477795                   PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; AV44_08100; phage(gi100055)       6.94e-07            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MIYPTNTGKSGEHLRLSTLESVWIQGKLRMWGRWSYIGGGKTGNMFNQLLASKKLTKTAINDALRRMKKAGLEKPELEVFLREMINGKQKSWLAHCTDTEALIIDRVVGEVLTDHPGLLGILNQRYVGRGMSKRRMAELLNEQYPEWALITCRRRVEQWLSIAEFILYSPMRKAFDYA
1478820..1478832                   attR                                                                                 N/A                 CTTTTTTGAATTA
1479166..1479177                   attL                                                                                 N/A                 CAATTTTTTTAC
1479966..1480361                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AV44_08105; phage(gi100118)       1.12e-62            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MLGIFRKKTRKAIVEVKKMENRDAVEATVWGAYSIAYADGTCDAKEIAVLEKTIAALPAFAPFSGEIAQMSANIRARYEASPRSANAQALRELADVAGTAEAVDVLCLYWPRSCPALLTTTVNRWMRCVQW
1480461..1480742                   PHAGE_Entero_phiP27_NC_003356: putative holin; AV44_08115; phage(gi18249893)         2.47e-24            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MESNLTGTLNAGLCLVTVLALFLYRRNGARYKPGIAWLSYLLMLGYALVPFRFLAGHYPSSSWPVVLMNALFCGLVLWARGNVSKILSLLRLR
1480739..1481284                   PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; AV44_08120; phage(gi422935930)         1.04e-86            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MKPKDEIFDEILGKEGGYVNHPDDKGGPTKWGITEKVARAHGYRGDMRNLTRGQALEILETDYWYGPRFDRVAKASPDVAAELCDTGVNMGPSVAAKMLQRWLNVFNQGGRLYPDMDTDGRIGPRTLNALRVYLEKRGKDGERVLLVALNCTQGERYLELAEKREADESFVYGWMKERVLI
1481308..1481490                   hypothetical protein; AV44_08125                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MPRMAAKWALVAILVPFLLVGCASLDKARQIFEAAGQSRSERLLGLKSKSPVVADNWGFL
complement(1481826..1481966)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AV44_08130; phage(gi18249865)     6.30e-16            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
1481985..1482137                   multidrug transporter; AV44_08135                                                    N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MSRMVRITATNASTFLWQDTQWFKSVFILSSVLLKISSRPEKYWNEEMYD
1482130..1482468                   PHAGE_Acinet_ZZ1_NC_018087: putative quaternary ammonium compound-resistance protein qacE; AV44_08140; phage(gi392973036)     3.10e-13            SalmonellaentericasubspentericaserovarEnteritidisstrEC20120555MTKEAVIFLFIAIVVEVIATISLKLSDSFTRLVPSLVTIIGYCIAFWCLTIPMRTIPAGIIYAIWSGVGIVLIGLIGWLFLGQKLDMPAIIGMLLIICGVIVINLFSKSVSH
1492464..1492475                   attR                                                                                 N/A                 CAATTTTTTTAC
