gi|00000000|ref|CP008745.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 93833, gc%: 53.10%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
15430..15441                       attL                                                                                 N/A                 TTGCTTGCCCGG
21465..22247                       PHAGE_Mycoba_Squirty_NC_026588: non-functional integrase; DC51_p0044; phage(gi764159894)     9.08e-07            MSQPPLPAVCTQAASALLPVAIDYPAALALRQMAMQHDDYPKYLLAPEVSALLHYVPDLHRRMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRAEKAARTAGRMPSGSQPHRLVPLSDNQYVSELQMMVATLKIPLERRNRRTGRTEKARLWEITDRTVRTWIGEAVEAAAADDVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQALMGHKSVSSTEVYTKVFALDVAARHRVQFQMPGADAVAMLKGGS
22256..22807                       diguanylate cyclase; DC51_p0045                                                      N/A                 MHFSAFRLQQAIRNREFTPFYQPIVCATGGEVVGCEMLARWLHPQKGLLSAGNFIPAIEATGLGGALLRGLADEVCGDGQDLARSAGRRLMMTLNLSLSLVMTPLFRPHLLALSIRLEQAGMTPVFEITEREDIRAFPQAAVFRQLAAGGLRFAVDDFGTGHAGPASTVADRMIARTVSLARC
22994..23482                       hypothetical protein; DC51_p0046                                                     N/A                 MNQPLLFRTVAGRQSNHEGFYMPPGIRHLGTLSLYRAVAWWGLFLGREFTRDDVSEAFSIEPRRASGILNYICNRHNDDDICFDSRLHPVRGGRAQLVVRIRAVESRPDTIRRQRTDRPGGKVSDRQYDRQMAHWLLSRPAGGDTAKLAAWQAACPVREASC
23476..23961                       Putative inner membrane protein; DC51_p0047                                          N/A                 MLIIVSDCQFTRLALTRLLAHLDPVNMSVARWLQTAPPAGSHVLLAASPGMLASLVPACHHARTSLSLKLALLGSGGQAVFLNTLGLRPDCLLPRTASATQLKAAVSSWLRRARGWRQATTESLSLRERQALCATLAGLSARTAPGSASAPKPFTAIAAAR
23988..24158                       hypothetical protein; DC51_p0048                                                     N/A                 MIGLPDPAAHYSMMLHPGSPPFFSSRTTGAGSHNVSAHHPVHLPVTHRSHYTDMTL
24214..24801                       hypothetical protein; DC51_p0049                                                     N/A                 MQATTPLVLTLTPAMTARADIASRIGQSPFSADRDAALAGIRTVPYTLKKGETVAQAHGLTVPQLKKLNGLRTFARGFDHLQAGDELDVPAVPLTGGKGDNNRHDARGPFAADRENEDAQAQQMAGMASQAGSFLASHPDGQAAAGMVTVTSGRLTCSGRTSSSTMTSPATTPAPASAENTGATSLSFPPTPMSA
24825..25241                       Invasin; DC51_p0050                                                                  N/A                 MEDYEERPASGWDLRAEGYLPSYPQLGAKMVYEQYYGNEVGLFGKDERQKNPHALTAGVSWTPVPLLKLSAEQRAGKAGEHDTRFGAEASYRIGDSLRSQLDPDAVGALRSLAGSRYDLTDRNNDIILEYRKQEVTCQ
