gi|604094636|ref|CP007402.1|  Salmonella enterica subsp. enterica serovar Enteritidis str. [asmbl_id: NC_000000].4685876, gc%: 51.46%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
920117..920130                     attL                                                                                 N/A                 TTTCCGCCAGCTCA
932050..933708                     PHAGE_Entero_P2_NC_001895: Old; AV42_04860; phage(gi9630369)                         1e-05               MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPELDLYHFVREDFWFPPGDIKGREHHLHIILTFRETQPGRHRVRRYRALEACWSLCEDDFHRIFYRLEGECGADGSVMTLRSFLNSDGQPLLVENINDQVRHLVRLMPVLRLRDARFMRRIRNGTVPNVPDVEVTARQLDFLARELATRPQNLTDGQIRQGLSAMVQLLEHYFSEQGAGQARHRLMRRRSQNEQRSWRYLDIINRMIDKPGSRSHRVILLGLFSTLLQAKGTLRLHKDARPLLLVEDPETRLHPIMLSVAWQLLNLLPLQRIATTNSGELLSLTPVEHVVRLVRESSRVAAWRLGPGGLSAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREEEREHLTALPALDMEHFMYRQGFADVFHRVAQLPPNVPMNTRKIITKAIHRSSKPDLAIEVAMEAGRRGIDAVPPLFRKMFSRVVWLARGRAD
complement(933705..934673)         hypothetical protein; AV42_04865                                                     N/A                 MSRITIMTQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLTNLTQWPELNTLLARQPRLPIRLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKFETKTGELFQLDLVSLVSLDKEGESTIVVRDAQLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEQIIAVSNDAHVYRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYALPLAIARKSESEIASKKRAEYRRRYALLDSVVEQVPVTFKR
934801..935919                     PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; AV42_04870; phage(gi431810494)     5e-05               MRAKGKKFKKRYLVIILILLVGGMAGWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKVDVGAQVSGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLRAGQKAWFTIAGDPQTRYEGVLKDILPTPEKINDAIFYYARFEVPNPKRILRLDMTAQVYIQLMDVKNVLIIPLAALGEPVGGNRYKVALLRNGEKREREVVIGERNDTDVEVVKGLEAGDEVIIGESRPGATP
935916..937862                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; AV42_04875; phage(gi371496158)       7e-41               MTALLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAEEKKREQGVDAAVVNTAPGWRQFASSFREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYGMSFREGNTFNSVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLVGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE
complement(937992..938213)         PHAGE_Lactoc_bIL312_NC_002671: Csp; AV42_04885; phage(gi13095918)                    7e-14               METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPIEAEAVA
938537..938857                     PHAGE_Cronob_vB_CsaM_GAP32_NC_019401: ATP-dependent Clp protease; AV42_04890; phage(gi414087232)     4e-05               MGKTNDWLDFDQLVEDSVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
938888..941164                     PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; AV42_04895; phage(gi15800640)     0.0                 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDIVNFISHGTRKDEPSQSSDLGNQPTGDEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAILVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMGEIKKVFTPEFRNRLDNIIWFDHLSGEVIHQVVDKFIVELQAQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNALTYGFQSAQKHKPEAAH
complement(941377..941574)         hypothetical protein; AV42_04900                                                     N/A                 MPGLIGYWKQLPTKDEYIKKHNMSKISCYSCGHEKFSDVGLIQVWDNHRRILCAKCKTTLFREED
complement(941736..942113)         PROPHAGE_Escher_CFT073: P4 family integrase; AV42_04905; phage(gi26248244)           3e-48               MHKYLSVVKKHRVPLSDAAVDLLKDLPRLKDNNHVFPAPRAETLSDMSLLAVLKRMGYIDLTQHGFRSTFREWAGEATDYQREVIEHALAHQLADKAEAAYQRGTLWPKRVALMDDWTGYSTANS
949183..949196                     attR                                                                                 N/A                 TTTCCGCCAGCTCA

#### region 2 ####
1013344..1013358                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1013393..1013515)       PHAGE_Gifsy_2_NC_010393: bacteriophage integrase; AV42_05240; phage(gi169257268)     2e-15               MVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
