gi|00000000|ref|CP008781.1|  Burkholderia pseudomallei strain Mahidol-1106a chromosome 1, 3985223, gc%: 67.97%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
2000365..2000444                   attL                                                                                 N/A                 ACGATTGGTCACGTTGACCACGGCAAGACGACGCTGACGGCAGCGATCGCGACGGTGCTGTCGGCGAAGTTCGGCGGCGA
2005497..2009603                   PHAGE_Bacill_PBS1_NC_043027: hypothetical protein; DP58_1729; phage(gi100284)        1.94e-18            BurkholderiapseudomalleiMQYSFTEKKRIRKSFAKRSIVHQVPFLLATQLESFSTFLQADVPTAQRKSEGLQAAFTSVFPIVSHNGFARLEFVSYALSSPAFNIKECQQRGLTYCSALRAKVRLVLLDKESPSKPVVKEVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDVLYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMDEGAQMEFVPERLRGEVARFDITDREGKVIVQKDKRINAKHIRDLEAAKTKYISVPEDYLLGRVLAKNVVDGDTGEVIANANDEITEGVLEKLREAKIKEIQTLYTNDLDQGPYISSTLRVDETVDKTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEDAYDLSKVGRMKFNRRVGRDEITGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERAVKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKVVDSKVTDQIDYLSAIEEGRYMIAQANAAIGDDGALVDELVSSREAGETMMVTPDRIQYMDVAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTVAVDSGTTVQALRGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKMGDKVSRGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISERVVADDRYTSIHIEELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELKRYRLDLNDQLRIVEGDAFQRLARMLVGKVANGGPKKLAKGTKIDQAYLEDLDHYHWFDIRLADDEAAVQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPVEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAAKGLGWRIGEMLARQTKIEELRVFLTKIYNESGRAEDLESFSDDEILELAKNLREGVPFATPVFDGATEEEMSKMLDLAFPDDIAEQLDMNPSKNQVRLYDGRTGEPFERRVTVGYMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVKSDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
2009625..2013863                   PHAGE_Bacill_AR9_NC_031039: portal protein; DP58_1730; phage(gi100153)               2.88e-16            BurkholderiapseudomalleiMKALLDLFKQVQQEEIFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAYVVIDPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEMGAEGVRELLRSINIDEQVETLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPDWMILEVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTPVVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAINGKGEGLSFTGVSEVIRAYENKEVELASRVNVRITEMVRNEDTSEGAPQFVPKISLYATTVGRAILSEILPPGLPFSVLNKPLKKKEISRLINTAFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPTQKETIVGDAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSEAVGKAMMEQLSTEPVIDRDGNETRQESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEALRDRILGRVAASDVVNPETQETLYEAGALLDETAVEDIERLGIDEVRVRTALTCETRYGLCASCYGRDLGRGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTVRFTASMRYVTNAKGEQIVISRSGEALITDDIGRERERHKIPYGATLLQLDGAAIKAGTQLATWDPLTRPIITEYGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQAAKSVRPQVKLLDANGDEVKIPGTEHAVQIGFQVGALITVKDGQQVQVGEVLARIPTESQKTRDITGGLPRVAELFEARSPKDAGILAEVTGTVSFGKDTKGKQRLVITDLEGNQHEFLIAKEKQVLVHDGQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVQIVDNGDTRFIPGEQVERSDMLDENDRMIAEDKRPATYDNILLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKAKEQSDRERFDQIAAEEAFEFGTPSAPAEEPQHPAE