complement(25308..25658)           PHAGE_Clostr_c_st_NC_007581: putative IS transposase (OrfB); DC51_p0051; phage(gi80159731)     3.32e-12            MLRATKVCIYPTPEQAEHLNAQFGAVRFVYSKSLHIKKHAYQRHGVSLTPRKDIKPLLAVAKKFRKFRKYAWLKEYDSIALQQAVINLDVAFSNCFNPKLKARFPMFKRKHGKLLG
25876..26139                       PROPHAGE_Escher_Sakai: putative transposase; DC51_p0052; phage(gi15834436)           3.33e-25            MECEIIEMDGEQDHVHLLIAYPLKLGVSVMVNNLKSVSSRLLRQQNTHLRMQSKTGLLWSRSYFACSAGGATIETLKAYVLRQNTPE
complement(26266..26916)           hydrophilic protein; DC51_p0053                                                      N/A                 MRVSGSASSQDIISRINSKNINNNDSNEVKRIKDALCIESKERILYPQNLSRDNLKQMARYVNNTYVHYSGNCVLLSACLHYNIHHRQDILSSKNTASPTVGLDSAIVDKIIFGHELNQSYCLNSIDEVEKEILNRYDIKRESSFIISAENYIAPIIGECRHDFNAVVICEYDKKPYVQFIDSWKTSNILPSLQEIKKHFSSSGEFYVRAYDEKHD
complement(27004..27123)           hypothetical protein; DC51_p0054                                                     N/A                 MLINLLINKLQIFIEGSPLTDEFRHRKGITLMHIDMSAL
complement(27177..27902)           Hydrophillic virulence protein; DC51_p0055                                           N/A                 MPINRPNLNLNIPPLNIVAAYDGAEIPSTNKHLKNNFNSLHNQMRKMPVSHFKEALDVPDYSGMRQSGFFAMSQGFQLNNHGYDVFIHARRESPQSQGKFAGDKFHISVLRDMVPQAFQALSGLLFSEDSPVDKWKVTDMEKVVQQARVSLGAQFTLYIKPDQENSQYSASFLHKTRQFIECLESRLSENGVISGQCPESDVHPENWKYLSYRNELRSGRDGGEMQRQALREEPFYRLMTE
27915..28061                       hypothetical protein; DC51_p0056                                                     N/A                 MRYGYIAILLDINSQFFLIKRLVIQKTSFFIRRKNDISVRSEQKVKEG
complement(28183..29958)           PHAGE_Pseudo_PaMx28_NC_028931: morphogenesis protein; DC51_p0057; phage(gi971757078)     4.82e-06            MLILNGFSSATLALITPPFLPKGGKALSQSGPDGLASITLPLPISAERGFAPALALHYSSGGGNGPFGVGWSCATMSIARRTSHGVPQYNDSDEFLGPDGEVLVQTLSTGDAPNPVTCFAYGDVSFPQSYTVTRYQPRTESSFYRLEYWVGNSNGDDFWLLHDSNGILHLLGKTAAARLSDPQAASHTAQWLVEESVTPAGEHIYYSYLAENGDNVDLNGNEAGRDRSAMRYLSKVQYGNATPAADLYLWTSATPAVQWLFTLVFDYGERGVDPQVPPAFTAQNSWLARQDPFSLYNYGFEIRLHRLCRQVLMFHHFPDELGEADTLVSRLLLEYDENPILTQLCAARTLAYEGDGYRRAPVNNMMPPPPPPPMMGGNSSRPKSKWAIVEESKQIQALRYYSAQGYSVINKYLRGDDYPETQAKETLLSRDYLSTNEPSDEEFKNAMSVYINDIAEGLSSLPETDHRVVYRGLKLDKPALSDVLKEYTTIGNIIIDKAFMSTSPDKAWINDTILNIYLEKGHKGRILGDVAHFKGEAEMLFPPNTKLKIESIVNCGSQDFASQLSKLRLSDDATADTNRIKRIINMRVLNS