1013824..1014453                   hypothetical protein; AV42_05250                                                     N/A                 MYGVQGTPDCYRIELKNVYGVQENLISYRQASLGAWVAIAGGGDPYEVAYAIYKAVPDISVLTNDVVNPSGAAVDKKTIPIIVYPDTYHVPFVVPSSQNVTLLITWNTASTSYIDPTGIEKAVQQSIADYINGIATGEPINIFLIRDIFLNQVKGLVSSNLVSMIDIQVGINGKIVPPATDSSLVYGDTYAYFSTSSSQIQVKQYGSSS
1014437..1015063                   hypothetical protein; AV42_05255                                                     N/A                 MAALLESIIPAYPYTQYNDDPDIVAFFDAYNKLAQGYLDYFNNLNLPCWTSPAITGELLDWIAAGIYGESRPLLQISEDAIARGAYNTIEYNNVAYAKLRNYVPGSASYVPDDYFKRILTWNFYKGDGSHFCINWFKRRLARFIHGANGIDPPVQSTFDISVMPDKGIFFVSIPDYGDGVGHFLKDAIDQSLVKLPFIYTYSVTVVEQ
1015060..1016769                   PHAGE_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AV42_05260; phage(gi169257320)     2e-178              MIIGFGNNVVSSLAADITASQTTIQVMPGVGAMFANLLTSDYANSSNPLKTYAKITLTDAKETVFEVCHLTAVNNDMLTVIRGQEGTTAKGWSLNDVIANFATRGSENQFVQIEELQSGHYVAGVAGGTENNLTLELPATYFVNGGVDWTLRTPLVVIPALNNTGASTLQLTMGGRVLGIFPLYKGNKAELSANDIIKDIPVLCVLDNTKTYFSVLNPLEIYLGSRYLQKDQNLSDVPDKAKGRSSLEVYSKTESDENYMAKSQCGADIPNKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQVTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1016769..1017350                   PHAGE_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AV42_05265; phage(gi169257321)     5e-111              MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
1017828..1018796                   PHAGE_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; AV42_05275; phage(gi169257322)     0.0                 MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
1019130..1019312                   PHAGE_Stx2_converting_1717_NC_011357: transposase; AV42_05285; phage(gi209447153)     5e-15               MFFGSDRSGEAAAIIYSLLGTCKLNGVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(1019444..1020070)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein F116p67; AV42_05290; phage(gi56692976)     9e-31               MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(1020254..1020433)       hypothetical protein; AV42_05295                                                     N/A                 MIVNLYQDNYSGYRQHGGSGVGGSNPLVPTKIPLKNQPVRAVFFMAQFPTGKLWGETGE
complement(1020430..1021116)       virulence protein; AV42_05300                                                        N/A                 MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(1021387..1021578)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; AV42_05305; phage(gi428782688)     9e-25               MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
1021884..1021898                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 3 ####
complement(1222626..1223324)       PHAGE_Cronob_vB_CsaM_GAP32_NC_019401: putative DNA polymerase III epsilon subunit; AV42_06515; phage(gi414087193)     2e-15               MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMSLYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
complement(1223348..1224004)       hypothetical protein; AV42_06520                                                     N/A                 MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(1224112..1224342)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; AV42_06525; phage(gi422936677)     8e-17               MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
1224480..1224854                   hypothetical protein; AV42_06530                                                     N/A                 MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
1224858..1225730                   membrane protein; AV42_06535                                                         N/A                 MLTFVWITLRFIHFASLMLVYGCALYGAWLAPASIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVVGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
1225747..1226100                   PHAGE_Entero_PsP3_NC_005340: gp28; AV42_06540; phage(gi41057381)                     7e-08               MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIRIDNPAKPGEKMSLAPFIERAQKLCDPSNS
1226387..1226399                   attL                                                                                 N/A                 TTTCCGAAATTTT
