gi|00000000|ref|CP007500.1|  Staphylococcus aureus strain 2395 USA500 plasmid pUSA500, complete 32406, gc%: 29.49%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
4378..4393                         attL                                                                                 N/A                 TATAGTATCAAGACAA
4503..4515                         attL                                                                                 N/A                 TGTTGCAAAGTTA
4556..5230                         PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; CH51_14475; phage(gi985761246)     3.41e-138           MNYFRYKQFDKDVITVAVGYYLRYALSYRDISEILREQGIYVHHSTIYRWVQEYAPILYQIWKKKNKQAYYKWHIDETYIKIKGQWHYLYRAIDADGHTLDISLRKKRDNHSAYTFIKRLIKQFGKPQMIITDQAPSTKVAMSKVIKDFKLTPNCHCTSKYLNNLIEQDHRHIKVRKISYQSINTAKNTIKGIECIYGLYKKNRRSLQIYGFSPCRVISIMLAS
complement(5265..5441)             membrane protein; CH51_14480                                                         N/A                 MYKNFDLFLGIVSLLSAIIIYIIDSDSKGIALVVLIMGIVFILTSMIRKKGFCCKVKK
complement(5463..5834)             bacteriocin transporter; CH51_14485                                                  N/A                 MGIIKGNIKTGGIKELHAKRLVSLLKSNKKYYLYIGFQECPYCRDFSETLREFSSNANLPIYYFNLNSGNSKLNESDKKFIEKVLNESVNLRGTPTFLKIEKKKIIAKFEGSQTTIRDLNDIN
5979..5991                         attR                                                                                 N/A                 TGTTGCAAAGTTA
complement(6034..6696)             PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; CH51_14490; phage(gi985761246)     6.61e-133           MNYFRYKQFDKDVITVAVGYYLRYALSYRDISEILRERGIYVHHSTIYRWVQEYAPILYQIWKKKNKQAYYKWHIDETYIKIKGQWHYLYRAIDADGHTLDISLRKKRDNHSAYTFIKQFGKPQMIIIDQAPSTKVAMSKVIKDFKLTPNCHCTSKYLNNLIEQDHRHIKVRKISYQSINTAKNTIKGIECIYGLYKKNRRSLQIYGFSPCRVISIMLAS
complement(6736..6855)             replication protein; CH51_14495                                                      N/A                 MQYNTTRYIDENQDNKTLKDMMKNGKQRPWREKKVLLQS
7008..7023                         attR                                                                                 N/A                 TATAGTATCAAGACAA
complement(7046..7393)             ArsR family transcriptional regulator; CH51_14500                                    N/A                 MSYENTCDVICVHEDKVNNALSFLEDDKSKKLLNILEKICDEKKLKIILSLIKEDELCVCDISLILKMSVASTSHHLRLLYKNEVLDFYKDGKMAYYFIKDDEIREFFFKNHEGF
complement(7412..8029)             cadmium transporter; CH51_14505                                                      N/A                 MIQTVVAAAVLYIATAFDLLVILLIFFARAKTKKEYRDIYIGQYLGSIILILVSLFLAFVLNYVPEKWILGLLGLIPIYLGIKVAIYGDCEGEKRAKKELNEKGLSKLVGTVAIVTIASCGADNIGLFVPYFVTLSVTNLLLTLFVFLILIFFLVFTAQKLANIPGIGEIVEKFSRWIMAIIYIALGLFIIIENDTIQTILGFIF
10322..10333                       attL                                                                                 N/A                 TAATAAATATAA
11097..11873                       replication-associated protein; CH51_14515                                           N/A                 MLXKTIKMVADELNVTKQTIVNNAKNLNISFKKENGINYINDNDCLKIIEKITKKERTMQNKESIKKERFNENTAEFEKHIYNNSNGFESXKTKVNELEKQIEIFETRAKNDEKYIENLTKQLDQQNSNVNTLNKLLENQQILALESNKKIQKLENQLEEERQLNYSFDTATNDRQSINPQEATFTEEYQNSNQQQKKIQPIEAELNHKGITKAKKDDSSNEDVLKRDDKLSEEIESGPEDREVETPKKGFWSRLFGS
complement(12477..12890)           universal stress protein; CH51_14520                                                 N/A                 MYKSILLAADGSENSLRSAKEVLNFIDDNTIVTILTVVDVEESKTDVLHGKQSSSLTNEREDKLSHITELFVEHNVKYEMKIAHGVPADTVVSVANSGEFQAIVLGTRGLNSLQEMVLGSVSHKVAKRSEIPVVIVK
complement(12904..14355)           sulfate transporter; CH51_14525                                                      N/A                 MVEKLKNEWLNQPGKNILAGIVVALALIPEAIAFSIIAGVDPMVGLYTSFIIAVVTAIVGGRAAMISGATGAIALLIVPLVKDYGVEYLLAATILMGLIQLILGLLKVGRLMKFIPRSVMIGFVNALGIMIFMSQIEHIFGISISTYIYVIVTLLIVYIIPRFFKAIPAPLIAIIVLTALYMYTGSDVRTVGDLGNIKQAFPHFLIPNVPFNLETLQIIFPYSLSMAIVGLVESLLTAKIVDDATDTYSSKNRESCGQGIANMITGLFGGMGGCAMIGQSVINVKSGANSRLSTFTAGIVLIFMIIVLGGLVVQVPMPILAGIMVMVSIGTFDWNSFKYIKKAPKTDAVVMLITVIIVLMTHNLALGVVAGVVFSALFFATKISKVEVISEEFGKINRLSFKGQIFFVSIDSMMEQINFEIENSTIELNFNNAHLWDDSAVDAIDTIVRKFEEKNNIVRIEKLNSDSHKVVSELSQLNENHLN
14469..15011                       PHAGE_Ralsto_RSM3_NC_011399: hypothetical protein; CH51_14530; phage(gi209901327)     9.06e-09            MKYGYIRPVTINDDLNEQKKKIETHTNEIVEEIHANNKKRNILDVLLNEKLVPGDMLYVTDLCILADSTKHLVDILDYLSQEDISLYVINLNRYIYKDIKGEFIEILHDITDFQSDIVKFRTRVGLENYSKDGKTLGRPKRDDKNLRDAIEMYMSKKYTLDEIKEQTNISRATLYRHLDK
15025..15210                       hypothetical protein; CH51_14535                                                     N/A                 MLQDIVYKVLLSIREENSVDFKTLDVSEKPFLLALESVAGEDLAQKISKFQITIHKRLFVL
