gi|00000000|ref|CP008758.1|  Burkholderia pseudomallei strain 1106a chromosome 1, complete 3984293, gc%: 67.97%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
198383..198462                     attL                                                                                 N/A                 ACGATTGGTCACGTTGACCACGGCAAGACGACGCTGACGGCAGCGATCGCGACGGTGCTGTCGGCGAAGTTCGGCGGCGA
203515..207621                     PHAGE_Bacill_PBS1_NC_043027: hypothetical protein; DP48_178; phage(gi100284)         1.94e-18            BurkholderiapseudomalleiMQYSFTEKKRIRKSFAKRSIVHQVPFLLATQLESFSTFLQADVPTAQRKSEGLQAAFTSVFPIVSHNGFARLEFVSYALSSPAFNIKECQQRGLTYCSALRAKVRLVLLDKESPSKPVVKEVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDVLYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMDEGAQMEFVPERLRGEVARFDITDREGKVIVQKDKRINAKHIRDLEAAKTKYISVPEDYLLGRVLAKNVVDGDTGEVIANANDEITEGVLEKLREAKIKEIQTLYTNDLDQGPYISSTLRVDETVDKTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEDAYDLSKVGRMKFNRRVGRDEITGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERAVKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKVVDSKVTDQIDYLSAIEEGRYMIAQANAAIGDDGALVDELVSSREAGETMMVTPDRIQYMDVAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTVAVDSGTTVQALRGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKMGDKVSRGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISERVVADDRYTSIHIEELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELKRYRLDLNDQLRIVEGDAFQRLARMLVGKVANGGPKKLAKGTKIDQAYLEDLDHYHWFDIRLADDEAAVQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPVEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAAKGLGWRIGEMLARQTKIEELRVFLTKIYNESGRAEDLESFSDDEILELAKNLREGVPFATPVFDGATEEEMSKMLDLAFPDDIAEQLDMNPSKNQVRLYDGRTGEPFERRVTVGYMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVKSDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
207643..211881                     PHAGE_Bacill_AR9_NC_031039: portal protein; DP48_179; phage(gi100153)                2.88e-16            BurkholderiapseudomalleiMKALLDLFKQVQQEEIFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAYVVIDPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEMGAEGVRELLRSINIDEQVETLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPDWMILEVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTPVVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAINGKGEGLSFTGVSEVIRAYENKEVELASRVNVRITEMVRNEDTSEGAPQFVPKISLYATTVGRAILSEILPPGLPFSVLNKPLKKKEISRLINTAFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPTQKETIVGDAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSEAVGKAMMEQLSTEPVIDRDGNETRQESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEALRDRILGRVAASDVVNPETQETLYEAGALLDETAVEDIERLGIDEVRVRTALTCETRYGLCASCYGRDLGRGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTVRFTASMRYVTNAKGEQIVISRSGEALITDDIGRERERHKIPYGATLLQLDGAAIKAGTQLATWDPLTRPIITEYGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQAAKSVRPQVKLLDANGDEVKIPGTEHAVQIGFQVGALITVKDGQQVQVGEVLARIPTESQKTRDITGGLPRVAELFEARSPKDAGILAEVTGTVSFGKDTKGKQRLVITDLEGNQHEFLIAKEKQVLVHDGQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVQIVDNGDTRFIPGEQVERSDMLDENDRMIAEDKRPATYDNILLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKAKEQSDRERFDQIAAEEAFEFGTPSAPAEEPQHPAE
