gi|00000000|ref|CP007417.2|  Salmonella enterica subsp. enterica serovar Enteritidis str. 4685793, gc%: 51.73%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1011929..1013131)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; AU73_05235; phage(gi100242)     1.40e-49            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS
1013277..1013291                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1013326..1013736)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; AU73_25335; phage(gi169257271)     1.46e-44            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
1013757..1014386                   hypothetical protein; AU73_05255                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MYGVQGTPDCYRIELKNVYGVQENLISYRQASLGAWVAIAGGGDPYEVAYAIYKAVPDISVLTNDVVNPSGAAVDKKTIPIIVYPDTYHVPFVVPSSQNVTLLITWNTASTSYIDPTGIEKAVQQSIADYINGIATGEPINIFLIRDIFLNQVKGLVSSNLVSMIDIQVGINGKIVPPATDSSLVYGDTYAYFSTSSSQIQVKQYGSSS
1014370..1014996                   hypothetical protein; AU73_05260                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MAALLESIIPAYPYTQYNDDPDIVAFFDAYNKLAQGYLDYFNNLNLPCWTSPAITGELLDWIAAGIYGESRPLLQISEDAIARGAYNTIEYNNVAYAKLRNYVPGSASYVPDDYFKRILTWNFYKGDGSHFCINWFKRRLARFIHGANGIDPPVQSTFDISVMPDKGIFFVSIPDYGDGVGHFLKDAIDQSLVKLPFIYTYSVTVVEQ
1014993..1016702                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AU73_05265; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MIIGFGNNVVSSLAADITASQTTIQVMPGVGAMFANLLTSDYANSSNPLKTYAKITLTDAKETVFEVCHLTAVNNDMLTVIRGQEGTTAKGWSLNDVIANFATRGSENQFVQIEELQSGHYVAGVAGGTENNLTLELPATYFVNGGVDWTLRTPLVVIPALNNTGASTLQLTMGGRVLGIFPLYKGNKAELSANDIIKDIPVLCVLDNTKTYFSVLNPLEIYLGSRYLQKDQNLSDVPDKAKGRSSLEVYSKTESDENYMAKSQCGADIPNKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQVTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1016702..1017283                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AU73_05270; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
1017761..1018729                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; AU73_05280; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
1018997..1019245                   PHAGE_Stx2_c_1717_NC_011357: transposase; AU73_05290; phage(gi209447153)             2.73e-30            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MEIDNNICENALRCVALGRRNYLFFGSDRSGEAAAIIYSLLGTCKLNGVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(1019377..1020003)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; AU73_05295; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(1020187..1020366)       hypothetical protein; AU73_05300                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MIVNLYQDNYSGYRQHGGSGVGGSNPLVPTKIPLKNQPVRAVFFMAQFPTGKLWGETGE
complement(1020363..1021049)       virulence protein; AU73_05305                                                        N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(1021320..1021511)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; AU73_05310; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
1021817..1021831                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 2 ####
1226298..1226309                   attL                                                                                 N/A                 CTTATGATCAAT
1226335..1226371                   attL                                                                                 N/A                 CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA
complement(1226416..1227495)       PHAGE_Entero_HK022_NC_002166: integrase; AU73_25375; phage(gi9634144)                2.82e-93            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MSRKKYDANLPRNLTYRKASKSFFWRNPLTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRGNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
complement(1227470..1227748)       excisionase; AU73_06560                                                              N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MTMSFVRLETWGELNYPDDPPPLTTLRRWARNGNIYPTPVLHGRTYRVDPDAFYIKPNKVGLVLEQHHPNGRTGKPSALLEKLISESKKVRC
1228162..1230141                   hypothetical protein; AU73_06565                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MRLKLIVKSFALAGLLSSTALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAHKGFIAGLPEEVIKGEQGNVIWNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTDGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKAGMDLYFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPDASGQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLRGAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLPDSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKADFDQGNYRWVAQVVSKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHINGEKAGNARAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATITLNRDTLNKIILKEETLKQAQDKGEVNVTGNAAKLDEMLGYMDKFEFWFNIVTP