complement(1226483..1226851)       PHAGE_Entero_mEp235_NC_019708: integrase; AV42_06550; phage(gi428781836)             3e-21               MKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
1227384..1227408                   attL                                                                                 N/A                 GTGTGGTTTTGCGCTATGAAGTTGT
complement(1227537..1227815)       excisionase; AV42_06555                                                              N/A                 MTMSFVRLETWGELNYPDDPPPLTTLRRWARNGNIYPTPVLHGRTYRVDPDAFYIKPNKVGLVLEQHHPNGRTGKPSALLEKLISESKKVRC
1228229..1230208                   PHAGE_Parame_bursaria_Chlorella_virus_FR483_NC_008603: hypothetical protein FR483_N003L; AV42_06560; phage(gi155370101)     3e-128              MRLKLIVKSFALAGLLSSTALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAHKGFIAGLPEEVIKGEQGNVIWNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTDGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKAGMDLYFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPDASGQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLRGAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLPDSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKADFDQGNYRWVAQVVSKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHINGEKAGNARAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATITLNRDTLNKIILKEETLKQAQDKGEVNVTGNAAKLDEMLGYMDKFEFWFNIVTP
complement(1230226..1230417)       membrane protein; AV42_06565                                                         N/A                 MNHATTSYCHLMKKAVHNRIRTDWYQGHVLQQQIHKMKQDIKNEGKIEYKKRTELSEVTSLQH
1230840..1231145                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; AV42_06570; phage(gi423262436)     4e-08               MMIINSLLYIHVENEDALKMLKFVIYGDTVKNLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDTLINELTIRAGYHE
1231209..1231808                   PHAGE_Gifsy_2_NC_010393: hypothetical protein STM1020.Gifsy2; AV42_06575; phage(gi169257286)     2e-55               MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWMPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTEHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
1231805..1232032                   PHAGE_Gifsy_2_NC_010393: NinG; AV42_06580; phage(gi169257288)                        8e-17               MKMTWFQHPVCTTEEADELVAGYRRRGVKVERYGEAEVLELESNNTPQRWTVEELKEIRIAALADLRALKKLEAA
1232162..1232851                   PHAGE_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; AV42_06590; phage(gi169257244)     1e-89               MNTQYLEYVRQQLIVATADLSGATKGQLQAWLENAQLYTKNYPRKKQRIRDEVTGKMITLNNPPIAGKQSLAKGSAIPLVQPVEYSTSSWRRALLSLEEHNKAWLLWNYSENTCWEYQVTVTRWAWEKFSQQLEGKRVAKKTLARLRQLIWLAAQDVKAELARRETYEYQTLAELMGVAKSTWTETYMSHWLVMRNSFKRLDSDALISVTRSRSQQKATNLDISLAKPN
1232948..1233472                   hypothetical protein; AV42_06595                                                     N/A                 MFYRDLFQVFGPDPLYKEEEGIAILREQYGIEAPEQIFKQIYCGLSNNSEFQTLYGHLNLKSLKWDLVRLKTAEFTKFGRNATYPDYMLEISEDFNACGSKFCIDAREEVANHWLKFGTWAEPPMFIERSLIIPGESGLHLMEGHTRLGTLLGAIKYKFVQLADTHELYIASQK
complement(1233846..1234295)       PHAGE_Gifsy_2_NC_010393: hypothetical protein STM1025.Gifsy2; AV42_06600; phage(gi169257293)     1e-82               MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENSLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1234656..1235342)       PHAGE_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; AV42_06605; phage(gi169257294)     3e-133              MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELRDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1235612..1235947                   PHAGE_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; AV42_06610; phage(gi169257295)     4e-59               MKMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1235934..1236383                   PHAGE_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; AV42_06615; phage(gi169257296)     1e-82               MRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1236401..1236880                   PHAGE_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; AV42_06620; phage(gi169257297)     2e-86               MFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