complement(15213..15821)           PHAGE_Clostr_vB_CpeS_CP51_NC_021325: putative resolvase; CH51_14540; phage(gi509140089)     1.89e-24            MIVGYARVSSIEQNLERQLENLKTFGAEKIFIEKQSGKSIENRPILQEALNFVRMGDRFIVESIDRLGRNYDEVIHTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIKIAKEKGVYKGRPLLYSPNAKNPHKRIVYHRVIELLNKGESISKIAKDVGITRQTIYRIKRERTEH
16824..17996                       PHAGE_Staphy_SPbeta_like_NC_029119: transposase mutator family; CH51_14550; phage(gi985761243)     0.0                 MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKEYERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNEKALMASMLEMYVSGVSTRKVSKXVEELCGKSVSKSFVSSLTEQLEPMVNEWQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHDYIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRREKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
complement(18126..19565)           PHAGE_Staphy_SPbeta_like_NC_029119: bifunctional AAC/APH; CH51_14555; phage(gi985761240)     0.0                 MNIVENEICIRTLIDDDFPLMLKWLTDERVLEFYGGRDKKYTLESLKKHYTEPWEDEVFRVIIEYNNVPIGYGQIYKMYDELYTDYHYPKTDEIVYGMDQFIGEPNYWSKGIGTRYIKLIFEFLKKERNANAVILDPHKNNPRAIRAYQKSGFRIIEDLPEHELHEGKKEDCYLMEYRYDDNATNVKAMKYLIEHYFDNFKVDSIEIIGSGYDSVAYLVNNEYIFKTKFSTNKKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYILLRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNIDIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEIYKRTYKD
complement(19566..19970)           PHAGE_Staphy_SPbeta_like_NC_029119: ribosomal-protein-alanine N-acetyltransferase; CH51_14560; phage(gi985761241)     5.82e-94            MTEFMEEVLIDDNMVFDIDNLKGFLNDTSSFGFIAKENNKIIGFAYCYTLLRPDGKTMFYLHSIGMLPNYQDKGYGSKLLSFIKEYSKEIGCSEMFLITDKGNPRACHVYEKLGGKNDYKDEIVYVYDYEKGDK
complement(20015..21187)           PHAGE_Staphy_SPbeta_like_NC_029119: transposase mutator family; CH51_14565; phage(gi985761243)     0.0                 MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKEYERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNEKALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNEWQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHDYIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRREKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
21250..22128                       hypothetical protein; CH51_14570                                                     N/A                 MAFLLLHNYTDFIKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKNKLESREEKRKEIYQSAKDVYLTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVLLEDTYKKASKDIFFSERHLKRLEKDSFEYNAELQFIKEKEKEIESYKEHIDDDLRIDIGDRSFEKVKGQTPNEKVQLLIKLEKYNNIDQEKVIEKHINQVDRNNNDNHLEHEYEQSNHIHLPKINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR
22407..22649                       hypothetical protein; CH51_14575                                                     N/A                 MFSICLSVISIIIAIVSLISSIRSRIYQKTKDNKLLRPQLLLEAQKKQATDYIGIDFEIEGYEKLKDYNVLLKFFGSVAK
complement(22690..23364)           PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; CH51_14580; phage(gi985761246)     5.53e-166           MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRGRGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS
23478..24434                       PHAGE_Staphy_SPbeta_like_NC_029119: thymidylate synthase; CH51_14585; phage(gi985761245)     0.0                 MYNPFDEAYHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYVQSDDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKFKERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKTNPNSRRHIVSAWNPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECGLEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTDKSIFDINYEDLELINYESHPAIKAPIAV
24476..24961                       PHAGE_Staphy_SPbeta_like_NC_029119: dihydrofolate reductase type 1; CH51_14590; phage(gi985761244)     1.20e-117           MTLSIIVAHDKQRVIGYQNQLPWHLPNDLKHIKQLTTGNTLVMARKTFNSIGKPLPNRRNVVLTNQASFHHEGVDVINSLDEIKELSGHVFIFGGQTLYEAMIDQVDDMYITVIDGKFQGDTFFPPYTFENWEVESSVEGQLDEKNTIPHTFLHLVRRKGK
24971..25393                       PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; CH51_14595; phage(gi985761237)     5.50e-92            MAKQIIVTDSTSDLSHEYLKQHNIHVIPLSLTIDGKSYTDQVDISSSEYIDHIENDADVKTSQPPIGRFIETYEQLAQDDVEIISIHLSSGLSGTYNTAVQASHMVDGNITVIDSKSISFGLGYQIKQIVELVLLQSKKI
complement(25425..26099)           PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; CH51_14600; phage(gi985761236)     5.53e-166           MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRGRGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMVKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS
29342..29353                       attR                                                                                 N/A                 TAATAAATATAA