2014078..2015124                   PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; DP58_1732; phage(gi145708108)     0.0                 BurkholderiapseudomalleiMEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCERCGAARLEKLDWLGRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRKPACAEKAWGQWFEQAQQSGIAALTCLISSGHFNLGERPRLLQLNNTAA
complement(2015072..2015923)       PROPHAGE_Xantho_33913: IS1477 transposase; DP58_1731; phage(gi77747809)              2.75e-64            BurkholderiapseudomalleiMSAPARRQQVTYAKARGLSERRACALMSVARSALHYESTLAVRDAPVLAAMSILSAQYPRYGYRRIQIFLERQGHPMSADRAWRLWRLAGLQVPRKRPRRRVSVQRPRPQPATAARHVWAYDFVFDACANGQQLKCLTVIDEYTRECLAIDVAGSIRSGRVIEVLSQLVSLHGAPRYLRSDNGPEFVSRATLKWAAQNGMDMALSDPGKPWQNGADESFNGKFRDECLSLEWFRTRTEAKVVIEQWRRHYNAIRPHSSLAYLTPDEFKQRYCSTEATEAVLQD
complement(2015920..2016183)       PROPHAGE_Xantho_306: ISxac2 transposase; DP58_1733; phage(gi21244663)                2.54e-27            BurkholderiapseudomalleiMKKSRFTEEQMVTILREADKAPVAEVAKKHGVSEQTIYNWRQHFGGLEAADVKRLKQLEQENARLKKMLAERDLELDVMKEINAKKW
2016256..2016450                   PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; DP58_1734; phage(gi145708108)     9.10e-37            BurkholderiapseudomalleiMQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAAFPGIPR
2016590..2018437                   PHAGE_Acinet_vB_AbaM_ME3_NC_041884: deoxynucleoside kinase; DP58_1735; phage(gi100082)     5.41e-40            BurkholderiapseudomalleiMSRSLEILNEVFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSEAGRGAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALRDGDIDLLYVAPERLMTPRFLDLLERARIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPDVPRIALTATADAITRDEIVQRLALDDARIFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAGVVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEIRQKHQEMFQREEGVVMCATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMAYGLGDVVQQRKMIDESEADDTHKRVQTSKLDALLGLCETASCRRVRLLAYFGETSGPCGNCDTCLEPPATWDATREAQMALSCVFRAQRASGFNFGASHLIEVLRGARTEKVQQRGHDSLSTFGIGAELSEAEWRAIFRQLVAFGYLAVDHGGFGALVLTEASKPVLKGEEKVTLRRYVKPARTRQSSGRSGARVDPTAGMSARERACWERLRAWRAETAKSDGVPAYVIFHDATLAEIARNAPESIDDLRHIPGIGARKLDRFGDEILEVVESA
2021988..2022067                   attR                                                                                 N/A                 ACGATTGGTCACGTTGACCACGGCAAGACGACGCTGACGGCAGCGATCGCGACGGTGCTGTCGGCGAAGTTCGGCGGCGA

#### region 2 ####
2107096..2107617                   PHAGE_Pseudo_pf16_NC_041881: hypothetical protein; DP58_1836; phage(gi100017)        1.17e-29            BurkholderiapseudomalleiMQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIYARENGQGMAFQVDVAAETGEADGSDALAVAEEGDDAGARHASADGAAEAAPEPGDAAEELPKSDGDGDGDGAKGSRPRLKIVK
2107638..2107713                   tRNA                                                                                 N/A                 GCCGGCTTAGCTCATCTGGTAGAGCAGTTGATTTGTAATCATCAGGTGGCGGGTTCGAGTCCTGCAGCCGGCACCA
2107905..2107916                   attL                                                                                 N/A                 GCCTTATGCCGT
2107910..2108740                   PHAGE_Stenot_S1_NC_011589: putative integrase; DP58_1838; phage(gi213163927)         3.23e-75            BurkholderiapseudomalleiMPLTDVAIRKAAPREKPYRLADSGGMYLEVSPAGGKYWRLKYRFLGKEKRLALGVYPDVSLAAAREKRDDARKKLAAGVDPSEAKKADKRAARLAATNSFEAVALGWMDELKPYVTAGSMAKTKARFEKDVFPWIGKRPVAEIDAPEILTVLKRIDSRGARFTAHKVRGEISRAFRYGIKEGYCKFDPARDLVNAIPPAQTTHFASITEPAKVGAMLRAFDGFSGTFPVLCALKLAPMLFTRPGELRKAEWAQFDLDKGEWRYLVTKTSTEHLAGC
complement(2108890..2109975)       PHAGE_Burkho_KS5_NC_015265: ISBmu23 transposase; DP58_1839; phage(gi327198044)       6.66e-08            BurkholderiapseudomalleiMQEPLFTTVKLEDFVPADHPLRPLRLLVNQALKRLNGLFGTIYADSGRASIAPEKLLRALLLQVLYSVRSERMLMEQMRYNLLFRWFVGLAIEDAVWDHSVFSKNRDRLLEHEVVEAFFTEVMSLADKQGLLSREHFSVDGTLIQAWASHKSFRPKDGSDDPPAGGGRNVDTDWKGKRRSNDTHESSTDPDARLFRKGRQSGAILCYQGHILMENRSGLVVGAVVSHADGFGERASALRLLDCVPGRHAKTLGADKGYDMRDFVRDCRARKVTPHVARNDAHQGGSAIDGRTSRHAGYGISQVIRKRIEEHFGWGKTVGRIRQTAYRGIKRVDQHFKLTMLASNLTRMARILAAVPQGAAR
2110070..2110085                   attL                                                                                 N/A                 TTTCAACAGCCTGCTA
2110188..2110466                   PHAGE_Entero_P4_NC_001609: integrase; DP58_1840; phage(gi9627511)                    1.40e-18            BurkholderiapseudomalleiMSDAAVNAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQLAHAVPDTLGKAYNRTKFLKERKAMMQKWADYLEKLKAKVDLKS
2110463..2111170                   hypothetical protein; DP58_1841                                                      N/A                 BurkholderiapseudomalleiMNERNNNFRSQLGIMARCLELARRLSKRYVMLNPDKPPTTFATELCYWIRGLDDATIDEPLELLNLFLKPNDPAAPLEQLPTDPMVPVILSATFMLRAMAAEAEGQYERGWNNLTDAEYWCGIAQGARHVALVQEEAVADTYTRTSKKAAAARHDKERETMEFARQRARELCPDGGWRRRIAAARRIRDEVVAYAAKLDWRMTADRATDLIDKWLSDMHDAHQLFPTQRRMPKST
2111422..2111634                   PHAGE_Entero_P4_NC_001609: transcriptional regulator; DP58_1842; phage(gi9627517)     9.53e-07            BurkholderiapseudomalleiMLAQAEIKIPVGARVLRIKDVVERTGLSRSTIYVLMKSDPTFPKKVGLSARTTGVIEHQLDAWIASRTIA
2111644..2113182                   PHAGE_Mycoba_Thyatira_NC_051597: capsid maturation protease; DP58_1843; phage(gi100067)     1.13e-19            BurkholderiapseudomalleiMFSSGWRNRRNYASGPVLEVASEIPVLPVIWLWRFWLARGKLHILAGPPSTGKTTLALQVAATLTLGGMWPDGSLAPIGRVVIWTCEDGIEDTIMPRLIACGVDPSRVYVLRVTNENNRTRTFEFTRDLVPLEAKVRELGDVALVIIDSIVQVVTGNSNNNSQVRKDLDPLVKFAEQTNCAILGLTHVNKGSKKKDPLERVNGSTAIGALARLVWIVARDANRVCEGVQSSVLVRAKSNLGPTDGGFAYHVEGVDVPIDAVNITHSSKVVWDEPLRGSPKDILDDVEGASASGREDRKQEARNFLLALLAHGPIPAEKVQEEAKQAAVSWATVRRASDELGVRKYRAMGDTRWYWVLENGSAGGWQHQSGPTSTPGFSAAFDTMSGSAASARTADPFAGYADALLGWRTPSLQSTSVPAPPMREIGEQDAQHEQVEPAAETVGGIDDGLWRFMVNECLARYRAASQPIDADEQVELRTAIVDSVLDTRVEVDDAEWIAAARTSLLTADFWFA
2125092..2125107                   attR                                                                                 N/A                 TTTCAACAGCCTGCTA
2125114..2125125                   attR                                                                                 N/A                 GCCTTATGCCGT

#### region 3 ####
complement(2153626..2154744)       PHAGE_Burkho_phiE12_2_NC_009236: gp8, bacteriophage protein; DP58_1871; phage(gi134288703)     4.92e-130           BurkholderiapseudomalleiMTKDELIAWANDPRRQDTLPFGLYEPLEQKAIVGAALVVRGALYFKGGYTKPVRAALVDCYNRYMAAIDEFAKVFAKAAEQPVPKASPMRWFYEEGQKPVEFAKARGFPAVADTLPSTQVLVATTTSADHKLAAGFFEFSAFCIPDWQAELGDRGLDAMVFSVPRRFLEMCPGTFEKLFAEFAAAVPTIWGHAGIGVNLPPLDPEANEASENFWSRLYGPGIDVGDPMRTSIRDLVDKIKTVDWLTALGGDLVRHIGGADALMLPPDWFRKTPLDRGGMLIQAGVAPTAGVPIGKGIPPAPPAAYVLLNHALRSIVADKSGILQRGTVNSTAPLLNTTVACEAWLQRFNVPDDELNGYWVELHKTQKLSPSS
complement(2154750..2155523)       PHAGE_Burkho_phiE12_2_NC_009236: gp9, bacteriophage protein; DP58_1872; phage(gi134288693)     3.78e-56            BurkholderiapseudomalleiMSGYSGGEAAGGMRTGGQTTVVGARKGITPEDKALLCRVMCNCGKIGVWTRGGGRLQRQKCVEQRIDAENARSIAETGQKTVYVPEINYNMTTVPPSPIMSADDPLEPHDDLLGYIVNSWPGKMKGYLEGKKAGLDQTRRPDVVIVHDPSQPPEQPNIRAVIEMKFEDALTRGQAADYIKIAGDEAKYVPLKKAQCGCPDEDAEKEPAPSTQRSTTSDTDELFGGNAGASHRTGPFGLPPLPPVGPGPATPGIGLPF
complement(2155526..2156056)       PHAGE_Burkho_phiE12_2_NC_009236: gp10; DP58_1873; phage(gi134288697)                 1.05e-66            BurkholderiapseudomalleiMSFAFIREGDSTSHGGRVLACSPENKSDGVPLALLGDKVSCPKCGGVYPIVGVKNLGVTFDGRPVASEGDTTACGATLIASQNNTTAEPTSGGSIGGGKSVRPETNSQSAHSGRFQLLDDVTRRPVAGHSYTVRAADGRTIHGKTDANGFTDWLEGNDASSLTFSHNGTSGPTSTS
2156906..2158126                   PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; DP58_1874; phage(gi145708108)     0.0                 BurkholderiapseudomalleiMLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCERCGAARLEKLDWLGRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRKPAWAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAAFPGIPR
2158413..2158739                   PHAGE_Burkho_phiE12_2_NC_009236: gp37, bacteriophage baseplate assembly protein J; DP58_1875; phage(gi134288737)     2.96e-64            BurkholderiapseudomalleiMRVRPQTDQVIVQSAKVVPYAIRATLRFFSGPDRGVALAEARKRTVKFAADMLRIGMEITVDGLHAAMRVAGVQKVLLGSPAGGVPVTHEQAPYCTGIELIDGGVADD
2158946..2159143                   PHAGE_Burkho_phiE12_2_NC_009236: gp36, phage tail protein I; DP58_1876; phage(gi134288700)     2.30e-34            BurkholderiapseudomalleiMKAAIRIARKKGTAAAVREVCASFGANVAMREWFEKTPKGRPGTFEILMTVGARDGIPATGVTPG
2159243..2159644                   PHAGE_Burkho_phiE12_2_NC_009236: gp40, DNA methylase; DP58_1877; phage(gi134288704)     1.08e-71            BurkholderiapseudomalleiMILRGVAVWDKTLGRMRLRRGGFAQQAEFVVWASRGAMRGCDVYLPGVFPCRLPLPKQHVTEKPLDIAREVVRLVPAGGVVCDLFAGSGTFLAAAREAGLHWVGSESNQAYHAISSARLDATTDDSGVQPRSI
2160123..2160629                   putative transcription activator; DP58_1878                                          N/A                 BurkholderiapseudomalleiMQDAAYCVRAEQDYRLVEARAKKHHEDVLAAFAQARYESYLSYTDSIMKAWHIKDILAINPNDAVKAYVAHEHYVAEFMEPIYGVVAMIPCDRLWSWLAETLSPDNVPNNLYDFWISDNQGWSGTYRLENFVNSWFAAHPKQYEWESALKAYRGSMLGEVGDFRAALE
complement(2160733..2161098)       PHAGE_Burkho_phiE202_NC_009234: gp39, phage virion morphogenesis protein; DP58_1879; phage(gi134288746)     4.03e-69            BurkholderiapseudomalleiMRGAQQSRVAARRNPDGSPYAPRKGKAGGKRLREKAGRVKREAVFRKLRTARYLRTDIDDTGLAIGFDERLSRIARVHHEGQKAPVEPGGPLAQYPVRVVLGFADADRELVRDRLLRPLNR
