gi|00000000|ref|CP008808.1|  Campylobacter fetus subsp. fetus 04/554, complete genome. 1800764, gc%: 33.21%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1117242..1118177)       PHAGE_Natria_PhiCh1_NC_004084: capsid protein gpE; CFF04554_1116; phage(gi22091115)     1.04e-07            Campylobacterfetussubspfetus04554MAKNLRELLKATGTINAVDMYSTSTLRPEVSNKIIKTIIDKSDFLSKVTLDKTKKLSKSFDTWNLASGILVRVNSGDKPTNAQRQKIGVSSVLIENKVVQLFAKITQDTLEDNAENPNFENETFDSFATAFSNDLQNLGMIGSKDDYAESKFENLNKGWFTLAKESTKTKKLEHKAASKITDRLIAMVENANEDVLNQSVIIVSKKDLIAYNKEIGGKNGGLSILLNKGADNILGVPLIGASFVKSGEYMLTPLKNLIFSIGLDIRRQRWYDNEESSLKYKFEVFCDYQIGVPEWVVLSTTNEADSDGDGV
complement(1118177..1118914)       PHAGE_Lactoc_98201_NC_031064: membrane-associated initiation of head vertex; CFF04554_1117; phage(gi100034)     7.30e-22            Campylobacterfetussubspfetus04554MAKRLKDIAITHISLVKEGANGKSVIYKSKDALEDYFRSVKIAKNDTEKGIVYGIVYSPDEIDTQGDAASAAEIEKAAFSFMKGLNIKNVDRDHNFKPEGAYICESWIVKSGDPLFPNEKEGSWAVGIKLESDELKEAVKKGDLKALSMAGTAIKEEDDGLLKSILKGFEAILKGFNAEKNIKEGEQLEREKEVAEVIKGLSSIKEKLDELDSLKKDMNELKNELKKSKQENATQTNENDIGGLL
1119046..1120107                   PHAGE_Salmon_RE_2010_NC_019488: capsid packaging protein; CFF04554_1118; phage(gi418489696)     8.36e-17            Campylobacterfetussubspfetus04554MNRFFIEKDAKQSLQIGEETTSTSGIIEPFFSFNQLLEAYYANVYHRRAIKIKAGLLSQIETEESDLEKFLPAGVSPKNFLNTFAFNLELYGNAAIEKAGGSTSYLFYNLPANQMRLKKDRRLFQKVNEKIVELEGYHFFYYSPNSRYYGEPDYLAALQQILINQKADLYNDKFFDNGARPDLAIIYENAEPSEEQIKAFENFFGSNFRGYNNSHKTLIIYGENSANDKDAKIRFEELGRVSDLSFKELKSVTRDEIAVAHAIPPRLLGIVQGSALGGSGELSGQLQMFNELEIKPKIEMIESFFTNIGVKVTLKAMDTTSFKDDGEIVTTLVGSGILSIEEARSILGWQKNI
1120210..1121781                   PHAGE_Salmon_RE_2010_NC_019488: terminase ATPase subunit; CFF04554_1119; phage(gi418489697)     1.42e-33            Campylobacterfetussubspfetus04554MTYTKEFKEECVNLLKSGVSALALTRQTGVSRPTLAKWLKTYEKENFSIDNAINFTKKKIEELSKNDQTPQGVVMLSELVSALAKLENGVKKVKSIKDKSRPIINMDSPTANELKKRILEHGNLYAYQKEFLQSNDTFRIVLKSRQIGFSYVSSTDALIGAVAGRDQLFLSASEEQALILMRYMRHWAKEYGISFKKDSEHEVVLENGAYIKSFANNFRTVQGFAGDIWMDEFAWYPNSKRIWHAFVPSIGAIKGRLTILSTPFEERSLFHQIYSDKTKFHMFKRFCVSIYKAIEDGLDFDLETMRDLFDTDTWASAYECQFVDDESSLLSISLIKSCVDNKAHYFTPKSSECIYAGYDVGRVSDRSTLAGVVLENGVYKTALMDILAKARFEEQKEHLTSFLKTYPISVLKIDKTGIGMNLAENMHDKFKSRVSGVWFSNTRKEEMALNLKKAFEDKLIKIPNDPLLIADIHAIKRTIGAKSFKYDAKRNEYGHADRFWALALALSHIGVVRAKKSGGAIII