1237088..1237402                   PHAGE_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AV42_06625; phage(gi169257298)     7e-53               MDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSV
1237479..1237658                   PHAGE_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; AV42_06635; phage(gi169257312)     4e-29               MIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1237775..1238308)       PHAGE_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; AV42_06640; phage(gi169257313)     3e-102              MKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1238398..1239093                   PHAGE_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; AV42_06645; phage(gi169257314)     1e-134              MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPGADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1239229..1239384                   PHAGE_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; AV42_06650; phage(gi169257315)     1e-20               MYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGTVCRAC
1239378..1240328                   PHAGE_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; AV42_06655; phage(gi169257317)     0.0                 MLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETMDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFI
1242719..1242946                   PHAGE_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AV42_06670; phage(gi169257321)     2e-33               MKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGLATDDEKAQLDEWKKYRVLVNRVDTLNPDWPEKPS
complement(1243148..1243870)       type III secretion protein SopE2; AV42_06675                                         N/A                 MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKNDVFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIQNTP
complement(1244350..1245150)       hypothetical protein; AV42_06685                                                     N/A                 MIINVGHVATEKFDTTGVSACNNQQSTSVDLSSCIINAASECTVFVRTIIKKSDSYDAMQIDRLKIDTQEKYDALNLQREHHKKFLQTIKANSFDRAMAERPENPISLSLIYSSIDSIKYNTGNCADMSLILGAIIAKYIPQRLTGIGFSKNNVFDARISTSLMYNSASGGNHVVVFLTFTDSKGISEYILDPWLDARIFKKEESYEIYKNNSSEYINENHCFEAYDKYTAIMNSAEYIDAITKTINLLYRVNLDEIQLTNPFKFI
complement(1246095..1246364)       PHAGE_Entero_mEp235_NC_019708: integrase; AV42_06690; phage(gi428781836)             7e-13               MISAGIRKNSPTGNIHPDGLTKKFVKARKISDVKCSDNPPTFHEIRSLLGRLYKDERGEEFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(1246379..1246948)       PHAGE_Entero_mEp235_NC_019708: integrase; AV42_06695; phage(gi428781836)             3e-40               MSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEMILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRTAAEYLPVWFPLAMDLALVTGQRREDIVNMKFSDIVDGRLHVTQIKTGMKIAFPLSLTLQAPGLRPGRLSIAADW
1246995..1247019                   attR                                                                                 N/A                 GTGTGGTTTTGCGCTATGAAGTTGT
complement(1247008..1247661)       PHAGE_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; AV42_06700; phage(gi169257272)     1e-17               MPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKPQPTGELADEPATPEAVEQDTTEHHPAPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVHNNYSASNQGEKEEVVQEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
1247692..1247922                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; AV42_06705; phage(gi169257182)     9e-30               MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1247976..1248509                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AV42_06710; phage(gi16765210)     2e-94               MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1248766..1248933)       lytic enzyme; AV42_06715                                                             N/A                 MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
