gi|604103232|ref|CP007404.1|  Salmonella enterica subsp. enterica serovar Enteritidis str. [asmbl_id: NC_000000].4685865, gc%: 51.43%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
920109..920122                     attL                                                                                 N/A                 TTTCCGCCAGCTCA
932042..933700                     PHAGE_Entero_P2_NC_001895: Old; AV90_04875; phage(gi9630369)                         1e-05               MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPELDLYHFVREDFWFPPGDIKGREHHLHIILTFRETQPGRHRVRRYRALEACWSLCEDDFHRIFYRLEGECGADGSVMTLRSFLNSDGQPLLVENINDQVRHLVRLMPVLRLRDARFMRRIRNGTVPNVPDVEVTARQLDFLARELATRPQNLTDGQIRQGLSAMVQLLEHYFSEQGAGQARHRLMRRRSQNEQRSWRYLDIINRMIDKPGSRSHRVILLGLFSTLLQAKGTLRLHKDARPLLLVEDPETRLHPIMLSVAWQLLNLLPLQRIATTNSGELLSLTPVEHVVRLVRESSRVAAWRLGPGGLSAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREEEREHLTALPALDMEHFMYRQGFADVFHRVAQLPPNVPMNTRKIITKAIHRSSKPDLAIEVAMEAGRRGIDAVPPLFRKMFSRVVWLARGRAD
complement(933697..934665)         hypothetical protein; AV90_04880                                                     N/A                 MSRITIMTQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLTNLTQWPELNTLLARQPRLPIRLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKFETKTGELFQLDLVSLVSLDKEGESTIVVRDAQLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEQIIAVSNDAHVYRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYALPLAIARKSESEIASKKRAEYRRRYALLDSVVEQVPVTFKR
934793..935911                     PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; AV90_04885; phage(gi431810494)     5e-05               MRAKGKKFKKRYLVIILILLVGGMAGWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKVDVGAQVSGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLRAGQKAWFTIAGDPQTRYEGVLKDILPTPEKINDAIFYYARFEVPNPKRILRLDMTAQVYIQLMDVKNVLIIPLAALGEPVGGNRYKVALLRNGEKREREVVIGERNDTDVEVVKGLEAGDEVIIGESRPGATP
935908..937854                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; AV90_04890; phage(gi371496158)       7e-41               MTALLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAEEKKREQGVDAAVVNTAPGWRQFASSFREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYGMSFREGNTFNSVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLVGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE
complement(937984..938205)         PHAGE_Lactoc_bIL312_NC_002671: Csp; AV90_04900; phage(gi13095918)                    7e-14               METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPIEAEAVA
938529..938849                     PHAGE_Cronob_vB_CsaM_GAP32_NC_019401: ATP-dependent Clp protease; AV90_04905; phage(gi414087232)     4e-05               MGKTNDWLDFDQLVEDSVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
938880..941156                     PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; AV90_04910; phage(gi15800640)     0.0                 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDIVNFISHGTRKDEPSQSSDLGNQPTGDEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAILVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMGEIKKVFTPEFRNRLDNIIWFDHLSGEVIHQVVDKFIVELQAQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNALTYGFQSAQKHKPEAAH
complement(941369..941566)         hypothetical protein; AV90_04915                                                     N/A                 MPGLIGYWKQLPTKDEYIKKHNMSKISCYSCGHEKFSDVGLIQVWDNHRRILCAKCKTTLFREED
complement(941728..942105)         PROPHAGE_Escher_CFT073: P4 family integrase; AV90_04920; phage(gi26248244)           3e-48               MHKYLSVVKKHRVPLSDAAVDLLKDLPRLKDNNHVFPAPRAETLSDMSLLAVLKRMGYIDLTQHGFRSTFREWAGEATDYQREVIEHALAHQLADKAEAAYQRGTLWPKRVALMDDWTGYSTANS
949175..949188                     attR                                                                                 N/A                 TTTCCGCCAGCTCA

#### region 2 ####
1013336..1013350                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1013385..1013507)       PHAGE_Gifsy_2_NC_010393: bacteriophage integrase; AV90_05255; phage(gi169257268)     2e-15               MVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