212035..213141                     PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; DP48_181; phage(gi145708108)     0.0                 BurkholderiapseudomalleiMLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCERCGAARLEKLDWLGRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRKPACAEKAWGQWFEQAQQSGIAALTCLISSGHFNLGERPRLLQLNNTAA
complement(213089..213940)         PROPHAGE_Xantho_33913: IS1477 transposase; DP48_180; phage(gi77747809)               2.75e-64            BurkholderiapseudomalleiMSAPARRQQVTYAKARGLSERRACALMSVARSALHYESTLAVRDAPVLAAMSILSAQYPRYGYRRIQIFLERQGHPMSADRAWRLWRLAGLQVPRKRPRRRVSVQRPRPQPATAARHVWAYDFVFDACANGQQLKCLTVIDEYTRECLAIDVAGSIRSGRVIEVLSQLVSLHGAPRYLRSDNGPEFVSRATLKWAAQNGMDMALSDPGKPWQNGADESFNGKFRDECLSLEWFRTRTEAKVVIEQWRRHYNAIRPHSSLAYLTPDEFKQRYCSTEATEAVLQD
complement(213937..214200)         PROPHAGE_Xantho_306: ISxac2 transposase; DP48_182; phage(gi21244663)                 2.54e-27            BurkholderiapseudomalleiMKKSRFTEEQMVTILREADKAPVAEVAKKHGVSEQTIYNWRQHFGGLEAADVKRLKQLEQENARLKKMLAERDLELDVMKEINAKKW
214273..214467                     PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; DP48_183; phage(gi145708108)     9.10e-37            BurkholderiapseudomalleiMQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAAFPGIPR
214607..216454                     PHAGE_Acinet_vB_AbaM_ME3_NC_041884: deoxynucleoside kinase; DP48_184; phage(gi100082)     5.41e-40            BurkholderiapseudomalleiMSRSLEILNEVFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSEAGRGAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALRDGDIDLLYVAPERLMTPRFLDLLERARIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPDVPRIALTATADAITRDEIVQRLALDDARIFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAGVVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEIRQKHQEMFQREEGVVMCATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMAYGLGDVVQQRKMIDESEADDTHKRVQTSKLDALLGLCETASCRRVRLLAYFGETSGPCGNCDTCLEPPATWDATREAQMALSCVFRAQRASGFNFGASHLIEVLRGARTEKVQQRGHDSLSTFGIGAELSEAEWRAIFRQLVAFGYLAVDHGGFGALVLTEASKPVLKGEEKVTLRRYVKPARTRQSSGRSGARVDPTAGMSARERACWERLRAWRAETAKSDGVPAYVIFHDATLAEIARNAPESIDDLRHIPGIGARKLDRFGDEILEVVESA
220005..220084                     attR                                                                                 N/A                 ACGATTGGTCACGTTGACCACGGCAAGACGACGCTGACGGCAGCGATCGCGACGGTGCTGTCGGCGAAGTTCGGCGGCGA

#### region 2 ####
305113..305634                     PHAGE_Pseudo_pf16_NC_041881: hypothetical protein; DP48_285; phage(gi100017)         1.17e-29            BurkholderiapseudomalleiMQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIYARENGQGMAFQVDVAAETGEADGSDALAVAEEGDDAGARHASADGAAEAAPEPGDAAEELPKSDGDGDGDGAKGSRPRLKIVK
305655..305730                     tRNA                                                                                 N/A                 GCCGGCTTAGCTCATCTGGTAGAGCAGTTGATTTGTAATCATCAGGTGGCGGGTTCGAGTCCTGCAGCCGGCACCA
305922..305933                     attL                                                                                 N/A                 GCCTTATGCCGT