1249241..1249732                   PHAGE_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AV42_06720; phage(gi169257298)     2e-28               MDGELKNLKCNICQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMETPVSQAAEHQGPNKMTPKERKNWFDSEKGRFWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWSDKLERDKGWSADQLNEAQDVVDEARILLVKAIQETADDDGE
1249719..1249898                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; AV42_06725; phage(gi169257185)     8e-25               MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGIKQFMFVPRGANTAVPWDDTLASQSFPK
1249918..1250292                   PHAGE_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; AV42_06730; phage(gi169257299)     1e-60               MFRDGSFLQIGWPSITVFSSSDYKRVALTDYDRFPEDIDGEGDGFSLASKRTTTFMSAGMTPAESSPGREITDVKWRRSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGDWFQSAMENMVGYG
1250285..1250881                   PHAGE_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AV42_06735; phage(gi169257320)     3e-99               MGEVQTKAPLDSLALTGTPTAPMPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYVGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEY
1257501..1257513                   attR                                                                                 N/A                 TTTCCGAAATTTT

#### region 4 ####
1453449..1453460                   attL                                                                                 N/A                 AAATAAACATCT
1464302..1465414                   PHAGE_Celeri_P12053L_NC_018280: putative phage tail fiber protein; AV42_07960; phage(gi399528893)     9e-05               MVCTFLLVDTLQITFLHDLPILITCNIIYLISTLLLWWYMTCYLVVPINTVKKSIEEVAAGNLSIHISEFGNNCAGRLIPGINSLSENISALVREIRSSSQTAMTLSEQLAARSMSLSVKTEQQSASLIQTAASMDEMAASTKNNADNTRMASIQADCATQCARKGGELMVRVTENMRSITDCASQMTEIISLIDGIAFQTNILALNAAVEAARAGDHGKGFSVVAGEVRNLAHRSAEAAKSIKALIDVTHENVRQGAAIVQEAEKNMQEIVGGSGQLNVLMSEISTTTREQEKGINQITLALSDLESATHSNVLMVEALSASSDVLKAQVIELQTKTDKFRLSQPGYSEHALSRSHVSPLSTITRRGQA
1465560..1466543                   zinc transporter; AV42_07965                                                         N/A                 MEAIKGSDVNVPDAVFAWLLDGRGGVKPLEDNDVIDSQHPCWLHLNYTHPDSARWLASTPLLPNNVRDALAGESSRPRVSRMGEGTLITLRCINGSTDERPDQLVAMRLYMDERFIVSTRQRKVLALDDVVSDLQEGTGPVDCGSWLVDVCDALTDHASEFIEELHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPWMSDDHRRRMQDIADRLGRGLDEIDACIARTGIMADEIAQVMQESLARRTYTMSLMAMVFLPSTFLTGLFGVNLGGIPGGGWRFGFSLFCILLVVLIGGVTLWLHRSKWL
1466819..1467001                   PHAGE_Acanth_turfacea_Chlorella_virus_1_NC_008724: hypothetical protein ATCV1_Z771L; AV42_07980; phage(gi155371718)     7e-05               MSCLLTLLYLHSSLSDPIPTDPVPIPEPLPRPQPMPDPPPDEEPIKMSHQTPGSARIRAC
1467030..1468403                   PHAGE_Cafete_BV_PW1_NC_014637: putative superfamily II helicase/eIF-4AIII; AV42_07985; phage(gi310831360)     3e-45               MTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQPASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPSLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
complement(1468447..1469382)       PHAGE_Parame_bursaria_Chlorella_virus_FR483_NC_008603: hypothetical protein FR483_N404R; AV42_07990; phage(gi155370502)     6e-09               MQEIQKNTKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIVRFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVDGGDLAFDREEIPLQPAGWQPEEDDTALEALRLDVIEVK
complement(1469434..1469574)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AV42_07995; phage(gi18249865)     2e-12               MTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
complement(1469699..1470316)       PHAGE_Entero_mEp237_NC_019704: exonuclease; AV42_08005; phage(gi435439296)           1e-20               MSDNKTEYSYYIKVKNESARKRLGFPFAFWWKTESSEAAATARLAVSMLDAGFEPTDFAKPVRVNSPAVNELPPEGSFDTTFCQKYELGGEDGKTFMLIPGTPATDAHDEKTEECADDAGTEESGTDTSDNDECQDCEVSVATLPFPQRVLHIFTYAATDKKYLHHATRAQRRHITVLEMEQENSYIQNLLMVLRKSEQVHAQDE
complement(1470344..1470661)       hypothetical protein; AV42_08010                                                     N/A                 MKNVPESVIAELRQLSGKIRTLCIENNMPCVVSYARDCDDESVSRTLVAYTDSETGAYDRSITAAIMLLKMNEAPPENFISLLKLMECKELVTNAFCSMKNESLH