1013816..1014445                   hypothetical protein; AV90_05265                                                     N/A                 MYGVQGTPDCYRIELKNVYGVQENLISYRQASLGAWVAIAGGGDPYEVAYAIYKAVPDISVLTNDVVNPSGAAVDKKTIPIIVYPDTYHVPFVVPSSQNVTLLITWNTASTSYIDPTGIEKAVQQSIADYINGIATGEPINIFLIRDIFLNQVKGLVSSNLVSMIDIQVGINGKIVPPATDSSLVYGDTYAYFSTSSSQIQVKQYGSSS
1014429..1015055                   hypothetical protein; AV90_05270                                                     N/A                 MAALLESIIPAYPYTQYNDDPDIVAFFDAYNKLAQGYLDYFNNLNLPCWTSPAITGELLDWIAAGIYGESRPLLQISEDAIARGAYNTIEYNNVAYAKLRNYVPGSASYVPDDYFKRILTWNFYKGDGSHFCINWFKRRLARFIHGANGIDPPVQSTFDISVMPDKGIFFVSIPDYGDGVGHFLKDAIDQSLVKLPFIYTYSVTVVEQ
1015052..1016761                   PHAGE_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AV90_05275; phage(gi169257320)     2e-178              MIIGFGNNVVSSLAADITASQTTIQVMPGVGAMFANLLTSDYANSSNPLKTYAKITLTDAKETVFEVCHLTAVNNDMLTVIRGQEGTTAKGWSLNDVIANFATRGSENQFVQIEELQSGHYVAGVAGGTENNLTLELPATYFVNGGVDWTLRTPLVVIPALNNTGASTLQLTMGGRVLGIFPLYKGNKAELSANDIIKDIPVLCVLDNTKTYFSVLNPLEIYLGSRYLQKDQNLSDVPDKAKGRSSLEVYSKTESDENYMAKSQCGADIPNKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQVTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1016761..1017342                   PHAGE_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AV90_05280; phage(gi169257321)     5e-111              MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
1017820..1018788                   PHAGE_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; AV90_05290; phage(gi169257322)     0.0                 MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
1019122..1019304                   PHAGE_Stx2_converting_1717_NC_011357: transposase; AV90_05300; phage(gi209447153)     5e-15               MFFGSDRSGEAAAIIYSLLGTCKLNGVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(1019436..1020062)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein F116p67; AV90_05305; phage(gi56692976)     9e-31               MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(1020246..1020425)       hypothetical protein; AV90_05310                                                     N/A                 MIVNLYQDNYSGYRQHGGSGVGGSNPLVPTKIPLKNQPVRAVFFMAQFPTGKLWGETGE
complement(1020422..1021108)       virulence protein; AV90_05315                                                        N/A                 MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(1021379..1021570)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; AV90_05320; phage(gi428782688)     9e-25               MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
1021876..1021890                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 3 ####
complement(1222618..1223316)       PHAGE_Cronob_vB_CsaM_GAP32_NC_019401: putative DNA polymerase III epsilon subunit; AV90_06530; phage(gi414087193)     2e-15               MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMSLYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
complement(1223340..1223996)       hypothetical protein; AV90_06535                                                     N/A                 MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(1224104..1224334)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; AV90_06540; phage(gi422936677)     8e-17               MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
1224472..1224846                   hypothetical protein; AV90_06545                                                     N/A                 MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
1224850..1225722                   membrane protein; AV90_06550                                                         N/A                 MLTFVWITLRFIHFASLMLVYGCALYGAWLAPASIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVVGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
1225739..1226092                   PHAGE_Entero_PsP3_NC_005340: gp28; AV90_06555; phage(gi41057381)                     7e-08               MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIRIDNPAKPGEKMSLAPFIERAQKLCDPSNS
1226379..1226391                   attL                                                                                 N/A                 TTTCCGAAATTTT