305927..306757                     PHAGE_Stenot_S1_NC_011589: putative integrase; DP48_287; phage(gi213163927)          3.23e-75            BurkholderiapseudomalleiMPLTDVAIRKAAPREKPYRLADSGGMYLEVSPAGGKYWRLKYRFLGKEKRLALGVYPDVSLAAAREKRDDARKKLAAGVDPSEAKKADKRAARLAATNSFEAVALGWMDELKPYVTAGSMAKTKARFEKDVFPWIGKRPVAEIDAPEILTVLKRIDSRGARFTAHKVRGEISRAFRYGIKEGYCKFDPARDLVNAIPPAQTTHFASITEPAKVGAMLRAFDGFSGTFPVLCALKLAPMLFTRPGELRKAEWAQFDLDKGEWRYLVTKTSTEHLAGC
complement(306907..307992)         PHAGE_Burkho_KS5_NC_015265: ISBmu23 transposase; DP48_288; phage(gi327198044)        6.66e-08            BurkholderiapseudomalleiMQEPLFTTVKLEDFVPADHPLRPLRLLVNQALKRLNGLFGTIYADSGRASIAPEKLLRALLLQVLYSVRSERMLMEQMRYNLLFRWFVGLAIEDAVWDHSVFSKNRDRLLEHEVVEAFFTEVMSLADKQGLLSREHFSVDGTLIQAWASHKSFRPKDGSDDPPAGGGRNVDTDWKGKRRSNDTHESSTDPDARLFRKGRQSGAILCYQGHILMENRSGLVVGAVVSHADGFGERASALRLLDCVPGRHAKTLGADKGYDMRDFVRDCRARKVTPHVARNDAHQGGSAIDGRTSRHAGYGISQVIRKRIEEHFGWGKTVGRIRQTAYRGIKRVDQHFKLTMLASNLTRMARILAAVPQGAAR
308087..308102                     attL                                                                                 N/A                 TTTCAACAGCCTGCTA
308205..308483                     PHAGE_Entero_P4_NC_001609: integrase; DP48_289; phage(gi9627511)                     1.40e-18            BurkholderiapseudomalleiMSDAAVNAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQLAHAVPDTLGKAYNRTKFLKERKAMMQKWADYLEKLKAKVDLKS
308480..309187                     hypothetical protein; DP48_290                                                       N/A                 BurkholderiapseudomalleiMNERNNNFRSQLGIMARCLELARRLSKRYVMLNPDKPPTTFATELCYWIRGLDDATIDEPLELLNLFLKPNDPAAPLEQLPTDPMVPVILSATFMLRAMAAEAEGQYERGWNNLTDAEYWCGIAQGARHVALVQEEAVADTYTRTSKKAAAARHDKERETMEFARQRARELCPDGGWRRRIAAARRIRDEVVAYAAKLDWRMTADRATDLIDKWLSDMHDAHQLFPTQRRMPKST
309439..309651                     PHAGE_Entero_P4_NC_001609: transcriptional regulator; DP48_291; phage(gi9627517)     9.53e-07            BurkholderiapseudomalleiMLAQAEIKIPVGARVLRIKDVVERTGLSRSTIYVLMKSDPTFPKKVGLSARTTGVIEHQLDAWIASRTIA
309661..311199                     PHAGE_Mycoba_Thyatira_NC_051597: capsid maturation protease; DP48_292; phage(gi100067)     1.13e-19            BurkholderiapseudomalleiMFSSGWRNRRNYASGPVLEVASEIPVLPVIWLWRFWLARGKLHILAGPPSTGKTTLALQVAATLTLGGMWPDGSLAPIGRVVIWTCEDGIEDTIMPRLIACGVDPSRVYVLRVTNENNRTRTFEFTRDLVPLEAKVRELGDVALVIIDSIVQVVTGNSNNNSQVRKDLDPLVKFAEQTNCAILGLTHVNKGSKKKDPLERVNGSTAIGALARLVWIVARDANRVCEGVQSSVLVRAKSNLGPTDGGFAYHVEGVDVPIDAVNITHSSKVVWDEPLRGSPKDILDDVEGASASGREDRKQEARNFLLALLAHGPIPAEKVQEEAKQAAVSWATVRRASDELGVRKYRAMGDTRWYWVLENGSAGGWQHQSGPTSTPGFSAAFDTMSGSAASARTADPFAGYADALLGWRTPSLQSTSVPAPPMREIGEQDAQHEQVEPAAETVGGIDDGLWRFMVNECLARYRAASQPIDADEQVELRTAIVDSVLDTRVEVDDAEWIAAARTSLLTADFWFA
323109..323124                     attR                                                                                 N/A                 TTTCAACAGCCTGCTA
323131..323142                     attR                                                                                 N/A                 GCCTTATGCCGT