complement(30140..30907)           outer membrane protein; DC51_p0058                                                   N/A                 MNMNQTTSPALSQVETAIRVPAGNFAKYNYYSVFDIVRQTRKQFINANMSWPGSRGGKTWDLAMGQAQYIRCMFRENQLTRRVRGTLQQTPDNGTNLSSSAVGGIQGQAERRPDLATLMVVNDAINQQIPTLLPYHFPHDQVELSLLNTDVSLEDIISESSIDWPWFLSNSLTGDNSNYAMELASRLSPEQQTLPTEPDNSTATDLTSFYQTNLGLKTADYTPFEALNTFARQLAITVPPGGTVDCGYSACQPAV
complement(31081..31245)           PHAGE_Edward_GF_2_NC_026611: putative lysozyme; DC51_p0059; phage(gi764162325)       9.83e-18            MGINALAHATLLKKLNNGDYDGAANEFLKWDHASGQVVPGLTRRRSAERCLFLS
complement(31419..32312)           Virulence genes transcriptional activator; DC51_p0060                                N/A                 MDFLINKKLKIFITLMETGSFSIATSVLYITRTPLSRVISDLERELKQRLFIRKNGTLIPTEFAQTIYRKVKSHYIFLHALEQEIGPTGKTKQLEIIFDEIYPGSLKNLIISALTISGQKTNIMGRAVNSQIIEELCQTNNCIVISARNYFHRESLVCRTSVEGGVMLFIPKKFFLCGKPDINRLAGTPVLFHEGAKNFNLDTIYHFFEQTLGITNPAFSFDNVDLFSSLYRLQQGLAMLLIPVRVCRALGLSTDHALHIKGVALCTSLYYPTKKRETPDYRKAIKLIQQELKQSTF
32576..32713                       hypothetical protein; DC51_p0061                                                     N/A                 MLMAMNVELTAEQKIALEALQRKSRDPINEQNRCTTGPELNGRRY
32921..33958                       PROPHAGE_Escher_EDL933: putative transposase; DC51_p0062; phage(gi15803522)          3.17e-121           MPIIAAIPDEERQLMRKEAQQTHDKNHARRLIAMLMLHQGMTVTDVARLLCAARSSVGRWINWFTLHGVEGLKSLRPGRAPRWPVADILQLLPLLVQRSPKDFGWLRSRWSTELLALVINRLFDVTLHRSTLHRYLRQADMVWRRAAPTLKIKDPHYEEKRLVIDQALAQEQTAHPVFYQDEVDIDLNPKIGADWMPKGQQKRIATPGQNQKHYLAGALHSGTGRVHYVSGSSKSSDLFISLLETLRRTYRRAKTITLVADNYIIHKSRKVERWLEENPKFRLLFLPMYSPWLNPIERLWLSLHETITRNHQCRYMWQLLKQVAQFMNAASLFPGNQQGLAKVER
complement(34147..35115)           PHAGE_Burkho_BcepMu_NC_005882: gp08; DC51_p0063; phage(gi48696918)                   3.40e-05            MRVEVMEHYGLTQSIEQAGYYETAHHKQLMKDIKGAIREGRLIAVCGVVGSGKTVTLRRLQQQLLDENKIIVARSLSVDKQSVRLATLINALFYDLAQDKQVQIHKQGERRERELQELVKKGKRPVALFVDEAHDLNGNTLTGLKRLMEVVEDGGGRLSVVLAGHPKLRNDLRRPTMEEIGYRTDIFTLDGITGSQREYIQWLLKTSTGKGKPEDILTTEAVDLLAMKLRTPLQVQLHLTLAMEAGYQTGEKPITATLVESVLSRQLDDLEPTLTRHGYRLKDMVEQFDAKPAEIRALFNNQLDPARTAELRDRMLAVGLPI
complement(35105..36769)           PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative transposase A subunit; DC51_p0064; phage(gi966198691)     1.84e-19            MSSRRSAIPSDSLLQLRQRLDRLPPKSPERANQIAATAQLYGISVTTVYRALHLVLKPRTAHRSDHGQPRILPPSELEHYCELIAALKLRTTNKSGRHLSTGRAIQLLEEHGVETVQGLIKSPKGLLRKQTVNRWLSRWRLDQPRLLREPPAVRFQAENSNDCWQFDMSPSDLKHIERPDWVDPARGEPTLMLFSVVDDRSGVAYQEYRCVYGEDAESALRFLFNAMAPKTRSDFPFQGRPKLLYLDNGPVAKNHVFQNVMQSLKVDWLTHTPAGKDGTRTTARSKGKVERPFRTVKEAHETLYHFHKPETELQANEWLWNYLSRYNAQRHRSEKHSRLEDWLANIGQEGVRDMCSWEQYCRFAREPESRKVGVDARITIDGTAWEVEPDMAGETVILLWGLFDEEMYVEFTGETWGPYYPVSGPVPLHRYRTFRRGKAAERADRIHALARQLNIPISALSGSDLRVVSDDTQQRIDALPHQPFDTRKFEYHFPTVIAAKLAIADDLAIPLARMSDEDRAFIDSILTETLNRSEVLARIRDYFRSRQSGEDHAG
complement(36753..37313)           PHAGE_Ralsto_RSM3_NC_011399: hypothetical protein; DC51_p0065; phage(gi209901327)     1.13e-39            MALYGYARVSTSDQDLTLQTQILRAAGCEIIRAEKASGSGRTGRSELQLLLEFLRPGDTLMVTRVDRLARSIKDLQDIVYALNQQGVTLRATEQPVDTRSAAGKAFLDMLGVFAEFETNLRRERQMEGIAAAKARGVYRGRKPSIDPAVVYRLYTIEKMGATAIARQLGIGRASVYRALENYEQPA
complement(37520..38260)           Carbonic anhydrase; DC51_p0066                                                       N/A                 MEQNQPAQPSRRAILKQTLAVSALSVTGLAALSVPTISFAASLSKEERDGMTPDAVIEHFKQGNLRFRENRPAKHDYLAQKRNSIAGQYPAAVILSCIDSRAPAEIVLDAGIGETFNSRVAGNISNRDMLGSMEFACAVAGAKVVLVIGHTRCGAVRCAIDNAELGNLTGLLDEIKPAIAKTEYSGERKGSNYDFVDAVARKNVELTIENIRKNSPVLKQLEDEKKIKIVGSMYHLTGGKVEFFEV
38671..38805                       hypothetical protein; DC51_p0067                                                     N/A                 MSRHSYDTEKSGVALSLVWLERGHPRASAVADVLSAAGFPDFGK
complement(38915..39403)           Putative cytoplasmic protein; DC51_p0068                                             N/A                 MPQDESVVKRAREYFFRHHRYTEEDLESDYQAELCNYRDDTWEAPQRAARLSAAVKRYKTYEMLYFFFQIADEAGLDYTPLVVKRLCAHLFDRQGSQNIIVDIFGQKGRMHRSHDSDPDIIAAVAERYRQQAEDHWQTVLKNIGRVKQDYQKNQNRQKGAGD
39662..40777                       PHAGE_Strept_DT1_NC_002072: putative tail component protein; DC51_p0069; phage(gi29165636)     6.31e-05            MRPATYEPEQIIEAGLALQAEGRNITGFALRNQVGGGNPTRLRQIWDEYQASQSTVVTEPVAELPVEVAEEVKAVSAALSERITQLATELNDKAVRAAERRVAEVTRAAGEQTAQAERELADAAQTVDDLEEKLDELQDRYDSLTLALESERSLRQQHDVEMAQLKERLAAAEENTRQREERYQEQKTVLQDALNAEQAQHKNTREDLQKRLEQISAEANARTEELKSERDKVNTLLTRLESQENALASERQQHLATRETLQQRLEQAIADTQARAGEIALERDRVSSLTARLESQEKASSEQLVRMGSEIASLTERCTQLENQRDDARLETMGEKETVAALRGEAEALKRQNQSLMAALSGNKQTGGQNA
43515..43526                       attR                                                                                 N/A                 TTGCTTGCCCGG