complement(1230159..1230350)       hypothetical protein; AU73_06570                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MNHATTSYCHLMKKAVHNRIRTDWYQGHVLQQQIHKMKQDIKNEGKIEYKKRTELSEVTSLQH
1230773..1231078                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; AU73_06575; phage(gi423262436)     1.24e-10            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MMIINSLLYIHVENEDALKMLKFVIYGDTVKNLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDTLINELTIRAGYHE
1231142..1231741                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AU73_06580; phage(gi169257286)     2.14e-70            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWMPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTEHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
1231738..1231965                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; AU73_06585; phage(gi169257288)                  3.59e-12            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MKMTWFQHPVCTTEEADELVAGYRRRGVKVERYGEAEVLELESNNTPQRWTVEELKEIRIAALADLRALKKLEAA
1232095..1232784                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; AU73_06595; phage(gi169257244)     5.53e-112           SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MNTQYLEYVRQQLIVATADLSGATKGQLQAWLENAQLYTKNYPRKKQRIRDEVTGKMITLNNPPIAGKQSLAKGSAIPLVQPVEYSTSSWRRALLSLEEHNKAWLLWNYSENTCWEYQVTVTRWAWEKFSQQLEGKRVAKKTLARLRQLIWLAAQDVKAELARRETYEYQTLAELMGVAKSTWTETYMSHWLVMRNSFKRLDSDALISVTRSRSQQKATNLDISLAKPN
1232881..1233405                   hypothetical protein; AU73_06600                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MFYRDLFQVFGPDPLYKEEEGIAILREQYGIEAPEQIFKQIYCGLSNNSEFQTLYGHLNLKSLKWDLVRLKTAEFTKFGRNATYPDYMLEISEDFNACGSKFCIDAREEVANHWLKFGTWAEPPMFIERSLIIPGESGLHLMEGHTRLGTLLGAIKYKFVQLADTHELYIASQK
complement(1233779..1234228)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AU73_06605; phage(gi169257293)     1.10e-105           SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENSLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1234589..1235275)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; AU73_06610; phage(gi169257294)     6.16e-169           SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELRDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1235545..1235880                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; AU73_06615; phage(gi169257295)     2.16e-75            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MKMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1235867..1236316                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; AU73_06620; phage(gi169257296)     3.42e-106           SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1236334..1236813                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; AU73_06625; phage(gi169257297)     6.25e-115           SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
1237021..1237332                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AU73_06630; phage(gi169257298)     2.12e-70            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395VDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSV
1237412..1237591                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; AU73_06640; phage(gi169257312)     1.66e-35            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1237708..1238241)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; AU73_06645; phage(gi169257313)     6.02e-125           SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1238331..1239026                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; AU73_06650; phage(gi169257314)     9.41e-173           SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPGADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1239036..1239317                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; AU73_25380; phage(gi169257315)     3.30e-58            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGTVCRAC
1239296..1242530                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; AU73_25385; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395NGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETMDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAIEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKNPDGGRQQTATIFEGVAGRRMERHVGRQNRADQRRQILCGRTWTEHGRHAREDKPVPGGGGSHCLYPGKRKRDARIRHAGRPDNHEGVPEIPERADHYQWRESSGIFPDAGWKADCEKCGYQRPYQRCIWLVYGRNQCHLRVFWRDRSKRVCRYLRLKSHAGREHQGDERRTQHLNTVYRQRHLSDRENHHGDGLARWHRCHHRHDKYRPGENGGGYAVYRRDSGHVSDRRLFGLHHFTCRGYQRLSEGPWAVHHVCFRLAAGDGFPVGEQLHKLA
1242652..1242879                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AU73_06675; phage(gi169257321)     5.51e-41            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGLATDDEKAQLDEWKKYRVLVNRVDTLNPDWPEKPS
complement(1243081..1243803)       type III secretion protein SopE2; AU73_06680                                         N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKNDVFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIQNTP
1244013..1244254                   PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; AU73_06685; phage(gi169936026)         7.96e-15            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395EMERELIVERTSAGLAAAREQGQIGGRRPKLTTEQWAQPGASLGPEYRDSRRLFMMLAFRRCTENFRRVTCLCHSWENAA
complement(1244283..1245083)       hypothetical protein; AU73_06690                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MIINVGHVATEKFDTTGVSACNNQQSTSVDLSSCIINAASECTVFVRTIIKKSDSYDAMQIDRLKIDTQEKYDALNLQREHHKKFLQTIKANSFDRAMAERPENPISLSLIYSSIDSIKYNTGNCADMSLILGAIIAKYIPQRLTGIGFSKNNVFDARISTSLMYNSASGGNHVVVFLTFTDSKGISEYILDPWLDARIFKKEESYEIYKNNSSEYINENHCFEAYDKYTAIMNSAEYIDAITKTINLLYRVNLDEIQLTNPFKFI
1245956..1245992                   attR                                                                                 N/A                 CGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACA
complement(1246028..1246297)       PHAGE_Entero_HK022_NC_002166: integrase; AU73_06695; phage(gi9634144)                3.53e-15            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MISAGIRKNSPTGNIHPDGLTKKFVKARKISDVKCSDNPPTFHEIRSLLGRLYKDERGEEFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(1246312..1246881)       PHAGE_Entero_HK022_NC_002166: integrase; AU73_06700; phage(gi9634144)                1.88e-47            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEMILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRTAAEYLPVWFPLAMDLALVTGQRREDIVNMKFSDIVDGRLHVTQIKTGMKIAFPLSLTLQAPGLRPGRLSIAADW
complement(1246941..1247594)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; AU73_06705; phage(gi169257272)     1.20e-15            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKPQPTGELADEPATPEAVEQDTTEHHPAPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVHNNYSASNQGEKEEVVQEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
1247625..1247855                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; AU73_06710; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1247909..1248442                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AU73_06715; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1248699..1248866)       lytic enzyme; AU73_06720                                                             N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1248931..1249119)       hypothetical protein; AU73_25390                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKYEQLSTTTT
1249174..1249665                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; AU73_06725; phage(gi169257298)     2.41e-35            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MDGELKNLKCNICQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMETPVSQAAEHQGPNKMTPKERKNWFDSEKGRFWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWSDKLERDKGWSADQLNEAQDVVDEARILLVKAIQETADDDGE
1249652..1249831                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; AU73_06730; phage(gi169257185)     6.07e-29            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGIKQFMFVPRGANTAVPWDDTLASQSFPK
1249851..1250225                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; AU73_06735; phage(gi169257299)     3.62e-69            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MFRDGSFLQIGWPSITVFSSSDYKRVALTDYDRFPEDIDGEGDGFSLASKRTTTFMSAGMTPAESSPGREITDVKWRRSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGDWFQSAMENMVGYG
1250218..1250814                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AU73_06740; phage(gi169257320)     5.26e-120           SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MGEVQTKAPLDSLALTGTPTAPMPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYVGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEY
1251135..1251821                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AU73_25395; phage(gi16765208)     1.98e-90            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MDGNKSHSYTARAQDIDLGTKTTSSFDYGTKSTNTTGNHTNQFGGYINSYWGDSNHTSFQLGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVVADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPDSVARQIVLI
1252034..1252270                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AU73_25400; phage(gi16765208)     9.15e-47            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MNDEAAEAAARLREAEGTKNRLLQITSEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1252367..1252567)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; AU73_25405; phage(gi169257211)     1.14e-41            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MKHVKSVFLAMVLILPSSLYSALTIAADSQDHKKEETIKPIPQKWCTLWPAGIPFPEDWFKMCRGY
1257413..1257424                   attR                                                                                 N/A                 CTTATGATCAAT

#### region 3 ####
1466619..1466631                   attL                                                                                 N/A                 CTTTTTTGAATTA
1466956..1468329                   PHAGE_Entero_CAjan_NC_028776: helicase-like protein; AU73_07990; phage(gi971742387)     3.74e-06            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQPASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPSLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
complement(1468373..1469308)       tRNA 2-thiocytidine(32) synthetase TtcA; AU73_07995                                  N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MQEIQKNTKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIVRFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVDGGDLAFDREEIPLQPAGWQPEEDDTALEALRLDVIEVK
complement(1469360..1469644)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AU73_25490; phage(gi18249865)     2.93e-32            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395FMPRMSKGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
complement(1469625..1470242)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; AU73_08010; phage(gi985761253)     1.22e-47            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MSDNKTEYSYYIKVKNESARKRLGFPFAFWWKTESSEAAATARLAVSMLDAGFEPTDFAKPVRVNSPAVNELPPEGSFDTTFCQKYELGGEDGKTFMLIPGTPATDAHDEKTEECADDAGTEESGTDTSDNDECQDCEVSVATLPFPQRVLHIFTYAATDKKYLHHATRAQRRHITVLEMEQENSYIQNLLMVLRKSEQVHAQDE
complement(1470270..1470587)       hypothetical protein; AU73_08015                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MKNVPESVIAELRQLSGKIRTLCIENNMPCVVSYARDCDDESVSRTLVAYTDSETGAYDRSITAAIMLLKMNEAPPENFISLLKLMECKELVTNAFCSMKNESLH
complement(1470672..1470893)       PHAGE_Shigel_Stx_NC_029120: Kil protein; AU73_08020; phage(gi985761255)              1.16e-40            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MIAHHFGTDEIPRQCITPGDYVIHDGRTYIASANNIKKRRLYIRDLTTQRCITDCMVKVWLNRNGLPAKAESW
1471331..1471852                   hypothetical protein; AU73_08030                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MSETALVIVKFLIGKSVGQFMLTVALFFLIIIFIPRDITELIEARSDLPYAVQIFSFAVAYLIVLILKVTGYFFVSALPLCQRRGRAKRMLKTLNSLSTEQLFLLEPFLKTHSPTFRASWDNPDADALVKAGIVRPAGSCIDGVSVMFKIEPEYESLMLSTWNPCTKRFDISR
complement(1471960..1472124)       PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; AU73_25495; phage(gi472340166)     7.43e-11            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MDKLQKIHLGNNESLVCGVFPNQDGTFTAMTYTRSRTFKTETGARRWLERNSGE
complement(1472500..1472967)       PHAGE_Pseudo_F116_NC_006552: transcriptional regulator; AU73_08050; phage(gi56692918)     1.40e-10            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MRKKREEIAPPEATQRLRAIWDAKKRDLKLTQEIAADLMGFETQSTVSHYLNGKAPLNTDAALKFSVLLRVKPEELRPDLADLMNYVRSSGTYDDNFEGGGWRMVSRQQADLLNLFDILPESEKEKLIDRLKGQNELXKEAXQNMLAAQKRLKNQ
1473240..1473569                   PHAGE_Shigel_Stx_NC_029120: LygF; AU73_08060; phage(gi985761265)                     4.59e-22            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MNSGLITLTELRRMTGLTIYSTRHYLDKAERCGDVYQAGRRGGIFPSEEAYRAWKKQAKVDADLIWKLPDGEVRRYDRHHNVICRECRKSEYMQRVLAFYRGNFQEVLL