1121778..1122188                   PHAGE_Tsukam_TPA2_NC_015210: tail component; CFF04554_1120; phage(gi326425049)       3.78e-18            Campylobacterfetussubspfetus04554MNKIFKNFMFRVGAEVVNESKAIAPFKTGNLKKDIQVFKADQTNVTIGNSKLAPYAKFVHFGTKPHMIKVKKAKALANKNGKVFGKKVNHPGTKANPYLKNALDSYIKGSAFTRAKTALANEVKNKIVNDIKKAVK
complement(1122381..1123019)       PHAGE_Lactob_Ldl1_NC_026609: antirepressor protein; CFF04554_1121; phage(gi764162128)     1.09e-22            Campylobacterfetussubspfetus04554MNNLAVINNVSVEFSIVGDNVFADTLKIAEVFEKRHTDVLRTIDNLPNDEFKSSNFKYDSYFDKKGEARPMYRLTRDGFSLLVMGFTGQKAYKWKIEFIKAFNKMEAMIKAAKNNDLDLQSKFAEILSALKEKSNEADEYKAKYYESLENEVMLLRQVANQIKKEVIYNTKLSKSEKENIIKLYKSGLSQAEICRQTNRSDAAVRNAIRSAL
complement(1123416..1123640)       hypothetical protein; CFF04554_1122                                                  N/A                 Campylobacterfetussubspfetus04554MADENIIKSTCKELNLTYKQLGEAIGYSESAINNASRQEKISEPLTKAIELYKENLKLQQELADFHTLKAILSR
complement(1123727..1124017)       hypothetical protein; CFF04554_1123                                                  N/A                 Campylobacterfetussubspfetus04554MENRKFTIGYGGIEWDICEKNWEYHDKKSDNNLNNLNRIDDDGKISYIFGILPVFDEDRSYKKLNEICDFEVLASGHKFTGSFIDALEYIKANFKG
complement(1123993..1125228)       PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: hypothetical protein; CFF04554_1124; phage(gi100002)     4.79e-06            Campylobacterfetussubspfetus04554MKYDKNLLSKLLKSKIAKTKSKKEIIDELLRYLDKENQKALKNVLDELFLMIVTRKDDPNLETLIQNKINALELNIPNLDYEMIYEKFADNALPKDKFSPPTFSFDEIDIRSLEVMRKNFYWMKNDYNEKVSSELKGITEKVFNGEIPRTEMASVLKEQFKGVLSANTSYFKGVSDHIISQMQNIARVNQASKYSVAYYKVVARIDGRTSECCKSMNGRIIPASHIEAQSQAIQNAKNIAEKKAAAIWRSEPFYGKILPKNFGLPPYHFRCRTEIVPVWIDEEEIDGVVMKNTSPLNKDEIIKHIDKTGVERVLSKDNYYGKNNHSLQLNKRTSKINIVRALNSINTVAKNANNSYINAFSDNGYFIVFNGDEIVTCFKPNESKKKSFDYFKNASEYDKKEVIKWKIANLL

#### region 2 ####
1583910..1584980                   PHAGE_Pelagi_HTVC008M_NC_020484: hypothetical protein; CFF04554_1595; phage(gi460042594)     3.86e-08            Campylobacterfetussubspfetus04554MKFSLDAHKLHHHLDRVLEFKQTGDCAPIYMEVSPCGSCNHRCLFCAYDYIAYPNRKLDTDNFIKFTTEVAKAGLKSMLFAGEGEPLIHNDIDKMVAHAKQCGIDCGMFSNAALLKADLAKKLLPNLTFLRFSFNAGDSQTYSKIHTSHKKSSDFEKVVENIKFANDYRKEQNLKVDLGSQFVLLKENKNSLINAVKTMKECGVDYISVKPFVLQNENQLYKNNSKFETDQLETLINEAKSYESDDFKVIFRQNAFFKYGQRDYSHCYGCSFITVLNSAGDLASCLPYWDKKEFVYGNINEQSFEAIWGGVRRKRVKELLENKINTKNCPPNCRPNAINEFLNEILNPDVKHINFI
1585011..1586105                   PHAGE_Pelagi_HTVC008M_NC_020484: hypothetical protein; CFF04554_1596; phage(gi460042594)     2.15e-09            Campylobacterfetussubspfetus04554MKDKFRIDSHKLIFHPKRVSNFLDAFGNWEKEKEIYPIYVEFSPCGACNHRCTFCGLDYMGYKNIKISLDVFKKTSKDMAKCGVKSIMFAGEGEPLLHKDLPLMAEFAKMQGIDLGLTTNFALTNTDISKSLLKNFTWIKVSLNGANAQNYAMIHKTKASDFDKVINNLKEAVKIRKENKFKCSIGVQLLLLKENIDYVLDLAKILRDINVDYFVIKPYSQHLFSITKEHNAFQYINLESLANSLDELQNDNFSIIFRYKTMQKKDSNKHEYKKCYSTPYFWAYVSSNGDLYSCSCYLGDDKFKFGNINDKSFRELWQSDKRKQNIDFVQNSLNISQCRVNCRMDFINSYLWELKNPNEHVNFI
1586114..1586875                   PHAGE_Campyl_IBB35_NC_027989: hypothetical protein; CFF04554_1597; phage(gi937456622)     3.86e-05            Campylobacterfetussubspfetus04554MTQAEIRKNILKMANRAKSPHIGSALSCVDILYTLYFKILKLENYEQRDIFLLSKAHAAMALYATLNAKGFMSNEEILGYYQNNGTLPAHTDRFSSPYVEISAGSLGHALPMSVGMAMSIKNENRKVYVLIGDGETQEGSIWEAAMLAPKLNLNNLCVLIDYNNLQGYGRAREITSFEPIDKKWESFGWECVIVDGHDVQALQKAMSIKTDKPLCIVCKTIKGKGVEFMENELKWHYYIVTDEILNSALKVLK
1586872..1587738                   PHAGE_Campyl_CP220_NC_027997: hypothetical protein; CFF04554_1598; phage(gi937457433)     4.79e-06            Campylobacterfetussubspfetus04554MRNTLANEIYKYAAKNKDFFLISGDAGLGVWDEYQKELPNQFINPGINEALCVGMAAGMALSGKKVVYYNIAPFVIMRPFEQVRNDICYQELPVILVGTGAGITYAPSGMTHYSVEDIALALSLPNLDIYSPASPLEAKLAFENALKSKNPSYIRIEKSGEVEIHKNNIDITDLNFIQIGGEDLVIAHGSIVNECLGISNVSVATAPFINSANKNIIDQISKFRNIFVVEEHFKFGGLATFLQSKTDKKIHSIGLKNHYIHDIGDRKFLRKLYGLDKSAIEKQIKENI
1587735..1588394                   PHAGE_Pelagi_HTVC008M_NC_020484: methyltransferase; CFF04554_1599; phage(gi460042595)     3.22e-09            Campylobacterfetussubspfetus04554MKELDIFTNLHKKTSREYLPRMCDDKVNCMIKAKEFEADFWDGDRKFGYGGYKYDGRWEAVAKKLIEIYGLKDSDKVLDVGCGKAFLLYELKKLLPNLQITGFDISKYALKNAKEEVKDCLFYHDAKDDFPFKQEEFDLAISLTTLHNLKIYDLKNALQNINLVAKNKFIVVESYRNEKELFNLECWALTCQSFFSKDEWEWLFKEFGYNGDYEFIYFE
1588448..1589509                   PHAGE_Pelagi_HTVC008M_NC_020484: hypothetical protein; CFF04554_1600; phage(gi460042594)     6.21e-12            Campylobacterfetussubspfetus04554MGLLYTKYKMFHYPKKIDSLNTDEILPPLQVRIKPTNACNHDCWYCAYKASNLQLGKDMIVKDYIPKDKMFEIIDDLDSMGVKSITFSGGGEPLSYRYMTETLEKLSKTNIKFASLTNGSKLNGDIANLFSKFGTWLRVSIDGFDDESYAKYRNVKVGEFSKVIKNMSEFSKLGGECLLGVSFIIDDKNYSHIYDVLHLFKDIGVRSVKLSPCIVSNDAAKNNEYHSKIFDNVQKEIYKSMNLTDGNFEIYNSYHLLDTKFKKDYDWCPMLQILMVIGADQNVYACQDKAYNLDSGLLFSIKNRSFKEAWSADKSSFYKIKPCEVCNHHCVSNEKNKILLEYLGADKEHLGFV