complement(1226475..1226843)       PHAGE_Entero_mEp235_NC_019708: integrase; AV90_06565; phage(gi428781836)             3e-21               MKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
1227376..1227400                   attL                                                                                 N/A                 GTGTGGTTTTGCGCTATGAAGTTGT
complement(1227529..1227807)       excisionase; AV90_06570                                                              N/A                 MTMSFVRLETWGELNYPDDPPPLTTLRRWARNGNIYPTPVLHGRTYRVDPDAFYIKPNKVGLVLEQHHPNGRTGKPSALLEKLISESKKVRC
1228221..1230200                   PHAGE_Parame_bursaria_Chlorella_virus_FR483_NC_008603: hypothetical protein FR483_N003L; AV90_06575; phage(gi155370101)     3e-128              MRLKLIVKSFALAGLLSSTALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAHKGFIAGLPEEVIKGEQGNVIWNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTDGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKAGMDLYFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPDASGQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLRGAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLPDSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKADFDQGNYRWVAQVVSKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHINGEKAGNARAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATITLNRDTLNKIILKEETLKQAQDKGEVNVTGNAAKLDEMLGYMDKFEFWFNIVTP
complement(1230218..1230409)       membrane protein; AV90_06580                                                         N/A                 MNHATTSYCHLMKKAVHNRIRTDWYQGHVLQQQIHKMKQDIKNEGKIEYKKRTELSEVTSLQH
1230832..1231137                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; AV90_06585; phage(gi423262436)     4e-08               MMIINSLLYIHVENEDALKMLKFVIYGDTVKNLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDTLINELTIRAGYHE
1231201..1231800                   PHAGE_Gifsy_2_NC_010393: hypothetical protein STM1020.Gifsy2; AV90_06590; phage(gi169257286)     2e-55               MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWMPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTEHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
1231797..1232024                   PHAGE_Gifsy_2_NC_010393: NinG; AV90_06595; phage(gi169257288)                        8e-17               MKMTWFQHPVCTTEEADELVAGYRRRGVKVERYGEAEVLELESNNTPQRWTVEELKEIRIAALADLRALKKLEAA
1232154..1232843                   PHAGE_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; AV90_06605; phage(gi169257244)     1e-89               MNTQYLEYVRQQLIVATADLSGATKGQLQAWLENAQLYTKNYPRKKQRIRDEVTGKMITLNNPPIAGKQSLAKGSAIPLVQPVEYSTSSWRRALLSLEEHNKAWLLWNYSENTCWEYQVTVTRWAWEKFSQQLEGKRVAKKTLARLRQLIWLAAQDVKAELARRETYEYQTLAELMGVAKSTWTETYMSHWLVMRNSFKRLDSDALISVTRSRSQQKATNLDISLAKPN
1232940..1233464                   hypothetical protein; AV90_06610                                                     N/A                 MFYRDLFQVFGPDPLYKEEEGIAILREQYGIEAPEQIFKQIYCGLSNNSEFQTLYGHLNLKSLKWDLVRLKTAEFTKFGRNATYPDYMLEISEDFNACGSKFCIDAREEVANHWLKFGTWAEPPMFIERSLIIPGESGLHLMEGHTRLGTLLGAIKYKFVQLADTHELYIASQK
complement(1233838..1234287)       PHAGE_Gifsy_2_NC_010393: hypothetical protein STM1025.Gifsy2; AV90_06615; phage(gi169257293)     1e-82               MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENSLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1234648..1235334)       PHAGE_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; AV90_06620; phage(gi169257294)     3e-133              MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELRDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1235604..1235939                   PHAGE_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; AV90_06625; phage(gi169257295)     4e-59               MKMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1235926..1236375                   PHAGE_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; AV90_06630; phage(gi169257296)     1e-82               MRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1236393..1236872                   PHAGE_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; AV90_06635; phage(gi169257297)     2e-86               MFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