complement(1473731..1474285)       hypothetical protein; AU73_08065                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MNKINVLGVIIKHYKTMSDQRGTMLMSDITVHFIVPLSLSFVLCWTYGIMKPAIASVFVNFGAITTALLMSAVIMIYEQKQKTITKISDIIEGNKSRDKLISLNTNKTIYEQLCHNVAYAILTSIVLVIFSVIIYFLPDNAVDLMKWYFRAPAYIVSFLAYTSFFITVITFLMVIKRFSTILDN
complement(1474282..1475214)       hypothetical protein; AU73_08070                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MHSVNFYSFRVLTHKGSRASKKLNDLGLSNKKTAYELFVDYFTLYKNTPIEFGVSKTKISLEQHTKLHFDNTKKIIYGYIKVGKYGESSEIKDVKLKKVHYRTTAYDVTLKERYILIYLPDNLEEGIIAFHSCDNISARGVLSDSITEYLKKQFQLEARINPLHHKKIPQYILNSELKQIKAQGYKAPEDIADSFGKNKTNIKTDLIIKANDGIFGSFRDLRNKNIGNIIEIIEDKCDAIKVSLQLGSRTVVFNYDTILKKGISAELDDNDLKIDPLTGIPDLTALHDTIKNLSNDILEELHCGNKGVII
complement(1475395..1475539)       hypothetical protein; AU73_25500                                                     N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MLTGAFLYLPFGVHAGRPQAPATILLNSPFPANRFYPQRKFYQYPLA
1475584..1475796                   PHAGE_Entero_933W_NC_000924: protein MokW; AU73_08075; phage(gi9632542)              2.64e-39            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MLCTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
1476320..1476919                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; AU73_08085; phage(gi435439315)     1.47e-71            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MAHLQLVKQTSSGLLLPATPESEDFLRSVKIGAWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPIGGAILPQEQELITGFVDFLCESAAQGHSPALSDAAEQYLHKVAVNRTLDVALLKSFDAFREWVTIQAGFYTEHYYPDGSRGRRAKSIAFANMDETEFQQVYKAVLNVLWNWILFRKFSSPEEVENVAAQLLEFA
1476919..1477209                   PHAGE_Shigel_Stx_NC_029120: hypothetical protein; AU73_08090; phage(gi985761275)     1.41e-30            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MADLRKAARGLMCTVRIPGHCNHNPETSVLAHYRLAGTCGTATKPNDMQAAIACSSCHDIVDGRVKIDDFTKTEIRLMHAEGVFRTQEIWREKGIL
1477206..1477742                   PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; AU73_08095; phage(gi100055)       6.94e-07            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MIYPTNTGKSGEHLRLSTLESVWIQGKLRMWGRWSYIGGGKTGNMFNQLLASKKLTKTAINDALRRMKKAGLEKPELEVFLREMINGKQKSWLAHCTDTEALIIDRVVGEVLTDHPGLLGILNQRYVGRGMSKRRMAELLNEQYPEWALITCRRRVEQWLSIAEFILYSPMRKAFDYA
1478767..1478779                   attR                                                                                 N/A                 CTTTTTTGAATTA
1479113..1479124                   attL                                                                                 N/A                 CAATTTTTTTAC
1479913..1480308                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AU73_08100; phage(gi100118)       1.12e-62            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MLGIFRKKTRKAIVEVKKMENRDAVEATVWGAYSIAYADGTCDAKEIAVLEKTIAALPAFAPFSGEIAQMSANIRARYEASPRSANAQALRELADVAGTAEAVDVLCLYWPRSCPALLTTTVNRWMRCVQW
1480408..1480689                   PHAGE_Entero_phiP27_NC_003356: putative holin; AU73_08110; phage(gi18249893)         2.47e-24            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MESNLTGTLNAGLCLVTVLALFLYRRNGARYKPGIAWLSYLLMLGYALVPFRFLAGHYPSSSWPVVLMNALFCGLVLWARGNVSKILSLLRLR
1480686..1481231                   PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; AU73_08115; phage(gi422935930)         1.04e-86            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MKPKDEIFDEILGKEGGYVNHPDDKGGPTKWGITEKVARAHGYRGDMRNLTRGQALEILETDYWYGPRFDRVAKASPDVAAELCDTGVNMGPSVAAKMLQRWLNVFNQGGRLYPDMDTDGRIGPRTLNALRVYLEKRGKDGERVLLVALNCTQGERYLELAEKREADESFVYGWMKERVLI
complement(1481773..1481913)       PHAGE_Entero_phiP27_NC_003356: putative integrase; AU73_08125; phage(gi18249865)     6.30e-16            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
1481932..1482084                   multidrug transporter; AU73_08130                                                    N/A                 SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MSRMVRITATNASTFLWQDTQWFKSVFILSSVLLKISSRPEKYWNEEMYD
1482077..1482415                   PHAGE_Acinet_ZZ1_NC_018087: putative quaternary ammonium compound-resistance protein qacE; AU73_08135; phage(gi392973036)     3.10e-13            SalmonellaentericasubspentericaserovarEnteritidisstrSA20123395MTKEAVIFLFIAIVVEVIATISLKLSDSFTRLVPSLVTIIGYCIAFWCLTIPMRTIPAGIIYAIWSGVGIVLIGLIGWLFLGQKLDMPAIIGMLLIICGVIVINLFSKSVSH
1492411..1492422                   attR                                                                                 N/A                 CAATTTTTTTAC
