gi|00000000|ref|NC_000000|  Vibrio cholerae strain 2012EL-2176 chromosome 2, complete sequence. [asmbl_id: NC_000000].1047617, gc%: 47.02%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
436113..436127                     attL                                                                                 N/A                 TATGAATTGCATCTC
436180..437547                     PROPHAGE_Xantho_306: integrase; EN18_02295; phage(gi21242250)                        4.26e-06            MTHQENLSNPQEVNKKVTKRSHYDSLSLSVFSSNPINPDCRNGINPHIRDTQKIYFTTLKKHNTFYLRVSQRAKQAQRAKQAHREHLKNESVTVSLRTESRREAKMRSDYLKDRLLEQAGSFIDFNHMRETSKAELLRRPKVDWFYRGNIIVAQEALQEAQTVEQVRFIQSYSDIMKKGLQSDTEGLLSIIDSVDSEQSKHSEPQDHKEHKEHKESLTIDELIDNYIADKISSGEWMESTKEKKGAKLQHLKTIFEACSLKDKPIDKLTRNDLLEVRTALINRGLKTLTVNGYMQDIRAIFNNAEALGLIGKSPAVKLNIKDRDIKEPKALTESEVIALIDYFKHGYFTEARRSKKTLEGMKYLKWVPQIAAVTGARLNEILQLRKGDIRQSANGLCWYIDINDRGDNVVKNKSSNRIVPLVDGAYGFDLELFLSEIVNTCNEDSDNIFRLVVVN
complement(437540..438412)         PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; EN18_02300; phage(gi41057343)     2.35e-145           MIIKKLKQSHSVKILCEVFNVHRSSYHYWLKRPALINAETIKLRSLISEAHAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRKASQEHIDVPNHLSRQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFARKVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHYTSRKYRQLLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEITRYIIGYYCQLRPHQYNGGLTPNESERLYWENSKTVANFS
complement(438409..438717)         PROPHAGE_Xantho_33913: ISxac3 transposase; EN18_02305; phage(gi21231087)             2.94e-08            MTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAMNVGKSTMDKWVRQLREERQGKTPKASPMTPEQIEIRELKKKLARLEEHNEILKKATALLMSDSLNNS
438830..439312                     PHAGE_Shewan_1/40_NC_025470: Rha-like protein; EN18_02310; phage(gi722121079)        8.19e-05            MNKKEIQAYQSAFEKFNPFYGVDFPITSVKLCELINKMRNDHNEKVVELRHDHLMNKIREFSEQVNAPNFRVVESSYKDTKGEDRKCYLLGKTECRAIAATESKSVCYMIMVYLDQLEQIFEKAKEAKATEFDRKLSKQGVTWREACRTVGIEHPDLALK
439313..439606                     hypothetical protein; EN18_02315                                                     N/A                 MIKRGFFKRDFDGGLVVKPSLLADKSFKKADNLGINKEGFRVLTNGFKKLQEAAERIKWQCLQFSDRPKLQAMYKAKLEEHMKNQPKVYDEQGFEVE
439929..440777                     PHAGE_Ralsto_RSM3_NC_011399: hypothetical protein; EN18_02320; phage(gi209901327)     2.06e-21            MKYSLIKLSAMNSYSDCQQAIEDIEADPENYTTETRAAARIGGHCELLKGAKEKIKALEKKADSFIPSDDSEEVNTVSETSQRTYGYGRVSTDEQTTSQQLTAIREAGHKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKLEKGDTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATFAEFEKNRISERIRDKLKQLKQEGKALGRPTKNVYDDVQELKAQGISQRTIADKLNVSLSTVRRNWVDTKRSLEVVTESGQ
440858..440872                     attR                                                                                 N/A                 TATGAATTGCATCTC
441015..441236                     transcription initiation factor TFIIIB; EN18_02325                                   N/A                 MNNRLVEETIAEETIDCCPLCQHDEFFISADKEKFYCAKCGFHTNTLTSIQPMLAAKANLTHRFVHTGIKTRQ
complement(441432..442112)         HAD family hydrolase; EN18_02330                                                     N/A                 MTESRVKCVIFDCEGTLVDSERLCCEALVQVFGELGVALSYQQVAEHFSGGKIADILHAACQLAKITADIDLLEQRYRSIVAATFRRKLSPMGGARALLNYLKRNQIEFCVASNAPREKIAMTLTLAGLEHYFEGRIFSAFDANSWKPEPDLIRYCAMNMGFTLDECIYVDDTPKGVEAGLNAEVLTFQLSPLNPQHRSHSQQVIVLSNLLQLAEYLSGSVMRQSA
complement(442251..442757)         hypothetical protein; EN18_02335                                                     N/A                 MIYSPSPVVAAKNQWLSSQVDVEFPTAQSLEGRDIYHALSRHTEVSLFQPQACDAPLLQEIYLVDFHRLTVWFALLQATRSSTQHEQERLVEFFTQIIYSPPCQLFLGFHLGEPVAAGMVTEHEHMVLLSDLVVKPNPLFDTREAFAQALYAKWQAITASDATPYIEL