1237080..1237394                   PHAGE_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AV90_06640; phage(gi169257298)     7e-53               MDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSV
1237471..1237650                   PHAGE_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; AV90_06650; phage(gi169257312)     4e-29               MIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1237767..1238300)       PHAGE_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; AV90_06655; phage(gi169257313)     3e-102              MKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1238390..1239085                   PHAGE_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; AV90_06660; phage(gi169257314)     1e-134              MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPGADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1239221..1239376                   PHAGE_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; AV90_06665; phage(gi169257315)     1e-20               MYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGTVCRAC
1239370..1240320                   PHAGE_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; AV90_06670; phage(gi169257317)     0.0                 MLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETMDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFI
1242711..1242938                   PHAGE_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AV90_06685; phage(gi169257321)     2e-33               MKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGLATDDEKAQLDEWKKYRVLVNRVDTLNPDWPEKPS
complement(1243140..1243862)       type III secretion protein SopE2; AV90_06690                                         N/A                 MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKNDVFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIQNTP
complement(1244342..1245142)       hypothetical protein; AV90_06700                                                     N/A                 MIINVGHVATEKFDTTGVSACNNQQSTSVDLSSCIINAASECTVFVRTIIKKSDSYDAMQIDRLKIDTQEKYDALNLQREHHKKFLQTIKANSFDRAMAERPENPISLSLIYSSIDSIKYNTGNCADMSLILGAIIAKYIPQRLTGIGFSKNNVFDARISTSLMYNSASGGNHVVVFLTFTDSKGISEYILDPWLDARIFKKEESYEIYKNNSSEYINENHCFEAYDKYTAIMNSAEYIDAITKTINLLYRVNLDEIQLTNPFKFI
complement(1246087..1246356)       PHAGE_Entero_mEp235_NC_019708: integrase; AV90_06705; phage(gi428781836)             7e-13               MISAGIRKNSPTGNIHPDGLTKKFVKARKISDVKCSDNPPTFHEIRSLLGRLYKDERGEEFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(1246371..1246940)       PHAGE_Entero_mEp235_NC_019708: integrase; AV90_06710; phage(gi428781836)             3e-40               MSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEMILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRTAAEYLPVWFPLAMDLALVTGQRREDIVNMKFSDIVDGRLHVTQIKTGMKIAFPLSLTLQAPGLRPGRLSIAADW
1246987..1247011                   attR                                                                                 N/A                 GTGTGGTTTTGCGCTATGAAGTTGT
complement(1247000..1247653)       PHAGE_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; AV90_06715; phage(gi169257272)     1e-17               MPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKPQPTGELADEPATPEAVEQDTTEHHPAPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVHNNYSASNQGEKEEVVQEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
1247684..1247914                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; AV90_06720; phage(gi169257182)     9e-30               MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1247968..1248501                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AV90_06725; phage(gi16765210)     2e-94               MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1248758..1248925)       lytic enzyme; AV90_06730                                                             N/A                 MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
1249233..1249724                   PHAGE_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AV90_06735; phage(gi169257298)     2e-28               MDGELKNLKCNICQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMETPVSQAAEHQGPNKMTPKERKNWFDSEKGRFWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWSDKLERDKGWSADQLNEAQDVVDEARILLVKAIQETADDDGE
1249711..1249890                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; AV90_06740; phage(gi169257185)     8e-25               MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGIKQFMFVPRGANTAVPWDDTLASQSFPK
1249910..1250284                   PHAGE_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; AV90_06745; phage(gi169257299)     1e-60               MFRDGSFLQIGWPSITVFSSSDYKRVALTDYDRFPEDIDGEGDGFSLASKRTTTFMSAGMTPAESSPGREITDVKWRRSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGDWFQSAMENMVGYG
1250277..1250873                   PHAGE_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AV90_06750; phage(gi169257320)     3e-99               MGEVQTKAPLDSLALTGTPTAPMPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYVGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEY
1257493..1257505                   attR                                                                                 N/A                 TTTCCGAAATTTT

#### region 4 ####
1453435..1453446                   attL                                                                                 N/A                 AAATAAACATCT
1464288..1465400                   PHAGE_Celeri_P12053L_NC_018280: putative phage tail fiber protein; AV90_07970; phage(gi399528893)     9e-05               MVCTFLLVDTLQITFLHDLPILITCNIIYLISTLLLWWYMTCYLVVPINTVKKSIEEVAAGNLSIHISEFGNNCAGRLIPGINSLSENISALVREIRSSSQTAMTLSEQLAARSMSLSVKTEQQSASLIQTAASMDEMAASTKNNADNTRMASIQADCATQCARKGGELMVRVTENMRSITDCASQMTEIISLIDGIAFQTNILALNAAVEAARAGDHGKGFSVVAGEVRNLAHRSAEAAKSIKALIDVTHENVRQGAAIVQEAEKNMQEIVGGSGQLNVLMSEISTTTREQEKGINQITLALSDLESATHSNVLMVEALSASSDVLKAQVIELQTKTDKFRLSQPGYSEHALSRSHVSPLSTITRRGQA
1465546..1466529                   zinc transporter; AV90_07975                                                         N/A                 MEAIKGSDVNVPDAVFAWLLDGRGGVKPLEDNDVIDSQHPCWLHLNYTHPDSARWLASTPLLPNNVRDALAGESSRPRVSRMGEGTLITLRCINGSTDERPDQLVAMRLYMDERFIVSTRQRKVLALDDVVSDLQEGTGPVDCGSWLVDVCDALTDHASEFIEELHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPWMSDDHRRRMQDIADRLGRGLDEIDACIARTGIMADEIAQVMQESLARRTYTMSLMAMVFLPSTFLTGLFGVNLGGIPGGGWRFGFSLFCILLVVLIGGVTLWLHRSKWL
1466805..1466987                   PHAGE_Acanth_turfacea_Chlorella_virus_1_NC_008724: hypothetical protein ATCV1_Z771L; AV90_07990; phage(gi155371718)     7e-05               MSCLLTLLYLHSSLSDPIPTDPVPIPEPLPRPQPMPDPPPDEEPIKMSHQTPGSARIRAC
1467016..1468389                   PHAGE_Cafete_BV_PW1_NC_014637: putative superfamily II helicase/eIF-4AIII; AV90_07995; phage(gi310831360)     3e-45               MTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQPASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPSLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
complement(1468433..1469368)       PHAGE_Parame_bursaria_Chlorella_virus_FR483_NC_008603: hypothetical protein FR483_N404R; AV90_08000; phage(gi155370502)     6e-09               MQEIQKNTKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIVRFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVDGGDLAFDREEIPLQPAGWQPEEDDTALEALRLDVIEVK
complement(1469420..1469560)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AV90_08005; phage(gi18249865)     2e-12               MTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
complement(1469685..1470302)       PHAGE_Entero_mEp237_NC_019704: exonuclease; AV90_08015; phage(gi435439296)           8e-21               MSDNKTEYSYYIKVKNESARKRLGFPFAFWWKTESSEAAATARLAVSMLDAGFEPTDFAKPVRVNSPAVNELPPEGSFDTTFCQKYELGGEDGKTFMLIPGTPATDAHDEKTEECADDAGTEESRTDTSDNDECQDCEVSVATLPFPQRVLHIFTYAATDKKYLHHATRAQRRHITVLEMEQENSYIQNLLMVLRKSEQVHAQDE
complement(1470330..1470647)       hypothetical protein; AV90_08020                                                     N/A                 MKNVPESVIAELRQLSGKIRTLCIENNMPCVVSYARDCDDESVSRTLVAYTDSETGAYDRSITAAIMLLKMNEAPPENFISLLKLMECKELVTNAFCSMKNESLH
complement(1470732..1470953)       PHAGE_Escher_P13374_NC_018846: host killing protein; AV90_08025; phage(gi410491620)     6e-05               MIAHHFGTDEIPRQCITPGDYVIHDGRTYIASANNIKKRRLYIRDLTTQRCITDCMVKVWLNRNGLPAKAESW
1471391..1471912                   membrane protein; AV90_08035                                                         N/A                 MSETALVIVKFLIGKSVGQFMLTVALFFLIIIFIPRDITELIEARSDLPYAVQIFSFAVAYLIVLILKVTGYFFVSALPLCQRRGRAKRMLKTLNSLSTEQLFLLEPFLKTHSPTFRASWDNPDADALVKAGIVRPAGSCIDGVSVMFKIEPEYESLMLSTWNPCTKRFDISR
complement(1472560..1473027)       PHAGE_Cronob_ENT39118_NC_019934: phage repressor protein; AV90_08055; phage(gi431811060)     2e-08               MRKKREEIAPPEATQRLRAIWDAKKRDLKLTQEIAADLMGFETQSTVSHYLNGKAPLNTDAALKFSVLLRVKPEELRPDLADLMNYVRSSGTYDDNFEGGGWRMVSRQQADLLNLFDILPESEKEKLIDRLKGQNELYKEAFQNMLAAQKRLKNQ
1478858..1478869                   attR                                                                                 N/A                 AAATAAACATCT

#### region 5 ####
1469389..1469400                   attL                                                                                 N/A                 AAATGGGGCAAA
1475701..1475856                   PHAGE_Stx2_converting_II_NC_004914: putative host killer protein; AV90_08080; phage(gi302393105)     4e-19               MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
1476380..1476979                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; AV90_08090; phage(gi435439315)     1e-56               MAHLQLVKQTSSGLLLPATPESEDFLRSVKIGAWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPIGGAILPQEQELITGFVDFLCESAAQGHSPALSDAAEQYLHKVAVNRTLDVALLKSFDAFREWVTIQAGFYTEHYYPDGSRGRRAKSIAFANMDETEFQQVYKAVLNVLWNWILFRKFSSPEEVENVAAQLLEFA
1476979..1477269                   PHAGE_Erwini_phiEt88_NC_015295: hypothetical protein; AV90_08095; phage(gi327198620)     1e-30               MADLRKAARGLMCTVRIPGHCNHNPETSVLAHYRLAGTCGTATKPNDMQAAIACSSCHDIVDGRVKIDDFTKTEIRLMHAEGVFRTQEIWREKGIL
1477266..1477802                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: antitermination protein Q; AV90_08100; phage(gi399528832)     1e-06               MIYPTNTGKSGEHLRLSTLESVWIQGKLRMWGRWSYIGGGKTGNMFNQLLASKKLTKTAINDALRRMKKAGLEKPELEVFLREMINGKQKSWLAHCTDTEALIIDRVVGEVLTDHPGLLGILNQRYVGRGMSKRRMAELLNEQYPEWALITCRRRVEQWLSIAEFILYSPMRKAFDYA
1479973..1480368                   PHAGE_Entero_P1_NC_005856: TciA; AV90_08105; phage(gi46401694)                       7e-48               MLGIFRKKTRKAIVEVKKMENRDAVEATVWGAYSIAYADGTCDAKEIAVLEKTIAALPAFAPFSGEIAQMSANIRARYEASPRSANAQALRELADVAGTAEAVDVLCLYWPRSCPALLTTTVNRWMRCVQW
1480468..1480749                   PHAGE_Entero_phiP27_NC_003356: putative holin; AV90_08115; phage(gi18249893)         1e-20               MESNLTGTLNAGLCLVTVLALFLYRRNGARYKPGIAWLSYLLMLGYALVPFRFLAGHYPSSSWPVVLMNALFCGLVLWARGNVSKILSLLRLR
1480746..1481291                   PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; AV90_08120; phage(gi422935930)         2e-68               MKPKDEIFDEILGKEGGYVNHPDDKGGPTKWGITEKVARAHGYRGDMRNLTRGQALEILETDYWYGPRFDRVAKASPDVAAELCDTGVNMGPSVAAKMLQRWLNVFNQGGRLYPDMDTDGRIGPRTLNALRVYLEKRGKDGERVLLVALNCTQGERYLELAEKREADESFVYGWMKERVLI
1481315..1481497                   hypothetical protein; AV90_08125                                                     N/A                 MPRMAAKWALVAILVPFLLVGCASLDKARQIFEAAGQSRSERLLGLKSKSPVVADNWGFL
1481585..1481596                   attR                                                                                 N/A                 AAATGGGGCAAA
complement(1481833..1481973)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AV90_08130; phage(gi18249865)     2e-12               MTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
1481992..1482144                   multidrug transporter; AV90_08135                                                    N/A                 MSRMVRITATNASTFLWQDTQWFKSVFILSSVLLKISSRPEKYWNEEMYD
1482137..1482475                   PHAGE_Acinet_ZZ1_NC_018087: putative quaternary ammonium compound-resistance protein qacE; AV90_08140; phage(gi392973036)     3e-13               MTKEAVIFLFIAIVVEVIATISLKLSDSFTRLVPSLVTIIGYCIAFWCLTIPMRTIPAGIIYAIWSGVGIVLIGLIGWLFLGQKLDMPAIIGMLLIICGVIVINLFSKSVSH