#### region 3 ####
complement(351643..352761)         PHAGE_Burkho_phiE12_2_NC_009236: gp8, bacteriophage protein; DP48_320; phage(gi134288703)     4.92e-130           BurkholderiapseudomalleiMTKDELIAWANDPRRQDTLPFGLYEPLEQKAIVGAALVVRGALYFKGGYTKPVRAALVDCYNRYMAAIDEFAKVFAKAAEQPVPKASPMRWFYEEGQKPVEFAKARGFPAVADTLPSTQVLVATTTSADHKLAAGFFEFSAFCIPDWQAELGDRGLDAMVFSVPRRFLEMCPGTFEKLFAEFAAAVPTIWGHAGIGVNLPPLDPEANEASENFWSRLYGPGIDVGDPMRTSIRDLVDKIKTVDWLTALGGDLVRHIGGADALMLPPDWFRKTPLDRGGMLIQAGVAPTAGVPIGKGIPPAPPAAYVLLNHALRSIVADKSGILQRGTVNSTAPLLNTTVACEAWLQRFNVPDDELNGYWVELHKTQKLSPSS
complement(352767..353540)         PHAGE_Burkho_phiE12_2_NC_009236: gp9, bacteriophage protein; DP48_321; phage(gi134288693)     3.78e-56            BurkholderiapseudomalleiMSGYSGGEAAGGMRTGGQTTVVGARKGITPEDKALLCRVMCNCGKIGVWTRGGGRLQRQKCVEQRIDAENARSIAETGQKTVYVPEINYNMTTVPPSPIMSADDPLEPHDDLLGYIVNSWPGKMKGYLEGKKAGLDQTRRPDVVIVHDPSQPPEQPNIRAVIEMKFEDALTRGQAADYIKIAGDEAKYVPLKKAQCGCPDEDAEKEPAPSTQRSTTSDTDELFGGNAGASHRTGPFGLPPLPPVGPGPATPGIGLPF
complement(353543..354073)         PHAGE_Burkho_phiE12_2_NC_009236: gp10; DP48_322; phage(gi134288697)                  1.05e-66            BurkholderiapseudomalleiMSFAFIREGDSTSHGGRVLACSPENKSDGVPLALLGDKVSCPKCGGVYPIVGVKNLGVTFDGRPVASEGDTTACGATLIASQNNTTAEPTSGGSIGGGKSVRPETNSQSAHSGRFQLLDDVTRRPVAGHSYTVRAADGRTIHGKTDANGFTDWLEGNDASSLTFSHNGTSGPTSTS
354923..356143                     PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; DP48_323; phage(gi145708108)     0.0                 BurkholderiapseudomalleiMLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCERCGAARLEKLDWLGRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRKPACAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAAFPGIPR
356430..356756                     PHAGE_Burkho_phiE12_2_NC_009236: gp37, bacteriophage baseplate assembly protein J; DP48_324; phage(gi134288737)     2.96e-64            BurkholderiapseudomalleiMRVRPQTDQVIVQSAKVVPYAIRATLRFFSGPDRGVALAEARKRTVKFAADMLRIGMEITVDGLHAAMRVAGVQKVLLGSPAGGVPVTHEQAPYCTGIELIDGGVADD
356963..357160                     PHAGE_Burkho_phiE12_2_NC_009236: gp36, phage tail protein I; DP48_325; phage(gi134288700)     2.30e-34            BurkholderiapseudomalleiMKAAIRIARKKGTAAAVREVCASFGANVAMREWFEKTPKGRPGTFEILMTVGARDGIPATGVTPG
357260..357661                     PHAGE_Burkho_phiE12_2_NC_009236: gp40, DNA methylase; DP48_326; phage(gi134288704)     1.08e-71            BurkholderiapseudomalleiMILRGVAVWDKTLGRMRLRRGGFAQQAEFVVWASRGAMRGCDVYLPGVFPCRLPLPKQHVTEKPLDIAREVVRLVPAGGVVCDLFAGSGTFLAAAREAGLHWVGSESNQAYHAISSARLDATTDDSGVQPRSI
358140..358646                     putative transcription activator; DP48_327                                           N/A                 BurkholderiapseudomalleiMQDAAYCVRAEQDYRLVEARAKKHHEDVLAAFAQARYESYLSYTDSIMKAWHIKDILAINPNDAVKAYVAHEHYVAEFMEPIYGVVAMIPCDRLWSWLAETLSPDNVPNNLYDFWISDNQGWSGTYRLENFVNSWFAAHPKQYEWESALKAYRGSMLGEVGDFRAALE
complement(358750..359115)         PHAGE_Burkho_phiE202_NC_009234: gp39, phage virion morphogenesis protein; DP48_328; phage(gi134288746)     4.03e-69            BurkholderiapseudomalleiMRGAQQSRVAARRNPDGSPYAPRKGKAGGKRLREKAGRVKREAVFRKLRTARYLRTDIDDTGLAIGFDERLSRIARVHHEGQKAPVEPGGPLAQYPVRVVLGFADADRELVRDRLLRPLNR