443079..443561                     PHAGE_Aeromo_phiAS5_NC_014636: hypothetical protein; EN18_02340; phage(gi310722759)     6.03e-09            MLNSIRTALLLSFAFVLSGCDRSEVGDVSLGMFTLKDIKINNLTDPVVTGVTCHVASIEADLSLADPSDSSISCRQTGEITPEMIAQIDKSSSGEVVFQKSKSIFFKSMKIRRIFDAKNQTLMYLSYSTKETSGSFKHSLSTVPLWGTQAYNAFPETQNK

#### region 2 ####
599635..600756                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; EN18_03005; phage(gi371496158)       8.54e-33            MASVTLKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDLYIGEQRMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAEILQLSHLLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKLQRKLGCTMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFIGSPKMNFMSVFIEGVEKDRVQVQLSNGTTFWIPVDGTTVTRGERMSLGIRPEHLVEAEHGDAKIEGKVMIVEKLGNETQVYMNLKGSDSDVIYRQPDTLDVETGDTLTIGIPAHRCHLFHSDGRACRRLHKEKGVDLPA
600979..601500                     PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; EN18_03010; phage(gi9630137)     2.10e-11            MNSQLTLRALERGDLRFIHNLNNNRNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQKNLIGLVELIEINYIHRSAEFQIIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGHLVEEFFINGRYQDVKRMYILQSKYLNRSE
601505..601750                     transcriptional regulator; EN18_03015                                                N/A                 MVSCSQYDYIELACLFHLPVKLTMKSGEVYYGVAADTQRNSQKQECIALRGEEETWLLETDQLSSMEALSEQPHFSVIHFK
complement(601888..602496)         PHAGE_Cyanop_P_TIM40_NC_028663: hypothetical protein; EN18_03020; phage(gi966198291)     1.19e-05            MALDGLMDAIADRGWYVWDDFLNPQEVQALRECIPERWKRAKIGRNEEIQRAADIRSDKIQWLDLSMGQPVQDYLERMEQIRCEVNRHFFLGLFEYEAHFAKYEAGDFYLKHLDSFRGNENRKLTTVFYLNENWTPADGGELKIYDLQDNWIETLAPVAGRLVVFLSERFPHEVLEAHADRVSIAGWFRTNGVSGNKLDIAN
602712..603032                     PHAGE_Rhodov_RS1_NC_020866: hypothetical protein; EN18_03025; phage(gi472342875)     3.81e-19            MIVTTTPNIEGKRIVRYCGVIAGEAILGANIFKDLFAGIRDIVGGRSGTYERELEKARAIALEELQQHAVALGANAVVGIDLDYETFGKANGMLMVSVSGTAVVVE
complement(603199..603873)         PHAGE_Altero_vB_AmaP_AD45_P1_NC_021532: hypothetical protein; EN18_03030; phage(gi514051613)     4.30e-06            MKDENKLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGIEEVNS
complement(604451..604729)         peptidylprolyl isomerase; EN18_03035                                                 N/A                 MARTAAALHILVKHKEQADDILAQLKKGAKFHVLAKKYSTCPSGKKGGDLGEFRQGQMVPAFDKACFQGEVLTPQLVKTKFGWHVVKVLYRT
604904..605824                     chemotaxis protein CheW; EN18_03040                                                  N/A                 MAKVVSKANQSQGMLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAAAIGFRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTGITRFQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQLSDALDSINIPYHICKNGSEALDLMRDMARDHRAIDILVSDIEMPGLDGYELAFEMQNDPQLNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAMLRGAKKLQTQRLQKS
complement(605900..606424)         MarR family transcriptional regulator; EN18_03045                                    N/A                 MDSVQKSVMEWANELPELNTLPMSVLHRLQRLARRIELKMEAFYQQAGLTAGEFEVLMTLRGVGHPYCLNPSDLQVRLLLSSGAMTNRLTRLERKGLVERNLSRYDRRNVEVTLTEAGRQRIELWLPEYCDLQSSLLAKFSEVEQETLSTQLQEWLSHHEQLWCIPDLLNSRQR
606596..607612                     PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; EN18_03050; phage(gi100150)      1.87e-18            MTTEDFKKSTANLKKVVPLMMKHHVAATPVNYALWYTYVDQAIPQLNAEMDSVLKNFGLCPPASGEHLYQQYIATKAETNINQLRANVEVLLGEISSSMSDTLSDTSSFANVIDKSFKDLERVEQDNLSIEEVMTVIRRLVSDSKDIRHSTNFLNNQLNAATLEISRLKEQLAKVQKDALFDSLSGLYNRRAFDGDMFTLIHAGQQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRVMPL
