gi|00000000|ref|CP007646.1|  Lactobacillus salivarius strain JCM1046, complete genome. 1836297, gc%: 33.12%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
374182..375660                     PHAGE_Strept_Str_PAP_1_NC_028666: helicase; LSJ_0341; phage(gi966198625)             9.99e-06            LactobacillussalivariusMKFGELGLDKSLLKAVKRSGFEEATPIQAETIPLVLAGNDVIGQAQTGTGKTAAFGLPVLQQLDLDLRQIQAVIISPTRELAIQTQEELFHLGKEKRAKVQVVYGGADIRRQIKQLEQHTPHILVGTPGRLLDHIQRGTINLAHVKHLILDEADEMLDMGFLDDIEKIIQAVPAERQTLLFSATMPKEILKIGEKFMVNPQIVKIKAKELTTDLVDQYFVKTKEFEKFDIMTRLIDVQAPELTIVFGRTKRRVDELSRGLEARGYNAAGIHGDLTQQRRMNVLRKFKNGDLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGHHGTSVTFVTPNEMDYLRVIEKLTKKRMDPLKPPTQDEAFIGQVSSALDDIKDLIADTDTERYEAQAQALLEQYDAVEVVAAFLNNMTKKDASDVPVKITPEKPLPRRKKGRRNGNYRRGNDNFKRSKRFNKHDRKNRDNKRRSGKKNRFTIRTKKA
375790..376197                     Holo-[acyl-carrier protein] synthase; LSJ_0342                                       N/A                 LactobacillussalivariusMIYGNGIDIQEIRKIQKAQEKRESFAKRILTVNELAIFEKYKGNRKYEFLAGRFSAKEAFSKAYGTGIGKKVGFQDIEILNDSQTGRPEIVKFPGDNKLQAKISISHSGEYVVTEVILEKLTWQTKMKKFLIKQK
376216..377331                     Alanine racemase; LSJ_0343                                                           N/A                 LactobacillussalivariusMVIGRHRNTRAIISLEAIKHNVATQISKLKDGQSLFAVVKANAYGHGMIPVAKAAKEAGANGFCVAIIDEGIALRESGIKDPILILGVNPASEAVCMAKHDLSVAVGTLEFLTEAQKLLQEEKQSLKIHLALDTGMGRIGFRNTEDLKEAVDFIEKYSDQLKCEGVFTHFSTADSKDPAYFEKQSQKFDELVGVLKKKPKYIHQANSATALWYPNFEGNLVRMGISMYGLNPSGDVIDETWNLEPALSLESELVAVKEVEAGSSIGYGAIYTSSQSEWIGTVPIGYADGWLRRMQGFKVLIDGQYCEIVGRVCMDQFMVRLPKKYDLGTKVTLIGENNGKVITAQDVANYADTIHYEIMCNITERVPRIYK
377378..377626                     Hypothetical protein; LSJ_0344                                                       N/A                 LactobacillussalivariusMIKKSVKAIIKDKNFVEYCSFYSVDSNEVVNDDSLMNHIQENQTSLEQLIAGYMEMGALNQEICGEFWNCECSSDHADELKE
377642..378010                     PHAGE_Clostr_c_st_NC_007581: PemK family transcriptional regulator; LSJ_0345; phage(gi80159713)     1.57e-14            LactobacillussalivariusMSDFEVKRGDIFFADLSPVVGSEQGGVRPVLIIQNNIGNKFSPTVIIAAITSKISKPKMPTHIGLVAKEVGLEKDSVVLLEQLRTIDKQRLKDKVTHIDEKLMQRVNNALKISVGLASIHKK
complement(378110..378442)         PROPHAGE_Staphy_N315: transposase; LSJ_0346c; phage(gi15927655)                      2.06e-12            LactobacillussalivariusMSSELKTAYEYYQLLLQMYRKNSCQLLNLLTDTSSWNLPPEMRQALKTIKKHKAEIENSFVLPKLTNGPIEGVNNHIKVIKRIAYGYNNFKHFRLRILISLKNNVIFFST
complement(378554..379399)         PROPHAGE_Staphy_N315: transposase; LSJ_0347c; phage(gi15927655)                      3.08e-37            LactobacillussalivariusMDNNIKLLLGITDPNLTIDPKYQYTSYIEEKIIKNSKALLCHLYLSYPMYCPNCKTLMLHNGTKVVNNVHLSSAGKKLVLSIRKQKYLCPECKKTATAKFKDTNYHDHFSNAVKAKLVRDLSLSRPMCEIAADSFTSSNTIIRSLESVENNFKVNRNWLPSHLSLDDFKSGKRFSSSGMSMCLINAVNHRIIDIIPERNNKFLRNYFIQYSYKARLSVMTITVDLYAPYRSLIKELFPNAFIIADKFHVVTQAYTAMNKIRIRVMKEYGAGTHEYRALKRF
complement(379567..380403)         hypothetical protein; LSJ_0348c                                                      N/A                 LactobacillussalivariusMITLGLTTWNEHPALIHNEDRPVTLSEYSAYFPTVELDTFFYGIPRISTVENWQTQVPESFQFVVKANKVLTLHKQSDIQHINLIFHNFLESLQPLIDKNQLKTVLFQFPPYFTLNKKSTNYLRYLRQKLPNISISLEFRHKSWYNDTKKLVNFCRELGFTLVIADEPSRLESSVPFLPVITNPNLTFFRLHGRNIEGWENPGKNWRAKRTLYRYSDDELLELKQVIQKLQSDTKEICVIFNNNSGKDAAPNALKLQEFLNITFDNLGPKPPEQLNFF
complement(380421..381512)         PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; LSJ_0349c; phage(gi100100)       1.60e-15            LactobacillussalivariusMVNKQHIKIFSHNDLDGFGAPVLLKTLQPYLFKNATFDLTTCSAGNLDRELSYWFRQPSLHQYTDVFIADMTPDSDYSFQQLEQHFPNHWLIFDHHESEEKLRQKYRQNCIIPTNTDINPSATSLVWDWVSQNVNFSNIPSKRQNDLRYLVELIRAYDTWDWKNDPNMDSDTRLAADELNQLFWFYPLSRSEMFVSEVFGTSWEQYRQNNSLLINTLNGRRQRYLDKHLKSVLTFKLDGHSFGIVYASDYKSEIAHALLKNHPVDAALVIDNRSISLRSNGKLDVASFSEKYFNGGGHSDSAGGTLEFNPVETGEQAVIDALKHQFEINKKLEKQEKEESSSTFADNLDPEMAAKLASLFNNN
complement(381526..381936)         PHAGE_Synech_ACG_2014f_NC_026927: prohead core and protease; LSJ_0350c; phage(gi100217)     2.34e-09            LactobacillussalivariusMIRDINHDVKILSKKSTPASKNDIAIVQDLVDTLTYHRDHCVGMAANMIGKNKCIIACQFGPLIVAMINPVITKKSQKYSTSEGCLSLTGERETTRFNEIEVSYLNQSFQKVHATFEGFNAQIIQHEIDHCNGILI

#### region 2 ####
1387889..1389118                   PHAGE_Strept_EJ_1_NC_005294: transferase; LSJ_1357; phage(gi39653711)                5.34e-78            LactobacillussalivariusMQIIKQKINKLVPADYNPRKNLKPGDFEYEKLKRSIHEFGYVDPIIWNKQTGHVIGGHQRLKILQDEGLNEVDCVVVDFDEAKEKALNIALNKISGDWDQAKLGLLISDLEASAFDVSLTGFDESEIADLLETDSDTKDDDFDVDGELKQPTFSRAGDIWHLGRHTLLCGDATKAESYQKLLGKTQVNLVLTDPPYNVDYQSKAGKIKNDHQASDKFYQFLLAAFQNINQSMADDASIYVFHADTEGLNFRRAFQDAGFYLSGCCIWKKQSLVLGRSPYQWQHEPVLYGWKKTGKHEWYTGRKESTIWEFDKPKQSKEHPTMKPIPLLAYPIMNSTMTNCTVLDPFGGSGSTLIACEQTKRTCFMMELDEKYCDVIVKRYIEQVGSEQDVTLERDGKTIPYSELIKSDQ
1389190..1389822                   Virulence-related protein; LSJ_1358                                                  N/A                 LactobacillussalivariusMIINFDVTGPRRKQLVTAIAGFTNRKAEYQYTPTYAYKIGPYIVTKDGELVYQDEDVQPLLATLAKQGFNPKDDKVSLKLSYNRESFDESDLNHLKQLIWAKGNLIKGALAIDSLPLEVTDEKVSLDWFKDIKPEEAQAYQLFANHLVDYAKKRTRVITQPREYKNPRYAFRCFLLQLGFIGPEYKEARKILLSKLHGSCSFRKEATNHA
1390084..1391685                   PHAGE_Gordon_Nymphadora_NC_031061: hypothetical protein; LSJ_1359; phage(gi100002)     1.40e-103           LactobacillussalivariusMNKLKNYQPSRFMAKDSTYNKEAADFAVSFIECLCHTKGTWAGKPFELIDWQEQIIRDIFGILKPNGYRQFNTAYVEIPKKQGKSELAAAVALLLCCADGEERAEVYGCAADRQQAAIVFDVAADMVRMNPALKKRCKILASQKRLIYEPTNSFYQVLSADAYSKHGFNVSGVIFDELHTQPNRKLYDVMTKGSGDARTQPLYFLITTAGTDEHSICYQVHQKALDIMEGRKHDPRFYPVIYGADREEDWSDPEVWKKANPSLGVTVAMEKVKDAYNSAKENPAEENTFRQLRLNQWVKQDVRWMPMDKWDACAFPVDPNQLRGRPCYGGLDLSSTTDITAFVLVFPPLDDSEGFTLLPYFWIPEDNVDLRVRRDHVPYDIWKQQGFLQTTEGNVVHYGFIEHFIEELGKKYNIQEIAFDRWGAVEMVQNLEGMGFTVVPFGQGFKDMTPPTKELMRLTLEKKIAHGGQPVLRWMMDNIYIRTDPAGNIKPDKAKSTEKIDGVVATIMGLDRAIRNGGGDGDSVYDNRGLLLI
1391713..1391874                   Hypothetical protein; LSJ_1360                                                       N/A                 LactobacillussalivariusMDYEQGKAPIDISLLTKKQFDSEIQKGFSDFENGSTFTAEQVQAQLLKHRNDN
1392236..1393492                   PHAGE_Klebsi_phiKO2_NC_005857: putative portal protein; LSJ_1361; phage(gi46402090)     6.08e-81            LactobacillussalivariusMSIFNKLFHTNKASPKNTLSSTMSFLFGSTTTGQNVTERTAMQNTAVYACVRVLAESLATLPLHLYQLTNDDGKQRVNDHPLSFLLHDAPNPEMTSFIFRETMMNHLLLWGNAYAQIIRNGQGQITGLYPLMPDRMDVNRAHNGGLYYTYTRNYDDYQAKDESKQVILLSDEVLHIAGLGFDGLIGYSPIAMAKNAIGLSLAAEQYGSTFFKNDATPGGILEHPNVVKDPERLRKSWQSQFSGPSGHSIAVLEEGMTFHQLSIPPDQAQFLDTRKFQLDEIARIFRIPPHMIGDLERSTFSNIEQQSLEFVKYTLNPWCVRWEQAMNQQLLSKEEQGRYFVKFNVDGLMRGDYQSRMNGYAIGRQNGWLSANDIRELEDLNKIPAEDGGDEYLVNGNMLPVKEAGQFYQTKSTGSDQA
1393489..1394151                   PHAGE_Geobac_E2_NC_009552: putative Clp peptidase; LSJ_1362; phage(gi148747731)      6.07e-44            LactobacillussalivariusMKRFWNWSSENDTPTLTINGTIAPDSWIDDEVSPKIFQNELNQNHGPIDVWLNSPGGDCVAASQIYTMLMSYPDDVNIKIAGIAASAASVIAMAGTEVSMAPTALMMIHNPLTIAAGNRSDMAKAIQQLDETKESIINAYEIKTGLPRGKIAALMDEQTWMNPNKAIELGFADEVLNAESVSNSYTYSERQVNLQILNKLQSNNHYPIESLKRRLFLLPH
1394172..1395350                   PHAGE_Geobac_GBK2_NC_023612: minor capsid protein; LSJ_1363; phage(gi589893767)      7.78e-40            LactobacillussalivariusMSKLTELQTKRAKIWQQAKDFLDEKHQKSDVLSVEDNATYEKMEADVVSLGKEIDRLTKQMEIDNQLKMPTSQPLTTNPATDKRGLVTNYSQDFWNLMRGQAPVTNALKEGTDPDGGYLVPDEFEKQLIQKLHEANILRSISNVIQTNSGEHKIPVVATEGTASWMEEEAAYTESNTQFSQVSRGAHKLGTLIKISEELLNDSAFDLMGYLSEEFGRRLGDVEEKAFLTGTGSGQPTGILNDTTGATLGSTAKSAADINFDDLIDLFYSLRAPYRKNAVFIMNDDTVKAVRKLKDKNDQYIWQPSVQAGQPDRILNCPVLTSQYMPTLAASNKPVLFGDFNYYWIADRQGRTFKRLNELYAVTGQVGFLGSQRVDAKVILPEAIKYLSMAAK
1395641..1396021                   PHAGE_Geobac_E2_NC_009552: putative head-tail adaptor; LSJ_1364; phage(gi148747735)     4.30e-10            LactobacillussalivariusMQKQNNRTSKIADIGELNQRIQLMKIETYGRNPNTYQPLERNVVFANIWAKVSALHGQEYYTAVSVKLEKQLSFIVRYRPDIDEKTNIWFDGRGYNIGFIDNVKYRNEYLEIKANYSKGVRPPNED
1396206..1396433                   PHAGE_Paenib_Tripp_NC_028930: holin; LSJ_1365; phage(gi971756978)                    7.83e-16            LactobacillussalivariusMRKVLILVLVGIAHALDVYLLKNGSAIRTATIFFYVSNEGISLLENASRLGLPVPEKLKEVLKQLHGKNDDHNDQ
1396531..1396719                   Hypothetical protein; LSJ_1366                                                       N/A                 LactobacillussalivariusMDKPKMEFKITTQEIIDDLHYHQAQAIAEDFLARGLINQSQFEEIEKLNRQSFPPLLAELMV
1396782..1398332                   PHAGE_Bacill_Gamma_NC_007458: site-specific recombinase; LSJ_1367; phage(gi77020163)     4.25e-33            LactobacillussalivariusMANVTKLTNPQPKVQATLQVAAYCRVSTNSDEQEDSLANQQAHFKSYIRKQPNWQLHQIYYDNGVSGTKAQNRAGLQTLLKDCRNGQIDLVLTKSISRFSRNTTDCLRIIRQLKQLDIPVIFEKENINTDSMDSELILSVLGSLAQDESQSIAYNVRLGYQQWASNGVFHYSLPPYGYQKDDKRDLIINPIERKVVLQIFNWTIEGKSPGQIAKLLNRQAIPTKRNGNWHDSTIRGILQNTVYLGTTEFQKTFTDDGYRRHPNQGEQGKIIIEEHHPAIIDQATFTQVQKIIKLKQKFHPQAKNPQPHTFSRKISCENCQKLFKRQNRSDQIYWGCQTHIKHAKDCPVKSIREDTLQLAFCTMINKLIFSRKFLLEPLVEQLQAEQNQEQTAKLSQVETELKETKDKQANLQHLWKQELIEKDFFTKQDVELEQKIADLQSEIKRIKQLLDGQDSKLPLIHELLRLCQRSNYLTAFNIDLFNQLIESITVDQDHNLTFHLKCGLNLTEGSNHHVKT
1398319..1398723                   Hypothetical protein; LSJ_1368                                                       N/A                 LactobacillussalivariusMSKLKYGYQWQIGSIVINPDQADVVKQIFTGFLAGQNRNQLASQFNLTHTTVLRILTSNKYAGAEDYPQIISVADFKQVQEKLKQQIVRKPKQQPTPPTKFYRGIIKKYSDDAFKQAEHIYQLIYSEVEVYGKS
1398710..1400296                   PHAGE_Geobac_E2_NC_009552: putative recombinase; LSJ_1369; phage(gi148747753)        1.15e-24            LactobacillussalivariusMAKVRIIPAQVKQGNRNRQIEETEAKLKVAAYCRVSTLYEDQASSYETQVAHYKEYITKNPKWELAGIYADDGISGTDTKKRNQFNQMIDDAKQGKIDLIVTKSISRFARNTIDCLQYIRELKELHVAVFFEKENINTMDAKGEVLITIMASLAQQESESISRNIKIGLQYRYQRGQVIVNTARFLGYDKDDDGNLVINPEQAKVVKRIFYECLTGKSAIEIARELTKEGLKNGIGRTKWHSSGIIKILRNEKYIGDALLQKTYTVDFLTKKRVKNDGQVPQYYVENNHPAIISRALFYQVQKLLDMRREGFTTEGGHHHGYTNAYCFSSIVFCGRCKDIYTRCVWYRPKIGEVEKVNVWRCYSRLHWNHKGKRCMGRTITEADLEEASLKAMNELIQQHQLADKQIAANILKVTKGTTGPSLDDLDQQLEDQQLLLLSMSTHNKNVEQLTEQVQALRKQREQLIQQEIDHDIKRSYLKNIQSFFQTYQGGLTKFDEKLVRLLIEKITIFKSKIEFTFKDGEVITIKA