complement(1470746..1470967)       PHAGE_Escher_P13374_NC_018846: host killing protein; AV42_08015; phage(gi410491620)     6e-05               MIAHHFGTDEIPRQCITPGDYVIHDGRTYIASANNIKKRRLYIRDLTTQRCITDCMVKVWLNRNGLPAKAESW
1471405..1471926                   membrane protein; AV42_08025                                                         N/A                 MSETALVIVKFLIGKSVGQFMLTVALFFLIIIFIPRDITELIEARSDLPYAVQIFSFAVAYLIVLILKVTGYFFVSALPLCQRRGRAKRMLKTLNSLSTEQLFLLEPFLKTHSPTFRASWDNPDADALVKAGIVRPAGSCIDGVSVMFKIEPEYESLMLSTWNPCTKRFDISR
complement(1472574..1473041)       PHAGE_Cronob_ENT39118_NC_019934: phage repressor protein; AV42_08045; phage(gi431811060)     2e-08               MRKKREEIAPPEATQRLRAIWDAKKRDLKLTQEIAADLMGFETQSTVSHYLNGKAPLNTDAALKFSVLLRVKPEELRPDLADLMNYVRSSGTYDDNFEGGGWRMVSRQQADLLNLFDILPESEKEKLIDRLKGQNELYKEAFQNMLAAQKRLKNQ
1478872..1478883                   attR                                                                                 N/A                 AAATAAACATCT

#### region 5 ####
1469403..1469414                   attL                                                                                 N/A                 AAATGGGGCAAA
1475715..1475870                   PHAGE_Stx2_converting_II_NC_004914: putative host killer protein; AV42_08070; phage(gi302393105)     4e-19               MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
1476394..1476993                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; AV42_08080; phage(gi435439315)     1e-56               MAHLQLVKQTSSGLLLPATPESEDFLRSVKIGAWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPIGGAILPQEQELITGFVDFLCESAAQGHSPALSDAAEQYLHKVAVNRTLDVALLKSFDAFREWVTIQAGFYTEHYYPDGSRGRRAKSIAFANMDETEFQQVYKAVLNVLWNWILFRKFSSPEEVENVAAQLLEFA
1476993..1477283                   PHAGE_Erwini_phiEt88_NC_015295: hypothetical protein; AV42_08085; phage(gi327198620)     1e-30               MADLRKAARGLMCTVRIPGHCNHNPETSVLAHYRLAGTCGTATKPNDMQAAIACSSCHDIVDGRVKIDDFTKTEIRLMHAEGVFRTQEIWREKGIL
1477280..1477816                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: antitermination protein Q; AV42_08090; phage(gi399528832)     1e-06               MIYPTNTGKSGEHLRLSTLESVWIQGKLRMWGRWSYIGGGKTGNMFNQLLASKKLTKTAINDALRRMKKAGLEKPELEVFLREMINGKQKSWLAHCTDTEALIIDRVVGEVLTDHPGLLGILNQRYVGRGMSKRRMAELLNEQYPEWALITCRRRVEQWLSIAEFILYSPMRKAFDYA
1479987..1480382                   PHAGE_Entero_P1_NC_005856: TciA; AV42_08095; phage(gi46401694)                       7e-48               MLGIFRKKTRKAIVEVKKMENRDAVEATVWGAYSIAYADGTCDAKEIAVLEKTIAALPAFAPFSGEIAQMSANIRARYEASPRSANAQALRELADVAGTAEAVDVLCLYWPRSCPALLTTTVNRWMRCVQW
1480482..1480763                   PHAGE_Entero_phiP27_NC_003356: putative holin; AV42_08105; phage(gi18249893)         1e-20               MESNLTGTLNAGLCLVTVLALFLYRRNGARYKPGIAWLSYLLMLGYALVPFRFLAGHYPSSSWPVVLMNALFCGLVLWARGNVSKILSLLRLR
1480760..1481305                   PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; AV42_08110; phage(gi422935930)         2e-68               MKPKDEIFDEILGKEGGYVNHPDDKGGPTKWGITEKVARAHGYRGDMRNLTRGQALEILETDYWYGPRFDRVAKASPDVAAELCDTGVNMGPSVAAKMLQRWLNVFNQGGRLYPDMDTDGRIGPRTLNALRVYLEKRGKDGERVLLVALNCTQGERYLELAEKREADESFVYGWMKERVLI
1481329..1481511                   hypothetical protein; AV42_08115                                                     N/A                 MPRMAAKWALVAILVPFLLVGCASLDKARQIFEAAGQSRSERLLGLKSKSPVVADNWGFL
1481599..1481610                   attR                                                                                 N/A                 AAATGGGGCAAA
complement(1481847..1481987)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AV42_08120; phage(gi18249865)     2e-12               MTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
1482006..1482158                   multidrug transporter; AV42_08125                                                    N/A                 MSRMVRITATNASTFLWQDTQWFKSVFILSSVLLKISSRPEKYWNEEMYD
1482151..1482489                   PHAGE_Acinet_ZZ1_NC_018087: putative quaternary ammonium compound-resistance protein qacE; AV42_08130; phage(gi392973036)     3e-13               MTKEAVIFLFIAIVVEVIATISLKLSDSFTRLVPSLVTIIGYCIAFWCLTIPMRTIPAGIIYAIWSGVGIVLIGLIGWLFLGQKLDMPAIIGMLLIICGVIVINLFSKSVSH
